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2024-05-05 16:21:54

Gene list

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COG category: Transcription
Organism: Syntrophus aciditrophicus SB

Number of genes found: 96

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Syntrophus aciditrophicus SB
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYN_00717 transcriptional regulatorchromosome CDS2205482 378 - 0.428571
NA SYN_00795 radical SAM superfamily proteinchromosome CDS2348746 1092 + 0.580586
NA SYN_02588 response regulator with a HTH DNA-binding domainchromosome CDS232136 651 - 0.526882
NA SYN_02736 helix-turn-helix DNA binding proteinchromosome CDS958608 345 - 0.484058
NA SYN_01122 transcriptional regulator, sigma-54-dependentchromosome CDS410684 1938 + 0.561404
NA SYN_01953 response regulator with a HTH DNA-binding domainchromosome CDS806039 633 + 0.554502
NA SYN_00997 carD-like transcriptional regulatorchromosome CDS2050386 486 - 0.440329
NA SYN_01901 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolasechromosome CDS1780697 1506 + 0.503984
NA SYN_00178 superfamily II DNA and RNA helicaseschromosome CDS64776 1578 + 0.579214
NA SYN_02430 ATP-dependent RNA helicasechromosome CDS2870357 1272 + 0.527516
NA SYN_03199 hypothetical cytosolic proteinchromosome CDS1273588 285 - 0.442105
NA SYN_02076 transcriptional regulator, tetR familychromosome CDS3147761 576 + 0.512153
NA SYN_02416 transcriptional regulator TetR familychromosome CDS2887131 672 + 0.415179
NA SYN_02488 cold shock proteinchromosome CDS2438394 204 + 0.47549
NA SYN_00100 acetyltransferase, GNAT familychromosome CDS1820840 591 + 0.443316
NA SYN_02432 cold shock proteinchromosome CDS2869699 201 + 0.462687
NA SYN_02801 response regulator with GAF and HD domainschromosome CDS1392497 1485 + 0.405387
NA SYN_01798 transcription termination factor rhochromosome CDS2708199 1248 - 0.539263
NA SYN_03226 transcriptional regulator, GntR familychromosome CDS22064 702 - 0.517094
NA SYN_01297 cold shock proteinchromosome CDS3116024 399 + 0.463659
NA SYN_03689 gcn5-related N-acetyltransferasechromosome CDS2217717 351 + 0.51567
NA SYN_01827 SNF2-related:Helicase, C-terminal:type III restriction enzymechromosome CDS1699796 3273 - 0.525512
NA SYN_02733 helix-turn-helix DNA binding proteinchromosome CDS959759 249 + 0.522088
NA SYN_02755 transcriptional regulator containing an HTH domainchromosome CDS936821 1242 - 0.495169
NA SYN_00639 RNA polymerase sigma-B factorchromosome CDS1953418 870 - 0.510345
NA SYN_00359 DNA polymerase V subunitchromosome CDS2939795 588 - 0.54932
NA SYN_00904 GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolasechromosome CDS1653462 2172 + 0.474678
NA SYN_00796 ribonuclease IIIchromosome CDS2348037 723 + 0.533887
NA SYN_00562 acetyltransferase (GNAT) family proteinchromosome CDS1136995 456 - 0.506579
NA SYN_00063 DNA-directed RNA polymerase beta' chainchromosome CDS306953 4146 + 0.500724
NA SYN_00007 transcriptional regulator with a HTH domainchromosome CDS28880 1578 - 0.604563
NA SYN_00427 ATP-dependent DNA helicasechromosome CDS699671 2103 + 0.521636
NA SYN_01678 acetyltransferase (GNAT) family proteinchromosome CDS3013222 456 + 0.458333
NA SYN_00599 Ni2+ insertion GTPasechromosome CDS2404721 660 + 0.543939
NA SYN_00580 transcription antitermination proteinchromosome CDS2392469 504 + 0.52381
NA SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolasechromosome CDS1872353 633 - 0.488152
NA SYN_00542 transcription elongation factorchromosome CDS635172 486 - 0.415638
NA SYN_02827 RNA polymerase flagellar sigma factorchromosome CDS1364764 786 + 0.442748
NA SYN_02988 transcriptional regulatorchromosome CDS2763041 978 - 0.559305
NA SYN_01834 alpA-like transcriptional regulatorchromosome CDS1710593 243 - 0.547325
NA SYN_01033 transcription elongation factorchromosome CDS1635430 405 + 0.511111
NA SYN_02108 transcriptional regulator TetR familychromosome CDS1077341 648 + 0.432099
NA SYN_02510 serine phosphatase regulator of sigma subunitchromosome CDS2453130 1239 + 0.500404
NA SYN_00652 transcriptional regulator, MarR familychromosome CDS2140888 444 + 0.403153
NA SYN_02369 regulatory proteinchromosome CDS194853 480 - 0.49375
NA SYN_00757 RNA polymerase sigma factorchromosome CDS2240067 1743 - 0.44062
NA SYN_01855 predicted transcriptional regulator, DeoR familychromosome CDS1736672 1041 + 0.541787
NA SYN_01019 two-component response regulatorchromosome CDS1160725 654 - 0.495413
NA SYN_01437 cold shock proteinchromosome CDS256172 273 - 0.443223
NA SYN_02883 bvg accessory factorchromosome CDS2020143 765 - 0.522876
NA SYN_03008 rrf2 family proteinchromosome CDS2516307 555 - 0.472072
NA SYN_00582 asnC family transcription regulatory proteinchromosome CDS2393389 543 + 0.511971
NA SYN_02517 hypothetical cytosolic proteinchromosome CDS2458223 303 + 0.514852
NA SYN_02175 cold shock proteinchromosome CDS1477390 201 + 0.487562
NA SYN_02539 acetyltransferase (GNAT) familychromosome CDS1506211 492 - 0.544715
NA SYN_02071 swf/snf family helicasechromosome CDS3155069 4224 + 0.596354
NA SYN_01789 transcription elongation factorchromosome CDS2700704 1263 - 0.537609
NA SYN_02037 sigma factorchromosome CDS17505 654 - 0.533639
NA SYN_01929 ATP-dependent RNA helicasechromosome CDS1879588 1242 - 0.52818
NA SYN_01725 transcriptional regulator, MerR familychromosome CDS660361 363 + 0.443526
NA SYN_00945 RNA polymerase sigma-54 factorchromosome CDS1230643 1464 + 0.451503
NA SYN_02359 serine phosphatase RsbU, regulator of sigma subunitchromosome CDS499993 1959 - 0.53803
NA SYN_02693 acetyltransferasechromosome CDS2601480 504 - 0.488095
NA SYN_01919 sigma-54-dependent transcriptional activatorchromosome CDS1969256 1569 - 0.474187
NA SYN_01852 snf2-related protein with C-terminal Helicasechromosome CDS1730101 3537 - 0.549336
NA SYN_02737 hypothetical transcriptional regulatory proteinchromosome CDS958113 420 + 0.542857
NA SYN_02373 transcription termination factor NusBchromosome CDS191723 486 - 0.495885
NA SYN_00019 cold shock DNA-binding domainchromosome CDS44429 531 + 0.542373
NA SYN_00981 response regulator with a winged-helix DNA-binding domainchromosome CDS1200162 738 + 0.544715
NA SYN_01601 DNA-directed RNA polymerase alpha chainchromosome CDS326987 1038 + 0.431599
NA SYN_02956 transcriptional regulator containing sigma 54 interaction domainchromosome CDS766633 2094 + 0.518147
NA SYN_00070 transcription antitermination proteinchromosome CDS299664 531 + 0.474576
NA SYN_00477 nickel-responsive regulatorchromosome CDS2095286 414 + 0.475845
NA SYN_01508 transcriptional regulator helix turn helixchromosome CDS1301022 354 + 0.485876
NA SYN_00017 superfamily II DNA/RNA helicase, SNF2 familychromosome CDS40382 3582 - 0.53713
NA SYN_02624 transcriptional regulator, MarR familychromosome CDS2840766 501 + 0.473054
NA SYN_01476 bacterial regulatory protein, LuxR familychromosome CDS1012519 909 - 0.455446
NA SYN_02743 transcriptional regulatorchromosome CDS953909 966 - 0.536232
NA SYN_00775 two-component response regulatorchromosome CDS2371227 648 + 0.5
NA SYN_00015 transcriptional regulator with HTH domainchromosome CDS39454 549 - 0.449909
NA SYN_01280 RNA polymerase subunitchromosome CDS290329 276 + 0.485507
NA SYN_02265 transcriptional regulator AsnC familychromosome CDS577375 474 + 0.550633
NA SYN_00341 transcriptional regulator, arsR familychromosome CDS2951107 375 + 0.541333
NA SYN_02759 transcription-repair coupling factorchromosome CDS926923 3609 - 0.59407
NA SYN_00064 DNA-directed RNA polymerase beta chainchromosome CDS302807 4092 + 0.478495
NA SYN_02924 bacterial regulatory protein, Fis familychromosome CDS854289 501 - 0.508982
NA SYN_00347 transcriptional regulator, ArsR familychromosome CDS2947797 339 - 0.442478
NA SYN_00850 transcriptional regulator, TetR familychromosome CDS2532686 711 - 0.56962
NA SYN_02121 transcriptional regulator, LysR familychromosome CDS1087753 960 + 0.534375
NA SYN_01633 nif-specific regulatory protein with sigma 54 interaction domainchromosome CDS3058831 1542 + 0.562905
NA SYN_00093 RNA 3'-terminal phosphate cyclasechromosome CDS2585093 1068 + 0.642322
NA SYN_01358 hypothetical membrane proteinchromosome CDS1133436 1146 - 0.504363
NA SYN_01881 transcriptional regulator, Cro/CI familychromosome CDS1764153 387 - 0.498708
NA SYN_00034 response regulator with a winged-helix DNA-binding domainchromosome CDS59594 444 - 0.522523
NA SYN_01298 superfamily II DNA and RNA helicaseschromosome CDS3116599 1719 + 0.535777
NA SYN_00342 transcriptional regulator, marR familychromosome CDS2950413 513 - 0.497076