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# Syntrophus aciditrophicus SB

>SYN_00599 Ni2+ insertion GTPase
MKVTVVKNVLDANERIANDNRGLFDRKKIYVINLMSSPGAGKTSLVEKTI
LALKDRYRIAVIEGDIQDTCDADRVSALGIPAVQINTGGACHIDGNMIRD
ALPALNLDEIDLLITENVGNLVCPAEFKIGENAKVMILSTPEGADKPAKY
PLMFQESSVLILNKMDLLPYVDFDLERAKRTALSLNRDLKIFEVSCRNDE
GLEGWYSWLAGQIEAFRNS
>SYN_03008 rrf2 family protein
MSLELFKLMENTTLEFFLDRINLISIISTKSVEILYIKSGQIMKLSTRGR
YGLRFMLDLAVHYNEGPIFLKDIAQRQGISEKYLWQLIHPLKTAGLINST
RGAHGGYQLAKNPEDITLKDIMQVVEGPLCLVDCVDNASICERASTCITR
NVWQEATRVILKTLESLTLETMVKRQTEKEKQAT
>SYN_00796 ribonuclease III
MTEERQTALKKLESHLSCAFRDITLLDNALVHRSYVNENPSLSFADNERL
EFLGDAVLELCISDLLMKAFPDYSEGQLSKLRASVVNEQPLAELAKKCRI
GSFILLGKGEESSGGRSKPSILANTMEAITAAVFLDGGFDRAYEFVRRLF
TPLIEEGNRSATYKDYKTTLQELSQNRFREIPRYRLIGEYGPDHDKLFES
GLSIPGIIETTGKGKSKKEAEQHAAHKALDELLKNTHEGE
>SYN_00427 ATP-dependent DNA helicase
MESSNTAHQQKTKWGNKRFSSDRETGTKQGRERRRRTARSARMHPAIEPV
LKGVFKRIGKPPESGFVPDEFQLQALEAIKKNDCLVMAPTGSGKTWIAEQ
AILSVFRAGGRCWYASPLKALSNAKWVEFSQNFGAQHVGILTGDTKENPD
APIIVGTTEILRNQLYDVMKEGENLRCDLVILDEAHYLGDRDRGVVWEEI
MIYLPVRVNLLLLSATIGNGDEIAAWLSSHRNKNCTVIREEKRPVPLFPL
FLHPSGRIMPLMENRKLYGKVAEYIVARKTRRSGSFASLHFGEIINLMEG
YALLPAIFFLKSRAECDAALKSCAGLAERCADERFYYDLEELLSRFPFLR
QHRQLSFLIDYRVASHHGGQLPAWKFFVENMMKKGHLRAIFATSTVAAGV
NYPARTIVLFNSDLFNGHEFCPMSGTEFHQMTGRAGRRGLDNIGFMLAVP
GRFMDLSHIRKSLFQPPDEILSQIRSDFSMVLNLLLSQTPETIRDIFEKS
LASYQHQNLNLWKEFLRHLEFLKAEGFVDDQDRLTENGIWASKLRLDQPL
LIAEGLRAGGFPSADEKLLAALIAPFVNDHDQEILMDKRFISRKLRRAFT
RLVTMLGPLTERMKAAGFPVQPLYFWTSAVVYEWASGEDWDEIIKRTGIA
DGELSMLVLRVADNLRQIVSLRDTHPEMAHLAARARDAILREPVVFEWEG
>SYN_01358 hypothetical membrane protein
MRSYDLTDFLTTSALLNYQLSAKQLNWGSIMTVVLEGKQIADHDQEILLN
VFDYLSKVYGKMKRALGPLSVLHPLRATALLSHASKEVALLDVITCLLHD
TFEDFKPSQFKDSDWIKLDNTFQAFLSELPEDHQKRLKQQLQWLTKEPSE
TYYHYIGRLLDQAGETSEVVRVKLADRLDNTFDMRIELQDPLLGVDFFEI
IFQMAFTNTCRGYRPDRPHQPTVIMNGADRLYQLFKNIVLMSLIRQKKAG
AGDPVTQELFEALAKASMKEAQRIALHVFGYHEPDVAKFRKLLMETMVYS
QSGGFDTVTLPNEASRLNGLLMTVFDQPKREARKKQLVALYRDKAFMIQV
AISFVIIFLNFLNDPDYFIHGISANGVRPES
>SYN_01725 transcriptional regulator, MerR family
MDAVIPPEKAYFRISEVSKILGVEPYVIRFWESEFKSVRPIRTKSDQRLY
RRTDVQELLTIKVLLHEEFFTIKGAKRQLLLRKAARNSSIRETNLREKLN
AVRKGLLQIQALLKTSNKAE
>SYN_00717 transcriptional regulator
MITAITGEQMPIPIPGRPVRGSKTGVPIMALFDLLGRTWAMGVVWQLQNG
PYTFRELQEKCESISPTILNSRIKELRKADIAERTIRGYQLTEHGHQLIE
LIRPFGEWSRKWAKEVFNYKEDNSN
>SYN_00542 transcription elongation factor
MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTA
AKEKQSFLHGKLQELENNLALSNVIDLKMLSDDRIVFGATVIIEEASTGK
QTNYQLVGPFESNISENKISVTSPIGKALIGKSIGDEVKVHTPGGIRNFE
VVDIYINPSEL
>SYN_01437 cold shock protein
MAVFLHSGCRTSGQNLREERKREAMPEGKVKWFNEQKGFGFIEKDEGGDV
FVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVNVKPI
>SYN_01852 snf2-related protein with C-terminal Helicase
MSDNRLVSQIGQRVMLPGHFDVPVVLEDARPLGSGDSAGYECRVRLPDGS
LEEAVISAEEIASILGRETVKAESMTPVDAEKLRLLIESTRIRLAYAHDQ
QFAVSLSGIRTLPHQIEAVYRAMLPQPRLRFLLADDPGAGKTIMAGLLVK
ELKLREAIERILILCPAPLTIQWQDEMLRWFGEPFDIIFSAVDQQQLTNP
WQRSSQIIASIDYAKQEDVRERVWQQRWDLVIIDEAHKCSARTASGGQNR
ESKVTTTKRYDLALHLTYQADHVLLLTATPHHGDEDKFAHFLRLIDPDLF
PEPHRLGKQASAIRKDVFRLGKDSPWCLRRLKEDLRDANGKRLFPDRHTK
TVTFRLNSDEYTLYKSVTAYINEFIPQQTGQRRSSAALTRTVLQRRLVSS
TCAIHESLKRRLKKQEDLLEELEGLTPSQRAKRLAALQGRLPDAEQDEDD
LDDAVRDQLADEYTAALELEQLRAEISALRELVEQARRVREDANDSKLAA
LKKCLGEAQFLELKDGRGKLLIFTEHRDTLGYVRDHLERWGFSTCEIHGG
MNPHERKRAQEVFRTGAQVCIATEAAGEGINLQFCHLMINYDMPWNPTRL
EQRLGRIHRIGQDRDVYAFNFVATDSEDGQPIVEGRILHRLLEKLDQMNE
ALEGRVFDVIGEVLSLNDVNLPDMLRDAAYDPRRLDEYLDQIDRINPAKL
KEYEEATGIALARSHVDFSAFQRRNLEVEERRLMPRYVEAQFVSAAREVG
LRVEPRADGLWRIEHILADLRSERLRSVQKVGKAESSYRKITFHKHHLEK
DAHVDAILMGPGHPLYAAVDEKLNERLMELVGGIGFFVDPLCKEPYRIHL
FEISIRGKDSKGSDVPLYGELVAVREERGNYEVIPSDILLNLAAHPHPPQ
EIEATSIQGATDFLKRTYQLECRARCQAERQHFAQVCREYLEKSFKARID
RAQERAMLLAAEVFSKPEYKLPADEARKYVDELQRARQERLDGLKRLEIA
RTGPVKHVGTAFILAPDADTQAQLADLTDELDPNIRRQSEIAAEDKVIEA
LVAEGFPQDRIERVGHLKLGFDIRAHRIADKATGEVFVKRIEVKGRLRGQ
PVRLTTNEWYKAQQLAETYWLYVVWNPLGDSPELVRIHNPVAKLDHAKRE
IVAARFYEIPAEAVMSIVHIDSEKNPML
>SYN_02693 acetyltransferase
MQEIVALSRDHDRSRFDCGVPELNAFLKATARQHIEKGISRTFVLTDQER
PAVISGYFTLTLCEVRVDHLPAEYAKKYPQHGLPAVRLAKLAVSKKHQGR
GFGSLLLTEAIHRTVLIAEQAGLIGLFVDAKNKQAQSFYEYFGFIPLSNQ
TLQLFLPFATLEKLNKK
>SYN_02755 transcriptional regulator containing an HTH domain
MLKIELLEIIAAGENSGIEFKRDDVRPEQIAREIVAMANLKGGRLLLGVD
DDGTITGIQRPKTEEWVMNILATKIHPMLLPFYEEVVLDNGKRVAVVTIS
EGPSKPYVLRHEGREEIFIRVGSTTRRATREQQARLHEMGGILHTELLPV
SGAGLNVLDRQRITDFLQHILQDAILPKSDTEWSQRLMALGFMTSGPGGI
PVCTIAGLLLFGFAPRSFLRQAGIRIMIFEGSEKAYHALYDRVIDAPILP
LWTTSNENGRVQAADGLLEIVNSIIQPFISEESSKINVAFRKEVSQRFSR
EVIREVLLNAVAHRDWTRFTDIELVIYADRLELTSPGPLPNTMTIEKMIA
GQRSPRNPLLVDILRDYGYVDARGMGIRNKVIPLVRKMTGQDPIFEETDD
YLKTIIPAAGVSK
>SYN_00562 acetyltransferase (GNAT) family protein
MADEIEIKELSLEYYPEIVEIHRAIMKGKVSPSWMKSIKRHLREKDVGGY
VALKDGKVAGIIIGQIQGPSFGLEKSGWVTVVEAHPQFMGSGVGRALVES
IFQYFREKGVKDIHTAVKWDAVDMLSFFIAAGFGRSAFINLRIKLDDVIP
D
>SYN_01798 transcription termination factor rho
MNIEEIKRQPINELAHLAKDLNVPGAGGMRRQDLIFAILQAQAEKNGMIS
GSGVLEILPDGFGFLRAVDYNYLPSPDDIYISPSQIRRFNLRTGDTISGE
VRPPKEGEKYFALLKVDTINFEASELARDKILFDNLIPVYPHDKLNLESN
PENYSTRIMDLFTPIGKGQRGLIVSPPRAGKTVLLQDIAHSITANHKEVI
LMVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVQVAEMVIEKAKRL
VEHKRDVVILLDSITRLARAYNTVVPPSGKVLSGGVDSNALHKPKRFFGA
ARNIENGGSLTIISTALIDTGSRMDEVIFEEFKGTGNMELHLDRRIADRR
VFPAFDLIRSGTRKEELLTPKENLNRIWILRRILQEMNPVDAMEFIIDKM
RKTETNQAFLDSMNQ
>SYN_00341 transcriptional regulator, arsR family
MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKR
LEEAGLIDSRREGKWINHYPADGKDSPYAATLLGNLRHWLEDDAEIRQLI
EKIPCIRREEISCHKEEVCEESGY
>SYN_01678 acetyltransferase (GNAT) family protein
MKNGIEIKELALEYCPEIVEIHRAIMKGNISDTWRKSIELHLQKKDVVGY
VALKDGKVVGFIIGEVKGPSFGLEKSGWIIGLEAHPQFMGTGIGRVLMDS
IFKYFREKGVRDIFTAIRWDAVDMLSFFIATGFDRSEFVNLGKQLDNVKT
E
>SYN_00347 transcriptional regulator, ArsR family
MEQFTRMYKALSEEMRLRIVMLLTHGELCVCELMSIFDESQSKVSRHLAY
LKNSGMVQSRRVGTWMHYSLREPLGSAMNAQLIFMKQQFTEFPVFREDVK
KLDDIKKLNICG
>SYN_02430 ATP-dependent RNA helicase
MSFTQFNLHPQINAGIEALGYKTPTPIQMQSIPAIIQGRDVMGLAQTGTG
KTAAFALPILQRLMNGPGKMVRALIVAPTRELAEQINESINEMSRSTKLK
SVALYGGVSKNPQIEKLRQGAEIIVACPGRLLDLVAQGVADLSGIEVFVL
DEADRMFDMGFLPEIRKITKQLPEKRQTLLFSATMPADIRSLAKDILHDP
LTIRIGNDIPVSTVSHTLYPVEQHLKTALLIKLLKETDTESVLVFARTKH
RTTRVAMQMKKAGFPVSSLQGDLSQNQRQTALNGFREGKYRILIATDIAA
RGIDVTRISHVINYDMPDTVEAYTHRIGRTGRATKSGDAFSFVTSEERDL
VDSIEYVLGKQIARCTLEDFDYSRPAPAGSGRVRHPMRMPAISELPTRFR
SSTPVKKTASYHMSPGASGRRSR
>SYN_01508 transcriptional regulator helix turn helix
MQARMKKPLTETVALQFIGPVMNMMKAIEALKSLGFVDLSESVPWREAFP
EYEDKDLPVVCLRALRAKENLTQKQLAELIGIPQRHISEMENGKRPIGKE
MAKRLGKALNVGYKVFL
>SYN_00997 carD-like transcriptional regulator
MFKVGDLAVYPAQGVGVIEAIESREVMGSTQKFYIMKIMSNGMKIMIPTG
SAESVGLRELILEDDVPKVYEILKNKDITIDKQTWNKRYREYLEKIKTGS
VFEIARVLRDLLILKNDKNLSFGERKMMDTAKSLLIKEISIASNAEETKI
EQDLKTIFSLQ
>SYN_01789 transcription elongation factor
MVPELKRLIEQMGKDRGLDKSVIIEALETAMLTAARKKLGAHVDIEAHYN
DELGEIEVFQFKTVVEKVVDPDMQISIEAAHRDLDEEAEPGDSLGMKIDA
STFGRIAVQTAKQIIVQRVKDAERDNVYDEYKDRKGELVNGFVQRFEAGS
IIVNLGRAEGVIPVSEQIHREVYKRGDRIRSYICEVKKVSKGPQIILSRT
HPNFLKALFEVEVPEIAEGLIEVLGVAREPGKRAKIAVRTKDKDIDPVGA
CVGMRGARVQSVVQELRGEKIDIIPYSEDPSQYVISALSPAKVSHVTVYE
NEHAMEVVVPDDQLSLAIGKNGQNVRLAVKLTGWKIDVKSESVDAGSENA
DYRTLLKIPGMEEAMAERLFNKGLKSVAMVAAADPEMLSAIPGVEERTAT
LWIEEAGRIIDEEDAASKTM
>SYN_02369 regulatory protein
MKCPFCGGVENKVMDSRVSRDGNAIRRRRECLACGRRFTTYEYIEEMLPT
VVKKDGRREPFDRNKIRMGIRKACEKRPISTETIESLVTEVERFCQDYSG
EEIRSSMIGEKIMKLLKELDGVAYVRFASVYRQFRDVNDFLEELKEFKQL
HDLKKEKEP
>SYN_00359 DNA polymerase V subunit
MKEKRTIPSVKKQIAGFFRERKRMPTYEEMVALLGVRSKSVVHFWINKLV
EAKILEKDRGGHLAWKERPFSIPMVGEVAAGFPSPEEEELRDILSLDEYL
VARPDASFLLQVSGDSMTGAGILPGDLVIVEKGREPKNGDVVIAEVDGEW
TMKTFRKEKGEVYLEAANPKYPIIRPRQELKLAGVVTGVVRKYHL
>SYN_00034 response regulator with a winged-helix DNA-binding domain
MGILPSRGNWNLGIEDRNPLNLNKREISMKILIVDDDPGTTDLLEISTSL
WGYYPGKAGRADDALELLNRNSYDILITDAEMPGMSGFDLCRTVRSRFPH
MFIIGITGSLDFRKFEEAGADTFFRKPFKLDDLHAVLRNIQPAFESG
>SYN_01919 sigma-54-dependent transcriptional activator
METTSRQMDVLLTSSMPLSDKDKLLKTLFRISSLIADPSNVEEIMQKILD
DVVDALGFDQGIIRLLNDSKQYLETKVVKNYNPEEKKRAFTVAIDLTDDC
IGSKVFKSGKAMVIEDVSTDTRLTATDRILTRIHDQGSLFCAPLKIGDEV
FGTAATWCRQKTRFFPEMMDLFLTFANQMSIIIYNAQLFKNNAEKIRHLT
VLGKAVSEMNSSYVLDNRIRDILISSALDIAGAPKIIFYLIDHDQKRYLV
YDGKQMSIEEMQIRNKKIEQSIISRAIESNVIVVKHPSSEEDGFFPIFKD
HHSEIAIPMRIRDKFRGALYLARVRNLYTPDQINILDILVKNACTAYDNA
IMHSLLSLEARTLKTEVEKLKEREDILLGFDNIIGKSSKMAGIFHVIKEV
AGHDTNVLIQGESGTGKELIARAIHRQSNRSGKAFVDVNCAAIPGTLLES
ELFGYEAGAFTDARKKKIGLLDYANGGTMLLDEIGDMSFPLQAKFLRVLE
EGYIRRLGGTENIPVHPVNEYL
>SYN_02801 response regulator with GAF and HD domains
MMERALKIENYSTDQKRILIVDDYPQLRTVVKEALEREGNYEVNEAENGL
EALKLLQNADYDMIISDVMMPGMGGIDLLKSIKEVRSNAVTIMITAYPAV
ETTVSAIKKGAIDFIKKPFDIDELLFKVNLYLRKKQTVSNRESEKDIKHF
FLGDEPDELLLYNYIYDAIENSFGDNNFIFENVVELAMQIVGGKDCALLL
YEEDEQQFHPQIISGIDPETYNLKILPHISDIFKEVADAKGAVVVHSDEN
PGVSPSLICAPLMIRNKVFGILSIRKKGRGERFSKKELNYILILTKRSSL
NVENKILYESLYRSLLDTFKSLVASIQVRDSYTEEHSCRVTELAVNVARS
MGCTSEDIESIRIAGMLHDIGKIAIPDRILLKPDKLMDYEYQVIKSHPGI
GERILKPVMLLEKERKIILHHHERYDGKGYPNGLSGENIPFLSRLLAIAD
SYDAMTNNRPYRYAMPIDDAIGELRKNSNQQFDGHIVECFLQNI
>SYN_02759 transcription-repair coupling factor
MRKIISLQRGPAAPVLRMLRERIEGGVERLSVNRLHGSANAFLIAALSEQ
LGRPLVVLSPTEKEARETFQDLSLFLGSGKVLLYPPWDIQTTDMFALQRD
VELVRMEVLARLLTDEPAVIVASLKALMQKVVPRSILDAYLEILAPGSEV
PRDELVAKLVAGGYQRMTLVEDKGEFSLRGHVLDIFPPLEDSPLRLEFDG
DDLESLRAFDPASQRSTGRREAFVLSPAREVILSEERRQRALQNIRYRAA
ALELPRNVRDRLSETIDAGLSTSFNPLFLPLFYESLAPTSPDSPTENATA
TQAVRLGTFFDYLPGNCFVVLDDALAIENAGERIENEIDRCLLKAEREGK
FYLEREASYVTKDAFIKDLRRFQRMILEGLALGRLTEYASGNGEKTQASQ
YESLPLPLATDPELGDLHRGPGGEETLLAPLVEHIRRWLQEGMLVAFLCS
GKEDLQRMRHLLGNYELPVRTPEGSLISEAFLHSGPGVLSLREGRLSRSF
LFPDLKLAAISEEELFGKKITGRRIRSAREGYFLRSFGDLKEGDYVVHKE
HGIGLYQGLQKLSVGGIENDFLLINYQSGDKLYLPIDRLDQISRYIGPEG
YVPKVDKLGGTSWDTVRERVKKSIQEVAEELVAIYAAREVMERRSFAPPD
AVYEEFSAAFPYDETPDQARAIEDIHADMNSAKPMDRLICGDAGFGKTEV
AMRSAFRTAMDGRQTAVLVPTTILAEQHCQTFSSRMKDYPIRIEALNRFK
SKAEQSSVLEGLRKGQVDIVIGTHRLLQKDVTFKNLGLVIVDEEQRFGVA
HKEKLKKLRTLVDVLTLTATPIPRTLHLSLVGIRDLSIINTPPEDRQTIK
TYVLEFNEETIREAIRRELARNGQVFFLHDRVRSIYTMARLVEKLVPEAD
IGVVHGQMKPREIEDVMGRFLRKECNVLVCTTIIGSGLDIPTANTILVNR
ADRFGLAQLYQIRGRVGRSSEEAYAYLLVPKGVLLSRDAQKRLQVIMDFS
EPGSGFRIASSDMEIRGGGNLLGTSQSGHVSAVGYELYTELMEQTIREIK
GETIPEEEIVPEINLGLPAFIPEEYMADVHRRLVTYKRISMADSNEELEE
IRDELADCFGYLPPEVTNLLEVIRLRNRLKAIRVKKMGYDTKQMFLFFSA
DTPVEPERILSLARKKLKGLRLTPDCKIYIPMPGLKGSEILEKAGEVLRL
LS
>SYN_02743 transcriptional regulator
MTEKADGKARIVRLGQILRIFMEKEKVSSTWLSRQFQTTPRTIQRDLLLL
KKSGFPLHEIRKGIYQLHKDLVRNLEVFDDTELALVVALKNIVGQLGRPF
QTAAGNILDHLYDCVKSMPVFVKIDDAVPLDSALLNRILQAILKKRTVSF
QYAAPHGSHAVNLEPYRVVYFSGFWYLIGNEPSTGILKRYALDKIENFKS
SRQCFTAIPSDLDDVLRQSANIWFTEDANIEITVHIDARVSDYFKRRKMY
PTQEIKEERPDGSLVVTFRVGNYEAIRDILKSWIPHFVILEPEDFRVSML
NDIKGWVEKQEQQSCLDNISF
>SYN_02076 transcriptional regulator, tetR family
MKNTGKREEIVQAALELIAEKGFHGAPMAMIAKKSDVAVGTIYRYFENKD
VLIDALYHELEDKILAALREEYSVKKPFRERFLHLGTTLLRYFITYPLHF
RYLEQYHNSPYGTSRRRDRFLGKINNRDIVTELFAKGIAQQVLKDFPCIV
LFALAFGPLVTLARDHILGFVVLDETLITQTVEACWDGIRR
>SYN_00093 RNA 3'-terminal phosphate cyclase
MIEIDGSQKSGSGTIVRDAVSLSALAGRDLHLTNIRAKRRPKPGLRAQHL
RGIEAIAELCRGRLEGAAISSGEIRFFPGQTIRGGRYDWDIGTAGSTTML
VLCVLPLALFADGPSLFRITGGLFQDFAPSVYSLQTVLLPLLRRMGAQID
LRIMRPGYVPQGQGQITVDVTPLKRPLKPLILTAQGNLLEIRGIALSSLL
KERQVSERMAEECRKTLQAEGHDARIDLLYDTAGNPVYEKSAVQAGAALA
LWAKTDTECLLGADRAGAPRRSSETIGRQVARMMTETLQTGATLDVHAAD
QIIPFAALAEGESSFVIPRMTDHIDSRLWLVETFLGAETELRDRTLRIRG
IGYRR
>SYN_00019 cold shock DNA-binding domain
MIIPLQITAQGVELSDEIRDEITERANKLDKFYDRIMRCRVVVEEPKRHP
NEGKLYSVHIIMTVPGGEIVTKRERNEDLWVAMRDSFQAAQRKLEDFSRE
QRGDVKTHEKQPRGRISVIFPDQGYGFLVHPEGYDVYFHANSVLNRDFDK
LAVGMEVRFNEEMGDKGPQASSVIVL
>SYN_02265 transcriptional regulator AsnC family
MDGIDKRILNMLQTEFPVTPEPFRAVAERLGISEGEALTRIARLKDEGII
RRIGAVLDSGKLGFVSRLCAASVPGEQVDSFVECVNALEGVTHNYGRNHA
CNIWFTLIASSEEDLEKTIARLSEDTGIGPVQMFRAVRTFKIDARFLLDE
NLPEDRK
>SYN_00904 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
MLRITDILDKTQEYLTPIEQELIEKAYIFSASVHQGQVRLSGEPYMTHPM
EVAGILSDMELDAATIATGLLHDTVEDTLTTLEQIEELFGKDVAFLVDGL
TKISKITFSSQEERQAENFRKMILAMSADIRILLVRLADRIHNMRTLEFH
TPERQKYIAKETMELYAPLANRLGIYRMQVELEDIAFRYLDYESYANLSR
RIALKREKRDEYTEEVKSIIQAKLDEYGMKGVVEGRAKHFWSIHKKMHEQ
KINFDEVYDLTAFRIILDSDKEKDCYEALSIVHSLWIPVPRRFKDYIAMP
KANNYRSLHTTVIGPYGQRVEVQIRTREMHEWAEEGIAAHWRYKEKRSLP
GDDEEQIRKLRELLEVQQELKNPREFMSNLKLALFPDEVYVFTPGGDVRS
FPKGATPIDFAYSIHTDVGHQCIGAKVNRSIVPLKYELKNGDIVEIITQA
GHHPSKDWLKHTVTSRARSKIKNWVKAEESKKSISLGKDLLEKEFRKHSL
KFSSIVKSDEIRDLYNELSVNSLDDLLALVGYGRVSAKRIVNYFVHEEIG
VSEKPPDETISRKGKRDASQGISITGIEDIMVRFAKCCDPIPGDEIVGYI
SRGRGVAIHTVDCERLQELDSERIIDVSWSAKASQTYSVNMVVTCKDQKG
ILAEISSAISSLDVNISSARVETRKDGRVICFFRIDVTGLRQLNALTSAI
KQLKDVISVERVHQTKEQPRPSD
>SYN_02827 RNA polymerase flagellar sigma factor
MKKILSTMKAGASVSSGKKSWVMNADKKDREALILKYLPFVKAVVGRMAS
KIPIDAGDKEDLIHVGIIGLMSAIEKYDTRRNVRFETYAGIRIRGAVLDE
LRARDWVPRAVRSRDNEITKAISSLQKILRRAPDDHEISEYLGLSIEEYF
KLLDDSRCISLISSEDLPGDYLDRYSCSDVIRAVEQGSALDLITDHEFRM
QLKKAMELLPDKERLVLTLYYYEELTMKEIGKVLDLTESRVCQLHSQAIF
RLRAAVKKINL
>SYN_02071 swf/snf family helicase
MNEQQQSVAGSRKREKLSSLYEGLSPGEQILVQFCSLFMEPVSMTTVIRC
FDVTGIAFAGLGKTSWQNLQPALKRIVKLGLVDDHYQCPESFREIATRRA
VAEGHFEKMARSIQRLMPGNRYLSRYSPEYDWRRVLRDFRIAFYRQDSRE
VKTLYDSMLRFCPMPYRTPDPFLRVCNQPFDRVWFGTLPLDLRSAALSRI
LLQSLIFLEPDEAPLNEALDLVSGDRLTEQGGLPLPEVLALRPLLHILIL
RLLLGGRLADARQLLREIGRREEGYTGGLQGCLYFLEGKNEEAIAATESD
LRLLARKTGVRNNFFTDPVGLFFLLALLKAYAAQPDAAGAAKLKKYLYLT
VHRNNPSNFYVTSLTALRKIAAALMMEPEYPDYDSLPERPEIGTVFAALA
EFWQKRRLTSKTITSLQTLYQRARGNGMAWAMMECAGLLTAAGVNPPLYR
QQAEEISAGAGLVSLIPSIHFEEPWRKSLRALTQTAAMERPSIVSKEKRL
IWLFLYGEEGLSLKPLEQRQKARGGWTSGRPVALSRLHKGTNLEYLSRQD
HMIRATLKAEARYYGGYSGADYYFDWEKTLPLLVGHPLIFSEENPEKPVE
FLRGEVELMVTESTEGLCLRLSVPLTESRVVLMPENPSRFRICEISDAHH
RIGQILSSKGLIVPAAARNELMAAMAELSSLVTIHSTIGGSAESLEEIEG
DPRPVIQLAPAGDGFHLELLVRPFGSGGTRLKPGKGMEHVMADMDGKHLL
ARRDLALEIRNVKLLEDRCPTLFMVMNDRGQGYLENPEDCLDLLLELNPL
QEAEEVVIEWPEGESLKTPQQASFEQMRLKVHKVGDWFELDGQLQLDEGL
VMDMKTLLELVESSPRRFLPLGEGRFIALTEALRRRLDEMNVYADRRGKT
VRCHALAIPVLDGIFDDFTQVNRDSSWKERVKTFQKGMTLQPVVPSTLQA
ELRDYQVAGYEWMIRLSSWGAGACLADDMGLGKTLQALAVMLERGPKGPT
LVIAPTSVCMNWQAEINRFAPTLNPVLFGGRNREERIGKLKGMDVLICSY
GLLQQESELLATAHWHTIVLDEAQAIKNFETQRAQAALSLKGDFRLITTG
TPIENHLGEFYTLFDFINPGLLGSRPQFNERYAIPIEKNGDREARKRLKK
LISPFLLRRIKSQVLDELPPRTDVVLQVEMSPEETALYEAMRRQAVETLE
QNDSPVGQKHLKILAEIMRLRQACCHPRLVVPDSELTSSKLALFGEVVEE
MLENSHKALVFSQFVSHLALIQDYLKQKGIEYRYLDGGTPPKERRREVEA
FQAGKGSLFLISLRAGGVGLNLTAADFVIHMDPWWNPAVEDQASDRAHRI
GQKRPVTVYRLVTKNTIEEKILKLHASKRDLADSLLDGSDISGRMSADEL
FQLIREG
>SYN_00795 radical SAM superfamily protein
MKESEFSVASPLIIPVFLPWQGCRQRCIFCNESITTGTFPAAFSEAAFEK
TVTLYSENQKRGKSPVQIAFYGGTFTGMDRKEQTRLLQLAEPYIREGRVD
SLRISTRPDEIDEDLLDFLRRHGVRTVELGAQSLVEEVLRHSRRGHTVGD
VFSAVERLRRKGFEVGIHLMMGLPGDSPQFFAATIDRTLDLQPDTVRLHP
TLVFRNTVLATLYARGQYSPLSLNEAVGLSRYALLRLEKGGIPVIRLGLQ
STPEMELPGNIVAGPYHPAFRSLVNAAIFRDMATTLLSEARSEGRAVSFF
LSPRDVSDFRGHKGENLSLLAERFRPLKIEVTNDPDYTRGWLTLRIGDRS
ISMHRTGLRPILS
>SYN_00063 DNA-directed RNA polymerase beta' chain
MEDVFSYFEKPKDPIRFNAIKISIASPDKILSWSYGEVKKPETINYRTFK
PERDGLFCAKIFGPVKDYECLCGRYKRMKHRGVVCEKCGVEVIKSKVRRE
RMGHITLATPVAHIWFLKSLPSRIGNVLDLTLKELERILYFESWIVLDPR
NTPLRKKDLLSDEEYNDLREQYGPDGFQAGIGAEAVRKLLEEVDLEGLDV
ELRDELKTASSDTKRKKVIKRLKVIEALRKSGNRPEWMILTVLPVIPPDL
RPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPEIIIRNEKRML
QEAVDVLFDNGRRGRAITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDY
SGRSVITVGPDLRLHQCGLPKKMALELFKPFVYNRLQEKGYVTTVKSAKK
MVERETAEVWDALDEVVREYPVMLNRAPTLHRLGLQAFEPVLIEGKAIQL
HPLVCTAFNADFDGDQMAVHVPLSIEAQTEARVLMMSTNNILSPANGKPI
IIPSQDVVLGIYYLTRSKEDVLGHGMSFSNPEEVRSAFDAGAVELRARIK
VRIDDELKETTVGRVILYEIIPEAISFDVINKVMNKKELANLIDYCYRLC
GEKTTVILADRLKDMGFKYATHSGMSFAVRNLNIPKNKKDIVVRADRDVL
EIQKQYMDGLITDGERYNKVIDLWAQATEKIASEMMGGIETEEQITTEGK
KVVESFNPIYMMADSGARGSNAQIRQLAGMRGLMAKPSGEIIETPITANF
REGLTVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDCIITQQD
CGTVDGISVSALMEGGEIIETAGERVLGRVVLEDIMDPFTGEVLVGANQE
IDESLSEKIDRAGIESVRIRSVLTCKAKYGVCARCYGRDLGHGHLVNIGE
AVGIIAAQSIGEPGTQLTMRTFHIGGTAKFEEHSTLDSRHDGIVKYVDLN
YVVSKIGETVVMSRHGEIHVLDEQLRSRGKYTVPYGAHLKVKDGQSVKRG
DRMAEWDPFSIPILAEVDGTVKFGDIIEGKTMQEQVDEVTGLSRKVIVEF
KGADLRPRVSLKDATGKTAKVPGTNAAARHLLSVGVNIVVSEGDQVKAGD
IIAKIPRETTKTKDITGGLPRVAELFEARKPKDFAVISEIDGVVSYGKDA
KGKRKVIVTPEIGDEKEYLIPKGKHVSVQEGDRVIAGEALMSGVNNPHDL
LMIKGEKALARYLVDEVQEVYRLQGVKINDKHMEVIVRQMLRRVKVIDPG
DTPFMADEQVEKFRFQEENEKAIARGEQPAIGEPVLLGITKASLSTQSFI
SAASFQETTRVLTEASLAGKVDYLRGLKENVIMGRLIPAGTGLVMYRKLG
IKTVADEDAESVEIEGDENSNKKSLDMHAAN
>SYN_02432 cold shock protein
MPEGTVKWFNDSKGFGFIEQDGGKDVFVHHSAIQAEGFKSLSEGDRVSFD
VVVGKKGPSAENVRKV
>SYN_02737 hypothetical transcriptional regulatory protein
MRGKEMDQKVLHIGIISREDYKKRTLAIARGEYRPQPDEPKIWFESLQSM
AQVLSNENLLLLRTILERKPESLKELEAATGRSSSNLSRTLRTMARYGIV
KMERVRRKIRPVVEATDFTVQFSMYADAHREDGRDAARI
>SYN_01122 transcriptional regulator, sigma-54-dependent
MKGVAKCRKHGNRKEGKVDRALASPVSHKKSGMKKWADNVVPIRDSRPFS
AGYHDLVDNARIGLFRTNLKGDILYVNKCGLAMLGLENLDEAKPGDALAW
YRNPEDRKTFLERLGKTGRIDQFEAECVTAKRESIVLLVNAVLEGDVITG
AMIDISALKHKHEALIRREKRLADAQRIAHLGCWDWDIVTGELFWSDEVY
RIFGLRPQEFGATYEDFLARIHPDDRRTVEERVNLSLADPGIPYSVSHRI
LLPDGAECKVFEKGEVTFDGFGKPVRMIGTVHPLIMRKQTEEELIRAYEE
IQALKEKLEAENTYLREEVGLQHGAGEIIGDSEAIKNTMHRALQVARTSV
TVLLTGETGTGKGIFAHFLHQNSGRADKPFVHVNCAGLPHNLIESELFGR
EKGAFTGSTARQIGRFELAHGGTIFLDEIGELPLELQAKLLRVIEDGKFE
RLGSPHSIKVDARIITSTNRNLEDEISEGRFREDLFFRLSVFPIIIPPLR
ERKADIPLLVEFFTHKCSKVHRKNIRHIPAQTMKSLENYGWPGNVRELMN
VIERAVIVTQGTELQLAGQLSAHSIRSRKERGIEGSEKPAFKGLNGVERR
HILETLQEAGWKIEGPGGAAQRLEMNPSTLRTRMKKLQIKRPETL
>SYN_03226 transcriptional regulator, GntR family
MKKDTEKKIKKQPEVSAQIAYQGIRHMLYTKELVPGQRILYRDLAEKLEL
SPTPVIQALKWLELQGFVQHEPRRGYSMAPFSLKELEELYEIRELIEPSL
VPTAIEKIDKNGLDELKAALEAHLAADRESYLKERLFKNRDFHMTLASLS
GKTTQVRILENVFDMLFLKYGGNYFPISSLSATDQAHQEIYDAVAMRSLE
RAQSVLKNHLTNVKIQVMTSIKKILAEQERKDF
>SYN_00639 RNA polymerase sigma-B factor
MKLPAIAGTLEVYIAEINRFPILTAEEEFRYAIEWKKNQNMEAAEKLVVS
NLRFVVKIAHEYRNYGVKLADLIQEGNIGLMHAVKKFDPYKGYRLISYAV
WWIRAYIQNYIIKTWSLVKIGTTQAQRKLFFKLNKTKKDIQALSLKNPEF
SEIAESLGVREGEVEEMDVRMSNRDLSLDMAIGDDGGSSHMDFLTYAGED
QETALIRKEEAELVRKNITGALAVLNEKEMYIIRNRVMADDPKTLQEIGD
IYNITRERARQIEKQALKKLRLALPYLGEEQKLLEAGSN
>SYN_02956 transcriptional regulator containing sigma 54 interaction domain
MPNFRHGSLYPRAAMLCRERPQSAEPGGRVRTLTDTGERLNSEIARRKRA
ERTLRDRLLFEEMLSVISAGFINLSFERIDEEIHHAMKKVLNFFKVDRFA
LLETLPDRKSWMITHCVSGTDVPSVPVGENLPVSLHPWAYEKLIQKREVL
SFSKIDDLPAEADVDKENWIVWGIRSNLNIPIRIGKPVDHIVAINSVKYE
RVWPDELIPRLRLLGEIFVNALERSRAWKALQESEERLNLATVAAGAGLW
ILDTNTGQFWVTQMLRKLFNFLPGEELSFERYEKTIHPDDRKGVRELVQR
SLKTQNDLTIEYRILKPDGNVCWIMTRGRPYGGATGIPLRLMGICMDITE
RKEMENELRKQLAEINKLKLQLEKENIYLRNEIKTERGFGGIIGHSDTLR
YVLFRVQQVAPTDATVLILGETGVGKGMVAHAIHEMSARKDKTMVTVNCA
ALPSNLIESELFGREKGAFTGAYARQAGRFEVADGGTIFLDEIGELPLEL
QTKLLRVLQDGEFERLGSPRTVKVDVRVIASTSRDLKVEMHNGRFREDLY
YRLNTFPVTLPPLRMRVEDIPELARHFIDKYSRKLNKQFESLSKDTMQML
QAYAWPGNVRELEHVIERGVITSPEPVFQLVEQLEQGPGMEADKPIKGFE
TMAREHILQVLHKTGWKIEGKGGAAAILGLNPSTLRFRLKKLGIKRP
>SYN_01834 alpA-like transcriptional regulator
MRRTILRMPAVKSESGLSRSTLYLRISQGLWTRPVSLGSRAVGWPSDEVE
ALNAARIAGRTDEEVRSLVQELEAARKSAR
>SYN_00064 DNA-directed RNA polymerase beta chain
MGEFRKNFGRIEEILEVPNLIDIQTRSYETFLQEDVAPENRKNFGLQGAF
KSVFPISDFSGKCSLEFVSYKIGAVRYDVNECIQKGMTYAAPLKIVVRLV
VFDTDRLSDQKNIRDIKEQEIYFGEIPLMTEKGTFIVNGTERVIVSQLHR
SPGIFFDHDKGKTLTSGKLIYSARIIPIRGSWLDLEFDSKDLLYVRIDRR
RKMPVTILLKAMGYSTEDLLNYFYDVEHIFCEGENFYAAVDESLVGHKLY
DDIRDINTGEILFKKGRRINKVILKRIREQRVERIKMDVEELPGRILATD
ILDPETGEVLFHCNEALSAAGIDVVREKGIRELSVINLGEDLSNVSIRDT
LLIDRMETPGDAIIEIYRRLRPSNPPTPDTAQKFFNSLFFENESYDLSTV
GRAKMNYKLRLDVSTDVTVLRKEDIMAAVKYLIDLKNGVPECSVDDIDHL
GNRRVRSVGELIENQYRIGLVRMERAIKEKMSLQDIETMMPHDLVNVKPV
SAVVSEFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVR
DVHPTHYGRICPVETPEGPNIGLIVSLSTYARVNEFGFIETPYRIVKEGR
VLPEVKFLTAIEEENQVIAPADQPVNHDGSFKGDLISARKGGDFVNVVPS
EVNMVDVSPNQLVSVAATLIPFLEHDDANRALMGSNMQRQAVPLMRPEIP
LVGTGMERIVARDSGAVVVAKRSGIVESVDASRIVIKCESAEKTDRDTGV
DIYTLIKYQRSNQDTCFNQKAIVNKGQRVRKGDIIADGPATDNGELALGH
NVMVAFMSWGGYNYEDSILVSERIVKEDIYTSIHIEEFETMARDTKLGKE
DITRDIPNVGEEALRNLDDSGIVRMGVSVKSGDILVGKITPKGETQLSSE
EKLLRAIFGEKASDVRDTSLRVPPGVEGTVIDAKVFTRKGAEKDHRSQYI
EDEAIAMLQKDREDEIRIITEAVKKEVGTLLQGKQSGAKIVDPKRKKIYL
KKGDIITPEILSEIPLHLWKEITVADDEETERAVGQMMANLYDKIEVVEA
YFNEKTEKLKASDELPPGVIKMVKVYIAIKRKLQAGDKMAGRHGNKGVLS
RILPEEDMPYFKDGRPVDIVLNPLGVPSRMNVGQILETHLGWAAKGLGEK
LNDMLDSYQKGNQLRDELKGIYQSREFEKFVDGATEEETYQFVRKLRRGI
AVSSPVFDGATESDIRNMLKLANLPSTGQAILYDGRTGEPFDQEITVGMI
YMLKLHHLVDNKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEA
YGAAYSLQEFLTVKSDDVAGRTRIYEAIVKGENTSEPGLPESFNVLVKEL
QSLCLDVELIEEE
>SYN_00945 RNA polymerase sigma-54 factor
MAFELKQNLKLSQQLIMTPQLQQAIKLLQLSRMEMIDVINQEMEENPLLE
DAPADEYDETERNHGSEEGKTPEREELRGIERTEEITGEGDGKEEFDWNS
YLEDYGTFGTTYDRSDGEAPNWDNVLTEKSTLTDHLMWQLKLSRLTEQEM
RVGEQIIGNLDANGYLAASIEEIAGLENVSEKDVETVLKKIQEFDPPGIA
ARNLQECLLIQVKMLGIQNQLVEAIIQDHMKDLEIKNYNHISRKNKVPVD
DVFQAVMIISNMDPRPGSVYNEEKIQAIIPDVYVFKSGDDYKIVLNDDGL
PRLRISNFYKEIMGNVKGDSNSESGRKYIRERVQSATWLIKSIQQRQRTI
YKVAESIVRHQREFFDRGINYLKPLVLRDIAYDVEMHESTISRVVTNKYM
YTPRGIFELKYFFSSSIQRKSGEAIASKSVKEEIRRVIGAEDPLHPYSDQ
EIVSILESKGIKIARRTVAKYREMMNILPSSRRRRYF
>SYN_01297 cold shock protein
MRAHVCAVPVCDIKIQNREPHNPHKEGVRFFCSEKDGLPVRLIRGSSGPI
KEMGFQKGNLQKESYKMSEGTVKWFNASKGFGFIAQDNGNDVFVHFSAIK
MEGYKALEEGARVRFDVVKGNKGPAADNVELL
>SYN_01855 predicted transcriptional regulator, DeoR family
MLIFQCHGDRCLSSNLQEHFTDLKKLVNGKSLLMGEKNVQKRLIRLGQIL
RVFLDKDRVSSIWLSRNFQITPRTIQRDLAALKESGFPIHEIQKGVYRLG
KDLIKNLEVFDETELALVITLRNVVGQLGRPFQKAADGLFNSLYDAASSM
PVYVRMDESIPLDSSLLNRIVKSIRLKKIAGFYYKSGKPHQVNMEPYRVV
HFGGFWYLVGKDTGDSVIKRYALDRISDFKMARTPFRKIPENLDSAIQGS
ANIWFSTDQNLVVKISVDASSSGYFKRRKVFPTQEITEEREDGSLIVTFR
VGRYEAIQDILKSWLPHITILEPAEFRDAFLADMKKWVQRQEQVGS
>SYN_00582 asnC family transcription regulatory protein
MEQRMRDRHGEQNLPTENQKERGERIVLTRDEQQILQALQGDIPLHSRPF
AALGKRLNLSEDTVIRIIQELADRGIIRKIGAILRHRQAGFKQNAMVVWS
VPESRMEITGKILASFPEVSHCYERTPSFEGKYNLFTMVHLKYPDIANQV
REMAQAADLDDYQILVSETEYKKSSMVYFT
>SYN_00775 two-component response regulator
MAITVILADDHKIIRDGLRTLIESQQGMQVIAEAENGRETIKLAKELQPN
VVIMDISMPDLNGIDATREIVNSIPGVKVIALSMHSDRRFVSGMLSAGAS
GYLLKDCAFEELAKAIRTVVTNHTYLSPMISDIVVKSYINKSPETTTENA
PSLTAREREMLQLMAEGMTAKEIAAHLFVSVKTVETHRRNIAQKLNINRA
AELIKYAIREGLVTL
>SYN_02588 response regulator with a HTH DNA-binding domain
MTKKRVMIVDDHPILRKGLSMLINQEPDLTVVAEADTAQRALEMIDSHKP
DMLIVDISLPGIDGIELIKMVKLNNRDLPSLVVSMHDESLFAERALRAGA
RGYIMKQEALDKILVAIRRVLAREIFVSDKIATCMLEKLVSSDDKAVSSP
IGLLSNRELTVFRMIGQGYKTSQIAEKLHLSIKTIESYRAHIKEKLKLSD
GTELLKYAIQWVQNTP
>SYN_02175 cold shock protein
MAQGRVKWFNDKKGFGFIENDEGGDVFVHFSSIQGAGWKTLNESQRVRFE
IQQGQKGPSAVNVELI
>SYN_01601 DNA-directed RNA polymerase alpha chain
MVRNWCSLIRPRRIEIDESTHTRFYGEFVCQPLERGFGITLGNALRRVLL
SSIQGAAIVSVKIDNVLHEFSTVPGVKEDITDIILNLKGVRLKLLSDGPR
VIRIDTKKEGVITAADIITDGTVEVLNEDHYIASLSGDMPFRMEMVVNSG
RGYVQAKKEKDVDQPEGTINIDALYSPIKKVNYTVTHARVGQIADYDKLS
LEVWTDGNVLPEDAVAFAAKILKKQLQVFVGLHTVIGTEEVEEEEEGEAV
SEKENLNDILLRHVEDLELSVRSANCLKNAGINLIGELVQKSEAEMLKTK
NFGRKSLSEIKEILAEYGLTFGMKLEFTPWNKDVREEMGEIQEEG
>SYN_00580 transcription antitermination protein
MSWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLF
PGYLFVDMPCLDNQAKLDVLKTFGVVRILGKPTGSAPIPVPDDKIDAIRR
IVDSRVEVQNLQYPHVGEAARIVDGPFKGIEGTVIKTDYDKDLFVVTIEL
LQRSVAIKLDSSQIEKI
>SYN_01901 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
MGRDTQVLACGSLFIEKIENTYTAKDANLLKKAYAFSRQRESDCDSSSFK
AAELLIEQGADGETVACALVAPHFWQGRVKPEEIREHVSQDVADTLAYLK
QPFSLRIDTEIHRRKDINALLVSMSETPRAAILLIVFRLIELETTLESQG
KNPCHMAQETLHFYVPIADRLSLGEMRRRLEDVCFRILHPFQYEKLKQDV
TPIQSEDEKCLEILIEGVKRLLDKNRIHAEVHGRAKSLYSIHLKMTLKGT
ALEDIMDRIGLRIIVSSVPECYAVLGLLHTHFKPIPGTFDDYIGLPKDNG
YQSLHTCVYPMREVTHKPIEFQVRTELMHMEAEHGSAAHWLYKSAVAMGK
DSLKNQWLKGLVRRHDQAKSTDAFIELLRRQVCEDHMVVFGKGGRITRLP
DKATVLEYLDAANFFASRSSVVKVNGKLASLDQTLRDGDSIEIVDCEDSA
SPGTVVDDMGDIIGQHKASPMNTEGCKVWATAQGSILRHKEENSHASTEG
P
>SYN_02373 transcription termination factor NusB
MSRVCHKLEDFMRQRRIAREIALQVLYSLEVVEMEAGEAIELYWAHYEAP
MDARPFSSLLIEGAWKHRDQIDSLIGGCSANWSIARMSKVDKSILRMAVF
ELCFCEDIPPKVTMNEAIDLGKVYGSENSGSFINGILDALYAKIHKKNDE
QEIAPPPERSE
>SYN_02108 transcriptional regulator TetR family
MQATMTDKNTRELLLDAATTLFAEQGIAATTMAEIAASVGVNPAMIHYYF
KTRDSLLDTIIEERIGRIIDMIWEPVTGEEDDPLIMVRDLVNRIVNTCET
MLWLPSLWIREIVNEGGALREKMLNNIPIDKMNKFSAKIAEGQKQGVINS
GIDSRLLIGSIIGLTMLPLATAKLRDQIPTMKGLSSEDIVCHVTALLFTG
LTNPSNSDDIKKQRT
>SYN_03199 hypothetical cytosolic protein
MINKYRCKKKGGIIQAICEDTTCEWYLKNESFLNCTWVACNYGPFTLEEV
GDMMGVTRERIRQIEAKALKKLQHKKRRDQLKDFALPSNEWDAV
>SYN_01827 SNF2-related:Helicase, C-terminal:type III restriction enzyme
MKIIDNINSLLGDDLKASIQTKAKMKIAASCFSIYAYEALKSELAKIESL
EFIFTAPTFVPNEVTDKLRKERREFFIPKANRERSLYGSEFEIQLRNKLT
QRAIARECAEWMCRKARFRSNKTRSPMQQFACIQGPSLEAAYMPLHGFTA
VDLGYQQGDAVSNIVNRVDETAFTSTYLQLFDQIWNDPTKLEDVTTAICD
HISSVYQENSPERIYFLMLYNIFSDFLDDIDEDVLPNDRTGYLDTLVWNK
LFNFQRDAAIGIINKLETYNGCILADSVGLGKTFTALAVVKYYELRNRSV
LVLCPKKLADNWLNYNSNLTTNIFSRDRFNYDVLCHTDLSRTSGESFGIP
LNRVNWGNYDLVVIDESHNFRNNDAVKDRETRYQKLMNQVVRQGVKTKVL
MLSATPVNNRFNDLRNQLALAYEGDSENLSKKLRTGRSVEEIFRNAQTVF
NQWSKLAPEDRTARAILDSLDFDFFELLDSVTIARSRKHIQTFYDTSDIG
QFPERRKPLSFHSPLTGRTDVMSFNEIFEQLSLLKLAVYAPISYILPSRL
KKYEDLYDTQVEGGKGKLRQADRERSLQALMTTNLLKRLESSVEAFRLTL
KSLHDNHTRTLSKIDSFRVAGDAGSVSDWTDSLANLEAEEDDIPVLDNAE
IGGKVKINLADMDLPSWEHDLKVDLEVINALLESMAKVTPEEDAKLQHLK
ALIFSKIENPINDGNRKVLVFTAFADTANYLYNNLADTLLATQRLHTGKV
TGKDTPKSTLRKNYDFQSLLTLFSPRAKEKAQVLPNEPAELDLLIGTDCI
SEGQNLQDCDYLVNYDIHWNPVRIIQRFGRIDRIGSINKTIQLVNYWPDI
SLDEYINLKERVENRMVIADVTATGDDNVLTAKSSEISYRKEQLRRLQEE
VIELEDLKTGVSITDLGLNDFRMDLLNYVKTNGDLANVPNGMHAVVPARP
AMGLHPGVIFALRNRNHAVNINQQNRLHPYYLIYISGDGQVIANHTEVKT
LLDLVRSSCKGQPEPIQAVCRLFNQLTDEGRNMKACSDLLRTAIRSMIDV
KEEKDLDSLFSGGRTTALVNTIAGLDDFELVAFLVVQEEG
>SYN_00070 transcription antitermination protein
MAFKWYVVHTYSGFESKVKQSLQERIEAAGMQARFSDILIPEEDVVELVS
GEKKTSKRKFFPGYILVKMELDDDTWHLVKDTPKVTGFIGSREKPSPIPD
KDVELLKTRIDEGTLKPKPKFKFEVGDHVTIIDGPFTNFDGVIDEVKAEK
GKLRVIVSIFGRPTPVELDFIQVVQS
>SYN_02488 cold shock protein
MMPEGTVKWFNDSKGFGFIAQDSGNDVFVHYSAIQGTGFKTLAESERVSF
DVVQGAKGPSAENVRKL
>SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MSIYKGSASTLLHSTGASNSMILKAIEFAVQAHAGQYRKITRIPYIFHPL
QVADILTECRCNEEVITAGILHDTVEDAPVSLEEIRENFGNDVAALVEAA
SEPDKAVSWEERKHHTLSALKTAPMDVLLLSCADKLDNIRSIQKDSARLG
ELIWSQFNRGKEKQAWYYHNLASIFREKADGEPGNSLFESFSGDVHLVFP
AREYAARQFV
>SYN_02037 sigma factor
MWMERSGLAENKIATVEDNDLKWVLLCQKGDVEAFGILVERYQKKMLNVA
YRMTGDYEESCEVVQDAFLAAFRTIKKFRGEARFSTWLYGIVINSTKNRL
KQLKRDKSRFWHAGDNPGDPGDGAIDGFDCLAASGSGQQESLLEHLEKKE
LEAGVQKCIGLLESDHREILILRDIQGLSYDEIVTILKIPPGTVRSRLFR
ARIALKDLLLARIGEFS
>SYN_01881 transcriptional regulator, Cro/CI family
MQAVVKTRHIDIKIRGKNIPTKLIYALKDEYGDKVKITDDDDVLVNILET
PWYKDLKEKTTPGDTTRIYREAKGWTQEKLGELLGDIPRQHISNMEHGKR
PISSNTARKLAKLFNVPMDRFISDRSLN
>SYN_01298 superfamily II DNA and RNA helicases
MKTFAEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVLNRQTDLVGLAQTG
TGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQK
LKIVPVYGGASIVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWV
VLDEADEMLQMGFQDELNAILAVTPDSKNTLLFSATMPREVAAIAANYMK
DPLEIIVGRRNAGAENVDHIYYVVSARHRYQALRRIADMNPELYAIIFCR
TRLETREIVDKLIEDGYSADALHGDLSQSQRDHVMHKFRSRNIRMLVATD
VAARGLDVNDLTHVINYSLPEESSGYTHRSGRTGRAGKKGISIALIETRE
KHKIRAIERCLKKNFEEGRIPSGHEICKRRLLSHMEAVKKTEIDAEHIDP
FLPAISKTLESLDREELIKRFVSMEFNRFLASYRNAPDLNTFEKTPPKKK
TREAAAGKPYRLASRKKFTPLFINAGKKDGISPKRLMRDLSDAAGMPDVR
IGRIEVNNTTSLLEADSRFAPKILQALKSLTINGRYVAVEIDRKTAIRNR
PENRRYDSSTAKDRRKGQSRPA
>SYN_00017 superfamily II DNA/RNA helicase, SNF2 family
MIRLEDLQPHAAIRGLLPDCLVTVISVQWFGSEALELTYKTPTGRLANEL
LYRHDEPRLDLVEHGRPWSFDGDGTMFRLVSEAHRIRLAHLFDPVLAVHT
SIVDPLPHQITAVYEAMLPRQPLRFLLADDPGAGKTIMAGLFIKELIARG
DLQRCLIVCPGNLAEQWQDELYRRFHLPFEILTNDKLESAHTGNWFLETN
LVIARLDKLSRNEDVQRKLQTPDCRWDLVVCDEAHKMSATVFGGETKYTK
RYRLGQLLSTLARHFLLMTATPHNGKETDFQLFMALLDGDRFEGRFRDGV
HVTDISDLMRRMVKESLLKFDGTPLFPERIAYTIPYKLSDLEAQLYKAVT
DYVREEFNRAEALANDKRAGTVGFALTILQRRLASSPEAIYQSLRRRRER
LESKLREMELLQRGGQTVSILTNSIPILDTEDVEDLDEAPDNEVQVAEEE
ILDQATAARSIAELKAEIETLKDLEALALRVRHNGLDTKWRELSSLLGEI
FTAAAITGNVADPTLPYGAGAIPKPTPSPHQKLVIFTEHRDTLNYLATRI
TTLLGRKEAVMTIHGGMGREDRMKAQEAFKHDPEVQVLLATDAAGEGINL
QRAHLMVNYDLPWNPNRIEQRFGRIHRIGQTEVCHLWNLVADETREGDVY
RKLLDKLEQARQALGGQVFDVLGKLQFEGKLLRDLLIEAIRYGDQPEVRA
RLTTVVEQALDRNHFQDLLEDHALARDAMDARRVQRIREDMERAEARRLQ
PHYIESFFLESFRNLGGSVRQREPRRYEVTHVPAPVRNRDRLIGIGEPVL
PRYERISFEKALVNSPGQPLAAFVCPGHPLLDAVIDLTLERHRDLLKRGA
VLVDDRDMGIQPRVVFYLEHAIQDASLTRSVERRIISKRMIYVELDANGK
AHHVHYAPYLDYRPLIKDEPGVGTILDRPECVWITRELENRAQAHAVAHV
VPEHLAEVRDHRLKLIAKTEAAVKERLTKEITYWDHRAEQLKLQEQAGKI
GARLNSGEARKRADLLQGRLQKRLEDLKLEAQIPPLPPVVLGGMLVVPQG
LLMAMKGQTMVSLTASADTQASAARARAIVMEIERSLGFEPTDREVEKLG
YDVESRIPGTGKLRFIEVKGRISGSPTITVTRNEILYSLNKPEDFILAIV
EFLDSDSHRVHYLRQPFQREPDFGVTSVNYDFQELLDRAVAPS
>SYN_01019 two-component response regulator
MCVNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPE
IIIMDISMPDMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGAS
GYLLKDCAFEELVNAIQTVLSNHTYLSPTIADIVVKNYVHKAAGTSVVVS
SELTPRERELLQLLAEGLSAKQIAANLHVSVKTVETHRRNITQKLGVGSV
AELIKYAIREGLTTVGT
>SYN_02510 serine phosphatase regulator of sigma subunit
MTGRTFSMTANLTEVLHKYSKEVARQWAECLHQEVSELYARRPLEELIAT
TSQAGEAYLAAIVHHDCSQIDAFIARISKLRLEGGFSLSEVQKAFEIYRT
LLIPILVKELRGDALLSALQSLNNCMSHTIFSFSDYFHNMANARLMEKQK
KLDEDLKAAAGIQQCLLPRKLEKRPKFENVDIDWKFMPCETIGGDIFNII
HLDEDHLGFYMIDVSGHGVPSALVTFSISQALQPQMGYTIRKRPGLSPDY
EIVPPGEVLKALDSEYPWERFEKFLTIIYVIVDIRSGRLIYSNAAHPPPI
LLHADGTFELLEKGGTIIGMDGILPFEEEEKAFSPGDKILLYTDGVFEFT
NDEGELYGEKRFYPLVKSLSGLAVGKVLDEIILTIERFARGEKFPDDVSL
MGIEFKEESKTT
>SYN_00007 transcriptional regulator with a HTH domain
MEEAFHGRRFTPMTTKLNVFISSVRKELEDERLVVQNLLNTDAFLSANCT
PVLSETEPASPQESLEGCLQALDECQVYLLIVGTEYGMPVDGLSLPHTEY
RRAKERDIPVLAFIRGDRSVKREEETVRLLDELNVDGPTYQRFGNVIELQ
KEVREALVALLEERFEISPTNDENSIAESTIEATSAFESRPLDRIRWRDL
DLDVARTLIASAERCNPDELSNDDLLAGAVLRGLVWYDPALREHYATAAG
IVLLAKDPSAVFPQCRILADSYRSTLPDGDPRDHEDIRGPMPLAIERAID
FIDRNTRHPMRIVGLNRVRLDEYPVDGLREALVNAVAHRQYEDAGRKIIL
EVFADRIVISSPGLPPRPITLAGLRRGNYRPCSRNPVLAQCLSYFHRIEE
RGSGFRRMRDHMLNHGLDLPILNTEMGYFQVTFPGPGENIDLLRTPEKRL
SVTPAVEARLNERQRTMLQWLAEGQELTSRQCEAEFGVSRPITAGDFGLL
VDLGLAEKLGAGRSTRYRLKARENR
>SYN_02539 acetyltransferase (GNAT) family
MRRQKLIDAGRMQATRTSDCIRRNDMTIYRFLEDAQPELLDQIITLYRRA
GWWPEEDADPLLVAQIIKGSHCFLAALDGQRLAGMGRVISDRASDAYIQD
LTVHPDYRRRGIGTCLVNTLLKRLQTDGIPWIGLIAERNSFPFYIPFGFE
KMPDSTPMLLRKS
>SYN_00015 transcriptional regulator with HTH domain
MKGAMNKMKAQKCSICGAESLTRKVGTESFEYKGKKKEIPNYVTYECSEC
GEAIVDSATLKESGKILKDFQREVDGLLTGPQIKAIRIKLGLTQEQLANI
IGGGLKSVARYESGQVCQSKGMDNLLRILDAYPQTLKIIQRREQTVKLSA
KVTYIEDARARKGYRFKDTIYSPDTKEATYGS
>SYN_02359 serine phosphatase RsbU, regulator of sigma subunit
MKSGHFPISKHSRGSPMLSNKSIAFKLTLVITLCSTCIFASLLGYNYYRS
RLVLRKELVRNARNLTMASVNRIETVLTAVTKVAEGVARSLENTRPTREE
LSSLLRSTLAENPEIYGCGAAFDPHATGPDSHPYITYFQRDHGRIVYAPD
DTLNYLQKDWYQISRETGKKEWTEPYYEGNVLMATCSVPFYETTDGARRL
KGVAFSNVSLDWLTELVASIKVLKNGYAFLISRYGTIVTHPDRAMIMNVT
IFGFAEAAKDPTLRELGRKMIKGGSDFIPFTNLKGVKCWVYYAPIPSTGW
SLAVVFPETELLDQVKTLSLTGALIGLGGIMLLTMAVVLIARSITFPLKT
LAGATTAIARGDFDVELPPVSTQDEVGKLADAFAAMKSSLKEYIKRLTET
TAAKERIESELRIARDIQRDFLPRTFPPFPDRQEFELYAVMEPAKEVAGD
FYDFFFVDDTHLCFVIADVSGKGVPAALFMAMSLTLIKATARYGLPPEEI
LCRVNNVLARENDSCMFVTAFLGILDTESGEVIYANGGHNPPLHLKHGGG
VAWLARSGSLMVGVMEDAPYRCERILLEPGDCLFLYTDGVNEAINAREEA
FSNDRLERRLRALQGYEIKDVVFGIMADVRAFTGEAPQFDDITMMVIQYR
GE
>SYN_00757 RNA polymerase sigma factor
MGKNIQSEEFKKLISLGEEKGFLTYDDVNDFLPSDITSSDQIDDIIMLFG
EKNIDIIDTEKGEKLLVKSPVEERETAKEGELIDMMSVAGKTGDPVKMYL
REMGYVSLLSRDGEVEIAKIIEEGAQEAMGAVFGVTASVKEVVDIGNKLK
SDEIRIKNVIDNLEDEDGYVEEDSQRERVIKLLDKVAMLDGKNDQILQKL
RAKDLSEDGRKALKIQMEKNKKAIIKLCRKVRFGKKQIDKLVANIKRYLA
ELEKAEDEIQKCKEETGLSLTQIEKACSRLKKYPQDEAAILAEYGITMEK
LKSVEAMIREANRKLKNITKETGYSVTAFKKILFNIEHGEKKAEEAKRKL
VEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFST
YATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGREPS
PDEIANKMEYPLEKVRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKKIM
SPSEATISMDLAEQTRKILSTLTPREEKVLRMRFGISERIEYGEEELEQG
EEEGEFPGPIETGAYRKLRNPSRRRTVKQV
>SYN_02924 bacterial regulatory protein, Fis family
MTRLLLIPIPGWVRSSGRKPQAAQAHKSTIEKPITKPAERALIWNRDYRS
RKETNLFMNYIVDRRNIVAERNIDVEGDKDVPSSPAFVLERILQKQLEDI
ATVLHSTDSDRSTLYDDIMTMVDRGLYRIALQRNNNVKSAAAAYLGINRN
TFQKKMAKLGLDSPKP
>SYN_02416 transcriptional regulator TetR family
MAANSDKINNLKTSKANHIKEKKRLLSKKAENTRDRIVESAKILFAENGF
LKTTVVDICRNVGLSEAALYEHFKGKEDLLLAIPDLWVSELLKDLDDQMF
GVKGAFNKLRKYIWWTYRRTEEAPVDAKIVYLFLKTSSSFMETSVYQNVR
LLYHYLIDIFEEGKKSGEMRQDIDSSVAQSIVIGTMDHMITLWLLKNMSY
SLFEKAEETFDLLESAFSSKERS
>SYN_02733 helix-turn-helix DNA binding protein
MTEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLE
NGKATAQVGKVLQVLTALGLDVYIESRSWPNE
>SYN_01476 bacterial regulatory protein, LuxR family
MVIMTGKKEDIEIALQERIKELNCLYGMARLAERHHDSMEDFLMHLVDFL
PLSWKYTEFACAQIIFKGEIFDSRKFGWTEWRQSARIRINGEAVGEVTII
YMEDPPKTDEGPFLKEESALLEGIAQRIGEIALRIMAEKELQENNRQLLL
ERKALEEANAALRAVLSNIESEKKRIYENFHLNIEKVVMPVIHALTPGIE
KSKQKYLDMLMTNLEEITSPFTSRIFNHYRALTPTEVDICNMIRNGLRTK
EIARLRGVSAATISRHREHIRRKLKIANQQINLTTYLQSLPAQDTSSPPP
CV
>SYN_00981 response regulator with a winged-helix DNA-binding domain
MEGGTKEDFMPTGQKRILVVDDEKDIVELLTFNLEKEGFAVTQAFDGEEA
LKTIRTNKPDLVILDLMLPGVSGLDICRQVRRNEETETLPVIMLTAKGEP
LDKVVGLEIGADDYITKPFNVRELVARVRAVLRRSSQRPKEASEGTFTFQ
GLHVDYRTYQVSVDGKKIELGPTEIKLLRCLTRQPGRVFSRDQLLDAVWG
EEAFVEPRTVDVHISRLRADIEQDKEKPKYILTVRGIGYKFADGS
>SYN_02883 bvg accessory factor
MLLVIDVGNTNTVLGVFDGEELVHDWRIRTVIENTVDEYGMLMYNLYKTS
KISSKAIQHIIISCVVPPMLNILEPVCEKYFQVKPLIVGPGIKTGMPIFY
DNPKEVGADRIVNAVAVFEKYKREAIVVDFGTATTFDYVSPRGEYMGGCI
APGIVISSEALFTRASKLPRVEFSTPKLIIAKDTVSSMQAGIIYGYAGLV
DGIVARMKEEIGSNPLVIATGGLAKVVKPETRSIEMIDDMLTLEGLRLIY
KRNS
>SYN_01280 RNA polymerase subunit
MARITVEDALKVAGNRFALVLLAVQRSKQLLRGARPLTNVRNNREIVAAL
REIADNKVYFSHPEYLMGAKEDFKLIADDTTEFIGDEDYVE
>SYN_02736 helix-turn-helix DNA binding protein
MSEPYSTLREKMKPEARKKAAGKTKALLAAMPLQELRRARNLSQEQLAKM
LSVKQAAVSKMEQRTDMYISTLRNFIHAMGGDLEIIAKFPDGSVQINQFK
DIVAKEGNNSPSER
>SYN_02624 transcriptional regulator, MarR family
MIVTTESENIYEYRIMRALRRVIRAVHIHSKKLNSEYGLTTPQLLCLHTL
AESNRMTLTDLARTANLGISTANGIIDRLETKKYLTRTRCAEDHRKVYLE
ITPAGREIVSKAPSLLQYKLSASLAQLPEAEQTTIAESLERVVKLMEAEK
LDVSANLFTGEHSYSR
>SYN_01929 ATP-dependent RNA helicase
MKFENYTISEAIKQNLAQLGFRRPTDIQFKSIPSIMKGEDVLAIAQTGTG
KTAAFAIPLIDRIHREKSSKRVFGIKCIVLVPTRELAMQIGEVFAGLAKH
TRVKTFPLIGGVEQDEQIRKLQDGIDILIATPGRMFDLIHQGHIRLDRIE
TLVLDEADHMLDLGFIEDIKFVKRMLHKKHQTLFFSATINPEIKKLAFSQ
VKGTAIRIQISPEDPVSANVTHAVMFVEMDDKRFFLERFLKENQESKVIV
FVRTRIRAERVARAMERVGLHSLTIHGEKDQAERTSVMRKFKEGECNLLI
ATDVSARGIDIPDVNYVINYDLPEKAENYVHRVGRTGRGDNKGIALSFCS
SDEKMRLQEIQQFLNKEIEVVKVGKKDYGLTLGASSAKTGVEALIEEHEA
WLKTKRKTKKSRK
>SYN_00100 acetyltransferase, GNAT family
MEGSAVSLDPEYARNYQKDIHLKSGILLRIRSIRPDDKDAIADLFSHLSR
ESIYLRFLLKKKELSNAELSYLTEVDFINHVALVAILPEIDEKEIVGVVR
YIKIKEVAGKTIAEIGLLVIDEYQGKGIGMALLEHLAGLARDFGINELEA
CVLKENKRIRYLFNRCGYKVTSEIDGKMLNLTVHLDSLKERSSKEK
>SYN_00652 transcriptional regulator, MarR family
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMD
EEGLLPSELADKTAQDRATTTGLLDRLEKDGWIERKPDSKDRRSLRVYLT
SYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT
>SYN_00477 nickel-responsive regulator
MSDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTE
DQEVAGAITYIYDHHQRDLLNKIIDIQHDFHDVIKSTQHIHLDHDNCLEI
VAVKGNPTTISKLSNALKAIKGVRHGSLSISGVGQIA
>SYN_03689 gcn5-related N-acetyltransferase
MVLYPKEYEILWTDRLGTEIFFRPVKAADERSIQELVYDLPEQDIFIRFF
HSLKTFPHKVAMPFAAIDYKDKIAVAAVIGKEEPEGRERIVAIGPYINNP
DTGFAEAAFTTHHDRL
>SYN_00342 transcriptional regulator, marR family
MSPMDAHAGQLIGLIEKITYTFGMQSMEEQCCSENISHAEYRALQAALDC
DICSMQDIAKSAGVTKSGATRIAKRLEGKGLAKRQQDRKDGRICCVTLTE
EGRTLLKRIEDRLLNKMRKILVNMDTTVREILILSLSSFVQSAERQGVDE
GQKGEVRCCLMEKKNLPGNG
>SYN_01033 transcription elongation factor
MNKRRIYVTEQDMERLEDLLETSKKSEYARSLEAELVNAVVVPSEEMPPD
VVTMNSCVCFEDLTTGNRETITLVYPGQANMASGRVSVLAPVGSALIGLS
VGQTIEWPMPNGRKRRLRIVEVLYQPEAAGDFHL
>SYN_01953 response regulator with a HTH DNA-binding domain
MIKILIADDHTIVREGLKQIVGDVGDMMVADEAGNGQEALQKIREKDYDV
VLLDISMPGRSGLEVLKDIRAERPKLPVLILSMHSEEQYAVRALRAGASG
YLTKASAPDELIGAIRKVSRGRKYVTASLAEKLALELDADIRKPPHEILS
DREYQVMLMLASGKTVTEIAEELCLSVKTISTYRSRILEKMNMKKNAELT
LYAVQNHLVD
>SYN_02988 transcriptional regulator
MKSRLKKSHRLIRLISNIKSEPYLTVEQLVKIHRISRAQFYKDKAALAEL
GFEFSWDRRRRRFVISRVAYCPVENLTLSERWALLMAARQLSASGDYSLS
FEVLNAARKLAAGLSDPIRETAVSLFNDLVLREGYGCRKEVMNKISMAIF
EKRRIILTYKKPLDSQPEREELDPYHLFFQDRSLYVEGYACLRRDVRMFR
LNRIRDIAFTPIRFSIPDDYDFGKRYRNAFSVFGGTTTQRVVVRFTAHIR
PYIEETLWHHSQVVTIENGGFIRFEVQVAEPREVLWWAFRWGAGAEILEP
AWLREKAKCEVEKMAGMYGRGSGSG
>SYN_02517 hypothetical cytosolic protein
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKD
PGITAMVDTIKRKELAYLYFLGAKPRKQPRERLDKRYIANGNAPRSTFRS
>SYN_02121 transcriptional regulator, LysR family
MIAVAVMAYDGFRNITIQQLETLVALVEERSFSRASRRVCLTQPSLTKHV
KNMEEVLNVRLVNRERMGISLTPEGKVLYDYARKLLHLREEAGERLVRTQ
DHTGGVIDMHASTIPATYILPYVLSDFRKIHPDIRVNVQMADSEESMDAI
LNQQSEIGIIGKKPLNQKLNVEPLWEDRLILAVPRGHRMAGRGMVTWAEL
AGEPFVVREKGSATREVFERYLRDALNWTLSRLHIAVELGSSEAVKEAVI
AGLGISMISIHAVERELLSGLLYEVPVEDCRIERSFYLIYRRQLALMRHH
QIFLDFVRSHKIHREQLPA
>SYN_00178 superfamily II DNA and RNA helicases
MPMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIR
DAATRAGWTKLMDVQAKAIPYILARRDLMIQSKTGSGKTGAYLLPILGRL
DPRKAACQAMILVPTRELALQVSREALLLSADSGIRTAVAYGGVGYHAQL
EAFREGAQLVIGTPGRILDHLIRSSLSLKALSILVFDEADRMLSMGFYPD
MKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLSLSRDQIHVTE
TEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFG
YDADELSSELSQKAREKVMARIRSGLLRFLVATDVAARGIDIPDLSHVIQ
YEPPEDPEAYIHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQ
ERSLPKDEEVETTVSQRVIALLEAKMRMRDRLQVEHMQRFIPLVKSLLQN
EEEMDLIAMLVDDFYMATLNTPPPQPPEVQKSSVSAGGPEAASGAKKKRR
HRKSSRSMAGSRSDSGESTGETEGD
>SYN_01633 nif-specific regulatory protein with sigma 54 interaction domain
MSKHNYEELAALHAIARTLAQPGELRDQLERVLQEMNQRVGMQRGMISLL
DRESGEVWLDVAHGVDIQGMEVSYQPGEGITGKVAQTGRPMAVANLGQET
HFLDRTGARRFLNRSELAFLCVPIIYDNRVVGVLSADKAARQVEDLDREL
AMLSSISELIAKSVHIRALEEENRRLRHMLGRSTVPDSEIIGHSRVMQEV
FGLIAQVADSNTTVLINGETGTGKELVARAIHDRSSRCKGPLIQVNCAAM
PDTLIESELFGHEKGAFTGALHARRGRFEEAHGGTIFLDEVGELSAAAQA
KLLRVIQEKKFQPLGASRVVSVDVRIIAATNRNLEEDVAVGHFRADLYYR
LNVFPIYLPPLRERGSDIILLADYFVLKYNKIMGKSVKRISNAVLEAFLS
HSWPGNVRELENCIERAVLLATGDSIETLHLPPSLQIRSREGEKKESGKF
NAMIESQERAMIVDALKESHGNQSQAARILGTTKRIIQYKIQKFGIDPRR
FNPKHAGSSTISG
>SYN_00850 transcriptional regulator, TetR family
MKIPREGAAKTRQSLLTTAEEIFAEKGFRNATIAEICERAGTNIAAVNYH
FGSKQALYIEAWRHAFSESIKAHPPSGGVREDAPPEERLRGHITATLCRM
ADENNREFWFMQREMANPTGLLEEVLREEIRPLQMRTAGLVRELLGPLVS
DREAKFCEISIMSQCMNPLVARWGRGKKNAEPDDPPKIDDIYAYADHVVR
FSLAGMRALREAMEEEHMGLKGGKKSATLETGAGNS