Gene list
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COG category: Transcription
Organism: Frankia sp. CcI3, CcI3
Number of genes found: 324
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| Frankia sp. CcI3, CcI3 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Francci3_2283 | transcriptional regulator, TetR family | chromosome | CDS | 2663745 | 522 | + | 0.741379 |
| NA | Francci3_0208 | transcriptional regulator, XRE family | chromosome | CDS | 246568 | 834 | - | 0.693046 |
| NA | Francci3_3755 | sigma 28 subunit | chromosome | CDS | 4503677 | 1017 | + | 0.698132 |
| NA | Francci3_2143 | hypothetical protein | chromosome | CDS | 2511710 | 525 | + | 0.702857 |
| NA | Francci3_3907 | transcriptional regulator, PadR-like family | chromosome | CDS | 4676181 | 624 | - | 0.735577 |
| NA | Francci3_2510 | putative transcriptional regulator, Fis family | chromosome | CDS | 2964579 | 1848 | + | 0.6829 |
| NA | Francci3_2618 | GCN5-related N-acetyltransferase | chromosome | CDS | 3091664 | 666 | + | 0.66967 |
| NA | Francci3_0706 | transcriptional regulator, TetR family | chromosome | CDS | 808654 | 1152 | - | 0.689236 |
| NA | Francci3_3148 | transcriptional regulator, TetR family | chromosome | CDS | 3726974 | 696 | - | 0.70977 |
| NA | Francci3_1013 | hypothetical protein | chromosome | CDS | 1207574 | 273 | + | 0.663004 |
| NA | Francci3_3753 | GCN5-related N-acetyltransferase | chromosome | CDS | 4502288 | 576 | + | 0.723958 |
| NA | Francci3_4324 | sigma-24 | chromosome | CDS | 5165651 | 774 | + | 0.69509 |
| NA | Francci3_2780 | transcriptional regulator, MerR family | chromosome | CDS | 3274433 | 435 | - | 0.65977 |
| NA | Francci3_1376 | (p)ppGpp synthetase I | chromosome | CDS | 1650989 | 2589 | + | 0.702588 |
| NA | Francci3_3239 | transcriptional regulator, ArsR family | chromosome | CDS | 3834446 | 411 | - | 0.698297 |
| NA | Francci3_1818 | hypothetical protein | chromosome | CDS | 2154000 | 804 | + | 0.671642 |
| NA | Francci3_4528 | transcriptional regulator, PadR-like family | chromosome | CDS | 5405130 | 819 | + | 0.702076 |
| NA | Francci3_4436 | serine/threonine protein kinase | chromosome | CDS | 5303179 | 2076 | + | 0.707129 |
| NA | Francci3_1558 | cell envelope-related transcriptional attenuator | chromosome | CDS | 1867985 | 1638 | - | 0.716117 |
| NA | Francci3_0167 | sigma-24 | chromosome | CDS | 197358 | 879 | - | 0.726962 |
| NA | Francci3_0312 | putative transcriptional regulator | chromosome | CDS | 359872 | 1167 | - | 0.74036 |
| NA | Francci3_4426 | cold-shock DNA-binding domain protein | chromosome | CDS | 5292779 | 396 | - | 0.714646 |
| NA | Francci3_2250 | transcriptional regulator, LysR family | chromosome | CDS | 2627118 | 963 | + | 0.734164 |
| NA | Francci3_1446 | serine/threonine protein kinase | chromosome | CDS | 1736879 | 1941 | + | 0.727975 |
| NA | Francci3_0390 | transcriptional regulator, XRE family | chromosome | CDS | 461148 | 315 | + | 0.638095 |
| NA | Francci3_3254 | putative transcriptional regulator | chromosome | CDS | 3853486 | 585 | + | 0.68718 |
| NA | Francci3_2233 | transcriptional repressor, CopY family | chromosome | CDS | 2604825 | 402 | - | 0.731343 |
| NA | Francci3_4017 | transcriptional regulator, XRE family | chromosome | CDS | 4804477 | 375 | + | 0.674667 |
| NA | Francci3_1079 | hydrogenase accessory protein HypB | chromosome | CDS | 1284931 | 894 | + | 0.715884 |
| NA | Francci3_0044 | serine/threonine protein kinase | chromosome | CDS | 53428 | 2592 | - | 0.706019 |
| NA | Francci3_2788 | hypothetical protein | chromosome | CDS | 3281972 | 399 | + | 0.734336 |
| NA | Francci3_0301 | transcriptional regulator, XRE family | chromosome | CDS | 349944 | 504 | - | 0.609127 |
| NA | Francci3_2874 | serine/threonine protein kinase | chromosome | CDS | 3389367 | 1815 | + | 0.75427 |
| NA | Francci3_2207 | putative transcriptional regulator | chromosome | CDS | 2582455 | 333 | + | 0.711712 |
| NA | Francci3_1039 | two component transcriptional regulator, LuxR family | chromosome | CDS | 1235124 | 717 | + | 0.641562 |
| NA | Francci3_4047 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 4831006 | 2751 | - | 0.704108 |
| NA | Francci3_1453 | putative transcriptional regulator | chromosome | CDS | 1744313 | 576 | + | 0.729167 |
| NA | Francci3_0961 | transposase, IS4 | chromosome | CDS | 1133945 | 750 | + | 0.658667 |
| NA | Francci3_2758 | transcriptional regulator, TetR family | chromosome | CDS | 3250522 | 696 | - | 0.679598 |
| NA | Francci3_4137 | transcriptional regulator, TetR family | chromosome | CDS | 4938512 | 708 | + | 0.721751 |
| NA | Francci3_0524 | response regulator receiver protein | chromosome | CDS | 609331 | 546 | + | 0.699634 |
| NA | Francci3_3568 | transcriptional regulator, BadM/Rrf2 family | chromosome | CDS | 4266044 | 456 | - | 0.699561 |
| NA | Francci3_3092 | Glucokinase ROK | chromosome | CDS | 3663788 | 1059 | - | 0.717658 |
| NA | Francci3_0179 | putative acetyltransferase | chromosome | CDS | 211430 | 612 | - | 0.697712 |
| NA | Francci3_3806 | transcriptional regulator, TetR family | chromosome | CDS | 4564290 | 717 | + | 0.728033 |
| NA | Francci3_3204 | transcriptional regulator, XRE family | chromosome | CDS | 3797843 | 498 | + | 0.678715 |
| NA | Francci3_1487 | two component transcriptional regulator, LuxR family | chromosome | CDS | 1779390 | 696 | - | 0.695402 |
| NA | Francci3_3528 | sigma-24 | chromosome | CDS | 4216474 | 552 | - | 0.679348 |
| NA | Francci3_0619 | transcriptional regulator, PadR-like family | chromosome | CDS | 703370 | 918 | + | 0.738562 |
| NA | Francci3_2444 | two component transcriptional regulator, winged helix family | chromosome | CDS | 2838805 | 666 | - | 0.672673 |
| NA | Francci3_2562 | transcriptional regulator, XRE family | chromosome | CDS | 3023154 | 1029 | + | 0.716229 |
| NA | Francci3_0630 | transcriptional regulator, MarR family | chromosome | CDS | 713983 | 585 | + | 0.731624 |
| NA | Francci3_3563 | protein of unknown function DUF448 | chromosome | CDS | 4262311 | 270 | - | 0.655556 |
| NA | Francci3_1680 | two component transcriptional regulator, LuxR family | chromosome | CDS | 2017552 | 690 | - | 0.668116 |
| NA | Francci3_3496 | cell envelope-related transcriptional attenuator | chromosome | CDS | 4167916 | 1461 | - | 0.715948 |
| NA | Francci3_3041 | transcriptional regulator, MarR family | chromosome | CDS | 3609408 | 423 | + | 0.730496 |
| NA | Francci3_3623 | serine/threonine protein kinase | chromosome | CDS | 4326261 | 2148 | + | 0.72486 |
| NA | Francci3_0704 | hypothetical protein | chromosome | CDS | 805071 | 1938 | - | 0.718266 |
| NA | Francci3_2623 | transcriptional regulator, TetR family | chromosome | CDS | 3097647 | 630 | - | 0.68254 |
| NA | Francci3_2472 | sigma-24 | chromosome | CDS | 2917272 | 597 | + | 0.631491 |
| NA | Francci3_3809 | DEAD/DEAH box helicase-like | chromosome | CDS | 4566464 | 1950 | + | 0.741026 |
| NA | Francci3_2008 | transcriptional regulator, GntR family | chromosome | CDS | 2359285 | 699 | - | 0.663805 |
| NA | Francci3_3728 | response regulator receiver protein | chromosome | CDS | 4463431 | 387 | - | 0.653747 |
| NA | Francci3_0895 | putative DNA-binding protein | chromosome | CDS | 1036671 | 1512 | - | 0.691799 |
| NA | Francci3_2769 | two component transcriptional regulator, LuxR family | chromosome | CDS | 3264953 | 921 | - | 0.745928 |
| NA | Francci3_3256 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 3855411 | 2487 | - | 0.703257 |
| NA | Francci3_3036 | transcriptional regulator, RpiR family | chromosome | CDS | 3602593 | 882 | - | 0.717687 |
| NA | Francci3_2082 | transcriptional regulator, TetR family | chromosome | CDS | 2449149 | 930 | - | 0.727957 |
| NA | Francci3_1136 | transcriptional regulator, XRE family | chromosome | CDS | 1352556 | 849 | - | 0.706714 |
| NA | Francci3_1264 | negative regulator of class I heat shock protein | chromosome | CDS | 1510354 | 1020 | + | 0.666667 |
| NA | Francci3_1300 | Heparinase II/III-like | chromosome | CDS | 1554173 | 2043 | - | 0.728341 |
| NA | Francci3_2772 | transcriptional regulator, XRE family | chromosome | CDS | 3269133 | 753 | + | 0.742364 |
| NA | Francci3_0817 | transcriptional regulator, TetR family | chromosome | CDS | 951754 | 999 | + | 0.706707 |
| NA | Francci3_4400 | helicase-like | chromosome | CDS | 5259593 | 1638 | - | 0.699023 |
| NA | Francci3_0925 | transcriptional regulator, LuxR family | chromosome | CDS | 1071161 | 894 | + | 0.733781 |
| NA | Francci3_2019 | putative transcriptional regulator | chromosome | CDS | 2371828 | 390 | + | 0.705128 |
| NA | Francci3_0716 | transcriptional regulator, TetR family | chromosome | CDS | 821884 | 870 | + | 0.71954 |
| NA | Francci3_0321 | two component transcriptional regulator, winged helix family | chromosome | CDS | 375329 | 1221 | - | 0.677314 |
| NA | Francci3_1380 | type III restriction enzyme, res subunit | chromosome | CDS | 1658205 | 1806 | + | 0.730897 |
| NA | Francci3_0503 | transcriptional regulator, MerR family | chromosome | CDS | 586881 | 183 | - | 0.693989 |
| NA | Francci3_2401 | two component transcriptional regulator, winged helix family | chromosome | CDS | 2780253 | 852 | - | 0.710094 |
| NA | Francci3_1729 | putative transcriptional regulator | chromosome | CDS | 2063500 | 450 | + | 0.688889 |
| NA | Francci3_4534 | serine/threonine protein kinase | chromosome | CDS | 5416410 | 2040 | + | 0.716176 |
| NA | Francci3_0089 | response regulator receiver protein | chromosome | CDS | 108070 | 516 | - | 0.736434 |
| NA | Francci3_0255 | transcriptional repressor, CopY family | chromosome | CDS | 294788 | 558 | - | 0.718638 |
| NA | Francci3_0765 | two component transcriptional regulator, LuxR family | chromosome | CDS | 890225 | 714 | + | 0.638655 |
| NA | Francci3_1836 | protein of unknown function DUF574 | chromosome | CDS | 2171511 | 804 | - | 0.708955 |
| NA | Francci3_2433 | serine/threonine protein kinase | chromosome | CDS | 2826848 | 1581 | - | 0.741303 |
| NA | Francci3_4132 | transcriptional regulator, XRE family | chromosome | CDS | 4932998 | 1251 | - | 0.679456 |
| NA | Francci3_2408 | SNF2-related | chromosome | CDS | 2791626 | 3492 | + | 0.708763 |
| NA | Francci3_0650 | serine/threonine protein kinase | chromosome | CDS | 742970 | 1647 | + | 0.733455 |
| NA | Francci3_3296 | putative transcriptional regulator | chromosome | CDS | 3902288 | 1437 | + | 0.694502 |
| NA | Francci3_2610 | transcriptional regulator-like | chromosome | CDS | 3080663 | 1086 | - | 0.743094 |
| NA | Francci3_3291 | transcriptional regulator, AbrB family | chromosome | CDS | 3898897 | 264 | + | 0.647727 |
| NA | Francci3_2734 | transcriptional regulator, XRE family | chromosome | CDS | 3222950 | 327 | + | 0.681957 |
| NA | Francci3_3205 | NusB antitermination factor | chromosome | CDS | 3798520 | 408 | - | 0.696078 |
| NA | Francci3_4326 | hypothetical protein | chromosome | CDS | 5168178 | 675 | + | 0.691852 |
| NA | Francci3_1767 | transcriptional regulator, LacI family | chromosome | CDS | 2101640 | 1113 | + | 0.71159 |
| NA | Francci3_1543 | transcriptional regulator, LuxR family | chromosome | CDS | 1852815 | 471 | - | 0.690021 |
| NA | Francci3_3827 | transcriptional regulator, MarR family | chromosome | CDS | 4588437 | 519 | - | 0.720617 |
| NA | Francci3_4540 | parB-like partition proteins | chromosome | CDS | 5424683 | 1002 | - | 0.705589 |
| NA | Francci3_2809 | hypothetical protein | chromosome | CDS | 3307596 | 750 | - | 0.730667 |
| NA | Francci3_3492 | Polyphosphate-glucose phosphotransferase | chromosome | CDS | 4163389 | 837 | + | 0.712067 |
| NA | Francci3_0443 | response regulator receiver protein | chromosome | CDS | 525625 | 753 | - | 0.710491 |
| NA | Francci3_0987 | transcriptional regulator, ArsR family | chromosome | CDS | 1167235 | 438 | - | 0.586758 |
| NA | Francci3_3505 | sigma 38 | chromosome | CDS | 4185210 | 1269 | - | 0.679275 |
| NA | Francci3_0610 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 693356 | 1050 | + | 0.670476 |
| NA | Francci3_3510 | SOS-response transcriptional repressor, LexA | chromosome | CDS | 4194229 | 771 | + | 0.702983 |
| NA | Francci3_2475 | transcriptional regulator, TetR family | chromosome | CDS | 2919584 | 1092 | + | 0.728938 |
| NA | Francci3_2882 | transcriptional regulator, XRE family | chromosome | CDS | 3398309 | 330 | + | 0.687879 |
| NA | Francci3_0712 | cell envelope-related transcriptional attenuator | chromosome | CDS | 815465 | 1722 | - | 0.699768 |
| NA | Francci3_4261 | two component transcriptional regulator, winged helix family | chromosome | CDS | 5083247 | 888 | - | 0.743243 |
| NA | Francci3_1879 | GCN5-related N-acetyltransferase | chromosome | CDS | 2213274 | 600 | + | 0.67 |
| NA | Francci3_0858 | transcriptional regulator, XRE family | chromosome | CDS | 1000133 | 1494 | - | 0.700803 |
| NA | Francci3_0424 | iron dependent repressor | chromosome | CDS | 504716 | 765 | - | 0.675817 |
| NA | Francci3_1139 | transcriptional regulator, XRE family | chromosome | CDS | 1354447 | 489 | - | 0.732106 |
| NA | Francci3_3194 | DNA-directed RNA polymerase, omega subunit | chromosome | CDS | 3786090 | 456 | - | 0.673246 |
| NA | Francci3_4003 | transcriptional regulator, BadM/Rrf2 family | chromosome | CDS | 4787364 | 534 | + | 0.705993 |
| NA | Francci3_1616 | hypothetical protein | chromosome | CDS | 1939055 | 546 | - | 0.688645 |
| NA | Francci3_2225 | transcriptional regulator, MarR family | chromosome | CDS | 2599119 | 489 | - | 0.701432 |
| NA | Francci3_1086 | helicase-like | chromosome | CDS | 1298075 | 2490 | + | 0.669879 |
| NA | Francci3_2952 | serine/threonine protein kinase | chromosome | CDS | 3489708 | 4221 | + | 0.715233 |
| NA | Francci3_3689 | sigma-24 | chromosome | CDS | 4425434 | 558 | - | 0.68638 |
| NA | Francci3_0217 | RNA binding S1 | chromosome | CDS | 253701 | 2595 | - | 0.723699 |
| NA | Francci3_1885 | transcriptional regulator, MerR family | chromosome | CDS | 2217010 | 342 | - | 0.687135 |
| NA | Francci3_2800 | hypothetical protein | chromosome | CDS | 3298238 | 825 | - | 0.62303 |
| NA | Francci3_0889 | transcriptional regulator, XRE family | chromosome | CDS | 1032806 | 246 | + | 0.650406 |
| NA | Francci3_2420 | transcriptional regulator, LysR family | chromosome | CDS | 2810741 | 870 | + | 0.744828 |
| NA | Francci3_0174 | serine phosphatase | chromosome | CDS | 204685 | 1173 | - | 0.710145 |
| NA | Francci3_2000 | hypothetical protein | chromosome | CDS | 2350115 | 606 | - | 0.684819 |
| NA | Francci3_0084 | two component transcriptional regulator, LuxR family | chromosome | CDS | 102901 | 720 | - | 0.7125 |
| NA | Francci3_1551 | transcriptional regulator, TetR family | chromosome | CDS | 1859559 | 684 | + | 0.695906 |
| NA | Francci3_3218 | regulatory protein GntR, HTH | chromosome | CDS | 3812472 | 1023 | + | 0.718475 |
| NA | Francci3_0330 | transcriptional regulator, MarR family | chromosome | CDS | 386624 | 426 | - | 0.659624 |
| NA | Francci3_3535 | phage shock protein A, PspA | chromosome | CDS | 4224026 | 840 | - | 0.710714 |
| NA | Francci3_2370 | two component transcriptional regulator, winged helix family | chromosome | CDS | 2746875 | 675 | - | 0.675556 |
| NA | Francci3_1938 | hydrogenase accessory protein HypB | chromosome | CDS | 2277083 | 852 | + | 0.700704 |
| NA | Francci3_0210 | transcriptional regulator, MarR family | chromosome | CDS | 248256 | 675 | - | 0.737778 |
| NA | Francci3_1495 | putative transcriptional regulator, TetR family | chromosome | CDS | 1789643 | 603 | - | 0.72471 |
| NA | Francci3_3925 | transcriptional regulator, MerR family | chromosome | CDS | 4694584 | 444 | - | 0.648649 |
| NA | Francci3_1556 | serine phosphatase | chromosome | CDS | 1865641 | 1092 | - | 0.695055 |
| NA | Francci3_4401 | conserved hypothetical protein | chromosome | CDS | 5261528 | 2514 | - | 0.750199 |
| NA | Francci3_3288 | two component transcriptional regulator, winged helix family | chromosome | CDS | 3896185 | 819 | - | 0.68254 |
| NA | Francci3_3779 | transcriptional regulator, AsnC family | chromosome | CDS | 4528874 | 489 | + | 0.676892 |
| NA | Francci3_3253 | two component transcriptional regulator, LuxR family | chromosome | CDS | 3852590 | 642 | + | 0.654206 |
| NA | Francci3_1170 | GCN5-related N-acetyltransferase | chromosome | CDS | 1398262 | 492 | - | 0.71748 |
| NA | Francci3_4151 | actinorhodin polyketide synthase bifunctional cyclase/dehydratase | chromosome | CDS | 4950607 | 948 | - | 0.693038 |
| NA | Francci3_1970 | transcriptional regulator, RpiR family | chromosome | CDS | 2311111 | 900 | - | 0.704444 |
| NA | Francci3_4539 | conserved hypothetical protein | chromosome | CDS | 5423786 | 639 | + | 0.657277 |
| NA | Francci3_2246 | ATP-dependent transcriptional regulator, MalT-like, LuxR family | chromosome | CDS | 2620630 | 2745 | + | 0.694353 |
| NA | Francci3_1949 | putative DNA-binding protein | chromosome | CDS | 2290594 | 426 | + | 0.615023 |
| NA | Francci3_3125 | transcriptional regulator, TetR family | chromosome | CDS | 3696671 | 609 | - | 0.715928 |
| NA | Francci3_4130 | hypothetical protein | chromosome | CDS | 4931451 | 891 | - | 0.601571 |
| NA | Francci3_1541 | GntR-like | chromosome | CDS | 1851745 | 705 | + | 0.726241 |
| NA | Francci3_3284 | two component transcriptional regulator, winged helix family | chromosome | CDS | 3889978 | 699 | - | 0.708154 |
| NA | Francci3_2136 | serine/threonine protein kinase | chromosome | CDS | 2503926 | 1983 | + | 0.705497 |
| NA | Francci3_1917 | regulatory protein GntR, HTH | chromosome | CDS | 2251026 | 954 | - | 0.715933 |
| NA | Francci3_2807 | aminotransferase, class I and II | chromosome | CDS | 3305572 | 1203 | + | 0.737323 |
| NA | Francci3_2281 | transcriptional regulator, XRE family | chromosome | CDS | 2661754 | 225 | + | 0.657778 |
| NA | Francci3_0774 | transcriptional regulator, XRE family | chromosome | CDS | 900843 | 504 | + | 0.678571 |
| NA | Francci3_0727 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 838950 | 2502 | - | 0.730615 |
| NA | Francci3_3427 | conserved hypothetical protein | chromosome | CDS | 4075126 | 2523 | + | 0.732858 |
| NA | Francci3_2979 | regulatory protein GntR, HTH | chromosome | CDS | 3521932 | 909 | + | 0.743674 |
| NA | Francci3_0308 | two component transcriptional regulator, winged helix family | chromosome | CDS | 354896 | 720 | + | 0.686111 |
| NA | Francci3_3410 | serine/threonine protein kinase | chromosome | CDS | 4050547 | 1125 | - | 0.706667 |
| NA | Francci3_0978 | two component transcriptional regulator, winged helix family | chromosome | CDS | 1156947 | 966 | - | 0.70911 |
| NA | Francci3_0253 | ROK | chromosome | CDS | 291680 | 1401 | - | 0.73733 |
| NA | Francci3_2274 | transcriptional regulator, AsnC family | chromosome | CDS | 2652725 | 411 | - | 0.695864 |
| NA | Francci3_2937 | putative transcriptional regulator, TetR family | chromosome | CDS | 3467230 | 582 | + | 0.728522 |
| NA | Francci3_1659 | putative transcriptional regulator | chromosome | CDS | 1993530 | 927 | + | 0.746494 |
| NA | Francci3_2291 | transcriptional regulator, MarR family | chromosome | CDS | 2671636 | 489 | - | 0.717791 |
| NA | Francci3_1791 | ROK | chromosome | CDS | 2127772 | 960 | - | 0.739583 |
| NA | Francci3_4255 | transcriptional regulator, CarD family | chromosome | CDS | 5077354 | 483 | - | 0.621118 |
| NA | Francci3_2228 | phage shock protein A, PspA | chromosome | CDS | 2601177 | 756 | + | 0.732804 |
| NA | Francci3_0666 | GCN5-related N-acetyltransferase | chromosome | CDS | 763203 | 561 | - | 0.737968 |
| NA | Francci3_1931 | transcriptional regulator, LysR family | chromosome | CDS | 2270488 | 1044 | + | 0.704981 |
| NA | Francci3_0531 | serine/threonine protein kinase | chromosome | CDS | 616702 | 1839 | + | 0.73627 |
| NA | Francci3_3081 | transcriptional regulator, XRE family | chromosome | CDS | 3651106 | 246 | - | 0.626016 |
| NA | Francci3_4061 | transcriptional regulator, TetR family | chromosome | CDS | 4858807 | 588 | + | 0.712585 |
| NA | Francci3_0682 | serine/threonine protein kinase | chromosome | CDS | 778301 | 2025 | - | 0.737778 |
| NA | Francci3_2856 | regulatory protein, LuxR | chromosome | CDS | 3365896 | 996 | - | 0.707831 |
| NA | Francci3_0471 | two component transcriptional regulator, winged helix family | chromosome | CDS | 551849 | 681 | + | 0.668135 |
| NA | Francci3_3722 | transcription termination factor Rho | chromosome | CDS | 4454488 | 2097 | - | 0.712446 |
| NA | Francci3_2005 | putative transcriptional regulator | chromosome | CDS | 2354953 | 405 | + | 0.674074 |
| NA | Francci3_0324 | response regulator receiver protein | chromosome | CDS | 380496 | 807 | - | 0.732342 |
| NA | Francci3_3293 | putative transcriptional regulator | chromosome | CDS | 3899962 | 360 | - | 0.663889 |
| NA | Francci3_4408 | GCN5-related N-acetyltransferase | chromosome | CDS | 5268952 | 1050 | - | 0.73619 |
| NA | Francci3_2865 | helicase-like | chromosome | CDS | 3377613 | 1125 | + | 0.756444 |
| NA | Francci3_0127 | transcriptional regulator, XRE family | chromosome | CDS | 157063 | 336 | + | 0.657738 |
| NA | Francci3_0359 | serine/threonine protein kinase | chromosome | CDS | 418487 | 1896 | - | 0.73365 |
| NA | Francci3_3833 | sigma-24 | chromosome | CDS | 4594750 | 885 | - | 0.723164 |
| NA | Francci3_2875 | serine/threonine protein kinase | chromosome | CDS | 3391556 | 1626 | + | 0.769988 |
| NA | Francci3_1025 | transcriptional regulator, XRE family | chromosome | CDS | 1218618 | 381 | - | 0.727034 |
| NA | Francci3_2452 | aminotransferase, class I and II | chromosome | CDS | 2859542 | 1326 | - | 0.69457 |
| NA | Francci3_4379 | putative transcriptional acitvator, Baf | chromosome | CDS | 5228704 | 753 | + | 0.664011 |
| NA | Francci3_2164 | transcriptional regulator, LacI family | chromosome | CDS | 2533578 | 1044 | - | 0.683908 |
| NA | Francci3_0743 | transcriptional regulator, TetR family | chromosome | CDS | 859794 | 693 | - | 0.688312 |
| NA | Francci3_3220 | putative transcriptional regulator | chromosome | CDS | 3815326 | 495 | - | 0.743434 |
| NA | Francci3_3926 | transcription-repair coupling factor | chromosome | CDS | 4695686 | 3627 | + | 0.711056 |
| NA | Francci3_1996 | transcriptional regulator, AraC family | chromosome | CDS | 2345473 | 1041 | - | 0.730067 |
| NA | Francci3_0303 | two component transcriptional regulator, LuxR family | chromosome | CDS | 350786 | 645 | - | 0.722481 |
| NA | Francci3_2673 | serine/threonine protein kinase | chromosome | CDS | 3155236 | 1623 | - | 0.711645 |
| NA | Francci3_3512 | transcriptional regulator, AraC family | chromosome | CDS | 4196764 | 879 | + | 0.721274 |
| NA | Francci3_2015 | transcriptional regulator, MarR family | chromosome | CDS | 2366944 | 618 | + | 0.73301 |
| NA | Francci3_0086 | transcriptional regulator, MarR family | chromosome | CDS | 105749 | 432 | + | 0.726852 |
| NA | Francci3_2248 | transcriptional regulator, TetR family | chromosome | CDS | 2624634 | 669 | - | 0.727952 |
| NA | Francci3_0807 | transcriptional regulator, XRE family | chromosome | CDS | 939242 | 510 | + | 0.713726 |
| NA | Francci3_3611 | putative transcriptional regulator, AsnC family | chromosome | CDS | 4312158 | 234 | - | 0.649573 |
| NA | Francci3_0482 | sigma-24 | chromosome | CDS | 564244 | 717 | - | 0.722455 |
| NA | Francci3_3768 | sigma-24 | chromosome | CDS | 4516898 | 810 | - | 0.683951 |
| NA | Francci3_0883 | transcriptional regulator, XRE family | chromosome | CDS | 1027856 | 351 | - | 0.663818 |
| NA | Francci3_0568 | NusG antitermination factor | chromosome | CDS | 658512 | 834 | + | 0.676259 |
| NA | Francci3_0573 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 662999 | 3426 | + | 0.666083 |
| NA | Francci3_2565 | transcriptional regulator, AbrB family | chromosome | CDS | 3025106 | 363 | - | 0.674931 |
| NA | Francci3_2717 | transcriptional regulator, ArsR family | chromosome | CDS | 3203107 | 336 | + | 0.702381 |
| NA | Francci3_0162 | transcriptional regulator, MerR family | chromosome | CDS | 191494 | 360 | - | 0.65 |
| NA | Francci3_1040 | Exonuclease | chromosome | CDS | 1236185 | 753 | - | 0.695883 |
| NA | Francci3_4090 | Twin-arginine translocation pathway signal | chromosome | CDS | 4898272 | 1512 | - | 0.691138 |
| NA | Francci3_1469 | transcriptional regulator, MerR family | chromosome | CDS | 1760981 | 777 | + | 0.724582 |
| NA | Francci3_2310 | transcriptional regulator, TetR family | chromosome | CDS | 2688413 | 597 | - | 0.735343 |
| NA | Francci3_2177 | transcriptional regulator, TetR family | chromosome | CDS | 2551822 | 582 | - | 0.699313 |
| NA | Francci3_3358 | hypothetical protein | chromosome | CDS | 3982682 | 2007 | + | 0.703538 |
| NA | Francci3_0828 | transcriptional regulator, TetR family | chromosome | CDS | 966418 | 678 | - | 0.716814 |
| NA | Francci3_3607 | DEAD/DEAH box helicase-like | chromosome | CDS | 4307473 | 2220 | - | 0.684685 |
| NA | Francci3_0426 | transcriptional regulator, ArsR family | chromosome | CDS | 508396 | 348 | + | 0.683908 |
| NA | Francci3_0148 | sigma-24 | chromosome | CDS | 176373 | 486 | - | 0.726337 |
| NA | Francci3_1532 | periplasmic binding protein/LacI transcriptional regulator | chromosome | CDS | 1837341 | 954 | - | 0.661426 |
| NA | Francci3_4095 | putative MarR-family transcriptional regulator | chromosome | CDS | 4903937 | 225 | + | 0.653333 |
| NA | Francci3_0711 | cell envelope-related transcriptional attenuator | chromosome | CDS | 813609 | 1581 | - | 0.711575 |
| NA | Francci3_3419 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 4063071 | 2697 | - | 0.718576 |
| NA | Francci3_1151 | serine phosphatase | chromosome | CDS | 1368953 | 2142 | + | 0.722689 |
| NA | Francci3_4209 | two component transcriptional regulator, LuxR family | chromosome | CDS | 5025556 | 606 | - | 0.579208 |
| NA | Francci3_0985 | transcriptional regulator, ArsR family | chromosome | CDS | 1163651 | 804 | - | 0.579602 |
| NA | Francci3_1471 | transcriptional regulator, MerR family | chromosome | CDS | 1762910 | 615 | + | 0.694309 |
| NA | Francci3_2258 | two component transcriptional regulator, LuxR family | chromosome | CDS | 2636770 | 675 | - | 0.688889 |
| NA | Francci3_4469 | cold-shock DNA-binding domain protein | chromosome | CDS | 5340877 | 204 | + | 0.642157 |
| NA | Francci3_2729 | helicase-like | chromosome | CDS | 3216956 | 3498 | - | 0.720698 |
| NA | Francci3_0908 | transcriptional regulator, XRE family | chromosome | CDS | 1052197 | 366 | + | 0.628415 |
| NA | Francci3_2779 | transcriptional regulator, MerR family | chromosome | CDS | 3273679 | 543 | - | 0.622468 |
| NA | Francci3_0104 | putative DNA-binding protein | chromosome | CDS | 125720 | 726 | - | 0.62259 |
| NA | Francci3_2594 | transcriptional regulator, TetR family | chromosome | CDS | 3060641 | 666 | - | 0.65015 |
| NA | Francci3_3453 | transcriptional regulator, MerR family | chromosome | CDS | 4113557 | 492 | + | 0.711382 |
| NA | Francci3_0825 | putative transcriptional regulator | chromosome | CDS | 963905 | 366 | - | 0.770492 |
| NA | Francci3_4027 | transcriptional regulator, LuxR family | chromosome | CDS | 4814233 | 828 | - | 0.624396 |
| NA | Francci3_2599 | transcriptional regulator, ArsR family | chromosome | CDS | 3067662 | 456 | - | 0.714912 |
| NA | Francci3_2791 | Silent information regulator protein Sir2 | chromosome | CDS | 3285712 | 948 | - | 0.725738 |
| NA | Francci3_3981 | serine/threonine protein kinase | chromosome | CDS | 4763864 | 2199 | + | 0.772624 |
| NA | Francci3_2622 | transcriptional regulator, AraC family | chromosome | CDS | 3097084 | 435 | - | 0.733333 |
| NA | Francci3_0923 | ATP-dependent transcriptional regulator, MalT-like, LuxR family | chromosome | CDS | 1065971 | 3708 | + | 0.74164 |
| NA | Francci3_3029 | two component transcriptional regulator, winged helix family | chromosome | CDS | 3595675 | 798 | + | 0.729323 |
| NA | Francci3_2702 | transcriptional regulator, XRE family | chromosome | CDS | 3186594 | 849 | + | 0.689046 |
| NA | Francci3_3622 | transcriptional regulator, IclR family | chromosome | CDS | 4325064 | 708 | + | 0.74435 |
| NA | Francci3_0435 | transcriptional regulator, MarR family | chromosome | CDS | 517764 | 453 | + | 0.701987 |
| NA | Francci3_2811 | serine/threonine protein kinase | chromosome | CDS | 3310105 | 2193 | + | 0.737346 |
| NA | Francci3_0240 | transcriptional regulator, TetR family | chromosome | CDS | 279183 | 846 | - | 0.708038 |
| NA | Francci3_4270 | transcriptional regulator, GntR family | chromosome | CDS | 5094958 | 765 | - | 0.648366 |
| NA | Francci3_2292 | transcriptional regulator, XRE family | chromosome | CDS | 2672333 | 279 | + | 0.749104 |
| NA | Francci3_0234 | two component transcriptional regulator, winged helix family | chromosome | CDS | 273729 | 729 | + | 0.711934 |
| NA | Francci3_0954 | signal transduction histidine kinase regulating citrate/malate metabolism | chromosome | CDS | 1127399 | 1128 | + | 0.68883 |
| NA | Francci3_3002 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 3556292 | 2508 | + | 0.754386 |
| NA | Francci3_0385 | hypothetical protein | chromosome | CDS | 458676 | 246 | + | 0.743902 |
| NA | Francci3_0432 | ROK | chromosome | CDS | 514542 | 1038 | - | 0.746628 |
| NA | Francci3_3651 | transcriptional regulator, MarR family | chromosome | CDS | 4361535 | 624 | - | 0.684295 |
| NA | Francci3_2398 | transcriptional regulator, TetR family | chromosome | CDS | 2777360 | 636 | - | 0.746855 |
| NA | Francci3_2012 | transcriptional regulator, IclR family | chromosome | CDS | 2363519 | 990 | + | 0.733333 |
| NA | Francci3_3653 | ROK | chromosome | CDS | 4371952 | 1125 | - | 0.734222 |
| NA | Francci3_0942 | transcriptional regulator, TetR family | chromosome | CDS | 1108680 | 627 | - | 0.709729 |
| NA | Francci3_1919 | transcriptional regulator, LysR family | chromosome | CDS | 2255541 | 945 | + | 0.748148 |
| NA | Francci3_3601 | Ribonuclease III | chromosome | CDS | 4303309 | 813 | - | 0.691267 |
| NA | Francci3_3038 | transcriptional regulator, LuxR family | chromosome | CDS | 3605027 | 2853 | - | 0.743778 |
| NA | Francci3_2609 | conserved hypothetical protein | chromosome | CDS | 3079630 | 978 | - | 0.756646 |
| NA | Francci3_1555 | transcriptional regulator, MerR family | chromosome | CDS | 1865066 | 582 | + | 0.704467 |
| NA | Francci3_1697 | transcriptional regulator, XRE family | chromosome | CDS | 2037866 | 516 | - | 0.734496 |
| NA | Francci3_3537 | transcriptional regulator, XRE family | chromosome | CDS | 4226035 | 312 | - | 0.717949 |
| NA | Francci3_2187 | hypothetical protein | chromosome | CDS | 2559895 | 525 | - | 0.697143 |
| NA | Francci3_2832 | transcriptional regulator, RpiR family | chromosome | CDS | 3335577 | 960 | + | 0.747917 |
| NA | Francci3_4185 | serine/threonine protein kinase | chromosome | CDS | 4993404 | 2160 | + | 0.733333 |
| NA | Francci3_4050 | serine phosphatase | chromosome | CDS | 4839111 | 2301 | + | 0.740548 |
| NA | Francci3_0260 | cold-shock DNA-binding domain protein | chromosome | CDS | 301688 | 204 | + | 0.632353 |
| NA | Francci3_3904 | GreA/GreB family elongation factor | chromosome | CDS | 4672177 | 483 | + | 0.697723 |
| NA | Francci3_1155 | two component transcriptional regulator, winged helix family | chromosome | CDS | 1375230 | 708 | + | 0.69209 |
| NA | Francci3_1536 | transcriptional regulator, LuxR family | chromosome | CDS | 1844171 | 1074 | + | 0.698324 |
| NA | Francci3_0574 | DNA-directed RNA polymerase, subunit beta-prime | chromosome | CDS | 666530 | 3888 | + | 0.680298 |
| NA | Francci3_0360 | serine/threonine protein kinase | chromosome | CDS | 420513 | 1527 | - | 0.733464 |
| NA | Francci3_4183 | sigma-24 | chromosome | CDS | 4987638 | 717 | - | 0.725244 |
| NA | Francci3_2908 | GCN5-related N-acetyltransferase | chromosome | CDS | 3423470 | 426 | + | 0.697183 |
| NA | Francci3_1243 | transcriptional regulator, TetR family | chromosome | CDS | 1487691 | 690 | - | 0.691304 |
| NA | Francci3_4425 | serine/threonine protein kinase | chromosome | CDS | 5290302 | 1842 | - | 0.721498 |
| NA | Francci3_1377 | (p)ppGpp synthetase I | chromosome | CDS | 1653600 | 2244 | + | 0.71836 |
| NA | Francci3_2751 | putative transcriptional regulator | chromosome | CDS | 3241988 | 396 | - | 0.651515 |
| NA | Francci3_1320 | nucleic acid binding, OB-fold, tRNA/helicase-type | chromosome | CDS | 1583494 | 387 | + | 0.702842 |
| NA | Francci3_1516 | transcriptional regulator, MerR family | chromosome | CDS | 1813201 | 606 | + | 0.719472 |
| NA | Francci3_0811 | transcriptional regulator, PadR-like family | chromosome | CDS | 942704 | 513 | + | 0.697856 |
| NA | Francci3_3884 | putative transcriptional regulator | chromosome | CDS | 4648239 | 351 | + | 0.692308 |
| NA | Francci3_3564 | NusA antitermination factor | chromosome | CDS | 4262588 | 1098 | - | 0.703097 |
| NA | Francci3_2971 | transcriptional regulator, MarR family | chromosome | CDS | 3515723 | 552 | + | 0.692029 |
| NA | Francci3_3395 | serine/threonine protein kinase with WD40 repeats | chromosome | CDS | 4025043 | 2190 | - | 0.719178 |
| NA | Francci3_3654 | hypothetical protein | chromosome | CDS | 4373693 | 1365 | + | 0.710623 |
| NA | Francci3_1643 | serine/threonine protein kinase | chromosome | CDS | 1975832 | 1605 | + | 0.743302 |
| NA | Francci3_1116 | transcriptional regulator, TetR family | chromosome | CDS | 1329563 | 630 | + | 0.68254 |
| NA | Francci3_4355 | transcriptional regulator, MerR family | chromosome | CDS | 5201120 | 606 | + | 0.744224 |
| NA | Francci3_3170 | transcriptional regulator, ArgR | chromosome | CDS | 3757213 | 705 | - | 0.723404 |
| NA | Francci3_3446 | transcriptional regulator, XRE family | chromosome | CDS | 4098094 | 867 | + | 0.650519 |
| NA | Francci3_1283 | sigma 38 | chromosome | CDS | 1534060 | 1230 | + | 0.660976 |
| NA | Francci3_0244 | putative sigma factor | chromosome | CDS | 283431 | 1206 | - | 0.742952 |
| NA | Francci3_2424 | serine/threonine protein kinase | chromosome | CDS | 2815348 | 2358 | + | 0.749364 |
| NA | Francci3_3032 | transcriptional regulator, BadM/Rrf2 family | chromosome | CDS | 3599336 | 432 | + | 0.706019 |
| NA | Francci3_3508 | Protein of unknown function DUF193 | chromosome | CDS | 4192675 | 546 | - | 0.705128 |
| NA | Francci3_4025 | transcriptional regulator, LuxR family | chromosome | CDS | 4811271 | 903 | - | 0.683278 |
| NA | Francci3_4435 | serine/threonine protein kinase | chromosome | CDS | 5301554 | 1629 | + | 0.735421 |
| NA | Francci3_2500 | transcriptional regulator, MarR family | chromosome | CDS | 2951434 | 537 | - | 0.752328 |
| NA | Francci3_4309 | two component transcriptional regulator, winged helix family | chromosome | CDS | 5147196 | 735 | - | 0.704762 |
| NA | Francci3_0460 | transcriptional regulator, XRE family | chromosome | CDS | 537943 | 978 | - | 0.724949 |
| NA | Francci3_2768 | transcriptional regulator, XRE family | chromosome | CDS | 3263621 | 957 | - | 0.739812 |
| NA | Francci3_3464 | transcriptional regulator, LysR family | chromosome | CDS | 4129095 | 951 | - | 0.71714 |
| NA | Francci3_2790 | GCN5-related N-acetyltransferase | chromosome | CDS | 3284996 | 714 | - | 0.714286 |
| NA | Francci3_2315 | hypothetical protein | chromosome | CDS | 2694044 | 516 | - | 0.647287 |
| NA | Francci3_2663 | urease accessory protein UreG | chromosome | CDS | 3143701 | 750 | + | 0.708 |
| NA | Francci3_2528 | sigma-24 | chromosome | CDS | 2989666 | 840 | + | 0.692857 |
| NA | Francci3_3980 | transcriptional regulator, TetR family | chromosome | CDS | 4762821 | 807 | + | 0.700124 |
| NA | Francci3_2538 | putative DNA-binding protein | chromosome | CDS | 3001759 | 1305 | - | 0.722605 |
| NA | Francci3_3249 | serine phosphatase | chromosome | CDS | 3847034 | 930 | - | 0.687097 |
| NA | Francci3_3696 | metal dependent phosphohydrolase | chromosome | CDS | 4432195 | 549 | - | 0.735883 |
| NA | Francci3_0683 | serine/threonine protein kinase | chromosome | CDS | 780419 | 2088 | - | 0.715038 |
|
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