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# Rhodopseudomonas palustris HaA2, HaA2

>RPB_2746 putative transcriptional regulator
MASLAEKRIVEFEPKVEHAEVSAEQQPQTRPEELRLLEALLFASTEPLEQ
SALAKRMPDGVDVKAALAQLQADYAHRGVNLVRIASKWTFRTAGDLAWLM
TRETTETRKLSRAAIEMLAIIAYHQPITRAEIEDIRGVVTSKGTLDVLLE
TGWIRPRGRRKTPGRPLTFGTTESFLSQFSLEALSDLPGLEELKGSGLLD
TRLPTGFNVPTPSDDPTLREDEDPLESGDLELALAPVADPETDEVGAAAQ
AAEAETAWTATVEAEVGESATGLAETPEDQPAEAEVGFAEAYEDGSDATD
TGATDEATLETLEHDEFDDETGASDAAETETAELDTAEADEAEAHDDNGD
GKGGHEPN
>RPB_4666 response regulator receiver sensor signal transduction histidine kinase
MADQDDILQLIEDTEPGPEPSNTKRWKIAVIDDDPAVHEGTRFALSDYNL
NGQTLEILSAYSGAEGRELMRANPDIAAVLLDVIMESDAAGLELVEFIRN
EMRNETVRIILRTGQPGQAPERRVIVDYDINDYKAKTELTADKLFTSLTA
ALRSYQQLERMVQTRRGLEIIIDAASTLYDFKSMQRLAEGVLTQIASLLN
VDCAGILVLRDAGDDFSVLAGSGCYSRFIGSAGIRPLDQDLRQMVEEAFR
RRKHEFADQRTVLYVRTGSGREVVVLLQAERELTDTDRSLVEIFGSRLSI
AFDNVILYKQLHEANTQLEDRVAQRTRALTQANRRLSTQWMRLQRANAFK
NEILGTVAHDLKNPLGVILGRTEMLTELIGADSPKENVIAQVDHIREATR
RLTSMVDHLISDAMADAFDISIRREAVDLAALVAEVAEANRPMAQNKQQA
ISVSIPDARMTMCDADRVREAIDNLVSNAIKYSPIGGKIALQVDGDDANT
VVRVTDEGAGLSPEDLSRLFGRFQRLSAKPTAGESSTGLGLSIVKKIIDM
HGGNVGAHSPGPGQGATFTITLPASPAS
>RPB_2557 transcriptional regulator, TetR family
MLTMIPTMMPNRHAAHDRPMAPPASDTRARMIEAAIEVFGSVGYDGATTR
QLAERAGVNQAAIPYHFGGKRELYLAAAQAIADYMRSRIEPLIDTLRTAS
VDPVGHIDAVVMRFFQFIAGNAEPEAWTVFFVRCERDADDAFRIIYYQSV
ARFQSALIAEVAAATGRSPNDEDLKIRTAIVLGAISNFRTLRNVMLSSLG
WDTFDAERTRKLEIAVRRLAQAELFGIRAEHEPIAEHSPRSAGSHPSPTA
>RPB_0033 transcriptional regulator, MarR family
MRFSAPARHIDSMLPFWQYTVMTDEAHAPFDHPANALVLEVFRLNGALIR
FGDALVKPLGLSSARWQVLGSIAHGRGTFSVARLADNMGLARQSVQRIVD
ELAEAGLVGFEANPAHKRAKLVVMTPRGERAFARATDLWRPVADAMAGGL
AARDLRKTIDNLAALRGRLEDQSENGSSA
>RPB_4056 transcriptional regulator, GntR family
MTIDPLALDRGAGARKAGAIAAAPGQPAVTIGKTTRAEELRRLLADEIVR
GALPPGAPLDETELAHRFKVSRTPVREALRQLVTSGLVESRPHHGAVVAK
PSFERLSGMFEAMAELEAMCAGFAAERMTPLERRDLEAIHDELRMLSHHG
NPERFHDVNERFHNAIYAGAHNDYIAEITLATRVRVQPFRRAQFRNLGRL
AKSQAEHDRVVVAIMRGDRNAAAAAMRGHIALVRDEYEIYAVSV
>RPB_0938 transcriptional regulator, MarR family
MQQSQHLIHSSRTIKSQPVARSPSSNPPITEHLAYLLAQANREINRQLEA
RLRDEGVPVEQWRILKVLSDGKGHSMGDLAEEVLLNHPTLTKMIDRMVSD
SLVYRVQAPDDRRKVLMYSSERGKALTQRLNALALSQEAHIAENYGDKAT
AELKRLLESLIDTAT
>RPB_4510 transcriptional regulator, LysR family
MDRLDCLRAFVKTMEGGSFSGAAKELGLGQPAVSKRIALLEKEFGSQLFM
RNTRKLTPTREAHRIYDLARQALSCIEMARASIAEAPAVPTGMLRLGVPS
SFGRHYIMPVIEQYLRDYPQVKVDIRFSEQTVNLVEDGIELALRIGDLES
SSLKARRIGLVRRFLVATPAYLRRQPQPQLPGDLKNLHCIAYARLSPANQ
WAFDSELGRHVVQISASIMVDDADAMKQAVLQNLGVAILPAWSAADAVRS
GEMEIVLPEFAVPALPLNAVYADTQWMSLRARCFLDLLIARSHRFSEDVD
GAGPPRRF
>RPB_2079 transcriptional regulator, GntR family
MAKSPRAPDRGAVIYKALWHAIIEQALQPGAKLPEDAIGEKFGASRTIVR
AALGRLAAEGLVELRRNRGAAVATPSWNEARDIFDVRIGLERLVVARLAG
RLTREQIRQLEQHVDAEQQARGSNVPLSIRLATAFHIRLAEMTGNPVLAR
YVSEVASRCGLILALYSRPHSADCAVSEHRAIIAALASGDATRATALMDH
HLDAVAERALIVPHAPEARDIQDILSPYAKEAALPKTRKAGAKKR
>RPB_4657 transcriptional regulator, XRE family with shikimate kinase activity
MTQSAESDASFLLELGQRVRTLRGLRGMSRKVLAKVSGISERYIAQLESG
KGNVSIMLLRRVSDALATPLEDLLPSGDPSIDWPVIRDLVRRATPVQIAH
AKDVLSGMGRLGAGARREHAFHGIALIGLRGAGKSTLGRMLADKIGWAFV
ELNKEIERQNGLSVAEIIALYGQEGFRRMEQAALAQLLARKELMVLATGG
GIVSEAITFDQILSSFYTIWLKAEPEEHMARVRGQGDLRPMADDRAAMQE
LRTILQSREPLYARASGVLDTAGLTVEAAAAKLTAMVSPVLCRDACAFGL
KNEAV
>RPB_2508 GCN5-related N-acetyltransferase
MYDALIAYLTGSKGTIRSLINQELPLLRDHLLRLDAESRRDRFNGYADEG
FIDRYAMKCGGDGTIIIAFFAEDGTVHAAAELHQPDLSTDSLPEIAFSVE
GHLRRKGIGSILFKQLMEVARSLGYENLRITTGSQNQAMRALANKFGAHL
TFRQGESTGTIDLKQEASGANQPTIEIPAGAASALIDFNQACWNLFLRMS
GINRAA
>RPB_4608 transcriptional regulator, TetR family
MDSDTKDRLTRSDWLAHGLRTLARHGANALKVGDLAAGLEVSRGSFYWHF
RDATDFRLQLLQLWQERATDQVFRDIDAAIVGPARLTHLMKLAFNEDRSL
DRAIRELAATDPTAAAMVASVDARRIDYLSKLMIESGVEGRRALPRAEFL
YWAYIGQTAVLNPAHTVVTESDIDDLSALFTR
>RPB_0902 transcriptional regulator, MarR family
MSKLDLFSFVPFQLNRLAAEVSAALAGEYQQRYGLDIPGWRILATLGFRD
DACTAQFISQCTRTHKSTISRAVTALLERELIERVENEDDRREFRLRLTA
KGRALYHELVPRLKRKEQEILSCLSARERTDLAAALGKIERHLDLIQASH
DQDQPAAIKPRLSAG
>RPB_4385 two component transcriptional regulator, winged helix family
MKHILVVDDDSRLRSMLVDYLTQHAFRASAAKDSHQLGQILANDPADLII
VDLNLGREDGLEIVRSHSTKSDAPIIIISGDRLDEADKVVGLELGASDYI
TKPFGLREFVARIRAALRVKSPAVLPDRSIYRFGDWMLNAKRRQLASRAA
GEVKLTAAEFNLLMAFLGAPKQVLSREQLLAASRVHNEEIFDRSIDVLIL
RLRRKLEPDPSNPKLIVTERGAGYVLDADVAVEHRPVGRKM
>RPB_3968 transcriptional regulator, LysR family
MSRQFKAVSIRQLRALAALAETGSITAAANRLHLTQPAVTLQLRNLQSLA
DIPLIQRRSDGMQLTDAGLEVLALCERIEAAISACETSLDMIAGKTAGRI
SIGAVSTAKYFVPFAISSFLKRHPKIDVRLSIGNRQDIGAALRGYDLDIA
IMGRPPVDLDVETHLIGDHPHVIIAPTAHRLARKQDIALAELADETFLTR
EPGSGTRSLMEQLFGNAGIRPNIGMEMASNETIKQAVIAGLGMAFLSAHT
VATELDERRLVILDVVGLPVVRQWFVVTRKDKVLLPPARAMLDFLKAEAS
HFLPRTDRRMRLTRPSTRGKRD
>RPB_1501 transcriptional regulator, AsnC family
MTTETDPIDRKILRHLVQDARISQVVLSERVGLSPTACTRRMLQLEKTGV
IRGYSADVDAAELGFTMTVLVHITLDKQSEDALSAFEREIVKCPDVVSCF
LMSGNDDYLVQVQARDMQDYERIHKQHLSRMPGVSRLHSSFVMRSVIERS
ISPAALGG
>RPB_3312 hypothetical protein
MAIKGEPNGLQASIPHRHRRDIQDLQRMPTMTESNYYAPGDGPLYRWNGK
PRTKKRTVTMPAGSVHPLVRLVFGEMSRQARRYDDVETASGVRRASIKAW
RKRNAPGLASITATLNTLGYDLVPVPAPEVIPTEIAPDLAALSSKLETTM
PDAWAAIVSFAANQQLAREAAAQTLAKIDAARPLN
>RPB_0957 transcriptional regulator, NifA, Fis Family
MAQREVRLVESEQSRQPMNQNPIPLSEIALTGIFEISKILTAPARLEVTL
ANVVNLLQSFLQMRNGVVSLLADDSVPDITVGVGWNEGSDNRYRARLPQK
AIDQIVATSVPLVADNVAAHPMFSAADALALGATDETRVSFIGVPIRIDS
RVVGTLTIDRVRDGQSIFRMDADVRFLTMVANLIGQTVKLHRVVARDRER
LMAESHRLQKELYELKPQRERKRVRVDGIVGESPAIRTLLAKVSIIAKSQ
SPVLLRGESGTGKELIAKAIHELSARANGPFIKINCAALPESVLESELFG
HEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEF
ERVGGNQTIKVNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPL
RDRPTDIPLLASEFLKNFNKENDRELQFEPHALELLKACSFPGNVRELEN
CVRRTATLAIGPEITDSDFACHQDECLSAILWKGHAEPAPVRPRPQIPLQ
VMPRKAPLEVVAPREAVSVSPDPVSTPMSAESANGGPMSERERLVNAMER
SGWVQAKAARLLGLTPRQIGYALKKYDIELKHF
>RPB_1513 transcriptional regulator, AsnC family
MRGTICRPDRNTGFRRVSKSLDQIDLKILQEIQEDGRITNVELAKRVGIS
PPPCLRRVRTLEEEGYIQGYRGLLDPALLGFDVTVFASVHLASQAEADLR
GFEEFVRNEPLVRECWMLSGEVDFILKCVAPDMATFQNFVAHLTAAPHVR
NVRTSLVLRNSKYAPAVPLELKAAAT
>RPB_2286 DNA-directed RNA polymerase, subunit beta-prime
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTF
KPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRR
ERMGHIELAAPVAHIWFLKSLPSRIGQLLDMTLKDLERILYFEYYVVLEP
GLTDLKERQLLSEEEYLRAQDQYGQDSFTAMIGAEAIRELLKGLELEKID
AQLRVEMAETDSDIKHKKLAKRLKIVEAFRFSGNKPEWMILTVVPVIPPD
LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVD
YSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAK
KLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQ
LHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQP
IIVPSQDIVLGLYYLSILREGLPGEGKVFGDLAELEHALFSKVIHLHTKI
KYRWDSLDDEGKPYQRLIETTAGRILLGQVLPKSVKLPFEVINKLMTKRE
ISSVIDQVYRHCGQKETVIFCDRIMALGFFNAFKAGISFGKDDMVVPASK
WKIVDTTRTLAKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKEMMKE
ISAVRKNASGAETQVNSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEI
IETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA
QDCIITQDDCGTSLGIKMRAIIDAGTVVASLGSRILGRTAGEDVRDPQTN
EVIVKKGQLMEERDVEAIHQAGVQEVKIRSALTCELVNGICGKCYGRDLA
RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSVIESNFE
GKVVIKNKAIARNGENHSVAMVRNMVVAIVDPDGTERATHRIQYGARMHV
DEGDTVKRGQRIAEWDPYSRPVLTEVEGTIDFEDLVEDQSISETLDESTG
IAKRIVIDWRSTRGGADLRPAIVVKGKDGKVLKLARGGDARYMLSVDAIL
SVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARKPKDAAIIA
EIAGTIRFGRDYKNKRRISIEPMDSEEEAREYLIPKGKHIHLQDGDIVEK
GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVI
VRQMLQKVEITDQGETDMISGEQIDKIEFDQLNAKARDEGKKIATGTPVL
LGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRL
IPAGTGASMAKLREVAMKRDRMILDEREKQATIVPPAAPEAEPLALPPVE
>RPB_2067 ROK
MSAIFAVDLGATWLRTARVAPDGRWIDRKARVPTPDGPAEARKLIETAWR
RAGCAEAVALATAPELDSDGVVRRWPNRRDYEGAPLLTDALRCVARLALF
DDATAAALSADDVDGAADAITLCLSIGSGIGGGVVIAGRPLVGAHHAAMD
AGHMPVPSAAGLRCACGRDGCLQAVASGGALQRHGGGALFGDARAEPALH
RATAALAEALAILQALFDPERVVIAGGLGLSPLFDRIAAELKRSGVALAI
APHHHGDDAALVGAAIGLARGLAPRASTSAAISPPAARGDPRCKVSSPNG
YQPGRVSTTRTSGA
>RPB_1921 transcriptional regulator, AbrB family
MSSTVTIKGQVTLPKKVRDTAGIKPGDKVEIRNTASGGIYIGKSGSEREY
LTKLQSIAKRYPIRGNTDEIMRELRGDPADDYKK
>RPB_4551 GreA/GreB family elongation factor
MIQSVVCQRPPIVLRSRDAERLGQLAEAAAQRHPATADFLAGEVARAAVT
PDGEPLPGIVCMDSELTFRDESTGKEKQVTLVYPPDADVEAGRISVLTPI
GAALIGLSVGQSITFETPSGERRSLTVLSVSEPN
>RPB_0388 parB-like partition proteins
MADEHRSRLGRGLASLIGDVGGEAAHVERPRAQRKVPIEFIKANPRNPRR
SFTDAELGELSDSIKQHGVIQPIVVRPVKGTNDRFEIIAGERRWRAAQRA
GLHEVPIVPVDVSDALALEIAIVENVQRENLNPLEEAQGYHALANEFKRS
QDEIAKIVGKSRSHVANMMRLTKLPDDVLELIAAGQLSAGHARALIGVPD
PSAAAKRIVAEGLNVRQTEALAHDEGVPERKPQKPRASASAKPAKDADTL
ALEKRVSDALGMKVTIDDRDGTGSLQIRYADLDQLDDIIRRLEAGG
>RPB_3926 putative transcriptional regulator
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGM
SAVAKAAGVTREGLYKTLGENGNPEFATVLRVFGAMGIRLTAEPAGAKPR
KKAVA
>RPB_1805 transcriptional regulator, TetR family
MSWRKEERRAERGYHHGNLKEALLQAALGLIAEKGPAGFTFADAARMAGV
SPAAPYRHFRDREELLSNIAYRGFELFEQVLAKAWDDGRPDTLTAFKRVG
SAYLAFARSEPAYYSAMFESGVPVDANPLLMTASERAFNVIRAAAERLAA
LTPPGVARPPALMMALHIWSMSHGIASLFARGDAARRKLPMAAEELLEAG
VLIYLRGLGFPADLRSQPEKPAEPKRSGPWGAAPQ
>RPB_2232 sigma-24 (FecI-like)
MSVVSKLRLRALLEANYQQFRLRLRRRLGSDAMAMEVLHDTWLRLDRIGD
ASAVQKPAAYLFRMALNEASDRREADARKLSAAEIETLRHMSDQMLDPEQ
IAQARREVTQLAAALDELPPRRKAIVLLARVHEMKHTDIAVHFGISPRMV
EKELVQALEHCARRLERKVVRRFGPRSQKPS
>RPB_4402 GCN5-related N-acetyltransferase
MDVTIRAMRSEDAVEIFEIVNQRAFRFWTLSLPYESFDTIKKWLEPQSPR
DLHFSAELDGRVVGASALRPFYGRRAHAAEFWIGVHEDYARRGIGTRLLA
AMIDTADNWLNIKRIEMTVFTDNIGALALYSNFGFEIEGTHKAATFREGA
FVDAHCMARLR
>RPB_3277 RNA binding S1
MPSIRRSAGASSTHRAHCFERPPVPKIASIIAAELAVREEQVQAAIDLLD
GGSTVPFIARYRKEATGMLDDVQLRALEERLGYLREMDARRIAIIDSIKQ
QGKLTPEIEKALLAADTKARLEDIYLPFKEKRRTKAQIAREAGLEPLAEM
LLTNPDKHPETEAAAFVKTDGEHPVADVKAALEGARAILVERFSEHADLT
GSLREAIWSRGQLKASVRTGKKTEGAKFADYFDFSEPYQKLPSHRILALL
RGEKEEILTLDFGDGEDPDSKEPTQYENRIAATFGIARKGRPGDAFLSDC
VRWAWRTRIKTGLALDTRMRLWQQAEKEAVRVFAANLRDLLLAAPAGGRA
TLGLDPGFRTGVKVAVIDQTGKFVDHTTIYPHEPARKWNESMLELAQLCI
KHRIELVAIGNGTASRETEKLVTDLMKLKPELKLTKAIVSEAGASVYSAS
EFASKEFPDLDVSIRGAVSIARRLQDPLGELVKVPPQSIGVGQYQHDLNQ
HVLSRALDATVEDCVNAVGVDLNTASAPLLERVSGIGETLAANIVAHRDG
NGPFPSRAKLKEVPRLGPKAFEQCAGFLRIRDGENPLDASGVHPEAYPLV
KKILAATKSDIKAIIGQTKTLQSLQPASFADDKFGIPTVTDILKELEKPG
RDPRPEFKTATFQEGVEKITDLKPGMILEATVTNVAAFGAFADIGVHQDG
LIHISAMSERRINDPREVVKPGQVVKVKVLEVDVPRNRIGLTLRLSDPIP
APGERRKDGGGNAKLVDRYRPKPEPKSTGGGAFAAALAKAAENSKGRSK
>RPB_0455 sigma 32 (RpoH)
MARAATLPVLNGESGLARYLAEIRKFPMLEPQQEYMFAKRWREHDDRDAA
HHLVTSHLRLVAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPDKGFR
LATYAMWWIKASIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALD
EGDMHPDQVKLIAKRLGVTEQDVIDMNRRLGGDASLNAPIRDDGEPGEWQ
DWLVDQSPNQEAVMAEHEELDHRRAALNGAIGVLNPRERRIFEARRLADE
PMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGTIARQEQAALEAAH
>RPB_3412 transcriptional regulator, TetR family
MPPEAKKRARRKAERPAEILDAAFEEFVKHGYSATRLEDVAALAGVTKGT
IYFYFDTKERVFEEMVRHKSMEFLPRLGDYAATLTGSHTDRLRAMVVFAY
AHISENRASREILRFLISEGARFPDLVDRHYEEFVEPMMQHFKKVIDAGV
AAGEFRDAPATEFVEIVMSPALLISLWSLLFGTRKRFDMDSFTEASTDLL
LRGLIR
>RPB_0655 sigma-54 (RpoN)
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLATFVEDELEKNPLLD
RASDNAEPPVAGEAVMERAEASGDDFGGSESSGDGSDFSDGVGSDSFEPG
AEDWMHRDLGSRSEIEQTLDTGMENVFPEEPAEAAARAAQDAAPASYTEW
GGGASSDEGYNLEAFVAAETSLADRLAEQLAVALTAPSQRMIGQYLIDLV
DDAGYLPPDLGDAAERLGTTQAEVEAVVAVLQTFDPPGICARSLAECLAI
QLRELDRFDPAMQALVENLDLLAKRDIASLRKLCGVDDEDLADMIGEIRH
LDPKPGLKFASSRVQTVVPDVFVRPGPDGGWLVELNSDTLPKVLVNQSYY
SELSKTIRKDGDKSYFSDCLQNATWLVRALDQRARTILKVATEIVRQQDG
FFTHGVAHLRPLNLKAVADAIQMHESTVSRVTANKYMATNRGTFELKYFF
TASIASADGGEAHSAEAVRHHIRQLIDGEEPTAILSDDTIVERLREAGIE
IARRTVAKYREAMRIPSSVQRRRDKQSMLGTALAAPADRSRDTAPA
>RPB_0690 transcriptional regulator, LysR family
MNETNESLDLNLLRVFLAIWDLRSLTAAGDRLGLTQPAISHALRRLRDRF
NDPLFVRAANRMLPTDAAVRLHEPLDQAFAIINRALKERVAFDPQVTQRT
FRIAMSDIAEVYSLPQLMTKLTRIAPLARIDVVPLAPDAVVGAMRSGEVD
LAIGYVKNGEEDCSSIDIFNDRFVCIVRAGHPIGRTGLRKSNCAGLRFFY
ARITSPVHHQPIEQWFSDRGAGPQIAVRGHFMVAPEIVRHSDLAAIFPES
LALRLHRAKDFRLLDLPFDLPLIEVKVHSHSRFASDMGIKWMCETAAKIL
KEDG
>RPB_0235 transcriptional regulator, GntR family
MAATYRRPATGSDGTHERRFAPRTLPDQVAEELGAEIVSGRRKAGERLVE
LDLARDFGVSRGPIREAIRILERRRLVELLPRRGAYIKPVSLKSVADLFN
VRTALSMLAVRTMATTPVESYIDTLARRCAELKAQVEPDDPIAFARTTTR
AVKTIARGSGNQLLVELLTDLADQTVWTTIWKSPLDYQTPEIRRLSADLM
ASTLKAIRQRRPNAAVTHLGELLEGDRDRALATLSQIRGEAFDLSALAHV
DETGAAPTTIAGSARTA
>RPB_0393 transcription termination factor Rho
MREMKLSDLKAKTPAELVSFAEELGVENASTMRKQELMFACLKQLSAKET
DIIGEGVVEVLSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTI
EGHIRSPKEGERYFALLKVNTLNFEDPEKSKHKVNFDNLTPLFPDERFRL
EIDDPTRKDLSARVIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAHSITA
NHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHVQVAEMVI
EKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDR
KVSDKRTFPAIDISRSGTRKEELITDPQLLKKMYVLRRILNPMGTMDAID
FLLDKLRNTKNNAEFFESMNT
>RPB_1134 transcriptional regulator, AraC family
MRLRRVVRFLLRDPGVSFGSVDMSASGTIACGPVQQLLVALARSRPESAG
INARVGISRATLDDPSGMLPLAAFTSMLEAAAHESGNRTLGIELGRDFKL
AALGPISDLMRTAQTVGDALESFSGFFASIQTSTRTTLSVSDGIARLSYA
IEDPAIRFREQDAGFSLAIEYSMLAGFLGPAWRASGVEFEHAAGDDLPFY
QQHFDCPLRFGRRENALLFQARCLDVPLQQADRNLHARLRADLAEVIQRR
ATRLDLVRGIEAWIAASLCRSVATDIEVVACDFGMSTRSFQRRLADHGVN
YLDIRNRVRSHIAKCMLAETGAPVTSIALQLGYSETSAFSRGFKSQVGET
PVEFRKRRRGIDPAAAAAA
>RPB_4651 hypothetical protein
MRAPQMLRPARHRETQIRHRGGELRSKPSASLRSRRQRNVRLPYTVTATR
QDEKMQSVRNSSLIALAKARVWESEGWRVMIATPDGRQHDIAQLDELTAF
KPEKLTALSTILPADEAVSPKADTVDLAAADSPGFHIAEMHGPWPDGVHG
PWRPHSQDTATVQTEELLSS
>RPB_3438 transcriptional regulator, AraC family
MASLPRLFYVTSSLDEATALATWSAVISPLFEPRPCGPSKKTPTGSAYGI
IIGDLIIAKVAFNAQDFVRDEPRIAATPDHLLLHLYVTGGFNGVVTRQQT
AIGPGKVALIDLAHPIATRAFASSTVCLIVPRKLLGGLPLDTLKPRLDPL
RNDLLAAHLRSLQERSAQLTETDVADTVADTVGFLRRLLAPAQDESPAAE
QRTDETILALLEALIRDNLASPDLSPDWLAQRLDVSRASLYRLFADRGGI
MRYVQERRLLAVQAALSDPIETRRLSRLASDLGFKSEAHFSRSFRARFGV
TASAFRKAQLDASAAIQLTSPAVVQQWWTAVARSPPARGLAPADERGAVL
PL
>RPB_0007 transcriptional regulator, AsnC family
MSDADVPVAETVRRLDAIDRKILTVLQQDASLSVAEIGDRVGLSSTPCWK
RIQRLEADGVITRRVALVDQDKIGLGLSVFVSIESGDHSEAWLKTFADAV
SAMPEVIEFYRMAGDVDYMLRVVVADMRAYDVFYKRLISTVPLKNVTSRF
AMEKIKSVTALPVPPMSAA
>RPB_4624 putative phage repressor
MQMLTHDQIWTALDRLAERSGLSPSGLAKKSGLDPTTFNKSKRITNDGRE
RWPSTESVAKALAATNTAIDTFVQLITDRPRVVQSVPLLGLAQAGAGGFF
DDGGFPAGKGWDEIGLPSINDEHAYALEISGESMKPAYRDGDIIVVSPGT
AIRRGDRVVVKTTSGEVMVKELKRRTTKIVELASLNPSHPDRTLAPADVE
WIARIVWASQ
>RPB_2693 putative transcriptional regulator
MQVDTPSISARDCGLDTTFQVLRGKWKPFILHVLLRGPKRFGELKRAVRH
ASEKVLTQQLRELEADGLVKRTDYKEVPPRVDYALSPIGETLAHALEPLR
KWGDDNARLFDGVVTKRPRRDNADSTSKPAFDNLTTAVTTINTPMPFRID
EKTLIACLKGEVSDPRWRVYVQALFDEVDVSVIHKLVLDRLVTFNDLSKA
IDIWRVRESENERWVREMASFEVARPDAESPGRAR
>RPB_2973 Negative transcriptional regulator
MYVPPPFKSDRSQCLAFAAARGFGLVCAHDGRKPVASPLPFAVGYSSNGT
PLLSFHVARGNPLAALADSRTSWLMAVSGPGAYVSADWYASPDQVPTWLY
QSVHLTGAAAVMSEAELDSHLDEVSAVFESSLAPKRPWTAAKMTAGRRSA
MKKAIVGVMMRVDLVEGSFKLNQHKSDADHVAVAIALARQGDPAAQEIAA
QMIALRPQLDYIEPATAFAPAL
>RPB_4174 transcriptional regulator, MarR family
MADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDAD
HVLEAFGFGRAHHRVVHFVCRYPGLTVADLLDVLRITKQSLGRVLKQLLD
EGYIVQKAGDNDRRQRLLFATAKGEALVVKLAGLQTDRIARALRGFSPGE
AEAVRKFLRAMIDCDDPDKVLQTILQSDGAVAKDVT
>RPB_4088 transcriptional regulator, GntR family
MTTLEPDSGVALWRKVADSIERGIADGHYAAGEKLPGEVEIAQAHRVNRH
TVRRALAALAERGLVRAERGSGTYVETSRIAYPLRSRTRFSEIVGAGGHE
PRGRLLAASREAATKDLARQLDLAAGAPLIRIEGLRLADRAPICVGTTWC
SAERFPEAETLYRRFGSMTKVLAQYGVCDYRRASTRITAAIADAGDAARL
DLGIGRPVLIVEALDVDGEGHPLLAIRSRFAAERVQFVVETE
>RPB_1793 DEAD/DEAH box helicase
MERTNLLTSFQDFGLADPISRALQEENYTVPTPIQAQTIPLALAGRDVVG
IAQTGTGKTASFALPILHRILENRIKPQPKTCRVLVLSPTRELSGQILDS
FNAYGRHIRLSATLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNA
LRLGQVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDI
ADLAEQMLRDPARVAVTPVASTVERINQRVIHLDHSAKPAMLATILQQDG
VNQALVFTRTKHGADKVVKGLQRAGITADAIHGNKSQNYRERVLAAFRTG
ELRTLVATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGAEGT
AISLCAGGEETGYLRDIEKLIRIALPKEDHRTPGAKPAPSTAPQRGGQRN
GQQRNGQQRSGGQRNGAAPHAARGDAAPGSNDPRRPRRAGGPNAGRNPDA
ARHEPAVRPQHGGQAEGLQGVAFLQRKNDRPAKTTNQRPQR
>RPB_2985 DEAD/DEAH box helicase
MSFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTG
KTAAFVLPMLTMLEKGRARARMPRTLILEPTRELAAQVKEQFDKYGAGQK
LNVALLIGGVSFGDQDLKLTRGVDVLIATPGRLLDHTERGGLLLTGVEML
IIDEADRMLDMGFIPDIERVCKLVPFTRQTLFFTATMPPEIRRVTETFLH
NPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRSLIRAATDLQNAII
FCNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKGELPILV
ASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRVGRTGRAGRLGTAISIVA
PSDQKSIAAIEKLIGKEIPRVDAGPVGEADREQAEDTDRPARSSRRSSES
RSREVRGEDRPARESRGPRREPRGEGRGEARPAREPREARAPVEAREAPR
EVREPREPREARKPRREPRNAPAAPAAAPAAHASFGSAPPARDLSSEPGD
HSHLPAFLLRPVRARG
>RPB_2689 putative transcriptional regulator
MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGL
TDGNLSRHLQVLQEAGMVEVSKGYEANRPLTTCRLTKTGRRQFLDYLTVL
EQLVRDAAKAAGSSDPLPTGLHTRPV
>RPB_1700 transcriptional regulator, LysR family
MDRLDAMAAFVAVADLNGFAPAARKLGLSPSAVTRLVAALEQRVGARLLQ
RTTRSVALTDIGARYLERVKRILSDVEEAEASASAERIDPSGRLVVSAPV
GFGRLHVAPLMSDYLLRYPDVAGELRLSDRIINLVEDGVDCAVRIGPLAD
SSLVARQLGTMRRIVVASPDYLGARGVPMVPAEVAAHDTVHFGAITSTVT
WRFVVDGRDVRVACTPRFATNAADAAILYAERGGGLTRVLAYQAAEAIRT
GRLQVVLADYEAPPLPITIVYPTSRLLSAKVRTFVDLAAEICDWRFGAG
>RPB_4079 transcriptional regulator, TetR family
MSNISHRRWSQSATLHGCMMDGRPANDQSPWMPFESRRRARDEKREAVLR
TAVQLFLEQGYHRATLNEVAERLNITKPALYNYFRSKDEILFECWALGQE
QVDEFIAVINRSGQNGLGKLRALVRAYAGTMATDFGASLVRFDPRDLKPH
NAQTVRDAKRSIDRTFRRYIAEGIADKSIKPCDPKLAAFAIAGSLNWIGH
WYQRGGPLTPDAIADEFAVRLTEGLAAPSIKKSVVKAPTATKKK
>RPB_1050 transcriptional regulator, ArsR family
MPVPKRARRPSTDGLTHVDTGELRDNALVASEFLKTLSNPSRLVMLCLLA
EGERSVSELATTLDERQPTVSQQLARLRGERLVETRRDGQQVFYSLASDE
VRSLILVLHAIFCAKPRGKAAKVTVLRPVKTVAAKKTAARR
>RPB_4598 transcriptional regulator, MarR family
MRVHGRLAIAAFAGPALEFARTMDGAMKRKPSTEATAAWVRLMRVRSRVL
DAVELELKKAGFPPLAWYDALLELSRAPAGEMRPVELEKQMLIPQYSTSR
LIDRLVDEGLAARRECKMDKRGQFVEITEAGRELQKKMWAAYSAAIEKHV
GSKLSDADALRLCGLLDRLGCSCDGAAATPAARDTASSR
>RPB_1210 sigma-24 (FecI-like)
MESQVGAIGAMNEFRDGVEAMIPALRRYARALARDTDIADDLVQDTLVRA
LRSEKLFLGGDLRSWLYTILTNLNRNRRRALARRPTLMPWTDTGADASGT
EAEGGDIARALATLVEEQRAALLLVALEGLSYREVADIQGVPIGTVMSRL
ARARAHIRASLDGEKPMLRRVK
>RPB_1644 transcriptional regulator, ArsR family
MDPIDILSALAEETRLEALRLLWDGQEHCVCELMKRLGASQSRMSRHMGV
LKVAGLVIDRRDAQWVRYRRNPNLDPKIIAVVEAVLALPARDRRAAA
>RPB_4378 transcriptional regulator, ArsR family
MTSILDPDIETEFRDGAEYSPELDMLMRRARKASSFLKAVSHENRLLLLC
LLAERERSVSELENILSLRQSAVSQQLARLRYDGMVDTRRDGKTIYYSLA
NDDVRRVISVIYDIFCSSARGGEQK
>RPB_3220 GCN5-related N-acetyltransferase
MSMTSPRWRPMTAADLAAVNAIAAQVHVAFPEDPAIFAERLALYPAGCFV
LDREPDGIGGYVVSHPWRIAEPPALDTLLGRLPAPASTYYIHDLALLPQG
RGLGAGAAIVARLLRHAVAAGLSNISLVAVSGSVAFWRSQGFDVMETQAL
APKLASYGADARYMVCTAETG
>RPB_0426 negative regulator of class I heat shock protein
MAHHEPIGLIAPNTGLAQLNERSRDIFRQIVESYLATGEPVGSRNISRLI
SMPLSPASVRNVMADLEQLGLIYAPHTSAGRLPTELGLRFFVDALMQVGD
LTEPERQSIQAQLSSVGRAQTVEAALGEALTRLSGLTRAAAVVLTAKSNV
RLKHLEFVRLEPERALVILVAEDGQVENRVLALPPGVPSSALTEASNFLN
ARIRGRTLAEARLELETMLSQDRTELDQLTQKVISAGIASWSGGDGEDRQ
LIVRGHANLLEDLHAMEDLERVRRLFDDLETKRGVVDLLGRAESAEGVRI
FIGSENKLFSLSGSSTIIAPYSDGAGHIVGVLGVIGPTRLNYARVIPMVD
YTARIVSQMLGG
>RPB_2938 cold-shock DNA-binding domain protein
MGSDGFESKKPGVMATGGAGRSGAVEFAPRDEFTHRDGVGAAFAGIGETA
NLVEIGGVIKWFDASKGYGFIVPDNGAADVLLHVTVLRRDGYQTAYEGAR
IVVECVQRAKGYQAFRVVSMDESTAIHPAQMLPPRTHVSVTPTSGLERAQ
VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPG
SKGMMAAEIQPENGAPGLSSH
>RPB_3241 transcriptional regulator, ArsR family
MVQFVHPARDDISLEGVLGALSDPMRLRIVKALLAEGDCLSCSAAAPCPE
MAKSTLSNHFRVLRDAGLIQTTKKGVENRNTVREADINARFPGLLKAILK
HAGE
>RPB_0125 transcriptional regulator, TetR family
MASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAE
FAREGYGGARVDRISKAAKSNDRMLYYYFVSKEKLFHHVIEHCYAQLVAS
EEALDLDLTRPREALAALVAFNWQYYWENPELLSILASENLFKGRHVKNK
IRDVFANAQFGLLERILNAGIDRRDFRPDCDRTFIYLSILSLTYFYRSNL
YTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR
>RPB_4694 two component transcriptional regulator, winged helix family
MRVLVAEDDSRIAADLARGLTEAGYIAECVADGEEAWFRGDTEDYAAIIL
DLGLPRLDGLTILKRWREAGRRTPVLILTARGSWAERVDGIDAGADDYLP
KPFQMEELLARLRSIVRRSAGHASSVVCIGDLTLDERQMQVSLRGQKVAL
SPLEYRLASYLVLHRGRVVSQFELNENIYGQDDAHDSNAIEVLVGRVRKK
LGPELIETRRGFGYIVPGDGT
>RPB_1653 transcriptional regulator, GntR family
MRTMSPPVGLPALAATDLVGQVARALTLAILQGRLPPGSKVVEAGIAREL
GVSRAPVREAARLLESQGLLVASPRRGFFVRQFAADDIDDIFDLRLCVER
HAGVLAARKLTPATRDALRRQIDVLHQTANLDDPARQVEEDYRFHRLICE
IAGNRRLLRLFDDLASELRMVIGLIGRLYDDPHEIARTHEPVLAAIEQGH
PERIVAHIDYHIGHAWREVAKLVREIPPATAGGKIRSV
>RPB_1179 cold-shock DNA-binding domain protein
MPNTGTVKFFNGERGYGFIKPDDGGRDVFVHITAVERAGLKDLTEGQRIS
FEVEPDKKGKGPKAVNLVIS
>RPB_3770 transcriptional regulator, LysR family
MDRFEAMSVLLAVVDAGSLSAGARRLHAPLATISRKVGELEKHLGVRLVR
RTSRGLTLTEEGRAFVAASRRILEELETAERQAAGDYGALRGALHVTAPV
AFGERHLLPIALDFLKQQPEINLRLTLADQQVSLADAQIDVALRIGHLAD
SALIGTRVGTVRRVLCASPDYLARRGVPRRPDDLAGHDGISFQGFATAPE
WRYRRDSAAFAVDPRPKLAVNTTEAAIQSALAGVGIIRVLSYQVSDQLRA
GQLRELLPDFAPEPLPVNLIHAPAVPLPPKVRSFLDWTAPRLRAGIGQWS
D
>RPB_0822 transcriptional regulator, LysR family
MDKSAITIERIRTFVRIAERGSLSAVARDLNVGQSTVTRQLQELEAAIGA
PLLSRTTRRVTLTEEGSRYYARCVQILRLLEQAGDEALGASGAQAGTIRI
SCTASFGILHVCRLIFAFQDRYPEIGVDLGLTDHRIDLVREGVDLALRLA
PLTESSMKLRTLGHSQRLLVASPDYLSAHGRPTSPHDLSGHQGVRMMNVA
GSDMLVLQGPGEETHRVPFGGKLRVDHGLAAREAMIAGRGIAATHRWLVD
DLLAAGRLEVILPEYRLAAVPLNLLIVPERAGIARVRLLIDFLVEQIRTV
PGIA
>RPB_0879 transcriptional regulator, LysR family
MNLKQLEYFMRVAELGSFSKAAMMLDIAQPALSRQVRGLETELNQQLFLR
NGRGVALTEAGRRLFDHSVGIMQMVAHAREDLGASRDAPVGRVTIGLPPS
IGRQLTLPLIDRFKRELPAARLAIVEGLSSHIVEWVTTGRADVGLVYNPE
AQSGIDITPLLQEPLGLVSRAPKGKRGQPAPPLPFKELSAYPLIVPERVH
AMRRLLETQAALAGVKLDIAWEVSSVPSIIELVCAGYGHAVLTASGVAAS
PRAAELSSRRLIDPAATSALCLAVSATRRPTPLAQYTMRLLTELARSLPN
>RPB_4063 transcriptional regulator, GntR family
MRKINASSDADRHAHGMDLSIDSHVPKYAQIADIFRQRIARGSWSRGMRL
PANEALAEEFGVSRVTIRQAVELLARDGILEAQQGRGTFITGQVKQDRWL
KVETSLSDLAEVYQDTSPEIINIAESISKAPLIEADGKAAARYVFMRRVH
SRGGQPYCVISIYLDETIFRRSPAKFRKQTVIPILKDLKNPAIASARQTL
TIGTADLEVARLLRVPLNSPVAEVRRVFTAADRTVIYLGEVTYRGDFVRI
DMDLRP
>RPB_3321 transcriptional regulator, LuxR family
MSRGALEDTLTFVAALDRANTPDIVADKLLGVVRPFGYSQVLAGIIPTPR
TSVKQQIANVVLHRWPLRWSERYFSRGYLFEDPTIRRVSTSSEPFVWSEL
QVGPDARANEIMREAGEFGLGCGFTVPMITLDGQSAGLSIAGDRAELPPS
HRGMVQLVAMYAFLRSLKLGEKPTPAITLTKREADVLHWIAEGKTDWEIS
KILRVSEHLVDKMARQIRTKLGAVNRIQAVALAMRSGIIR
>RPB_3045 transcriptional regulator, AraC family
MSDASASAIVPDYPLNRTPVVHTTDIAEMRHALINFYGARAFSAEAEGFE
GFGSFVKLDVTAFGFCRYASQAVAEFSETDFARLQIALCGTGRTTSGGSS
VEVDPSRWCVSSPGAPTVLEFGADYEQLIIRFSNEKLMATLEAMLGVKPR
GRLVFAPSVRIDDCGARALRDLGLFLARHVDPAQAPLPPLMLRELEHTLM
VSLLSVARHNFSDQLDRDAPDCAPDYVRVAEEFIAASWNRAITINDLAAV
TNVGVRSLFKSFQKHRGYSPMAFAKTVRLNKAREMLLQGDPSRSVTSVAF
ACGFSNLGHFAHDYRQKHGELPSETLARAR
>RPB_2635 Protein of unknown function DUF193
MRCPNCNSLDTQVKDSRPTEDSSVIRRRRVCIACNFRFTTFERVQLRELT
VIKRNGRRVPFDRDKLVRSLQISLRKRPVEPERVEQMVSAIVRELESGGE
ADISSETIGEIVMDHLRKLDDVAYVRFASVYRNFREAKDFEAVLGELSGE
EEARPALVRK
>RPB_1970 transcriptional regulator, ArsR family, ArsR1
MDSENAILALGALAQATRLEAFRLLAAHEPDGMAAGAIADALAVPQNTMS
SHLAILARAGLISARRHSRSIVYRADLARFQQIALFLIKDCCGGSPELCA
PLIADLQPRCAPPAKTAARSRARAASR
>RPB_2319 DNA-directed RNA polymerase, alpha subunit
MTIQKNWQELIRPNKLQVTAGSDATRFATLVAEPLERGFGQTLGNALRRV
LLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISLKMQGEG
PKRMVVKKQGPGVVTAGDIQTVGDIVVLNPDLQICTLDEGAEIRMEFTVN
TGKGYVAAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDK
LTMTVETNGALTPDDAVAFAARILQDQLNVFVNFEEPRKEVTQEIIPDLA
FNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
>RPB_1301 putative transcriptional regulator, XRE family
MRAARALLGIDQRALAKLAGVSVPTIQRMEASDGNVRGIVESLTRVVDAL
NRAGVELIGERARSEDGGRGVRLRQASPPAGRDDA
>RPB_2964 GCN5-related N-acetyltransferase
MAVEIRPVGPDERAAWEPLWAGYLEFYKATLAPGTSDVTWARFHDAAEPM
YLLGAYVDGRLTGIVQFLYHRSCWTAGDYCYLQDLFVADSARGLGLGRKL
IEAVYARAKADGCSRVHWLTQTGNATARLLYDRIADDSGFMQYRKIL
>RPB_2144 transcriptional regulator, MarR family
MPNRQNARKLAAADAAPARATAENDHRLSYQVIWDFVSISNNLEDMRRAW
AKLFGISGSQWLILMAISDLDQGNGVSVGDVSDKIHAVSTFVTTQTKILE
RLGLINRVSSTTDARVVLMSLSETAQTKMTELKPRWEALHEYIFRDFDAE
ALHDVKAKLDMLKRRTKVAMQRVADDN
>RPB_2116 transcriptional regulator, TetR family
MRYSKEHKLETHARIVRKASVRLREKGAHGIGVADLMKDAGLTHGGFYAH
FASREQLVIEAFAYAMDRANERWRKLAEDTPPREMLAIVVNNYLSAAHRD
DPGRGCAVPALGAEIARESPKTRRAFAAKLEQMIATMATRFDDVPPKIAR
KQAMATLATMMGALLMSRVAGTGELSDAILEAGRDAVLGRATPAKPRPAR
KPAATAVSRTRSKAASPR
>RPB_3442 two component transcriptional regulator, winged helix family
MVPETVKLASESESHMRLLIIEDDRESADYLVKAFREVGHVADLASDGEE
GLALADSGDYDVLVIDRMLPKRDGLSVIGTLRDKGNRTPALILSALGQVD
DRIKGLRAGGDDYLPKPYAFAELLARVEVLSRRHGGPAEETSYRVGDLEL
DRLSHRVTRGSEELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFD
PQTNVIDVHISRLRGKIDKGFDRPLLHTIRGAGYMIRDGIR
>RPB_3860 serine/threonine protein kinase
MTGMDQPSFEPGSTVDGYLIEGPLHRGGMAELFAVRRADNPMPMVMKIPR
TGEGEDPAAIVSFEMEQMLMPRLNGPHVPQFVALADFSTQPYIVMERIAG
EPLLSRLPDLPLPYDEAAGIAAKIAAAVADLHRQHVIHHDIKPSNIMFRP
SGEAVLLDMGLACSDQLPDLMQEEFRLPFGTAPYMAPERLLGVRNDPRSD
LFGLGVLLYFFTTGIRPFGETETMYGMRRRLWRDPVPPRKLRPDYPPWLQ
EIVLRCLEIQPQWRYPTAAQLVFDLTHPTEVKLTTRSEKLRRDPWKTVLR
RRFNKELTRPRQETLAAHLASAPIIAVAIDIAEGSAALNDELRVTAGRIL
ATLPSARLACLNVLKLGRMTIDRTLDEHGHNKHVDRLVALRHWAEPLKLD
DDRLTAHVLEAVDPASAILEFAQASRVDHILIGARRNSVLRTLAGSVSAK
VAGEANCTVTIVRAAAAPARPSRRPSVSQDNRDDQA
>RPB_4482 transcriptional regulator, XRE family
MAIVVNLDVMLARRKMRSKELAERIGITEQNVSLLKSGKVKGIRFDTLER
ICAALDCQPGDILEFVPDPSEASTSETKPAPA
>RPB_1969 transcriptional regulator, ArsR family
MLLEISFDRRTTRPHPAAMKIDDVAAKFEALGNPTRLKIYRALVRAGEAG
TPVGRLQERLKIAPSTLSHHLKTLVAAGLIRQVRDATTLNCHANYDVMRG
LLDFMVAECCADATVPKDTKSAA
>RPB_4149 putative transcriptional regulator
MVSTTPLDVADYLESPEMISAYLDEAFASEDPALIDKALATVRRAPAQLK
TIPAETLKRITELTEGMVFDPDEDIEGGVNL
>RPB_2043 GCN5-related N-acetyltransferase
MTDKPLHTLRPLERADLEKIGWMEAEIAKISFPDDPITDVGFYVKKLEKL
FGDKEAATFVAERDGEIVGWSYVSIRRNFITKQPYGDYHSIYIDPSQRGS
GLSNLLMNSVFDWCKAQKLDHVVFRTRATNEPMKGVLARVGFVPTQIYLE
KPLKD
>RPB_4449 two component transcriptional regulator, LuxR family
MDAKSPNPPHGSRLRIFLADDHPIVLSGMKMLVAEDPELELVGEANDGPK
ALRRAIELRPDVAVFDLSMPGMNGIDVTEKYLEAQPKARVLVLSVHEDGA
YLRRLLKMGVGGYILKRSATDELIRGIHAVAAGGLYLDPAIAGRAIGRGV
QQVSIDSETSPISELSTRELEVLRLASVGHSNKVISAKLQVGSKSVETYK
ARAMDKLGFTNRVELIRFALSMGWLESAEP
>RPB_3030 transcriptional regulator, AraC family
MIGVLIYPDFQLLDAAGPIAAFEIAGRYARNTEPIRTIAATPGAVRSSSG
VEMLARGLRHDRAMRTLIIAGGDGVRAAAGCSRTLAFLRAAAARGCRIAS
VCSGAYLLAEAGLLDGRRATTHWSRTRDFLERYPRVRLEPDRIFVRDGEV
WTSAGISAGIDLALAIIAEQHSDAIARDTARQLVLAQRRAGGQSQFSSLL
ELQAPSGRFAALLGWVREHLGEHLTVERLAEQAGMSARHFTRAFIAETGS
TPAKAVERLRVEAAKSRVQASGEAIEQVARTTGFGDPERMRRAFLRAFGQ
PPQALRRAARAA
>RPB_1974 transcriptional regulator, LysR family
MATINLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREH
FDDPLFVRAGRGVKPTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKR
TFRIVIVDPLEAMLMPTMLREISAHAPQVTIESRPPWNTNVADAIIAGTL
DLACYTFPVSAPGLVFKTICPCDHVIVARRGHPKIGATLDAETFLSLAQV
ALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGVVGSTDLVTVMPR
RFAELMAPKFGLQIFESPIPISPQDYHMIWHEKNTDDPGHKWLRDTMVKA
MQPDPAPAGLVPAAAAC
>RPB_2267 transcriptional regulator, IclR family
MNNPSDALVFAQRTRLGSPTRCLQCPQMPKLKRDESELPDTEHIESLARG
LRLIEVFGAERRPMTLSDVAKACGLPRATARRILLTLQKSGFVTSDERLF
ELTPRVLRLASAYLASNQISTLLQPAMDLVSDKAKEVCSLAIWDGDDAVF
VARSSPARVFSAGIDLGYRLPLFCTSVGRVLLGRLGNDDLAATIDRMTLT
KQTDTTLIDKPTLVATIIADRTKGYSLVDCEAEPAFRSIAVPVRRYDGMI
VAAANIGAHVDRITTGEMIDRFLPPLKRMAEDVRPLVM
>RPB_4279 sigma-24 (FecI-like)
MSVRGWWWPGRRWWSRRAAAGSRAPGVPAEPMRGSPAVARARMVEMLAGP
GAALMDDDSDEALMAAVVARRQQAFRVLMNRHMPRAIRVAQRVVRDPAEA
DDIGQEAFLRVWNKASSFDPQIARFTTWLYRIVLNLAFDRARKPQLAPIE
EAAEIESGEAGPVETIIAAQQRRLLERAMAALPERQRGAVALFHMEGLSG
EDAARAMNLSPKAFESLLARGRAALRKEVERLEGHRRDA
>RPB_3736 GCN5-related N-acetyltransferase
MTTALAWRAEQACLDAWPALRSAHHGDWLLRFGEGVSRRANSVNPLHDRA
ETIADDLADFARIYRHHGLPLIVRVPTLLAGAAQIDRELDANGFGREGET
CTLFRAFGDERFDADPDVTITLSADADWLAAIGRLQAQSPSHAAVYARVV
DAIALPAGFAALRRDGRIVATAYGALSGELLAIESVVVDPALRGQGLARR
MMRTLFGWARGHGANAVCLQVVADNTAGRALYASLGFDTELYRYHYRRAS
AS
>RPB_4391 sigma-24 (FecI-like)
MSSATELLNIFGTEQGHLQRLVRRITGDAHTAEDVVHETFIKLMNRDVGQ
RDVGLVVTTARNLARDAMRAERVRTSYAESVSREQLQPGVVGPEDAVASR
MDLDALLRSLQTLPRRTQRIFLLSRVDGMTYPQIARKLGVSVSTVEKEMI
SALEFCRNWRRRRETL
>RPB_3372 GCN5-related N-acetyltransferase
MNVNPKPALRPYLPEDAEIAASIFVASIEQLTSDDYSEAQQEAWASAADD
DEKFGAKLAAQLTLIATLGGAPVGFASLEGAGHIDMLFVHPDFVGQRVGA
TLIDALEKLAGARGAQALTVDASDNAAEFFAKRGYVATQRNTVTINGEWL
ANTSMKKTLAEPAAPGADQ
>RPB_0358 transcription activator, effector binding
MNRPRLFHASLRGLASAAALMLVTAAASAQTETKPADPAPPPAATTPAPE
AAPAPATPAPAPAPPATETPAPPPPAAEAPAVPPVSKVQSADPFGEEITL
EPKTAVILKGKANWDNAFESLIEAFKSVTALLAKQGIKSNGNPMIVYTST
DDNGFTFQAEIPVPEAPKNLPQTMSMGTTPDGKALKFVHRGSYDNMDNTY
EAITNHLDEKKLEAKDTFVEEYTTDPLTTAEDKLVINVYVPMK
>RPB_4668 sigma-24 (FecI-like)
MQNVIAINDAGRQGIAAAQATTDDMLLANIAAGDRTSMHTLYSRHNVRVY
RFILRMVRDGATAEDLVSQVFLDVWRTARQFEGRAQVSTWLLSIARFKAL
TALRQRQHEDIDQDDVLEIPDGADTPEAALDRSRTSDILRSCIAKLSPAH
REIIHLVYYHEKSVEEVGRLVGIPQSTVKTRMFYARKQLAELLKRHGVET
MAA
>RPB_4389 transcriptional regulator, LysR family
MLRASLQDLEAVAAIARRGSFRAAALDLGVSTTALSNAIGKLEASLGIRL
FNRTTRSVSLTDTGQVFLKQVGPALQDIRAAVETARSRQATPSGSLRINA
FAMAAREILSPLILEFLRRYPDVHVDLVTEGRLVDIVAEGFDLGVRVADL
VPSDMIAVSLGRPQRYAVAGSPRYFAEHGKPQGPSDLVDHRCIRARLPNG
ALLRWQFEKDGRAVQIDVDGPITLDEASLARTAALEGIGIGFFMEQDVVG
DIEAGRLIRVLEDWTPPFAGLCLYYPGRRNPSAAMKAFISLARAWAGNAT
ADRPRRSRPRAPRK
>RPB_2612 Ribonuclease III
MIEDVTSIDSPPMASDPAGSEQPAEQPAGRKRRSKAKSKAVAVAIEQRIG
HSFADPSLLNTALTHVSALKSARNRADSYQRLEFLGDHVLGLVVSDMLYR
AFPNADEGELSKRLADLVRKETCADVARSLDLDEGVKLGTVGAGAGARLR
KSVLGDICEAVIGAVFLDGGYPAAAEFVQRNWTERMRKPTRSLRDPKTVL
QEWAQGKGLPTPVYREVERTGPHHDPQFRVAVSLPGLDPAEGVGGSKRAA
EKVAASVMLAREGVSAGGNDA
>RPB_0135 transcriptional regulator, GntR family
MGKLAQLAYQEAGRNGSLDRSANASANAASLGNSDALFWGALFRGMDRGG
SFLQLQIRQIIVTAIEDGRLPLGMRMPSSRDLAAVLKVSRNTVVIAYEQL
VDQNFLVSRQRSGYFVAGLSKKVASGAGKPAEAASRDDAHWAARYAVQPS
AHRNIVKPADWQAQPYPFIFGQFDPSLFPTNDWRESARAALSVPEINNWA
RDLIDGDDPALIEQLQLQVLPRRGIHARSDEIMMTIGAQHALYLIATLFI
NDRTRVGIEEPGYPDARNIFRMLTPDVVPLASDAQGLLPDERLQSCALAY
VTASHQCPTATVMPLQRRLELLKAAETGDVVLVEDDYEGELMPEAATLPP
LKSLDHASNVLYVGSLSKALAPGLRLGYVVAPAPVIRELRALRRLMLRHP
PLNNQRVAALFIGLGHYRSHLAQVGRVLLERAKMLDRLLPKHLPDCSFSR
GPGSTNYWIACPPGTDTTALAREALAQGVVIEPGAVFSMDETASRHCFRL
GFSSIRTDRIETGIQRLGEVIAEYLKK
>RPB_1386 sigma-24 (FecI-like)
MPLTDSLRDDILAAVPSLRAFAISLSGNGDRADDLVQETLLRALANIDSF
QPGSNLPAWLFTILRNLFRSDYRKRRREVEDADGSYAKTLKSQPGQNAHL
EFEEFRAALEKLPQDQREALILVGASGFSYEDAAAICGCAVGTIKSRVNR
ARSKLSALLYVDGAEDFGPDDTVRAVIGSNG
>RPB_0059 two component transcriptional regulator, Fis family
MNAIPELNDHADRSLLIVEDDKPFLERLSRAMETRGFEVTSCDSVSSGLA
QIGKAAPAFAVVDLRLGDGNGLDVVSALKKERPDARAIVLTGYGNIATAV
TAVKMGAVDYLSKPADADDVVAALLASGTEKSELPNNPMSADRVRWEHIQ
RIYEMCNRNVSETARRLNMHRRTLQRILAKRAPR
>RPB_3909 sigma-24 (FecI-like)
MLTSAELVWLLAAVAKGDQAAFERLYNATRAKLYGVVLRILRRQDLAEEV
IQETYVKIWNSAGTFNPGVASPITWMASIARNRAIDVARKRSEVSIEDEP
AAQEAAADSPDPLARREMTEELKRLLECVGRLEPDRQKLVLLAYYNGWSR
EQLAAKFDAPVNTVKTWLRRSLLDIRECLGLV
>RPB_3555 sigma-24 (FecI-like)
MRGRDDEWTDLMLSANAGDSVAYQRLLKAVTPVLRAGARRGLARAGQPID
QSEDIVQEILLAVHLKRHTWDPEAPFAPWLFAIARNKLIDALRRRGRRVF
VNIDDFAETIPSEAAPETLPSGEIARHLEALPQRQREVLQSIAVDSASIK
DTANRLSMSEGAVRVALHRGLAALAAKMRSV
>RPB_1802 metal dependent phosphohydrolase
MTDLVLVSRAADFAARCHAGQRRKGAAKEPYVNHLAEVAELLAVATDGSD
AALVAAGWLHDTVEDSGTTRDELIEQFGDDVAALVIECTDDKTLPKAERK
RLQIEHAPHLSGRARMVKLADKISNLRSLIFSPPDDWERERLIDYLDWAD
RVVAGCRGVNGYLERIYDETASSGRAVL
>RPB_4307 transcriptional regulator, PadR-like family
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALA
LIAEQPRHGYDIIKVIEEKTAGWYAPSPGVVYPTLTYLEEMGHVVAQPEG
AKKLYVITDDGRDQLAANRVLADAVFERLASFGEMMRQQTGNGGGAEGGD
VPPLLRAALDNLRDVAIRQIAKDADNEAELVAILARAAGELRKV
>RPB_4359 two component transcriptional regulator, winged helix family
MRILVVEDDAMIADGIRAGLTLAGASIDCVANCEDAAAALAANTFSAVVL
DVMLPDGSGLDLLRRLRAGGDATPVLLLTALDEVGDRIAGLDSGADDHLG
KPFDLDELGARLRAIIRRRDGRAATCLEHGAIRLFPAESNATLDGAPVPL
SRREFAVLHALMERPGVIRSRGELEERLYGWGDEVDSNAVEVHIHNLRAK
LGRAAIETVRGVGYRIKPR
>RPB_2128 GCN5-related N-acetyltransferase
MSDLIRRATDDDVAAITDLTMRAYAKWEALIGYAPLPMLADYAVAITQHR
FDLLESDGVLAALIETELRDDDLLIVNVAVSPDAQKRGHGRRLLALAEQL
ARAAGRDTLRLYTNERFDENVRLYASLGYARERLETRANGARVVHMVKGI
G
>RPB_0937 transcriptional regulator, LysR family
MTVARSAQQRRSPRRTAEHVAKTQRKIRYDWNDVVYFLEVARQRSLVRAA
AKLKVDHTTVSRRIRELERSLNSTLFKRSKSGFSLTEIGMRLLQYAEGME
SQANAIVEAIGTDTADAGGAVRIAAMEGIGSFYLTPCIVDFNKIYPSIQI
ELITDTRLLDLSRREADIFVSFFRPHGKRLSIKKVGEFRISLYASNRYFE
GRSEPRTQKELEDHAFIDFIEDHIYSKENRWLSDVLRPPHTIFRSTSLVA
QSIAVSAGQGIAMLPTYVASGRSELRPVMPELFTTRDIWLSVHEDLLHIA
RIKAVITFLEERIEADRTFLNSVKNRPGRRRP
>RPB_0178 transcriptional regulator, LysR family
MALTSARMRAINAVFETGSFAAAARHIGVSQSAVAQSVRELEAEFDVALF
ERHGSSLIPTSLCRQLYGATSKMQAVEADALSILQQRGELAGGELRVGLG
NSMPGMALIAAFKRLYPKVQVAIEIGSWSAIVAAVVEQRVDIGVLPEVPA
DKRFRREICLAQRVVALCHPDHPLQGREQVGIAELTQYPLVFRSRDSSTQ
RTVDRAFRDKGLRPAPSLIVNTREGILEAVANQLGIGFMWEQGSSRTDGI
ARISVPELDAEVPECIFALAGKKGRLVELFFLARGTHGVA
>RPB_1209 anti-sigma factor
MTDPEIPVTEDELHAYVDGELPAERRGDVEAWLATHPADAERVASWRAMA
EALHARYDRVLDEPVPPRLQLARLESPPRRWIAGAIAATLAAFIAGGGAG
WFAHGAAATPNAFRSFTVDALDAHRLYVVEVRHPVEVEGSERAHLQQWLS
KRVGYPVKAPELEGSGLKLIGGRLLPGPDAPAAFLMYESANGERFTLYTS
RADTDTTQMRYASDHRDGAMFWADRGVGYVLSGPIDKERLRQVAQQVYAQ
TDSNGG
>RPB_1819 transcriptional regulator, LuxR family
MPRDRCDPSLAPLLGSALLNIYALSRGTEVGRFQQAALQRVAEDLPFHSA
WWGMAQAQPGGGFALHSSFRYALPEHFVASWEKVALDDDVARTVAARPGA
TGRFSRDDLGRTRGLAQMSERYDIGSILSTVIFDRRLGVATFLSLYRRVT
APGFGEAERDFKELLMPHLTAAWHANWLQHFDGLRSIDEHRGAGLALADR
RGILHIADASFAELMRCEWAGWNGPALPPAVLASAGGEAAYQGRGLRVGS
SREGDLIVFHARPRTPLDLLSTREAEIAACYGLGLSYKEIAARLACSPYT
VRHHLRGIYDKLGVSNKAALARLAGQIAAQPSAGGTSDR
>RPB_3570 transcriptional regulator, MarR family
MTAPKSAVAKPPRAARKEAPAAAAADPGELAMGELSELLGYALKRAQLRV
FEDFLQCVAPVQLTPAQFSVLLLLDNNPGRNQTEIANTLGILRPNFVAML
DALESRGLCQRTRSPNDRRSHILILTDKGRATLARAKKLVATRHEERLSE
LLGDDNRAALLAMLGKIAREF
>RPB_3549 sigma-24 (FecI-like)
MRALHFCARPHRSGVAPSYGDKFAFDCRTFRGFQPTYCARRPVSNKQATA
DEVLIARIAQGDRSAMQVLYGRHQVRVFRFGLRLVRNEQIAEDLISEVFL
DVWRQAGKFEGRSSVSTWLLAITRFKALSALRRRKDAELDDEAAAAIEDP
SDDPEVAVQKKDTSDVLRKCLEGLSSDHREIVDLVYYHEKSVEEVAHIVG
IPENTVKTRLFYARKKLADLLQAAGVQRGWP
>RPB_4591 transcriptional regulator, MarR family
MTRPACTRPPNSRLTIYRAQYKSTVMKSSAPSTARPLRPADKLKLETQLC
FALYSTLLGVNKVYRSLLRAFDLTYPQYLVMLVLWEKDQVNVSEICDQLY
LETTTLTPLLKRLEARGLIRRRRSAEDERQVIVSLTDEGRALRQQVRHVP
DCLGAAMGGSVEEIVELRDKLKKVRSKLFEAA
>RPB_3117 transcriptional regulator, TetR family
MANASTSARTTKVRKSAVSAAPAKASRARVKPVNGAGHGQIATRQRILDV
ATKEFSAKGYDGARVDDIMRIAQVSKNLIYHYFGSKEGLFIAVLEAAYEG
MHAYQTAWPLDVASPIDGVRKLVQSTFKYWHGSPEFIGLLNSENFHKGRH
LRKSKLTKAGYSGLMANIGELLKQGERSGDFRRNVDPVELYISISALAYH
FLSNRYTLAYLLDRKLSTEEDMKVRTAHIEDLILSYLRYGAPNTAGRK
>RPB_1616 putative transcriptional regulator, AsnC family
MVPFFVQFKCELGQSYAVANAIAEAEIASEIYSTAGDYDLLVKFYVDRAT
DIGHFVNEKVQVIPGIKDTHTIITFKAFGPK
>RPB_1745 transcriptional regulator, IclR family
MKRPPKKAATDRSFVVALSRGLEVLRAFGPNDGLLGNQEIAARTKLPKPT
ISRLTYTLTKLGYLTQVPRFEKYQLAPAAMSLGYAALANLGVRHLSQPFR
DELMQQTGGAVAVGARDRISMIYVGQARSSLTVGVQLDVGSRIPIATTAM
GRAYLCALQGDERASLLRDMREHYGSRWPRIKEGIERSEEMVAKHGFAIS
VGEWQDDVHAAGVALTLNDGTGPYAFNCGAPAFRFTEDRLLNDIGPRLVA
MVRKIEAALGGTAAPQSRRPDKSDNKKTKSGGKVARVVEGIR
>RPB_1569 transcriptional regulator, MerR family
MKIGDLARRTGLTAHTLRYYERIGLLPRASRDASGQRDYDASILVWIAFL
GRLKTTGMPIRDMLRYAKLRARGAATEDARRVLLQQHRDKVQAHVAELKA
CLTVLDTKIAGYAAGASKVETDDDATHNRPARKVRARAARARGD
>RPB_2939 Silent information regulator protein Sir2
MIAPDLRSGVERLGDMIAGASVIVPFTGAGISTESGIPDFRSPGGLWTRN
RPIPFEEFVARQDARDEAWRRRFAMDDTFAAAQPGRGHRALAALYKAGKV
PAIITQNIDNLHQASGFAAGDVVELHGNTTYARCIGCGKRHELDWVRQWF
RRAGHAPHCTACDEPVKTATISFGQAMPVDEMRYASQLAQNCDLFLVIGS
SLVVWPAAGIPMLAKESGAKLVIINNEPTEQDEIADLVIRHDIGETLGPF
VGN
>RPB_3417 transcriptional regulator, AraC family
MGTLGNSVDKYVTGRMLQTSNDRRWSHLLAERWSHQAGELPSLLPRDTEI
AVLLRGSSVVDRAGGGMRQRTHGRRGTIWLCPAGIREDFIRVESEMHECL
HIFLPGRPFDDTMLQDMDIDPARIGIRYEAIGQDIFIDYVADQIVRELAE
ESSTGRLLIESLGRALTAHLVHRYADTAVPRKPANAASRPLDAKRLTRVT
DFINASVERDFTVSDLAAVACMSPAHFSRSFKAATGCAPHEYLSRQRLDL
AKRLLASGHRSLADIAYATGFSSQANFNRAFRKALGTTPSAYRAQQRSD
>RPB_1979 transcriptional regulator, TetR family
MVAPATTAQAPHADDDSVKRRQIVKGARAVFLEQGFDGASMGEIARAAGV
SKGTLYVYFADKNSLFCEIMEQESLAQGMLAFDFTPEREVEATLKAFGTA
YIQALCNPRGASAIRTVMAIAERMPEIGQRYYERVIANSLGRFARYLELH
VQSGELEIGNCQLAAAQFTKLCQATLFLPFIFQMTETPSPARIAEVVDSA
TRMFLAAYRAKPDAAD
>RPB_4502 Protein of unknown function DUF179
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSV
IYICAHSSEGAMGIIVNRPAGSIDFPELLVQLDIVEKPEQIKLPDHAESM
KVLRGGPVETGRGFVLHSSDFFIKDATLPIDDGISLTATVDILRAIASGA
GPKHAILALGYAGWAPGQLETEIQDNGWLHCDADADLVFGNDIEEKYDRA
LHKLGIEPGMLSAEAGHA
>RPB_3757 transcriptional regulator, XRE family
MNTTVSSAKAAAGAQPVRIGDYLRQWRQRRHLSQLDLALDAEISARHLSF
VETGRAAPSRDMVMRLAERLDVPLRERNVLLVAAGFAPAFPQRTLDDPAL
HAARAAVDQVLTAHEPNPALAVDRHWNLVSANRMVMPLLDGIAPDLLAPP
LNVLRLSFHPEGLAARTANLGEWCAHLLERLHRQCEATADPKLIALYQEL
KTYPVPARAAPIAPDAVAVPFRLRLGGEVLSFISTTMVFGTPVDVTLSEI
AIETFFAADEATSARLRSMAAGL
>RPB_0197 sigma 32 (RpoH)
MTSAFSSSSLAPAHSDAAVFDEKSYMRAIGRYPVLEPDEEARLWQRWLQH
RDKAAADALITSHLRLAAKLARDFRRYGFPLGDLIAEANLGLMMALDRFD
PERGARFSTCAVWWIRSAIYDHIIRSWSLVRIGRTPAQKKLFFRLRGEIR
RLQPDHHGTLTKELAEQISATLDVPLREVIEMEQRLSGDRSLNTPLSDLD
ESGEWQDLIADDAPNAEAVLAGHDELDHQRRALQDALVQLDARERYIFSA
RHLGERPASFETIGQSLSISAERVRQIEARAFAKVANSARRTCGTARPAA
RVTSNRKTTALTAPPNWIGHNAAAVHASV
>RPB_0781 two component transcriptional regulator, winged helix family
MGARILVVEDEEALTTLLRYNLESDGYDVETVARGDDADTRMKERLPDLV
VLDWMLPGLSGIELCRRLRARTDTKQLPIIMLTARGEESERVRGLATGAD
DYIVKPFSVPELLARVKGLLRRAAPERLATVLTYGDLELDRDKRRVARSG
RPIDLGPTEYRLLEFFLEHPGRVFSREQLLDGVWGRDIYIDERTVDVHIG
RLRKLLNPGREQDPIRTVRGAGYALDDRFAKVE
>RPB_0595 transcriptional regulator, XRE family
MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTN
RVGASRIQQISEVLQVPVSFLFEGGPSGGLANGSGFSEAPSPSYVSDFLA
TSEGLALTRAFTKITDAKLRRSIVDLVEQIAAREPNESH
>RPB_4259 putative sigma factor
MTDLAWIDTAITASRPQAIGALLRYFRDLDTAEEAFQNACLRALKAWPQN
GPPRDPAAWLILVGRNVAIDDLRRGKKQQPLPDDEAISDLDDAESALAER
LDGSHYRDDILRLLFICCHPELPPTQQIALALRIVSGLTVPQIARAFLVS
DAAMEQRITRAKAKVARARVPFETPGAPERSERLGAVAAMIYLVFNEGYS
ASGDTAGIRAPLCEEAIRLARLLLRLFPSEPEIMGLTALMLLQHARAPAR
FDAHGEIVLLDEQDRGLWDTKLIAEGLALIDKAMRHRRTGAYQIQAAIAA
LHARATRPEDTDWAQIDLLYGSLEILQPSPVITLNRAVAVSKVRGAEAAL
AMIAPLEERLSNYFHYFGTRGALLLQLGRRDEARTAFDRAIALARTTAEA
NHIRMHLDRSKRDDAAERINP
>RPB_2285 DNA-directed RNA polymerase, beta subunit
MAQQTFTGRKRVRKFFGHIREVAEMPNLIEVQKASYDQFLMVAEPPGGRD
DEGLQAVFRSVFPISDFSNASMLEFVRYEFEPPKYDVDECRQRGMTYAAP
LKVTLRLIVFDIDEETGARSVKDIKEQDVYMGDIPLMTMNGTFVVNGTER
VIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDI
VFARIDRRRKIPVTSLMFALGLDGEEILSTFYNKILYKRTKEGWRVPFDA
SRFRGYSTVNDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRLSDSE
LVGNYLAEDLVNPKTGEIFAEAGDELTGKPIKGDDKEIELFVGATPMKAI
LEQGYKELPLLDIDHVNVGPYIRNTLSADKNMTREDALFDIYRVMRPGEP
PTLDSAQNMFQSLFFDAERYDLSAVGRVKMNMRLDLDAPDTHRTLRKEDI
LAVIKTLVGLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAI
KERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEIT
HKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSL
ATFARVNKYGFVETPYRKVKEGRVTDEVVYLSAMEEGRYAVAQANISLDA
KGRFTDDLIVCRAGGTRDVVLIPADQVDYMDVSPKQLVSVAAALIPFLEN
DDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGAAIAARRTGV
IDQIDATRIVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVKVG
DKVAKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVK
EDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIG
AEVRAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGV
QGTIVEVRVFNRHGVDKDERALAIEREEIERLAKDRDDEQAILDRNVYGR
LADLLDNRQGVAGPKGFKKDTKITRAVLEEYPKSQWWLFASPNDKLMAEI
EAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQ
PGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQ
ILETHLGWACAGMGKKIGQTIDAYYQRQDLKPLRETLKKIYGDDETIKSL
DDGELIELGRNLSHGVPIATPVFDGAKEADIEEMLKLAGFDASGQSTVYD
GRTGDEFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQ
FGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDT
FEAGIPESFNVLVKEMRSLGLNVDLHNSKLGVPPPAEAAE
>RPB_0754 transcriptional regulator, IclR family
MLADSAGDAAFATTLAKGLIVLEAFDAGTPLLGNMEIAVRTGIPRPTVAR
LTHTLAELGYLRFDPALSKYGVGPRALRMAHPLLADMPFRQLARPLMQDL
AASVRGTVSIGLLDGPSVIYVETARSGDVGPHSPDIGMPIPVVRTAMGRA
AASLLPPDEAELLARRIAAADRSAWERDGELYRAGLAQCAQRGFCTCFGD
YMPSIHAVAAPLFRSSRLKRTFAINCGIPEFRLQPGQLEAEIGPRIRALA
AAIRAMFHEADAAAAPRLRQSRNAR
>RPB_0463 two component transcriptional regulator, winged helix family
MPTIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFRTSPPDLAI
LDIKMPRMDGMETLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIR
KPFSQRLLVERVKAVLRRSAPKDPAAAPKETDAKALDRGLLRMDPERHTC
TWKNEPVTLTVTEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTID
SHIKRLRKKFKVVDDDFEMIETLYGVGYRFKET
>RPB_0179 DEAD/DEAH box helicase
MPFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKT
VAYGLAIAPDLLGEAERFEPAAAPLALIVAPTRELALQVHRELGWLYGAT
GARVVSCVGGMDPRREQRELAEGAHIVVGTPGRLCDHLRRNRLDVSQLKA
VVLDEADEMLDLGFREDMEFILKTTPDSRRTLLFSATLPRGIIALAKTYQ
HNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRYVESPTAIVFC
ATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVAT
DVAARGIDLPNLGLVIHADLPNDPEVMQHRSGRTGRAGKKGISVLLVPPA
RRRRAESLLGLAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQ
ALAQALLAERSAEEIAVALARLYRARLPAPEDILDPGERPARGRDDRAPA
KGARAPREERDYGPRDPGSRARPGKAGQKHAITDGVWFRAAIGKRKNAEA
RWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDFAAQIKRPDKD
DNIRIEPLIGAKPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEP
LADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDGLKTKKSRDDK
PAYVSKARRADPSAPNPGFKKKPKKKFRD
>RPB_4200 transcriptional regulator, XRE family
MAGESGKKLFVGPRFRRIRQQLGLSQTQIAEGLGISPSYINLIERNQRPV
TAQILLRLAETYDLDLRDLATADEDRFFAELNEIFSDPLFRQIDLPKQEL
RDLAELCPGVTHSLQRLYAAYTEARRGETLVAAQMADRDEGTRFEANPIE
RVRDLIEANRNYFPELEQAAEAVRDELNVGSQEVYGALADRLRERHSITT
RIMPVDVMRETLRRFDRHRRQLLISELVDSQGRAFQAAFQTGLTEYGSVI
DGIVNRAGALDEPARRLYRITLGNYFAAALMMPYAAFHAAAEQLSYDVNV
LAQRFNAGFEQVCHRLTTLQRPTARGVPFFLLRVDNAGNVSKRFSSGTFP
FSKFGGTCPLWNVHSTFDTPDRLLKQVIELPDGSRYFSIAQMVRRPVAPH
PQPQPRFAIGLGCEIRHASKLTYAAGMDLEKAEGTPIGVNCRLCERENCS
QRAEPPITRTLILDENTRRASSFAFSNAREL
>RPB_1471 Phasin 2 protein
MADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIE
AVFSSASKGATDYSTKVFDFVKTNTSANFDFAHSLFGAKTLPEIMEMWTS
HAKKQVEVLTSQTKELTELSQKVAAETVEPIKASASKMFTPAG
>RPB_3622 transcriptional regulator, LysR family
MVDFKALETFLWVVTLGSFRGAAQKLNTTQPAISQRIAQLERELGVRLLQ
RDHRMASPTPSGRQLMLYAEKLIGLRTEMLAAIGDQSSMRGVLRLGVAET
IVHTWLPRLIERVNRLYPNLSLEIEVDITPNLRARLLAQEIELAFLLGPM
TASTVRSRVLCDYEIGFLASPSLGLGTGLLNVNDLARFPIITFPRKTQPY
EIVRSLFNKPELPPIRLHASASLGTVIHMAIQGLGVAVIPTAIVEDELAD
RRLQLLQTDLKISPLRFSASWLASPDTIAIERVAELAAEIAHSGGFMPET
SHLAPDILPAEEPVAG
>RPB_3240 transcriptional regulator, MarR family
MTSPRAKSAPALPPALPDVSDMLCFSIYSAEHAFTQLYRPLLDRLKLTYP
QFLVMMTLWRRDGQAVKELGKALFLDSSTLTPLLKRLEAAGLVTRTRNPK
DEREVQLRLTDAGRALQSQAADVMQCVAQAVALDEATVTAIKTAIDAIRD
RLHDQTKS
>RPB_3128 sigma-24 (FecI-like)
MIESAWVTLRRRLVESYDELRILLTRRLGSEDLARETLHETWLRLDRVDD
VSVLRNPDAYLARVALNLATDRQRLETRRARKSDVNAILDDIVEDAPGQA
ERLESRRDLAIFEEAIGELSERRRDILIAARLDQEPHQKIADRLGISKRM
VQIELKYALQYCKSRLERK
>RPB_1511 transcriptional regulator, LysR family
MARHRDGFTDMDWDKLKVFHAAAEAGSFTHAGEQLGLSQSAVSRQVSALE
QELSVSLFHRHARGLILTEQGDLLFRTAHDVFMQLQAARAKLTDSRERPS
GDLKITTTPGLGIHWLVPRLGEFTALYPEIRISLIVTDEELDLSMREADV
AIRTRKPTQPDLIQRKLFSIGFHAYCSPEYIKHFGTPRTLEELDNHRLIM
LSDSQVPPHLQNRSWLVDAGRNGSGPREPYFKVNNILGLVRACQQGLGIA
ALPDYLVEDPNRLVQLFGEEDSIQLDTYFVYPEELKTVARVQVFRDFVVN
KAQRWPS
>RPB_4262 transcriptional regulator, TetR family
MVQKSRAPSRAAAKPKSPAMPDAAPAPKKRGRPRSYEPEQALGQALDLFR
QSGFAATSLDELSAATGLNRPSLYGAFGDKRELYIKSFARYRSDARARIT
EAIAGEAPVRQRLKRLYDATLDIYLSGENGPRGCFTVMTAASEAMADPEI
RAMVQDTLGELDRAFAGLLRQAQQQGELPSSADPQLLGQLAAATVHTLSV
RARAGTPRPALDQIADAAIELICGPA
>RPB_3612 transcriptional regulator, MarR family
MTARSVSRKPNRKASERPEARGPTLDLERYVPAFITFIANKLSNSATAFY
QGHFGVNVTEWRMMSLLAIEPGISAARICEVIGFNKGPVSRTLADMQQRG
LIAIRTDPDDGRTHSISLTAKGRATHDKVIVAALERERRLMSCLNKSEQE
VLIDLLRRLHDNLDAVTGDKV
>RPB_3426 transcriptional regulator, GntR family
MTARARIRPIDVVAEPDLAMPPLSPEVSYKAKAYQALKQAILRMDIYTAP
EPVMLDERALSDKLGVSRTPIREAIAMLEQDGLVKAVPRRGIMVVRRTKA
EIVDMIRAWAALESMAARLITTMARKRDITALRDVFQAFGPDHLPQDHIE
EYSRANIVFHQALISLSESQVLVDMTDDILIHVRGYRQLTIGRKERIAAS
LPEHLAMIEAMEARDTELAEKLARDHTLRLAAYVEAHGQELFA
>RPB_0727 transcriptional regulator, LysR family
MIDKLELLLALAKERHFGRAAEACGVTQPTMSTSIKQLEEILGVMLVQRG
SRFLGFTPEGERTLDWARRIVGDTRAMRQDIGAMKGELSGELRIAAIPTV
LGMVASLTTPFRARYPNVRFSVLSCTSSEVLGLLENLEADAGLTYIENEP
LGKVHSIPLYQESYRLITSPDGMFGDRDQVTWKEVGQVPLCLLTPNMQNR
RIIDRALREAGTEAHPTLTSNSIIVLYTHVKTGRWASVMPAKLAETLGLG
DGVRTIPIVDPMVSYSIGLVVPQREPYTPQVAALMQTARDIAPTLQS
>RPB_2809 SOS-response transcriptional repressor, LexA
MLTRKQFELLKFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEE
RGFIRRLPNRARAIEVIKLPDLGGNSGARRGFTPSVIEGNLGKVRPPSPQ
HAEDDSDRNVAVPVMGRIAAGTPIEALQTRSHTISVPPDMLGSGEHYALE
VRGDSMMDAGILDGDMALIQRNESADTGDIVVALIDEEEATLKRFRRRGA
SIALEPANSAYEVRILPPNRVRIQGKLIGLYRKY
>RPB_2607 DNA-directed RNA polymerase, omega subunit
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSQLTIDRDNDKNPVVSL
REIAEQTVSPEDLKEELVHSLQKFVEVDEPEQDTVPLIGSAGASVDADDT
EVALERMTEEELLKGLEGLAPPEEQPEEDE
>RPB_2046 transcriptional regulator, AraC family
MNQRNHYSTAALTGSESIAAWRQAMAEVYYRLDIQARHDDRVVGELIDVQ
LGSLGLSNFKADAQRVIRRKESAKIDGSEDFVFLFPIRKGLQYEQRGRSG
LAMPGTVFLLNSAENYVIDVPDGSENITIKVDRRLLIDRVKGIDGLCASM
NIANSQLVPVVTTLGAQLLNLPPGEHADRLQQSVIDLICLMLDLRESAQD
KTFIRQTLASSLYHRIDAYLQRNLHDCDLSPDHAAREHKISVRYLHKVFH
FHGTSFGQRLLELRLQRAHYVISRHGATTTINLGQVAYECGFTSQSYFST
CYRKRFGLTPRQTGKSDRQSAADAGS
>RPB_2639 NusB antitermination factor
MADSKKPAIKKPVPKGDRKANRRGAARLAAVQALYQMDIGGAGINETFAE
FESHWIGNEVEGDQYLPAEAAFFRDVVSGVVRDQKKLDPLIDDALAKGWP
LARIDAILRAVMRAGAYELEHRKDIPARVVVSEYVDVAHAFVEKDETGMV
NAVLDQIARQFREDEFTRG
>RPB_1384 urease accessory protein UreG
MTAHHGPLRVGIGGPVGSGKTALMDLLCKSMRERYDIAAITNDIYTKWDA
EFLVRSGSLTADRIAGVETGGCPHTAIREDASMNLAAVAEMRSKFPDLDL
VLIESGGDNLAATFSPELADLTIYVIDVSAGDKIPSKGGPGITRSDLLVI
NKIDLAPHVGASLEKMDVDARRMRGERPFVMTNLKKQEGLDRILAFIEAK
GGLVSKASEA
>RPB_0688 transcriptional regulator, XRE family
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDI
ETGAAAARATTLINIARALGLEMMLIPQAMVPAIQSMLQPAADDDDRPAF
TSDAEEEERP
>RPB_3912 two component transcriptional regulator, winged helix family
MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDYDIILL
DLNLPDMSGYDVLKQLRVSKIKTPILILSGLAGIEDKVKGLGVGADDYMT
KPFHKDELVARIHAIVRRSKGHAQSVIQTGDLVVNLDTKTVEVGGQRVHL
TGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKK
LANASDGRNFIETVWGRGYVLREPTEDDVRIPA
>RPB_1250 two component transcriptional regulator, LuxR family
MTNDLKKRDIVLVVDDSPETLRMLTDALDGAGMTVMVALDGAAAMRIVEQ
ITPDIVLLDAIMPGLDGFETCRRLKRNPAVSDVPVIFMTGLAESEHIVRG
LEAGGVDYVTKPIVIVEMLARIRVHLGNARLSQSARAALDVSGRFLLAVD
RVGKVLWATPQAQKLLAADGASAEGFRLDLPKPWLDWLEQVHSGLAQPKT
PMKASLLRNDELRLQYMGKLGPNEFLLRLARDTSGESPKEFTTEFGLTSR
ESEVLAWLSKGKTNRDIAQILGLSPRTVDKHLEQIYAKLGVENRTAAAAI
ATSASRRDS
>RPB_4602 transcriptional regulator, LysR family
MNTNITLRQLGFLVAVADTLNFSRAAEQCFVTQPTLSAGLKELEDRLGVV
LAERTKRSVLLTPVGAVIAARARAVLLAAREIETLAATQAAPDTGDLRLG
AIPTIGPYLIPRALPEIRRAFPGLRLLMREEMTEPLLDGLHHGRLDLILF
ALPFETSGIEIMELFEDGYHLAAPPGSFGPEPVRVSQLDGARLMLLERGH
CLQRHALSAFPDHDIQQDESFSATSLSTLISMVSEGLGITLLPDLALDAG
VLGGQNVAIAPLPDACPRKVVLAWRTTSARAELFRSLGDIFRRTRGLVRP
PR
>RPB_0193 transcriptional regulator, AraC family
MTTSGANNVRVADSCRSWRTALAEPKRVSAVDRASEEVGRPPRSAIRSWG
QRKIEAGYWSIDWPGVIQREMSLSTRAFCELSMVLTPVDDMTLLRGETTI
RTGPLQSGRFRVAPANAALSASVSASGPVKFLKVFFAEETARAIGSAIHS
HSIDIELEDPMLGTNDPLLVALGREVVENMNDPRPTNRAFAEEAAILMAG
RVVSHYSTARYCTSIAVRSPGLDPNLDRALQLMRDHIGDSIDLGMLAASV
DMSAFSFVRAFKKKYGLPPIRYHRGMRIEWAKTLLSTTACPVGKISNMLG
FSEPSHFVSAFRKTTGCTPLAYRRFRS
>RPB_0501 transcriptional regulator, MarR family
MKKHIKDPIAGAAGPERDLTRRFASITTNVAVFLDEIRHYRAKNLGISGP
QFAILMAVMDLDEGEGVSVRHVAKAMHVDSSFITTQSKLLEKKALVRRRP
DPTDARVVKLSLSDKAYKSIASFAAEEQSLNDFIFEGLSNESLEDLVQQL
TALKLRLEKACLKIAGGF
>RPB_3273 transcriptional regulator, TetR family
MTQKGGRPRKADGEAKSIHIIETASRLFAQQGYAATSVEQVVAACGVGKD
TVYRRFPSKLALFEGVVEHARIQTQAHFHSTMAAAEKGDVLTQLRAAARW
LLAVNLDPTLIAFKRIAFSEALVVGQSVAGNKHDPIMDRLFALIKEAQRT
GDLAPGDVSFLAMHLLNCVAVGPMIDAMLGRTTYASTRAQNAYFETAWKL
FLNGARRGAS
>RPB_3669 transcriptional regulator, TetR family
MKDAPRRPTKRSATSVTPGPAPAARGRAKPADATSDPSRNAAASTRALRA
AERRAAIVDAALDEFIARGFAATRLEDVAKSAGVAKGTIYLHFADKEALF
QELLRAAMLPLIEKLDAPPLPGVSARAMFEMFAEVFVREVTQTKRADLLR
LMITEGPRFPSLAEFHYREVVVRGLAAMRRVIAYGIERGEIRNDTLLQFP
QLIMAPAMLTVIWQGLFNRYSPLDSLGLLRSHIAIIFNEGKAT
>RPB_0714 transcriptional regulator, AraC family
MTELLSEPLSRFRAMDTSDPDELAHALSTVYGARNFQCGSAGTFRVRGNF
VQLQDIALGFTCGRAPLSVDFPEADFARLQIALTGQSSTRSAGVTTAIDP
RQACVSSPGRTAHTEFGPFYEHLLLRVQSSAIDRKLTALLGTKPKRAIEF
EPAASNDLLQAANLRRLIGFVNSQINSASAPLPELVMAELQEAITLLFLT
AYPHNFTKFLEADSRSAAPGHVRRIEEYIEANWAEPITIETLTDLTGISA
RGIFKAFQRSRGYSPMAFAKQVRLRQARTMLQQGRALTSVTAAAFACGFS
NLGHFAKDYRTAFGERPSETLVRSSR
>RPB_2984 transcriptional regulator, AraC family
MPPPSDAHSTCQTPPTELLKDFAILRTNDPDTARKLVWSRFGLNLSTPRI
EGFFSRANIAELPNVSLYFCANSTPVALQIPNSKGAHVHLCLRGRGTLIH
DRRRIEIGEGEAFVCSPGKPALLDFAAGYEELALHVPVPMLERTFAALTG
LGPHTTIAFEPEIITDDPHYAGFRDLVLLLAGSLDAAFSAWPKATIAQLE
LACVSQLLYCTSHNLRRVLCPEDFGAVPSLVRIAEHYIESRCESDASVDD
IARACAVSVSTLTRMFMKYRGYSPAAFIKRAKLARARQLLESRAASTVVG
VALRCGFANPSRFAKDYREAFGESPTETLRRRRPQD
>RPB_2619 putative transcriptional regulator
MSRSPARNLHPLPPAPEPASDAAVLTERFSAWQAQGLDASRCPVRNVLDH
LGSKWSTLLLIALAEKPVRFNALLRTVPDISRRMLTQTLRHLERDGLVAR
QVFPTKPPSVEYRLSAAGRSVLTPLTALVGWAESHFAEIEQARARFDAAE
ATAPVSSGETAYPL
>RPB_2374 two component transcriptional regulator, winged helix family
MADQPQLPHILVVDDHREIREAVTKYLERNGMRASAASNTVEMDAQLKAG
RFDLIILDVMMPGEDGLSAARRLSTGGGPPVLMLSALSDETDRVVGLEIG
ADDYLAKPFSPRELLARIKAILRRSERREPLAGTLGGRKLGFAGWLLDTD
TRDLVRDADRAEKIALTTAEFKLLVAFLERPRFVLTREQLLDITSGRSAD
VFDRTIDNQVSRLRRKIEDDPAHPKIITTVRSGGYSLAADVRELP
>RPB_0210 transcriptional regulator, AraC family
MSSHSLQIAGERVCARHAAGVSSASSMGRCQQPDEVWSGHLRNRERSNFD
LKKMAALIRALTAEGGATPGIVSGLRPPAASGGETVLNFRDRSEGRPGPG
DPPCTDDDPLVIRLSEALAAAECDSSEFADLYADAIRVVTAVRKLSMQPP
AALIEDRKPTGGAVLPKWRLKLVANYVSEHLAEKVTLADMAAAARLSRMH
FAALFLRATGLRPHEYLLKRRIAAAQELLQTGDLPIVQVAMQVGFQTQAH
FTTVFKRITGHTPAKWRQTMRPHD
>RPB_4035 two component transcriptional regulator, LuxR family
MEAHPMDQQAPSRLRVFLADDHPVVLSGMKALVAGDPALEVVGEASDGPN
ALRRATELRPDVAVLDLSMPGLNGIEVARKFLAACPECRVLVLTVHEDGA
YLRQLLDLGVSGYVLKRSATEELIRGIHAVGTGGIYLDPAIAGRAIGRSA
PHVHNSEEHSAVSELSTREIEVLRLAAVGHSNKTIAAKLQIGAKSVETYK
ARGMAKLGFHNRVEVVRFALSMGWLADP
>RPB_0236 two component transcriptional regulator, Fis family
MIEERSLIVVEDDAGFARTLKRSFERRGYEVVHASTIDEVRDALDERSFG
YAVVDLKLGGASGLACVELLHAQDPEMLIVVLTGFASIATAVEAIKLGAC
HYLAKPSNTDDIEAAFRKAEGNADIALASQPTSIKTLEWERIHQTLIESE
FNISEAARRLGMHRRTLARKLEKRQVR
>RPB_0418 transcriptional regulator, LuxR family
MLAGESHLWGRRALEFVDAADRLDAPSLVRQFESHIASAGFSAYIMAALP
APGAGLAELTLANGWPRGWFELYVGRNYMAVDPVPRHGAATVQPFEWSDA
PYDRKRDRAAHQVMTDAAEFGLVRGYCIPLHYDDGGAMISMAGEAPDLDP
TAKGAMQLIGVYAHNRLRSLNRPKPQRRLLTSRECEILSWAAQGKTAWEI
SMILRIAERTVKFHLIEASRKLNAVNRTAAVAKALSLGLIRL
>RPB_3893 transcriptional regulator, MarR family
MQTRSDVMKKRIRADDSRFLSNRSPFFHNVRMLARYSARMNAILKPAGLD
VPKWRVLMLLVEGRPLTVSQIADEAVVNISTMAKIINRMTDDGLVTTRTS
STDARSTDVFITEQGERVLELVREKVSYLFKEALRGLTKAEVQLLNTLSV
KIYDNLSP
>RPB_0097 transcriptional regulator, TetR family
MNEQAKTSDDPRRAAILQAAFDVFVEKGFEAATTAEIVRRAKTSKRTLYE
FFASKQDILSALVRYGSQKMQPSLDLPAPQDRAQFLVVLEQFGQRFLGEL
LHPERTAMYRLAIAEAGRGGGMVARELDANGRQPVMRAATRFFDQAAARG
IIRGDDIATLLSVYFSVLIGFAQLQTLLGAEPPFDAEAIAQRAALATRAT
ERMMRPA
>RPB_1500 transcriptional regulator, LysR family
MPKYITNELVASLISRIELMAEPTLKQIRMFLAVARHRSFRVAGDRVSAS
QSSISIQIKQLEDRVGLALFDRTTRVVKLTPAGSELLADFERLAAMADEV
RVKCAQLAAGRTGQLRIGVLPSIAEHLLPEVIAEFSRELPGVHFEIFEAV
EQELIAAVKVGRCDLGLTSARMLERGMTFEGLFSDDLFAVMLSSHPLASL
DEIPIAALAERPLILTKWGTSLRLAASQAFEDEGIAIVPAYEVTNMATAL
GFAAKGLGVALLPASAVRNMQNVATVARPLRGQAGSRMMGILQLEGAVSY
PLQQRFIALLRSVVATAASRQVLAPES
>RPB_0449 transcriptional regulator, AsnC family
MSLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVA
GYRALIDRAAVGLSVTAFAGIRVERHSRDNAEAFIAAVRDMPEVIACHLV
SGDADFLLEVVVPDIAAYEATVLRGLLALPTVRDIRTSFAMRSDKLDGPL
PLPKPA
>RPB_1078 transcriptional regulator, MarR family with Acetyltransferase activity
MSSPVPPDQVDTVRGFNRFYTRRLGVLEQHLLNTPFSLTEARVLYELAYR
EAPLAKEIGAELGIDAGYLSRILQSFDDQGLISRKPSPDDRRQSRIGLTA
KGRTTYGRLEQRSQQEIAAMLAGLQPSERSRLVASMTTIERLLRAAPSQG
PVLRGPQPGDIGWVVQSHGAFYAAEYGFDTSFEALVAEIAGRFLASHDPR
RERCWIAELDGAQAGSLFLVQASDEVAKLRLLLVTPQARGHRLGQRMVQE
AICFARQCGYRKVTLWTQSILVAARKIYQDAGFILVATEPHRSFGTDLIG
ETWELTL
>RPB_4667 two component transcriptional regulator, winged helix family
MSHSPHIIVVDDEAPAREMVGDYLRMHGFAVTLCDGGKSLRAEIETKVPD
LVVLDLNMPEEDGLSIIRDLKAKTNVPVIMLTATASPIDRVVGLELGADD
YVAKPCELRELMARIRSVLRRSAPRPTAAPASAAAPTKAAPEQLVRFGTK
WLDLEAQALRDDDGNEHPLTASEFGLLKVFAANPKRVLSRERLLELANAR
DAEAFDRAVDLRIMRIRRKIEPDPTKPAVIRTIRGGGYLFSPAAERP
>RPB_1493 transcriptional regulator, GntR family
MQSDEDRLMWKELLGRSAKEGVQLQAQLRNAFVDAIVDGNLPAGRRVPSS
RELAALAGVSRTTASLVLEKLAADSFLEARPRDGFYVSSALKRRQVTFGR
AVGNADQPDWAARLVHAEVGYPWQERPRGWESCKYRFVYGEVNAQTFPFT
DWRDASRSALTSPAIQHWGQDSGGEDSRPLIEQIINKILPRRGIAAAADQ
VMLTLGTQHGLYLIAQTLLGPGLKVGVEEPGYMDARFIFLRSGADLLSIP
IDAFGMTIDKRSLDCNYLYCTPSHQAPTGVTMSTERRLSLLNQAIVQDQI
IIEDDYEPELKYDGAAAAALKAMDRSGRVIYLSSLSKLVCPGLRIGYLVG
PETLIAELKSLRRLMLRQLPGNNLASAAQFIRQGHYDRLMTEMRRSLETK
AKLIVDTLRRELPIAEYEAPTGGSAIWMRIPGCRSPSKLRAACFDAGVLI
DPVEPYFALAPKETWVRLNFASMPRQLVEAGTVAFARTVSKLIRSGG
>RPB_4218 transcriptional regulator, DeoR family
MTCGANARTMEQIASGVRVTALSHRQSEILNLARASGRVMVDDLARRFDV
SAQTIRKDLNDLCDQRSLTRIHGGAIIASGVENLAYEARRFVAAEEKRAI
GVAAASQIPDGCSLFINIGTTTEEVASALTSHQDLLVITNNLNVAMLLYK
YPRIEVIVAGGTVRRSDGAVIGSAAIGLIGQFKVDYAIIGASAIDEEGAL
LDFDYREVQASQAIIANARSVMLVADSTKLRRSAPVRIAHLSQIQTFVTD
EALPPALQSICDTRGIEVIAALPKRADDLDESAA
>RPB_0245 conserved hypothetical protein
MAEDTLTTTNAGIAAHGAERLPSVDVDTYNIELKDDDGFLGDRASKGAFQ
RMLDASRKPLRKTGDDPLGKKPTEEISKGALDEILNGDDVHAAALVHGAI
EEFAQELAYVTGRFLKTKAWADTECIVVGGGFRQGRVGELAIARTDILLK
SEGLKVDLVPIRFDPDEAGLIGCLHLAPSWIFEGHDSILAVDIGGSNIRC
GVVETGWKKARDLSKASVWKVDLWRHAEDEPTREGAVKRLTKMLQGLIAD
AEKEGFKLAPFIGISCPGVINSDGTIEKGAQNLPGNWESSRFHLPRSLLE
GIPTIGDHDTAILMHNDGVAQGLSEVPFMQDFERWGVLTIGTGLGNARFT
NRKTKEKGKKAKEKDKDDKPSDKQKDKERKEKA
>RPB_2418 exoribonuclease R
MSKTRDDKFPDKATLLAFIRAHPGKVGTREIAREFGLKNADRAELKRRLK
ELSDDGAIRKSGRRKVAEPATLPPTLLADITARDSDGELIATPSEWDEQD
GEPPKIRIHTPRRPKPGTAAGLGDRALLHVEPAEAPEQGPAYVGRVIRVL
DRGKPRILGIFRATPQGGGRLVPVDKKQAGRELNIAPHDAGGAQDGDLVS
VDLIRSRGYGLSSGRVKERLGSLATEKAVSLIAIHSHDIPQEFSTTALRE
SEAAEPATLKGREDWRELPLVTIDPPDAKDHDDAVHAEPDPDPNNKGGVI
LHVAIADVAYYVRPDSALDRDALRRGNSVYFPDRVVPMLPERISNDLCSL
KPGEPRGALAVRMVIGADGRKRSHSFHRVLMRSAAKLNYAQAQAAIDGRP
DDTTGPLLDTILKPLYDAYAIVKRGRDERDPLDLDLPERKIILKPDGTVD
RVIVPERLDAHKLIEEFMILANVAAAEMLEKKALPLIYRVHDEPSVEKVH
NLVDFLKTLDLSFAKGGALKPAQFNRILAMVKGEDAEPLVNEVVLRSQAQ
AEYASENYGHFGLNLRRYAHFTSPIRRYADLVVHRALIRALNLGDGALPQ
TETVETLAEVAAQISLTERRAMKAERETVDRLIAHHLADRIGATFQGRVS
GVTKAGLFVKLSDTGADGLIPIRTLGDEYYNYDETRHALIGSRSGAMHRL
GDVVDVRLVEAAPVAGALRFELLSESRSVARGPRKGAYKGRAKAVEPAKG
GAKIGRSARSKAGKPKAAKPSKRKANKPGKGTR
>RPB_0548 helicase
MPHSFSAPFTNAPFTNDRAPGAGVTAVLGPTNTGKTHLAIERMVAHPSGL
IGLPLRLLAREVYNKIVDRVGPDAVALVTGEEKIKPPKARFWVSTVEAMP
RDLDVSFLAVDEVQIAADLERGHVFTDRLLRRRGRDETLLLGAATMRPII
ERLLPGASIVTRPRLSQLEFAGDRKLTRQPRRTAIVAFSADEVYAIAELI
KRQHGGAAVVLGSLSPRTRNAQVAMFQSGDVDYLVATDAIGMGLNLDVDH
VAFASDRKFDGYQFRRLNPSEFAQIAGRAGRATRDGTFGTTGRCAPFEPE
LVNALQNHTFDTVKTLQWRNSTLDFASVAGLQVSLAETPRHDALTRAPVA
EDVRVLDHAARDAEVREMAHGAAAVERLWDVCQVPDYRKIAPAAHAELVT
TLYRFLMRKGRIPDEWFAAQVEQANRIDGGIDTLSARIAQIRTWTFVANR
ADWLADPEHWQGISRDIENKLSDALHERLTERFVDRRTSVLMRRLRENTM
LNTEIGKTGEVIVEGHVIGRLDGFTFAPDAAEAGSDAKALQATAQKALAG
EIESRAEKLSNAPDEQFVLTSDGTVRWTGDAVARLVGSDDVLRPRLRIIA
DDRLAGAPREAVQTRLDLWLKTHIEKILGPLFELGKAEDITGIGRGIAFQ
LIEALGVIERAKIATEMKDLDQPSRATLRKYGVRFGAYHIYVPSLLKPAA
RALASLLWAQKLDNVDMSALSGAQHLASSGRTSFPADKALDRDAYRVLGY
RLCGERAVRVDILERLADLIRPALAWREGTSGEKPAGAFDGRSFVVTQAM
TSLTGSAGEDFASILRALGYRMEKRPAPPPQPKVAETAPAAAAADAPAAA
SDTGLSAEDHAILAGAIAFEPAVTVEADIDTDTDQPAATEAAAEPVAEAA
AEATPELAAPAEPATDSPVETAAAAPTTEASATDAPAAEAVASEETASDE
TAPVADVAASDAPAPEAAPTETTVDATSAPTSEVAAPAQPDMVEVWRPGG
RSDEHRARPDRNRQRHRPQQGGQAAAPAEGEAAGEAKRDRPGGGRRGDRK
GGGDFRRDRPREGDGAPPQATAGEGRPPRERFKGRDNKFGDKFKGGGKGG
RDQGASHRQVASSAPPRERDRPIDPNSPFAKLAALKEQLTAGRKE
>RPB_2237 transcriptional regulator, TetR family
MATTANSEQCPLSTTDKTPPPQSAAPRGRPKLQSDEEQRARIADCAMRLF
LKKGYGRTTTEDIAAHCRISKQTLYRLFPGKPALFATIVDRHRHSMLALP
GDYDALPLDLALERIFNIDIEPAAHDERMALVRLVMVEAHQYPELNEILR
RHGAERSHAELAGWLKRRSKQEAIDIGDAMHSAWLLMDMMFGALAFKPFN
ESSQSRTVDLARHIRRFISVFLNGIRPR
>RPB_2276 NusG antitermination factor
MSMRWYIVHAYSNFEKKVSESIREQAKQRGLEDLFEQVLVPTEKVTEVRR
GRKVDAERKFFPGYVLVKMNLTDEAFHLIKNTPKVTGFLGAENKPMPISE
AEAMRILHQVQEGVERPKASVSFEIGENVRVADGPFASFSGVVEEIDEAR
SRVKVAVSIFGRATPVELEFGQVEKV
>RPB_2839 transcriptional regulator, LysR family
MLAPLDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLQDATGAP
LFTKVGRKLVLTNHGELVLGYARTIMGLQDELRSRLAAPKLDGMVVLGMP
DLYAAYLLPGILADFRSAYPNVNVELKCALSSKLMASVERAEIDLAIVTG
MPAFKVGELVAQEELVWVTSERGSVHLENPVPLAMLPPGNIFRDFGLAAL
ESIGRTWRLRCISESIGGIQAAVFAGIAVSVVGKSSVLPGMRTLGRGDTF
PALPKVDLVMYRSARRANPAAEALAGVIVRHFANSALAPSARFVRTQAGS
GSHD
>RPB_4514 transcriptional regulator, TetR family
MSEKPPPKGTPRRVRADAQRNLKTLLDAALTVFATSGVEAPVREIAEKAG
VGIGTLYRHFPQRSDLIVAVFRNGVDACAGAAAELAASHAPFEALSLWMQ
RYVDFVATKRGLAAALYSGDPAYDSLPAYFEQKLRPALQALLDAAGAAGE
IRRDIEPFDLLKAVAQLCTSAPGGDPAHTRRMVGLLIDGLRYRAGSAAEP
GR
>RPB_1808 sigma-24 (FecI-like)
MPKPPEPTISDDAAASFATLRARLVRVAYRMLGSVAEAEDVVQDAYLRWH
RTDRAEVRDPAGFLTRTVTRLCLDVLKSARLRRETYIGPWLPEPLIADPC
EDEGDDITLTLMLALERLSPLERAAFLLHDVFGLGFDEIARTLDRDAAAC
RQLAARARGHVRAERPRFPVSEERGQAIAGAFFEASRSGDLKALTALLAD
DVVFYGDGGGKRPATLNPIFGLAKVARLFEGLARKHAPGASVVVSTGRID
GLPGFVTTEPDGLIQTTALAIEHDRIVAIYVVRNPDKLRHLLALSAVPAR
P
>RPB_2850 transcription-repair coupling factor
MKAPSRSPAELLAPGKALTFANVAEGAEGLIVSDLARAIAARPKPPAVSL
AVICRDGPRMQQLERSLEFFAPDVGVMQFPAWDCQPYDRVSPHAGILAQR
VTTLARLSRLAGSDKPLIVLTTVNAAVQRVPAREVIAAQALSVAPGNIVP
MDSIAAWLEHNGYSRASTVREPGEYAVRGGILDLFPAGLEQPVRFDFFGD
QLESIRTFDAETQRTLHTMRGLDLVPVSEFQLVTETIRRFRMGYVAAFGA
PDRDDQLYTSISEGRRHPGMEHWLPLFQERMDALFDYLPGTPVAIEPQSE
DAARERFKQIADYYDARREAMEHPGSGAIYKPLPPDQLYLTEAEWTARLQ
GISLARLTPFDVPDDGSSVIDAGARAGRNFAPERADTSVNVFQALVAHVQ
ALQAARKKVVIALWSEGSRDRMASMLKDHKLVHLTSVNSWRTVQATPRNE
AMLAVVGLESGFETDAFAVITEQDVLGDRLVRQRKSAKKLDNFISEVTSL
SSGDIVVHVEHGIGRFIGLQTLEVGGAPHDCVELHYANDTKLFLPVENIE
LLSRYGSDGTSVELDRLGGGGWQARKAKLKNRIRQIAGELIKVAAERHLR
EAPKLHVEPHLYDEFCARFPYEETEDQLAAINAALGDLERGMPMDRLVCG
DVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPV
NVGQASRLVSPKELTQVKKGLAEGQIDIVVGTHALLGKGIKFKDLGLVVV
DEEQHFGVTHKEKLKQLRSEVHVLTLSATPIPRTLQLAMTGVRDLSIIAS
PPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDF
LDKHVPEMKVAVAHGQMPPTVIEDIMSAFYDAKYDILLSTTIVESGLDIP
NANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPQHNITAQAERR
LKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQML
EEAITNLKAGVSEPVADRWSPQITVGMPVLIPEDFVKDLSVRLSLYRRLA
DLDSDEEIENFAAELRDRFGVLPDEVRYLFKVAAIKAYCRHANVEKVDAG
PKGVVITFRDNAFAHPDRLVTFIRRHGDAAKVRPDMKVVFFQVWKTPEER
LVGTTEIMRQLAELAEAKKAA
>RPB_3660 transcriptional regulator, AraC family
MRARSALQRVVYSAHDLSPGLDDQARFSRWRDIYTASFLQSGNVVRLSDR
PFAATWEHAQIGDSLVARFEGTLQRVSRDAQQVAAHPVDRFCISYNRASS
RQAMVQRGRELTLEPGTPAFFNLSEMLDCRSEHGEARIGFTLPRKTLLDS
IPHAEDLVLRPLDPGDDALLHLRWYLDFLLERDGAALDPAMVAHVQSVLI
DLLGLALGVGRDLAEASKLRGLRAVRFMTIVAEIGAGFADPGFSAARLAA
KLNLSSRYIQDILHESGVTLTERVLELRLQKARRLLASGLSPALKVTDIA
LSCGFSDVSHFNHSFRRRFGASPTQFRPPRIN
>RPB_2217 sigma-24 (FecI-like)
MFDRNSKSLREALAADYQGLAKRLTRCLGSADVAHETLHETFLKVDRVSD
AVEIRSPVDYLFRIALNVAKDRNKKDRHLLSAGEVAAIMDVVDDRPDPAI
VAESRMEIAEFQKALGELPQRRREVFIAAHLEQIPHRDIAQRFGINIRTV
EFDIQHAMEYLSRRLGRRVVRRYGPRPKPRAVD
>RPB_3651 transcriptional regulator, TetR family
MNSLRMTRDLRRELILGAAKRCFARNGFAGTTTRSVATAASISEGLLFKH
FPSKSALYAEILAEECEADPALVHLLDLPPSTEALVVVVRNMVVHFLHVS
DQPDGEEAQRLRLLVTSQLDDGEFARLVFEKISGLIGPKFAASLDRAVAA
GEATRIGQEPMNLFWFAYHTLVTMALGRLPAVPCLAYGEAAALERQTCEY
ILRGIGLNDDVIAAHLDRELSPEQTSAETTESA
>RPB_0551 transcriptional regulator, CarD family
MCYIWHITNSARGFAAGKGSRQKQRTGAWRFHAQAVSQKTRKMSVSSKGA
KRGAAAGRSATNRSSMSAKDTRTVKSPASKAVAAKTTAPKATASKTAASK
ATVSKTKASVSQASVSKASSSKAAAAKASAAKATAKTTTAKGSAARASAP
KAAALKSSKNKRSAMPSKTAKTAAAAPASKAAPAKSTAKPAAAKAPVAPP
RAAPPKAAAKPEVKPVAVKPAAPPKVEEPKKVVTQRQGFKASEFVVYPAH
GVGQILAIEEQEIAGAKLELFVINFIKDKMTLRVPTAKVANVGMRKLSDP
ALVKKALETLKGRARVKRTMWSRRAQEYEAKINSGDIVAIAEVVRDLFRS
DSQPEQSYSERQLYEAALDRLSREIAVVQQVTETEAVKEVEGQLAKSPRR
GAKAEADAEGDAEGDLDGDTDDAVTDEAA
>RPB_0799 transcriptional regulator, AraC family
MTASTVLHRGTITVSDFRCSAGPDDVPFAECHVAHSISYVRRGSFGCTTR
GRTYELVAGAVMIGRPGDDYVCSHEHHACGDECLSFALTPELAATLGDDD
TLWRSGAVPPRAELMVLGEQAQAAAEGRNDLGLDEIGQVLAQRFATIGGG
RAYQPPPLRARDRRRVVETALWIEAQCTEAIDLEAAAARAGLSPFHFLRL
FSAVLGVTPHQYLVRSRLRRAARLLAADDGPITDIAYEVGFADLSNFIRS
FRRAAGLSPRAFRKASRQDRNFVQERLGAV
>RPB_2626 transcriptional regulator, MarR family
MIKAVATAAEAAAPAVAGQAPVQPLYLEALTLVERLHRRLLDVIKDEFDR
RGRADINSVQALLLYNIGDKELTAGELRTRGYYLGSNVSYNLKKLVELGF
LDHQRSRVDRRSVRIRLTAQGQEVRHIVDALYQKHVKTVEQVGGISSEEF
ATLNKSLHRLERFWTDQILYRL
>RPB_0905 hypothetical protein
MSSRRRRHDNDATHQADDRERRAKALEFVIPGRAQREPGIPKFGARAAVA
EHVWIPGSLAARAPRNDDLRDFVERVSIWRINQTNTDQH
>RPB_4264 transcriptional regulator, TetR family
MTDRAALLPLLGEVFRAHGYEGASLALISQATGLGKGSLYHFFPGGKTQM
AGEVLAEIDGWFETRIFAPLRSSDDPRAAIVAMLAGVDDYFRSGHRVCLV
GVIALGHARDEFAEPVNDYFARWHDALAAALRRGGIGASLARKRSEDAVL
TIQGALVLARARDDAKIFTRALAELKTRLLA
>RPB_3952 transcriptional regulator, BadM/Rrf2 family
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREA
GLVASERGPSGGWLITADPAAVTLRDLHQALGEPAIFAIGNRNETPECLV
EQVVNAALDSAFVDAEALLLERFAEVTLAKLSADFNRRHAAQRARK
>RPB_3400 Iron dependent repressor
MPLTARQKPAPHDGISTELPSEHTQARRFGKTRSAQSTALFEDYVELIAD
LLTGVGEARPTDIARRLGVSHATAIKAISRLKRAGLATSRPYRGVFLTEN
GHALAEKVHTRHRLVVDLLIAVGVPAEAAEADAEGMEHHVSDATLAAFAQ
FLESR
>RPB_2694 transcriptional regulator, AraC family
MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLR
SGLALHTSNTREVHDLHTEAVQHPGLTIALFLRGHIDAWFGGRLIEMGPR
TEDARDIEAIVVARSESDSFVRRSVKGARIRKLNVTITPEWLDQQALLSS
PECAAILRFSRTHLATLRWTASPRLITLAEQILGPPLFAAPLQKLYYESR
AIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFIDANLDHELMLP
SIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGE
AAYLAGYKTPGNFSTAFRRRFGVTPRQIRATS
>RPB_1961 two component transcriptional regulator, winged helix family
MSTAPPHILVVEDDRETRALIAKYLRNNECHVVTAQDGREMDSRLSDQRV
DLVVLDVMLPGEDGLSLCRRVRASSPLPIIMLTARGEDVDRILGLEMGAD
DYLAKPFNPRELLARIRSVLRRQSLAQTASATSGATALTFLGWRIDFRLR
ELRNPDGALVAMTSAEFDLLQAFCERPGRVLSREALLDLTHGRNAGSFER
SIDVLVSRIRRKIEPDPQSVSIIKTVRSGGYMFTPAVETV
>RPB_2431 transcriptional regulator, TetR family
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYS
NFASRDDLLLVLMERHVLGEVETLRRLVQVMDGEALGDVPATVAARLADL
AQQTEWSLLSIELQLHAQRDARFADAYNAAKISYHAEFARLVEDILQRHN
LAPALPPLQIGIGLYALWSGLAVQGTVPGAGPRDEIFLAFLRAVIGGSPS
PADGRQPSADQSAS
>RPB_3138 transcriptional regulator, LysR family
MTRRRLPSLIALRAFESVGRTGSVRAAGDELAVSHTVVSRHLQNLQKFLG
VALVRGEGRGVILTEAGLSFHQQISQAFDIIARATMNARPSSLPTLNIWC
IPGIANRLLLSRLPELTGPPRNWEVNLQPTLTHPDLVRAEADAEIVYADV
IDSRGSLMAEILVRPRVFPVASPAYLARYPAIGSLDDLSKIALIHEESTE
QWTRWFELAGLDDLPPLRGQRLWHAHLAIEAARLGQGVALGNEVLVEEDL
RSGALVEVLNSSVYMETYQLLALKERWDDPEIVALRNWLRRVLAGH
>RPB_1119 transcriptional regulator, GntR family
MRRPVTDATAETEDIRRRLNETQQPLYVSLSNLLETDIYEGRWPAGAQLP
TIAELSERYDVARVTIRQALGVLSAKGLIIPIQGKGTFVADQVKPRKTIS
LDSDWNYLLATLDGNSAESLDVIKSCALPSTVDGPEKHFKDYRYMKRIHR
AYDEPYCVNDVYLANDYYNRDPETFDRQMIIPHLTRVSRAKLKRMKQSVR
ITSADLAVAKYMNIPVNAPVAEVRRLITNRKDEIVFFSTGLYRGDLVVFN
TTIDVPG
>RPB_3305 transcriptional regulator, TetR family
MVMGRPREFDVDKALDLALHVFWRKGYEGTSMSDLTEAMGITKPSLYAAF
GNKEDLFRKAFDRYVDGPGGYFQAGLLQPTARKVVEHILYGAVEAMTDPN
NPGCLAVQGALCCGEAAETIKQELTARRAKGEQELCERFDRAIADGDLPA
ESNAGDLARYVSAILQGMAVQAAGAATPEQLRKLADMALRGWPPA
>RPB_1139 transcriptional regulator, XRE family with cupin sensor domain
MTTHDTVEGRKQQMKKPKPDPSSADPQRGAAEYRTGSNAPQDTERSLERA
LGAKIRAIRRERDLSVSDLSSASNISAGMMSKIENGQISPSLSTLQSIAG
ALNVPLSLLFAASEQRRDCSFVRAKQGVAIERRGSKAGHLYQLLGHVIGG
EVVVEPYLISLQEGASTHTAFQHAGMEFIYMLTGEVIYRHGDNSYRLRPG
DSMLFDSGALHGPETLVKLPMTYLSIIVYPRS
>RPB_2112 transcriptional regulator, IclR family
MGRRSERLCRQASGDPAGESDVIQVVSRAFDVLRCFEGAETRLGNLEISN
RCGLPRSTVSRLTHTLTRMGQLVYLPRDQKYRIGPSAVAMGTAMMRGLQL
RNLVRTRLQEVAEQIPGTIGFLIPDRFHLVYFEYARAPHALGLHSTTGSR
IAMAQTAGGHAYTAALDEDVANALLTEMSREFPQHAPLLRDRLEANRAML
RERGYVVSCGLFSPHINGIAVPMWSPQYQTYVVVNIGLLAAMYDEQRIHD
EVAPVLLRLSAAIDALIQNADGGLMTVGTAGKATSRPRPASSLAADVRPD
VRPAGRARELGAAEPRRQGQPA
>RPB_1907 transcriptional regulator, GntR family
MNEKIADRSMSQTVRAQLALRDMVLSGQLRAGERISELQAVDITGVSRTP
VRMALVRLEDEGLLQAIPSGGFMVKAFSERDILDSIELRGTMEGLAARLA
AERGVSARQLEPLKECLGDIDQLVQQDPVSVDAFSSYVALNARFHALLNE
LSGSSPVMRQIDRVAALPFASPSAFVMAQSALPEAHQILVIAQDHHRTVV
DAIENREGARAEAVMREHARLAVRNLRLALRNRTHLDLLPALALATASVD
K
>RPB_3039 putative transcriptional regulator, CopG family
MHRVTVTLDDDLMKKLDAIIEARGYQNRSEAIRDLARIGIQQTSAHASAE
HCVGAMVYTYDHSKRDLPRKLTQSFHNHHELSRATMHVHLDHDQCLEVTI
LDGKANEIQHFADHIFSERGVRYGRLVTIPTSGDGHAHD
>RPB_4220 transcriptional regulator, TetR family
MTLTSDNTEADMRHRILVVAERLFRQIGYQKTTVADIAKVLQMSPANVYR
FFDSKKAIHKGVARHLMGEVEQAADSIAAARGPAAERLRDLLTTVHRMNC
ERYIGDEKLHEMVAIAMEENWDVCVSHMQHVTGLIGKVIAEGAESGEFAV
ANVPMAAQCTCTSMMRFFHPQMIAQAFHKDGPTPDQMIDFVLAGLGAKRR
AISP
>RPB_0527 transcriptional regulator, LysR family
MNAKPDLSDLTAFAAIAAHRSFRKAANDLGVSASTLSHIMRTLEANLGVR
LLHRTTRSVAPTEIGERLLGRLNPVLRDFDAALQDLEAWRSRPSGTLRIN
AAEGAVRLLLQTVVPAFFARHPEMALDLVTEARLVDIVAEGFDAGIRIGE
AVPRDMVAVRFGGAIRFVAVASPGYLAAHPPPRTPDDLVHHACIRFRLKS
GQLFRWEFARHGQELAVDVAGPLTLDHVELMVEAAADGLGIAYVPDRTAQ
PYLSRGAVVGVLDEWCPKIPGLFLYYPGHRHVPAGLRAFIDVLRHLH
>RPB_1917 ErfK/YbiS/YcfS/YnhG
MMNNRILTLLATVAAISAGTSVVHAQNYPSAPGSYVTPAPGDYRQEMPNF
DNVDDEDGIGSSAALPPPGLVTSPDDPRYGRPSSAPVYSDRAPVPQGPVM
SPDDPRYGRPMGAPPVYSERAPVPQGPVMSPDDPRYGRPAGPPSVIYSNR
GDGSLRPPEGVAGAGQPGVPQVATGSVPAAPQIGADGRPLQVAALPPEEQ
PDADQEFQLPQHLRRQEVAFPTKEPAGTIVVDTGNTYLYYILGNGRAMRY
GVRVGRDGFTWNGVQKVSRKAEWPDWHPPTEMIERQPYLPRFMAGGPGNP
MGARAMYLGSTVYRIHGTNQPSTIGKFVSSGCIGMLNDDVSDLFERVKVG
TRVVVLPGGAPPTPTASAQSPQPVASAQPPQQSLQMSVPGTQPTSVAPLP
PPVTIR
>RPB_2205 sigma-24 (FecI-like)
MSRAPCNSDGTAHGLGEAVPVLRESFGQRSLLTVMVDRYGDLRRRLTRRL
GSADWADDALQDTYVRLNGSEVVGEVRNPVAYLLRAAFNNALNLRRAETR
RLSADEVDALLHIADDAPDVLRIIEGRSDIERLKRIMTELTPRQREILLA
ARVDGLSRHEIADRLGISVSLVEKELRRAQEFCMLRFQQKTPR
>RPB_2380 transcriptional regulator, XRE family
MVRAEVTTGEQPRLHRLLTSKVDHRPMVNQLQRLRLKADGRIVELRDGQE
FPLSPAAPEPATPAVRDLRRRARLTQTEFADRLGVPVDTIRNWEQGKRLP
RGPARALLSVIAHAPDTVFAALAGAGAADSTAS
>RPB_4518 transcriptional regulator, LysR family
MRFDLVDLQLFVAVVEARSITGGAARAHLALASASARIRGLEQALGVTLL
RRGRRGVAPTAAGESLFGHARVVLQDVEVMRGDLAAHARGLKASVHLLAN
TASLSEHLPKTLAEFLAAHPDFNVEVEERESAEIVAAIAAGAAEVGIAVD
TAVPDTLERFAFCDDRLVLVLPPHDPLAQRRGIRLAEVLQRDFVGLSGPN
ALHAHVAAQAARLGARLRFRARLRDFAGLCQLVEAGVGVAVMPETAVRAN
ARTMRIRAVRLLDEWASRKLVICARSLKALPRPAQQLVAHLRRSAPP
>RPB_0598 NusA antitermination factor
MAVSANKLELLQIADAVAREKSIDRGIVIAAMEDAIAKAARARYGSETDV
HAEIDAKKGELRLSRHMLVVENVENPANQISLKAAQRANPGAQIGDTIAD
TLPPLEYGRIAAQSAKQVIVQKVREAERDRQYSEFKDRIGDIVNGVVKRV
EYGSVIVDLGRGEAIVRRDEMLPRESFRNGDRVRAYIFDVRRETRGPQIF
LSRTHPQFMAKLFAQEVPEIYDGIVEIKAVARDPGSRAKIGVVSRDSSVD
PVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVSKV
VIDEDRERIEVVVPDTNNQLSLAIGRRGQNVRLASQLTGWDIDILTETEE
SERRQADFENSTRVFMEALNVDEVVGQLLASEGFTSVEELALVDIRELAS
IEGFDEETATELQARASEYLDRVETEMEARRLELGVEDALKDVPGITSKI
LVKLGEGDVKTVEDLAGCATDDLVGWTERKEGAEPVKFAGILDGVEGVTR
DEAEDLIMQARVKAGWITEEELASSKGEAAIAETEAEAE
>RPB_1862 conserved hypothetical protein
MAAFDDIIHQPLRLKIMAALNALPDAQGMEFARLKKLTGATDGNLGAHIE
TLSKAGYVAVDKTFVGKKPQTTVTASAAGRAAFARHVATLREIIAGAVPG
GG
>RPB_1659 transcriptional regulator, MarR family
MSKKKVTDKRRGKSKSTSHYLLDAQVGFVLRQVLQRHATIFVGRMGEDLT
MTQWAALSKLLELGPCSQNLLGRHTAMDAATIKGVVERLVKRGLLETSPD
PEDGRRLLVALTPEGAALAERSIPVAHEITKATLSPLAKEERTLFLSLLE
RLK
>RPB_1791 cold-shock DNA-binding domain protein
MSMGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISY
EIVADRRSGKSSADNLRAAS
>RPB_0381 two component transcriptional regulator, winged helix family
MPNARKILIVDDDTDLRDALVEQLSLHEEFEASAVDTGAKGVQSAKANSP
DLVLMDVGLPDTDGREVVRSLRKGGFKAPIIMLTGHDTDSDTILGLESGA
NDYVAKPFRFAVLLARIRAQLRQHEASEDAVFTVGPYSFRPGSKMLTGAN
AKKVRLTEKETAILRFLYRAGQAPVSRETLLQEVWGYNSGVTTHTLETHI
YRLRQKIEKDAANPEILVTEAGGYKLVP
>RPB_3060 sigma-24 (FecI-like)
MSHKLAGEFIDRIIALRPVLLRHAAFLIGSRADIGSPEDFVQDTLVTAFQ
HGNRFDDGSLSGWLTAILRNHISNARRRANRRNLVLEPLDATGGGAGMND
FPVVATQGLALDLEDAMAALSTLSSIDQEIIWLARVDGLSPEEIGARLGL
AAGSVYSRLSRATTKLRATYDAPPAASLMRPRVPFRHAA
>RPB_0920 hypothetical protein
MTTPQPGAREAFAFLRSVCRNFPERLMLGEAIRNQWPAHAIEAAARQYKG
RGDLKYRLAIQDASKRRYYSPEERAADYAALHERQAELEARSAMKATKAT
RPSVPPEFKAARAACRSVLDCDRLKAALEAGWLPEQLNYVARQLSKKASR
VAFRETPAAYRHAFEFINGADPAHFTFLPLSLQSAAHEPHANA
>RPB_1709 transcriptional regulator, MarR family
MRRFSRSLPMALLRGREAVMRHFRPLLRAHGLSEQQWRILRALTEVEAIE
VTELADRAFLLGPSLSRMLRDLEARKWIARKPAKDDQRRSRVSITPKGLK
LIETVAPFSEQIYADIARHFGDAKLAALQDMLGALEADLTRMPVRHAADA
VDSGPDFRSTVRSKRRPAKSTAAKGGRR
>RPB_0480 sigma-24 (FecI-like)
MTEASWTVLREVLAERYDELCRRLAVRLGSKEAARETLHETWLHLRSGND
PVEVQRPFGYLLRTALNLAISRERTEQRRNKQLDVVDMLELVDPAPGPER
EAEARRQVEFLEQVLQELPPRRRAILLASRVEGVPLKRIAEHLGLSQRFV
EMELKAALEYCARRFGKKLTRRFGPRSKEASS
>RPB_1826 transcriptional regulator, TetR family
MSQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAA
RETAVEGGMAAVQIAPVASRANVAAGTVYRYFPSKADLISELIADVSRDE
LAAIRRAADAAPGPSSALAAAVTTVAVHVLSHRKLAWGILAEPVDVDVSA
SRLASRRDIAGEMESRIDAAVRAGHLPAQDTALAATALLGAVHESLVGPL
APDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQAVVPSRILVGA
>RPB_0759 sigma-24 (FecI-like)
MAHALHTEPVDTLATPPAASATLAPDAIVPHDPDAPRDIDEELLDRLAAN
DEAAFRLLVERHIDRAFGIALRLLGSRADAEDVVQDTMLKVWTHRGRWEH
GRAKFSTWLYRVVTNRCIDLHRRPRTDNVDAVPEPADAKPDACSTMQRNE
ITQLLETAIQKLPEQQRVAVILSYHENMSNGDIAEVMSTTVAAVESLLKR
GRQQLREILRRHEPDLLQAFTDC
>RPB_4504 transcriptional regulator, LysR family
MTKLPDFEALAIFAKVVELRSFAATAAELALSKATVSKAVTRLEARLGAR
LFNRTSRRLALTDAGQRLAERAAQLLADGEAAESEALAQSAAPRGLVRLA
VPMTFGVKVIAPLLPDFLAAYPEVSIDLHLSDAMVDLIGEGFDAGVRIAS
LPDSSLVARRLCAMPRYTVASKAYLAQHGRPTHPMHLAAHRCFGYAYLST
PNVWTYTNAEGEQASVRPSGPLRVNNGEAVLPAVIAGLGIADLPEFIVGD
AIAAGAVEVILQGWHQREGSVHLVMPPGGPRPARVEVLAAFLADRLGPKR
RLPS
>RPB_2487 cold-shock DNA-binding domain protein
MQKGTVKWFNPTKGYGFIRPTSGDKDVFVHISAVERAGLSTLNENQAIEY
DLVENRGKTSAENLKLT
>RPB_3088 transcriptional regulator, AsnC family
MFDPIMTQKIDQIDLRILAAMQADSSRSQRELAEEVGLSQNAFWRRLKAL
EASGAITGYGARVSQEAVGVPMTVFVMVRTRRHSAEWLKRFRAQIESISE
IVAFYRISGDFDYMLKIAARDMGNYDKVYQTIINKTELETVTSYFSMEAI
IDGRPLPIGR
>RPB_0609 transcriptional regulator, LysR family
MVTLRQLRYLSALARFGHFGRAAEACAVTQPALSMQIADLERTLGVKVVE
RRPGEVFLTEIGREIARRGEDLLTASRDLVDFARHRAQPLTGRLTLGVIP
SLAPYLLPKLLPLLQQRYPELRLELRESQTRQLVTEVGSGALDAALLALP
AGNRELDAITLFDDEFLLAVPADDPRPETATVAVDEIDQSRLILLEDGHC
LRDQALAFCATARNRAIAIGGTSTTTFGASSLTTVIQMVAGGYGVTLIPQ
IAAEIERRDTRVKFLRLRRPQPGRTIGLAFRKTSPRRQDFEALGEVVREG
VGGRSSMAQPAA
>RPB_2852 DEAD/DEAH box helicase
MSARRGALQLAQNASKAAGHIRPNRAGPMRPALLNPLFAPVTGLTGVGPK
QDKLFRYLLDRDDTPRLADLLLHLPVSVIDRRSRPKIRDAQPGTVVTLEV
TVDRHRPPPPGRSRAPYLVYASDETGDVILTFFRAKPEFVEKLLPVGAKR
YVSGTGQLYDGTLQIVHPDRVVDEEGFAKLPKIDPVYPLTEGLAIGSLRR
AVAQALTRLPALPEWISPEVLRRCSFPAFAEALQRVHIPHEPTDILPDGP
FWSRLAYDELLAGQLALALVRAQLRRPAGTRNAGDGRLRHKIIDALPYAL
TASQQAAAAAIAEDLQQPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQ
AALMAPTEILARQHIKTIAPLAERAGMQVAILTGREKGKERRDLLARLEA
GEIDFLVGTHALIQDDVTYNSLALAVVDEQHRFGVRERLALTSKGDAVDV
LVLSATPIPRTLVLTYFGDMDVSELREKPAGRQPIDTRALSDTRLPEVID
GIGRAIAAGKRVYWICPLVEESENVKLTDAEQRYESLRQRFGDQQVGLVH
GRMKGADKDRVMAQFAGGEISVLVATTVVEVGVDVPEASIMVIENAERFG
LAQLHQLRGRIGRGSEASTCLLLYKEPLGEMSAARLRVIRETADGFRIAE
EDLKLRGEGDVLGTRQSGLPGYRIARSEVHGQLITQARDEALRILEDNPK
LEGPSGEALRCLLYLYERDEAIPLLGAG
>RPB_3065 two component transcriptional regulator, LuxR family
MPETSIRLLIADDHPVVRAGLRLVLGTISGLSVVAEAESGEEALYLCSKH
RPDIVIMDVKMAGIGGTSSTRAICQTYHPGTRVLGLTTEADTTTVSQMID
AGASGLLLKTCTVNELETAIRDVLAGRIVLDPLLQKGAPRARTAAAESEI
TLGSQQKKVLALLVKGFTNSEIAERLGISLPTARYHVSAILVKLGASNRA
EAAGLAVRLNIVGADDY
>RPB_1683 transcriptional regulator, TetR family
MAAQPNPVLATRLPAVKNSTADKLLVAAGELMIERNSVEISLSDIAQKSG
VNAALVKYHFGNKDGLLLALLERDAATEMTNLDYLLEQPLSATTKMKLHI
AGIIKAYHQFPYLNRLIHYLLHGSNREAADEVTKFFVGPLLDFHRRLIAE
GVAAGEFRNVDPVLFYTTLIGACDHLFFGRQTMMRAAGVGPVTDEVCRAY
VGHIELIILGGLLLPKGGAKPKQTAAG
>RPB_4406 transcriptional regulator, IclR family
MVSVGKTATGSQTVARALAVLELLGQEGELGVRELGRQLGVAPSIAQRLI
NTLSEAGFVEKSLGNSKWKIGYKAFQIGSAFLASTDLNAATAPELHLLAE
QHQVNSFLGVLRGQDVVYLATVQSGGPISITNAPGSRTYLHSTALGKALL
LDRSDDEVQALLGTGPLKQLTKKTKRSVSAILKDLKEGRRLGYVICDEEN
LENVFAVGVPVRDASGGIIAALSGAVPRQRLSARAIEELCELVKASATRA
SRRLGSLK
>RPB_2212 sigma-24 (FecI-like)
MTEAGWAALQQRLLLRYDDFKRRLTRYLGSSELAGDALHDTWLRLQRGGQ
IDAVRSPDTYLLRIAINMGRDHLRAENRLVSTSDAATLLGISDDAPDAER
DAEGRSELRLLTAIMAELPPRQKAILIAARVEGLPRGEIARRYGVSVRYV
HRELQAAHDYCAERLEKMTADLYRLAPRETSLPERLSSPLPGGPHILAAR
DD
>RPB_2608 (p)ppGpp synthetase I
MASGRRIPRQVEAVADAATVATPVVVPPKPRGARARMMRQYDLVELVRNY
NPNTDEDMLNRAYVYAMKAHGEQTRASGDPYFSHPLEVAAILTNLKLDDA
TIVAALLHDTIEDTEATRTEIDKLFGHEIGSLVEGLTKLKRLELVSREAK
QAENLRKLLLAIADDVRVLLIKLADRLHNMRTLDFVPPAARQRIAEETLD
IYAPLAGRMGMQEMREELEDLSFRTLDPEAFAVVMQRLDALAERNRNLIG
EIETQLCANLANNGIAAEVTGRRKRPFSIWTKMERKSVGFEQLSDIYGFR
VVLNDIEACYRALGVVHTTWPMVPGRFKDYISTPKQNDYRSLHTTVIGPG
QQRVELQFRTQDMNQIAEYGIAAHAFYKDGVGSPTELLNRESNAFAWLRH
TVEMLSESTNPEEFLEHTKLELFHDQVFCFTPKGKLIALPRAANVIDFAY
AVHTDVGNSAVGCKINGKFAPLSSELQNGDEVEVLTSSVQSAPPAAWESL
ARTGKARAAIRRATRTAMRDQYAGLGRRIVERLFARAKIEYADDKLRGAL
PRLARASIEEVMASVGRGEMKASDVARAMYPDYKEERIARFGGKKPEKAG
TKAVGEPSKVGAAVPIGGIHSGLPVKFAPDGGAVPGDRIIGIVTPGEGIT
IYPIHSPALKDFEEEPERWLDVKWDIDETTPQRFPARLFVQNVNEPGSLA
QIAGVIAEHDGNIDNINMSRRSPDFTELTIDLEVYDLKHLSAIIAQLRAK
AVVAHVERVNG
>RPB_2176 cold-shock DNA-binding domain protein
MPTGTVKWFNGQKGFGFIAPNDGGNDVFVHISAVERAGLSGLAEGQKVNF
ELKTDKMRGKTSAENLELV
>RPB_3595 transcriptional regulator, LysR family
MTLEQLRIFIAVAEQQHMTRAASGLNLTQSATSAAIAALESRYDVRLFDR
VGRGIVLTQAGRDFLEEARAVVARARAAAQALDDIAGLKRGALSIAASQT
VGNYWLPPRLLAFQRNYPGIALQVTIANTEQVARAVRDGHADLGLVEGEI
DDPLLTNDRIDGDSLAIVVGKRHPWIGTTQIAENKLTTTGWILRERGSGT
RSMFEAALRDIGVDPSSLDVKLELPSNEAIRAAVESSDYATAISDLVVAP
SLAAGTLHRVRFELPRRSFCVLRHREHSGGQAEKAMLAALYAE
>RPB_3317 response regulator receiver domain protein
MKVLLVEDEEHKANDLTARLYKLGIAKHDLTTVSGVRHAVLHVTEGHFSL
IIVDMALPTFSDISSEGSGGGDAQAVGGIEVLRALFAAGVSSTIIIVTQY
PDIIVSGTRVRLTSAARVLSKKYKQNVLGAVLYSYKSPDWETAFDTLVRK
AQ
>RPB_2652 transcriptional regulator, MerR family
MDKAPDAFRTISEVADELDIPQHVLRFWETRFTQIKPMKRSGGRRYYRPD
DVDLLKGIRRLLYGEGYTIRGVQRILKEHGIKSVQRLADNEASATFGAVE
EAIGRSVAEEDYEPAPGGIDLDDDDYEGENEGLDLHAMMAEPDLRAAAAP
ARSASQATARRAPAFEDDDDDLPAMASPAPRLNLPPLDLPPANNAPARPP
VDLAPLKAVLQDLIACREALDAAMKDG
>RPB_3101 transcriptional regulator, TetR family
MARRSSDPARVREKILKLAMEEFARTGFDGARVDRIAERSKVSKNMLYYY
FKSKEGLFVAALERMYEEVRDQQRELSVRAHDPILAMKQLVEHTFQALES
NPNAIRLMNEENKQRGRFLRKSKRIRDLYNPLVETISFILERGRVEGVFR
PGLDSAVVYMTLSSLCYHYLSNRYTLEIALGKDLASAASRKAWVEHVGNI
VLLYCTAEVPSTTAAKTAVMRQRATSDADA
>RPB_0105 GCN5-related N-acetyltransferase
MPRPRLALISRMSTTLIEVRPARAADASAVAGTHDEAWRSAYQGIIPGAE
LEKLINRRGPNWWDSAIRKGSRVSVLCFGDKVAGYANYGRNRARSLHFDG
EIYELYLRPEFQGLGFGRRLFAAARRDLAQSGLKSMVIWALSDNEAATEF
YRALGGRMVARSSERFGPKSLDKVAFAWSN
>RPB_3340 regulatory protein GntR, HTH:GntR-like
MATPLNSETTHTVRRTLEFVQHHRLAKGDRLPSERELSERFGVARSSVRE
ALAVLDAMRITERKPKSGIFLRNAVEDGGLDALVLQADLGLAFDPQVTRD
VTEARIICEEQALRIACRRRTDADLAKLHRLLDGYAGLVDADRNPADADV
DFHLALVAASQNRILVRTLTPLMLMSTNWRRRYFDSAAIRRRSLDDHRAF
VAAIEARDEAATSALVQRHVQTAAADVRALAEQGGATATDTPSKSDTRAS
DAPT
>RPB_2330 metal dependent phosphohydrolase
MSAWGHSAEWGAGRSGEAVRGRPHDGLRLRPLLVFDDPAYESDFVRYYNR
FYYRYAQVSLIVGMLLVSADFLVDLLASKATPANLDRLLLCVPLLGLGLV
GSFADYARRHWQPVMSGLITAIAGSLFWVLLVIDNQGGMGMTSWVGILNF
VFLEFYCFVVLGVQFRYALAAGAIVLAMFELALLRAIGADSGAFLYLSYH
AATLFILAAGIGWWREFLLRKGFAAQTSLRAAQNVLRNQNGHLELEVEKS
TQRIQRTQDVTIEILTSLAETRDNETGNHIRRTQHYVRALARRLQSHPAF
AAYLVEAQIDMLFKYAPLHDIGKVGIPDSILLKPGKLDPHEFEIMKTHTT
LGYQTIVNAEKRLGTPVAFLACAKEIALSHHEHWDGNGYPNRLAGEAIPI
SARLMAVADVYDALTSRRVYKDAMPHDRAVAIIKDGSGRQFDPDVVDAFV
AIAADEFKTIAARYAD
>RPB_3454 two component transcriptional regulator, winged helix family
MFIGHSRRRRSSSSRRSQRPCIETAEFKVRLLVVEDDPDLNRQLTTALTD
AGYVVDRAFDGEEGHFLGDTEPYDAVVLDIGLPKMDGISVLEAWRRNARA
MPVLILTARDRWSDKVQGFDAGADDYVAKPFHLEEVLARIRALLRRSAGH
AQSELTCGPVVLDTRTGRVSVRGHPVKLTSHEYRLLAYLMHHSGRVVSRT
ELVEHLYDQDFDRDSNTIEVFVGRIRKKLDVDIIQTVRGLGYLLTPPPAD
AQLANRT
>RPB_3642 transcriptional regulator, TetR family
MARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYH
YYRSKDAVLFDLLADHLQHLVGVVESAARSEGDAGERLFAIAAALLEAYR
GADAEHQVQISSLKLLPGEQQEELKALERSLVSLMSDAISAAIPATAAKP
HLLKPLTMSLFGMLNWHYLWFREGKGLNRQTYAKMVTTLMVAGAEQAMDA
VEDDDAEPGRTTSRRKNERPAVARRAG
>RPB_0140 transcriptional regulator, LysR family
MIESAAIRYFREVTESGSIKQAAATLRIAPSAISRQIQAIEEEMSVKLFE
RNARGMALTDAGRLLYRYAVENRSQLDGIRAKVQEFETMRRGQIRFATVE
GMLANFLSNFLVELSVDYPGIFVSTTVVGSRAVAELVGRNEVDLGLVFGR
APRRDLIELARMRQSLCLIVAPDHPMADREACAVKDLAGLRVIVPDPSFG
IRQEVDRACANAKVRLEICSETNSLAFAQMLASRTDLATFLPRDTAMPAI
AAGRLVAVPLRDKRLEATQVTLVQLATRNISPSCRMVADLLIARMKRARE
>RPB_4173 two component transcriptional regulator, winged helix family
MIQLATLAKKPVRPADDAPHLLLVDDDRRIRDLLSRFLASEGYRVTTAQS
GRDARAKLAGLNFDLLILDVMMPGETGFDLARFIRTESDVPIVMLTARHE
AEARIEGLQLGADDYVAKPFEPRELLLRICNILKRTSPAPASKAETIAFG
PYVFHIDRGELRQGDETIHLTDRERDMLRVLAAAPGETVPRGELTGGGGN
ANERAVDVQINRLRRKIERDPANPLFLQAVRGIGYRLVAAP
>RPB_2259 transcriptional regulator, TetR family
MSTDTTRTAILRAAERLYAERGFGDVTLRDIVAAAEVNLAAVNYHFGSKD
ELITELFVTRSIATNRERLNELKAVEAAGGGRAPVDDVLRALVGPTMRGC
LGPDSQRSDAARFMIRASIEAIPAIRKIKTREIDHLRKFAAALRRSLPGT
ADVEIYWGLHFALAMAHQTVRDSERLLRLSDGACDLNDVDGAIARVVNVA
ALALTAPKPSAAAKAPARRER
>RPB_3378 transcriptional regulator, LuxR family
MPIHDSAAVASDLSRPATPAAFAEAAMLSLRPVFGASRAVLSDRQRGRPG
EMHFVNWPSWCQAHYCAEVRARDPIRSWLDREASENGVTRLSELLPATRR
AALPRETLLADSGAGFVLIMALREQNRIVGALSLVRDAGHGDFDERDRGL
ALALLPLLEMAYHGVIARGAATVPLFAGNDPLHALTPRERQVAALAAAGH
PNKSIARMLDASPWTIKNHMRAVLDKTGTRNRTELSALIGSQRETARPG
>RPB_0180 transcriptional regulator, AraC family
MQRLTTSGDRPSTARAFVYLTQILQKAAETVERDPALARCCIERAVALLR
DVQARHELIDEVPPETLDHPGLARWQLNRVVAHVEQNIDRSLRIRDLAQL
IDLSASHFARVFRRSVGVAPRNFVLERRVARAKLLMQTSELPLSEVALAC
GLSDQAHLSRIFRRFTGMPPNAWRRQRRDRESQDDGELASKPISRAVADS
QPSRTTRFNRSTGAERAATSKLA
>RPB_4131 sigma 70 (RpoD)
MASKAKTVQLKDKEKDDKADAPEKDSADAPSPLLDLSDAAVKKMIKQAKK
RGFVTFDQLNEVLPSDTTSPEQIEDIMSMLSDMGINVSEAEESDSEDEDA
KDEAEEEPDNDLVEVTQKAVTETKKSEPGERTDDPVRMYLREMGTVELLS
REGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWRDELNEGKIFLRDII
DLEATYAGPDAKANMNPAMAEGAGEEASAEGEADAGAPAHVAPPAAPPTA
TPFRPAQQRSAPAAAPAAGEGGGEGAAEGDMDDDEFENQMSLAAIEAELK
PKVVETFDKIADNYKKLRKLQEQDIANQLESASQGPSLSPSQERKYKKLK
DEIIVEVKSLRLNQARIDSLVEQLYDINKKLVSFEGRLLRLGDSHGVARE
DFLRNYQGSELDPRWLNRVSKLSAKGWKNFVHFEKDRIRELRQEIQSMAA
LTGLEIGEFRKIVHSVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGL
QFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQART
IRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK
IAKEPLSLETPVGDEEDSHLGDFIEDKNAVLPIDAAIQSNLRETTTRVLA
SLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLK
HPSRSRKLRSFLDN
>RPB_0303 transcriptional regulator, TetR family
MVQAAPHPTIDSPAPDVRMSPRDRLIESARVLFCRYGINSVGVDAIIENA
GTAKTTLYKLFGSKDGLVEAVLQREGQSWRTWFIDEIDGPGGSARERLAR
IGPALKGWFSRPDFYGCPFINAVGESDKADDRMRSLAIAHKTIVHDRLTA
LCTEAEIAEPAQVAHTLGLVIDGAIVMALVTRDAGAADVAGRACAAILPA
>RPB_1327 GCN5-related N-acetyltransferase
MTASVAPRGQVRALGPADTDRYCNHLARLDPAARRMRFFADVSDFHVLFH
AGAALSDGRAVVGYVEDDEIRGACELLETDRADHGAEAAFSVESDWRCQG
IGGLLMAAMIADARRRGVLRIEMQCLKSNAPMQALAARFTSDLRQIGDTT
LAVLDNSPAIPAA
>RPB_4489 GCN5-related N-acetyltransferase
MISKKMDARIKSGHDDCAHMTPFTLRPYRDADEDAAIDLWHRTWQLAYPA
IDFDKRVDWWRARWRGELVPQAAIVVAEQDGALTGFVTIDASGYLDQLVV
GPEQWGTGLAAALVDEAKRLSPREVTLKVNADNVRALKFYQRAGFITTGE
EVNSSARPVLNMRWAP
>RPB_4432 transcriptional regulator, IclR family
MNAVTFIGMVGMGAESQSVARAVDILQLLSDNGSLGVREIARRMELSPTI
VHRLVSTLASTGLAEQAPDTQKYRIGYRAFRIGSSFLSQNDLDRASTPEL
VALAEQHQISSFLGVLRGGAMVYLKVVKSNGPIAINNQPGSLAAIHSTAF
GKVMLAALPDKEAAEVLGKEPYKRLTKKTKVTFRALLGELREIRETGIAI
SDEENLVNVYSVGAAVRDASGEVIASLSGAVPRQGMTKREIEHVNALVKS
AADSVSRKMGAPSAPSGGRGR
>RPB_1515 GreA/GreB family elongation factor
MRRPRRPRRMLKDKGKMVEKVPMTAGGYAALSDELKKRQSVDRPRIIEHI
AEARSHGDLSENAEYHAAKEEQSHNEGRIAELEDKLARADIIDISKLSGD
TIKFGATVTLIDEDTEKKAVWQIVGENEADAKKGKISITSPLARALIGKT
KGTSVEVVAPGGAKAYEIAKVEWR
>RPB_3252 transcriptional regulator, AsnC family
MPDLDAIDRKILASLQADGRITMQELADKVGLSVSPCHRRVKLLESRGVI
TRYTAQVDQKAIGLHVSVFISIKLTRQKEEDLARFARAISKWDEVLECYL
MTGNRDYLLRVVAADLAAYESFLKTKLTRLDGIASIESSFALSQVKYSIA
LPV
>RPB_1151 transcriptional regulator, AsnC family
MDRIDLKILGCLQDDAMMPVAAVAEKAGLSTSPCWRRIQALIEKKIIRRR
VALLDANLVNVPVTVFVTLKTNKHHSKWMTTFAREIAKIPEVTEFYRMSG
EVDYLLRIVVPDVAAYDNVYKRLISAAELFDVSSSFAMETIKYSTALPLN
YAKV
>RPB_4565 two component transcriptional regulator, LuxR family
MSTPASTHLIIADDHPLFRDALRLAVSSVVPGAKIGEAGSFEDLTAMLER
DGDVDLVLLDLKMPGISGFSGLIYLRAQYPAIPVVVVSASDDVETIRRSL
DFGASGFVPKRFGVEKLGDAILRVLDGDVWVPPDVDLSAAADPETSKLRD
RLVTLTPQQVRVLMMLSEGLLNKQIAYELGVSEATIKAHVSAILQKLGVE
SRTQAVIAAAKISGSQWRQDEPVA
>RPB_1140 transcriptional regulator, AraC family
MPKTLPAPASRPSRVGFLLIDGFALMSFASAVEPLRAANAIAGRTLYQWF
HVSIDGRPIGASSGLSIQPDCAIDGAQEFDIVLVCAGGNPTKFSDRRTMS
WLRAQARRGVAIGGISGGPYLLARAKVLDGYRCTIHWEHAPAFAEAFPHL
DLTRNLFEIDRERLTCGGGVAGLDMMQALIRRDHGPELAAKVSDWFLQTN
VRLGDSSQRPNARERGRLGHPALQAAIELMERRLREPASRTEIARAAGVS
LRQLERLFTTHLKTTIERRYLMIRLQRARTLLRQTSLPVTQIGADCGFVS
LAHFSRVYRQRFARTPSADRRL
>RPB_4649 two component transcriptional regulator, winged helix family
MSVKSRVLVVDDEPAILRFLKPALEANGYDVSHAATVTEAIKRVAADAPD
IVLLDLGLADGDGKDVIRQVRAWSDLPILVLSAREREAEKIESLDLGADD
YVNKPFNSGELMARMRAALRHRMQRNAEPAALSVGGIEIDAVRHRVTRDG
DEIKLTPKEFELLAFLVRHAGRVVTHRQILAAVWGPAHTSDTQYLRVYIG
QLRQKIEAHADEPRIILTEPGIGYRIGDAG
>RPB_2794 transcriptional regulator, LuxR family
MSESSALSDLIGTIYDAALDPTLWIRTLEQSCDFVGGSSAALYWHDTATV
RAQALYLIGEDPHYTKLYFEKYLSLNPTFPAAAFVEPGVIFTPTDIVPES
ELVKTRFHREWVQPQGIVDVIGVNLEKGTTASSLFNIRRTHKHGVADAGA
RERTALLVPHFQRAVAIGRLFQQASKAEAVLTETLDLVEAAVFLVGVNGR
ISFANGPGRAMLEEGTLLRERRNMLTAVAPESNRMLREIFIAAEDGDTSV
GNRGVAIPLASSPHQRWFAHVLPLTSGDRSRNGSLPSAVAAVFVRKTSPV
SPPPLEALANIYKLTASELRVLDAMTKVSSVRAASELLGIAQATVKTHLH
NLFRKTGSHRQSDLVKLMAGFEPPPPSS
>RPB_3829 transcriptional regulator, LysR family
MVIRMPRPLLNLDLDLVRAFVAIATLGNFTRAAESLRRQQSTVSLQLQRL
EDALGRKLLERNPRSVRLTPEGEVFLAHARRLLDVNDELVARVTEPALHG
AVRLGTPEDFATRHLPEVLSRFARAYPAVALEVTCDLTLHVIDGFRKGSF
DLALIKRERVGEAAGIRVWREPLVWVAGEAAPQQRDGPLPLVVSPSPCVY
RKRATEALDKARRPWRIAYTCGSLAGSLAAVRGGLGVTVLPKDMVPEDLH
VIDGGPLPSLRDTEIALLQRERLSLPAQRLKEHIVRSLG
>RPB_0368 conserved hypothetical protein
MIAASNPERLVSPMNTEVDAGVVLTKATVRAAERLGLSQKVLSNVIGLSE
SVISRMKSGDYVLDRGKAFELAALFVRLYRSLDAIVAGDETAARKWIKAE
NLALRGTPVELIQKVQGLFHVVQYLDTRRAPV
>RPB_4302 transcriptional regulator, ArsR family
MEAAADQASDLLKALANRHRLLIVCQLIGGERSVGDLAEVLSLRDSTVSQ
HLALLRKDGLVAARRDAQTIYYSIASEPARELLTTLYRLYCPAPPARKTA
SKPEKA
>RPB_0486 sigma-24 (FecI-like)
MDHPRRKPPAVSQDLSDCIVRIATDHDEAAFDVLFRHYAPRLKSYFTRRG
GDPAMAEEITQETMVSVWKNAAQFDPAKASATTWIFTIARNLGIDRLRRA
KRPSFDPHDPAFVPDEEDPPDRQFERAEAQRRVRDVMNTLSSNEKSVLML
SFYENQSHGEIAQRLGLPVGTVKSRIRLAFGKLRAALEPLTGAGR
>RPB_2987 TfoX-like
MDREFLIDLFSPFGPVTIRRMFSGFGISADGVNFALVIQGAIYLRADAET
IPRFQAEGTAPFHYTTRLRTVTVGSYWRLPDRLLDDPDELAQWARASLAA
AERAALTKTRKPKSKPRAAASAAKPKRVRQRGA