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# Porphyromonas gingivalis W83, W83

>PG1697 type II restriction endonuclease, putative
MATFESSLKPRLIYVFAIADARHEGSLKIGETTLNDDVGSASTEPNSEVL
NKAAKARIDQYTKTAGIGYELLYTELTIYFSGGRVCSFNDKQVHSVLERS
GVKRKSFAGATEWYSCDLATVKRAISAIKEGKDSLGASEVTLSDNPIILR
PEQKEAIERTLKQFRKGNKMLWNAKMRFGKTLCALRVAKEMEAVRTIIIT
HRPVVDASWFEDFGKTFYDRPEWHYGSRSKGESFASLEKLASQGKKCVYF
ASMQDMRGSKDVGGKFDKNNEVFSTSWDLVIVDEAHEGTQTELGKAVLGQ
LMGKDTKALHLSGTPYNLFDQHKEEEVFTWDYVMEQQAKIDWEINHLGDT
NPYASLPAIHIYTYDLGRLISEYSDEEKAFNFREFFRTREDGSFVHEGDI
DRFLSLLCREDEEALYPYSNEHFRQIFRHTLWILPGVRAAKALSKKLSKH
PIFGLFKVANVAGDGDDEEEESRDALELVNQAIGKDPDETYTITLSCGRL
TTGVSIKPWTGVFMMAGSYSTSASGYMQTIFRVQTPYTHNGYMKTECYAF
DFAPDRTLRVLAEAAKVSYKAGKQSESDRKLLGDFLNFCPIISIEGSRMK
PYDVNTMLGQLKRAQIEKVVQDGFENGALYNDELLKLTEVELHDFDELKG
IIGKTKAMAKSGDIDINHQGLTHEQYEEKERLEKRKKKGLTPEEKKRLDE
LKAKGDQRREAISILRGISIRMPLMLYGAEMKDEDKELTIDNFANLVDEQ
SWQEFMPRGVTKAVFRRFKRYYDPDIFREAGKRIREMARMADKFTIEERI
GRIASIFSTFRNPDKETVLTPWRVVNMHLGDSIGGYCFMSEDFSTPIALP
RYIEHQGITNEVFHPKSIILEINSKSGLYPLYAAYNIYRTRVEEAREKYG
DVTRAFALQLWDRTLEENIFVVCKTPMARYITMRTLRGFRDVVTHTEHYP
DLIENITSQPDSVVNMLRSGKRFWKINNDENMKIDAIIGNPPYQVMNQGK
GNGSDPIYHKFFDLAMVLAPQGTLIHPARFLFNAGKTPKEWNEKMLSDKH
YRVVDYWPNSAEVFPTVDVKGGIATSYWNKKMILGPIGMFSAFDELHHIL
YKVEQTNPLPFSNLVAPRELYRITDELYQEHPDLNGRQSAGHKYSFGANI
FDVFPEVFFDEYPQGREEKMACIYGRANKQRCYKWCKRSYITHPENFAKY
KVIIPKTNGSGAIGEVLSTPIIGTPIMGYTDTFISIGAFDTRNEAEACLR
YVKTKFARTMLGILKATQDNPKETWRLVPLQDFTAESDIDWTQPVAEIDR
QLYRKYGLNESEIAFVEEKVRPMD
>PG0807 NusB family protein
MRLITFAGHYFSRIIIMINRALVRSRVLQQAYVYYHRDDADIQSAEKELL
NSLEQTYDLYLYYLLLVPELTRLHAEALEANKNKHLATEKDKNPNLRMVR
NRLAEKIESCRPLWVRAEQNALNWRSEEAFLRRLLKKIHLSETFTRYMRS
DATDDFEADRLFWNELMRDIILPDEELAEVMEEQSIFWDNQIQLIEKIET
EEAPDIEEVEQSVRQAVADGNYQTIRQENAPIEIVKEFVLKTIRRIEQDT
DPSAILLPAYKEKDDAVFGTTLLRNAIINGQEYRHIIRENLINWEVDRIA
DMDMLIMQLAIAELLHFPNIPVLVTINEYIDLSKLFSTPKSGTFVNGLLD
AVVKSLREKGKLLK
>PG1203 transcriptional regulator, putative
MNRIKEVLEEKGIKQTWLAEKLGKSFSIVNSYVCNRRQPSLDILFEIAKI
LEVDVRVLIGTKENRQKSK
>PG1318 RNA polymerase sigma-70 factor, ECF subfamily
MADKLLISEEELLEELRDPARRRMAFEKVVRLYNRKLYWQIRRMVLSHDD
TDDLLQNTFMKAWSALDGFRGEAKLSTWLYRIAMYESLNFLKKKKIEDDM
SISITDENSYLLDNLTGDVYFDGDEAEITFQKAILELPDKQRLVFNLRYY
DEMPYEKMAEITGTSEGALKASYHHAVKKLERFLSPDD
>PG2099 ATP-dependent RNA helicase, DEAD/DEAH box family
MRFDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTG
KTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMP
VSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPGRLISHLNLGSADLSHV
SYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAAS
ILRDPIEVEIAISRPPESIMQSAYICHEAQKLPILRKLFEQSAPKRTIIF
ASAKLKVRELTSTLRKMGFNVADMHSDLEQSQREQVMRDFKNGYVDVLVA
TDIVARGIDIDNIRVVINYDIPHDPEDYVHRIGRTARGTNGEGLAITFVS
EEEQSDFHKIETFLGKSVYKLPVDLEFGEVPAYEPAKRRPRRLGRSGEAR
SGRSETNKRQGKTASNGRRRGGTRQRR
>PG2125 transcriptional regulator, AraC family
MSLQDTWGGKMNTLGDRVLLCNDKRSLPAAAVATPFLFESMLFSVCTRGY
ARLLIDSREIEVKEGELLVVMPRKTIEVIESSCFRAFHLCLDKEILALSA
IRISGFISIINKLHSNEPFRPERMEKDFLTATLDLIRNALQNGGRHQEEI
VIYLISSLFLFLDDMIADEVEKDCKHTRSETICRDFLLLVSEHHKEQHTV
KFYADRLCLSSKHLALTIKTVMGQSASKVINSFIIQQAKSLLRYTDKTVQ
EIGYELNFSTQSFFGKYFKQHTGMSPGEYRSQEARNRQSEES
>PG2186 transcriptional regulator, putative
MNIIWQLGTCNIRQVLAEVPEPKPPYTTLASVFKNLERKHYIKPFREGKT
YHYRICISREEYATRTMHRMVDNYFTGSYKHLVQFFAAGSDISVKDLREV
IDMIEKGEESE
>PG1447 transcriptional regulator, AraC family
MSHLPIHRSSQLTDFGVYLKTIVSKTSASSDRYAFSHTDDYYFFGFIEGG
QCRLNIDFKECTFEKDSLVIIRPGQVHRIIDAYNLSANFLIIDSVLVNKE
EKRLLERHGRQKIQIFDISEQKQLLSLLAHRLSCTENSFSKPIIQRLTTV
IVGLVVKDVAGATETQSELQGNINRYKEIAWDFRELLESNIRTNRAPSFY
AERLNITVAYLNEAINAVWGTSVSRNIQDEIILQAKRQLVYTTTSVKEIA
QGLGFDDYSYFTRLFTKVAGVSPTLFRKNYHE
>PG0020 transcriptional regulator, MarR family
MKYKKLLFDLIDYLDAFESLHDGGSHEPEIKDFADFLSWRCGKKKKQEEE
VVSVTRERAAGAKNIARGVSLLHRYSRFYIKKALTESPLQTEDEYTYLVS
LMNGESMTKTELNNLNAMEKTSGAEVMRRLLKANLIEQRPDEEDRRSMRV
SITPEGRKVLVNLFPNLRLCAETLVSALSDEQLTAFDHLLWLLCECHNEM
FTGKHDAELTDLHAETCGLKQSAGGALSKRLYRR
>PG0780 hypothetical protein
MARKKRKTPGINGSSSADIAFMLLIFFLITTSMDTDMGLTRRLPPLSPNK
EKQPDVEINDRNIMRILVNKNDEIILLKKGATGSQDQIIPVKLSDLRRIT
KEFIANPTNRADLPEKEKREVVGLGTMELVTSSYAISIKNQIETSYQMYI
SVQNELIAAYNEVWDEFAQKYFHKPYKELTPSKQKAVLEAYPLHISEMPL
SNLK
>PG0055 conserved domain protein
MKKTLTMNLGGKVFHIDEDAYNLLEEYLHNLASHFDRENHTDCKTIEEFE
AYLSDMMVVRLHSEHAVISIGLIREVIEKINTGEHFSSNEDSTTAGYSAG
AGYSQKERETSGYRYMSGEAPKRKFYRDMDHAVLCGVCSGIAAYTRWNVN
AIRVIVVLMTILASPLFWMIIIGYLAVWMIAPPAITASQKLEMYGEPITV
ENIGKRVAADVDTGLHRRNASVLNTLGCVLKGLFVLVGIGLILAVVFGLF
GLILELFADGYVAHAPLTSDWISIPSWMILCATISVFIIVAVPVMAIVFR
HQGQGRNGIIPAGLKWLGLTIWLAAAVLLAVVFILITRELGLNFFLHRHS
V
>PG0928 response regulator
MEKNMRPYTVLWADDEIDLLKPHILFLEQKGYQVTPVLSGNDAIEAVQNN
DFDIVFLDENMPGIGGLDALQKIKELKPYTPVVMITKSEEEHIMTQAIGG
KIADYLIKPVNPNQLLLSLKKNLQQHSIISETTNTNYRQEFVQLGTQMSG
KLSFEEWKELYRRIVFWEIELEQADRQMGELLEMQKQEANRLFARFVTQN
YREWIAKPDTRPTMSPDLFKQKVFPLLDNGEKVFFILIDNFRQDQWESVK
SMLSEFYTFEEDMYLSILPTATQYARNAIFSGLMPLQIEKMFPDLWVDEE
SEEGKNLNEEPMIRTLIERYRKHYSFSYNKVYETKFGERLLGQIRSLSQN
QLNVIVLNFVDMMSHARTDSKMIRELASNEAAYRSLTKSWFKHSTTYNLF
RSIAEMGYKVVLTTDHGTIQVKNPVKVIGDRSTNTNLRYKIGKNLDYNPK
EVFEIKDPASVGLPHNNLSDKFIFTKEDDFFAYPNNYNYYVQYYRNTFQH
GGISLEEMLVPVITMQPK
>PG0543 transcriptional regulator, putative
MNRLREALKERGITQTELSTRLGKSFNMVNLYVANKHQPSIPTLFQIAEI
LDMDVRDLLVSNKQQNK
>PG0319 hypothetical protein
MNFQRVKSYFKKNRTMKRIVFVMIALLIGIGVATAQNAKKAVISSDNVEH
DFGTIKEADGSVTHTFVIKNTGDAPLVITRVVASCGCTTPQFSKEPIAPG
QTSKIDVTYNPAGRPGQFVKTIAVYSNGKDGTFTLRIKGVVE
>PG0004 transcriptional regulator, Sir2 family
MNKKRLVVLSGAGMSAESGISTFRDANGLWENYPVEDVASIDGFRRNPAL
VLKFYNARRRDYAGCKPNAGHIGLAEMEKEYDVRIITQNVDDLHERAGST
HVIHLHGELMKNRSVATDSVLYPVDPTNPDLHVGDLAPDGCQLRPFIVWF
GEAVPMIEPAIEEVTQADILVVIGTSLNVYPAAGLLNYAPRNCPIYLIDP
KPVRSTSRQDIRYIHAPATEGVRMLRQELRDIDR
>PG0162 RNA polymerase sigma-70 factor, ECF subfamily
MSSFHKLTDDELVSLYTEGCDEAFDVILSRYDAVVHTYIRFSVSDADLAE
DIFQDTFIKVIHTLRRGQYIPTGKFKAWLLRLAHNLVMDHYRRVRGEGAR
LQSFDDDDAAPVEKVADSNLTAEEQLIELATIEELEQYLSVLPEVQQEVV
RMRYWEDMSFREIADATGVSINTALGRMRYALINLRKMMGMSA
>PG0857 transcriptional regulator, putative
MQARTIIAQYVKEMRKKYKLTQVDLSEKAGVGLRFVRELEQGKTTLRLDK
VNKVFELFGSECGPVPMKREGDDV
>PG0243 hypothetical protein
MNPANDADIFDVLTHLERLFGDREKLSELTPNEAIEIFDRLSRINGMLIR
EASRQKEQTKQPVVLTEITPQEGKQEERPSPAGFDLQKIVSTLDFFRFRR
ELFQDDDKLMRDISAHLGLLSSAAEAMIYLHQRMQWEAEDPVVNDFAEVV
SDFFRRRN
>PG0826 transcriptional regulator, AraC family
MSHLPIHRSSQLTDFGVYLKTIVSKTSASSDRYAFSHTDDYYFFGFIEGG
QCRLNIDFKECTFEKDSLVIIRPGQVHRIIDAYNLSANFLIIDSVLVNKE
EKRLLERHGRQKIQIFDISEQKQLLSLLAHRLSCTENSFSKPIIQRLTTV
IVGLVVKDVAGATETQSELQGNINRYKEIAWDFRELLESNIRTNRAPSFY
AERLNITVAYLNEAINAVWGTSVSRNIQDEIILQAKRQLVYTTTSVKEIA
QGLGFDDYSYFTRLFTKVAGVSPTLFRKNYHE
>PG0823 conserved hypothetical protein
MERKISDEECPVRKSMQIFAGKWTLLIIFQINRRIIRYGELKRAIPGISE
KMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLPIIDEIAKFG
MENL
>PG0214 RNA polymerase sigma-70 factor, ECF subfamily
MEVEAFAHSVAPLAPRLKRVAYSILDDEEAAADVSQEALMRLWINRERLG
GYDSIEAVAVTTARRIALDMLRKEGRMEPLPDDLPFSDHAPTPQGVLEQS
ETMRLVEAAIEALPPLQRMTFRLKEIEGYESEVIARLVGVKVEAVYTNLS
RARRALRTALALQLKR
>PG2185 transporter, putative
MTYTLVLYMAVASIGLALFWIFERLMIHGNTHCRLRRAYYLGGFVSVVVL
PFLGYFLPSWPSLFIQNRSVGMEILRSIEIVLPEALVRTAGADAIPAVSP
LLRGLFLAWLLGIGVLLIRFGIRLRSLLCLICGAERAEIEGVPVYFAPRV
RMPFSFCRRIYLPTDLRSYPSVRNVLIHEQEHTRATHFVDLLIAEVACML
FWFNPFAWALKRDMQRNLEFLADRAVLLRGVSRREYQYELLGFTLEVAAG
PLCSSYNINDLRERIRMMNKTKSSRAAGARYLVALPLAALMLLSGKWLWA
GNAVSEVREVVATVASDPAPLSDAPDISLQQDEDPVCSELDTPPSFPGGM
SELMHFLSKNLKYPEQSAKNSIQGRVVVSFIVEKDGRLTNIQVEKSVAPE
LDAEAVRVISAMPKWSPGKQKDKKVRARVNQPVIFRLK
>PG1761 acetyltransferase, GNAT family
MTEKALDSKQTGYCLSTDHYRIRRALPSDYDSILALWEDARHTMLASDNP
QWQGAYPGETEAQEDIARGEAFLLDIAGTPLGVMAVNDQMPAEYGSLPWQ
TEGKAYTIHRLGVHSSLLRKGYAAAMLFSAETIAREQGGTCIRIDTYSPN
TAAQSLFRRLGYRQVCSFHMKQKPLPYIAFEKSLLKQLGSG
>PG1512 conserved domain protein
MEKPDYAERAYFEGVVNALIHRTYDFRGTEVHVEMYDDRLVISSPGGIYG
GGELEPMSDGSYISKRRNPILADIFSRLRYMERRGSGIKKIFEATKNLYG
YTEEKKPFFLVNKQNDFFLTIPNVNYRSESVTPHDTIHDKIALLLSFCQT
PRSREEIMEFVGLRNRNHFHKKYLRPLLEQEKIEMTIPEKPQSKNQKYRT
KETIK
>PG1007 transcriptional regulator, GntR family
MTAILQAQSIFLQISDTIKDRILSGEYSADERVPSVRELAEQMEVNPNTA
MRAVERLQMEGMIYNKRGLGYFVSPNAREEILASRRKKFVEEVVPALLSE
MKLLGIGLDTLQSEWDKQTENNS
>PG0276 conserved hypothetical protein
MKGTKSGVTFDYLGKLNTSFMAVEIREVLDKAELKKFVQFNIDLYRNNPY
HVPGLIDDEMMTLDKDRNPAFEFCEAIYFLAYREGRIVGRIAGMINHRAN
ETWNQNNARFGFVDFINDNEVVDALFHAVSEWARSKGMDMLQGPMGFTDM
DHEGMLIEGFDQLGTMATIYNYAYYPKQLERLGFIKDQDWKEYKIFVPTE
IPEKHRRISEIVRQKYGLKTLKFRTRKEVMPYAHRIFRTLNKAYSQLYGF
SELSEAQIDYYVNIYIPMVRLDFVTVIVREEDDEVIAFSITMPNLSRALK
KAKGSLWPFGFVHLLKALKGRPRVVDLYLIGVLPEYQNKGVNALIFDNMI
PIFQKNGVEYAESNPELETNMAVQMQWNYFERKHHKTRRAFIKRL
>PG0985 RNA polymerase sigma-70 factor, ECF subfamily
MNTIAFKEIFLPIRPSIRAVCHAFLRDDEEAEDATQEVYLRLWEARMRLD
GLDNPRAYAIRIARNYCLNLIRKASNSPYPTSLEAAEVQEVSETHGGEAD
LLLSEQIGRLRQWLRGVSELYRTVFAMSHFRRLSNGEIAERLGLTEGNVR
VILCRLRREAKEVMKDDA
>PG1127 transcriptional regulator, AsnC Family
MERLDKLDRRILSIISNNARMPFKDVAEECGVSRAAVHQRVQRMIEMGVI
TGSGYRINPKSLGFRTCTYVGVRLEKASMYKDVLPHLYNIPEIVECHYTT
GPYSLLIKLFAIDNDHLMDILNSTIQEIPGIVSTETLISLAEGFNRGIKI
PEGEQ
>PG1501 transcriptional regulator, tetR family
MSTKNTKELVLLEAFKLFSEKPYDKVTYTNLQENTGLSRGSVLHHTKSKS
ALFATVLSEFILASSIPERSFENGESLKGFIQRFIENCRIEQKTLQKRGI
ENINKSMLNLCSQTFYYCPIMAERYAEWMKNQQRTWVKIIRIAMDRKEIR
SDVDVEMVASLFHNLYLGFSFSGSTERGGYDLNFLEKEFGFIYSFLLKE
>PG0861 helicase, SNF2/RAD54 family
MLLRNTLIDNSSPELSMSSCLKQCFRLDWVNRVRIATGYWDVPGMALVIK
ELSAFLEREGTMLQILIGKDPYVYSSLLKNPKYQDASFPHDFIRTDIHNL
ELHEEYMQVIKLLLKHCESSKIQIRIYLRNAQGEIEFLHSKCYICSGVDD
SLGIIGSSNFTSRGLIGNAELNYLESDSRVVTAKPQKGSAAKGHSHWFDE
KWTIAEDWSQEFLEQVIKTAPIAQETMKSAKQEMQEQSLSPYELYIKLLQ
YKFSSLVDKDLNEILTGYLPSTFDAFEYQLDAVKQCYSIMQEHGGFMLSD
VVGLGKTVVGTLLVKHFLSMPEDDGRNKRVLIITPPAILETWRETIDLFD
VDKPESIAPSIDFVTMGSIGKLVDDIEDEDELNLEELDSGEFIEPLPCAN
YGLILIDESHRLRNNHTQMYQSLDTLIEQIVLREGAYPYIGLLSATPQNN
RPDDLKHQIYLFQRNHTDSTLRKANGGNLESFFADIAREYQSVIYSRYDE
GPTAEQIQQSRKLLNDLSSRVRDCVLQDILVRRTRTDIRKYYPETKLTFP
EISGPHSFEYRMSKSLAKLFARTMDCIAPKENFQFDSSTSLCYYRYRAIE
YLRDESTRKLYSGRNMDAERFSHQLARIMQIGLVKRIESSFSAFKVSLKN
LKRYTQNMVDMWEHDTIFICPQIDVNAELNPRKHWDSTRKLFSFEECAED
LRKKINKLNSSGSNEKGRNREYRREDFAPEYIDLLRQDLALIDQLDEQWS
IYSDDPKLDDFKRQLLPSLLSLERNPEQKLVIFTEAIDTVRAIERAIESV
DDRLSVLSITAKNRREREEDIRANFDANYKGEQRDDYQIIITTEVLAEGI
NLHRANSILNYDTPWNATRLMQRIGRVNRIGSQAPCVYVYNFMPSAEGDA
EINLVKKAYTKLQSFHTLFGEDSQIFSEEEEVVHHELKTQIEGAESALEQ
YLYELKTYKAQHPERYDYIARQSEGLELAVSETEGQALFVVRSPKCPAMF
VRYDALEDKCSMLSAPQMYEAFRSATFGAQASFALPKDWQARRDAAVLAV
NQALVKRNLNMKRSARATEAKAIIDQMKEMPMEAHSRKLLASARKLVDKG
NPDIIKRIIGIGHLLKEREGSLLPITQDEIDTIIHKEIEILVSGIAKKFG
QAEVFIGLSL
>PG1431 DNA-binding response regulator, LuxR family
MISIVLVDDHELYRVGLRAAISQMQGLAEIVGECSSCEELETFLKEQKEP
GLIILDIWLPDGNGVNIARKLKKLYPAVKIIILSSEVSEKTVNELLAIDV
EGYICKTAQINDIGNAIRTVTTGSHFYGKSVSKMILDICVSRSADQSHKK
SKKQQQQQNDSSELTQREKEVVQYLCDGYSAKETAEKMHLSYRTVETHRS
NILHKLGFTNAAELIRYAVKSGLVDWQ
>PG1052 transcriptional regulator, putative
MKKQKQGKLFYSISEVARMFDLPDSTLRFWEKEFPALKPRTSEGGTRRYT
AKDIEMVRLIHHLTKEKGLTLAGTKQALKNDYDGTTRREEVISRLKEIRQ
ELCDIRDAIDQWERKNMY
>PG2225 conserved hypothetical protein
MSELRLAIMSVLMSVEEADFLYLKEVTGATSGNISVQLDKLSTAGYIEIE
KGYNGKRPRTTCRATDAGREAFSAHFEALKSYLPTDSTH
>PG0128 conserved domain protein
MLSYHTDIPTDLPLLRQAVEAIRREESGGAVPDSDRPRVIYEARNRLYAI
RTAQGEQVVKSFRIPIAIQRVVYSFFRPSKAARSYRNAIRLGRCGIGTPR
PSGYAIEREKGLLCRSYYVCESMHDCRDIRLSMQGVEGGEALLRALAGFI
ARMHRAGIHHIDLSPGNVLYRTDEKGEYSFYLIDLNRMKFYDKPIVGRKA
YANFARLSFCPAVSKQLAEYYAEAQGLNTDGVVQGVQSESDRFFRSKVRK
YARKALVREQKRMSRSAFRRAYIRYRSVRLIRKLTGCTRLFRIENDLYTS
YLEVGDLRHTLKRAEGYSSPKNVQ
>PG1526 conserved hypothetical protein
MREITDIAVAESGDSDFKERLETKNAKSWLKSVSAFANGIGGTLYFGVED
RTRRIIGVQDIQLTISKITELIVARITPRPVFECIPLQQKGKDILAVRVD
SGKHTPFYYVHDHHHTAYIRMGDESVPATDYQLNELILKGRNETYDSQIT
EKLRTDYSFTLLEATYLHTLNQHMSDSDYVSFGLAVEDGRLTNAGLLFAD
QCPLPDSRVFCTRWNGLQRGSVHEDATDDAEYSGNLIYLLKSATEFIRRN
TRKGWTKTANGRVEKPDYAERAYFEGVVNALIHRTYDFRGTEVHVEMYDD
RLVISSPGGIYGGGELEPMSDGSYISKRRNPILADIFSRLRYMERRGSGI
KKIFEATKNLYGYTEEKKPFFLVNKQNDFFLTIPNVNYRSESVTTHDTIH
DTIHDTIHDTIHDKIALLLSFCQTPRSREEMMEFVGLRNRDHFQKKYLRP
LLEQEKIEMTIPEKPQSKNQKYRTKEVVK
>PG0720 DNA-binding response regulator
MKILIIEDEPDLRETIQKFLLGERYIVETAATMNEGLDKVLVYDYDCILL
DIMLPDGNGLTLLKELKKRGKTENLIIISAKDAIEDKVQGIELGADDYLT
KPFHLLELNVRIKGLIRRKTAHGAMEIKLGNVSLVPDRFEVAVKGHPLEL
KRKEYDILYHLMTRPNRLVDKAALAEAVWGDYIDQADNYDFVYAQIKNLR
KQMNDAGATIEIKSVYGFGYKLIEREEDT
>PG1535 transcriptional regulator, putative
MQNVGLRLKQERNRKGYSLQYVAASLNVSTTTVYRIEAGNKYLSMELFDR
YCELLELNPRDVFSNPAMEERDRIALEIGRRFIEIMELGVTIILPKIMNI
NIRPGPPDSKMKQ
>PG1450 conserved hypothetical protein
MERKISDEECPVRKSMQIFAGKWTLLIIFQINRRIIRYGELKRAIPGISE
KMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLPIIDEIAKFG
MENL
>PG1660 RNA polymerase sigma-70 factor, ECF subfamily
MEKQSDSYYISAVQAGDTESFAPLVERYSDMLYALLCRLLQDEEDAADLL
QDTFVKAFRHISRFDGRSSFSTWIYRIAYNEAIDHLRRHKAYVTDRVEEL
PDVPDEDLEPSGEDPELLQQALDSLPAADKALLLMFYSDDLSVRDIAEVT
GMSESNVKVKLHRLRTKLYKMMRK
>PG2161 transcriptional regulator, AraC family
MSIHICQPVSPKENPNGILNNSRPTTALSGLPELHTVGQGADLEIWTKDS
HALLFLLKGEPAVFVGPESGNSQLSGDNVVLLAANLRIRLRAEKGPATLI
CFYFHPTLHLCLGICPSSGNKKECRRRTEIVHISSLQRETMVNSWLHSVM
GYLSEMPTSSEIFELKLRELFCIFRSRYEKPLLDNFLSSFHCQNKGFRAF
VFRHHLECRSAEELAAKMNLSLSSFKRHFNQEFSCPPLKWMHEERAKHVY
TDLADPSLSLKAIAEKNLFSSVSYLCAFCRKMLGNTPLQLRKAMGQQPK
>PG0447 conserved hypothetical protein
MASRALSAISNPTNLLNQNNSDSPSPKTMSFNLIVDQGNSACKVAFVRNN
SIESISFLPGKAGQALSHLVAPHRFDKAIYSSVGLPDEEAEAIVRSCAAA
SLMMGTETPVPLRLQYDRRTLGADRLAAVVGAHSLYPNTELLVIDAGTAI
TYERVSAEGIYLGGNISPGLHLRFKALHLFTGRLPLIDPSGISPKIAEYG
SSTEEAITAGVIHGLAGEIDRYIDDLHAKEGRSAVILTGGDANYLARIIR
SGILIHPDLVLLGLNRILEYNV
>PG0173 transcriptional regulator, putative
MKKLMAAIRELESNLLDSAGCDLNQAMLLCVIADDSLSATEIASQIGVLP
AQNSKLLAAAEDRGWVMRRLGHDDKRKIYFNLTEEGRRQLEKVKALNIDV
PDLIRPILDSSEDKRRE
>PG2101 hypothetical protein
MSLKSNAMKYRSIILSFFLLMPVSNCFADMQGYCMPQSWVGKIGQKAKEK
VEKRVEEKVDKAMDKTLDKAEEEATRGQKRATTAPAPKTARKTISLQELE
QETDRKTHHIGNTGKSVGRATGKNGCEILFPVKQGTRREMTIYEANGKVS
GTIRQQVQSVTNTAKGMKITTAQEMYDKKGKQIFSSVANMWCDGDRFYVD
AQSLLNEQTLKMFKDIKYKVTGVDIAYPSRMSAGQSLPDAEVTITAEAAD
FPLPPITLRTIGRKVQGIERITTPAGTFECYKISYSIVMESMITVQMSAV
EWMSKDVGCVKSESYDKKGKLVGSTLLTKLE
>PG1648 RelA/SpoT family protein
MTIHDNTLFSADERSRFLSSYASLIRTLAPDRQLVKKVRSLLSRFTELGC
FDRDKNGMHGLLRNMEVARIASCEIGLGIEAIGALLFYRPAMKGLTRPEE
IAELMGEDVARLIDLLLKTSEIYMRNTAINTANFEHFLLSIAEDIRVVLL
IIADRSYLLRQAKDMVCAEERTALAAEVSYLYAPLAHRLGLYAIKSEMED
LCLKYTDRQTFDFIKRKLGETKRSRDAYIEAFIAPLRRRLDEALPNIPYE
MKGRTKSINSIRNKLRQQGIEFESIYDLFAIRIILDVPVKDEKAACWHVY
SIITDMYQPNPQRMKDWISIPKSNGYESLHVTVMGPQNRWVEVQIRSRRM
DEVAERGLAAHWKYKGIKSESGLDEFLTSVRETLEARDHSSDDSAETVKN
FKMNLFTDEIYAFTPTGELIKLPQGASVLDFAFAIHSRIGCQAVGANVNG
KNVPLKHKLENGDSVSIITSAQQTPKKDWLSYVVSSKARNKIKQQLRLQM
ESSIGVVKELLNRRLKNRKLPFEEAVFTRVVRRKGFKHLTDFYMEIAADR
LDVQEVLELYSHELEEEQRRDAGSGAARRSADTFVAHPPKEEEIVKGGKS
DVLVIDNNMTGVEYSFGKCCNPIYGDSVFGFVSNSGIKIHRTDCPNAPDM
FSRYGYRIIEARWSGKGSTGYEATLHVIGQDNLAIVTNITSVINKEPGVS
LRAYSINSKDNLFEGVFTVEVPDTSTLSILLRKIRATHGVKSAERH
>PG0086 ATP-dependent RNA helicase, DEAD/DEAH box family
MKTFEELGIAKPFLKAIAELGFEQPMPVQEEVIPYLLGEDIDLIALAQTG
TGKTAAFGLPLLQKIDLSGGRPQALVLCPTRELCLQIADDLNSYSKYLSD
VHILPVYGGTPIDAQIRALRRGVQIVVATPGRLLDLMRREAVSLSDIHTV
VLDEADEMLNMGFAEDLEQILADIPSERHLLLFSATMPKEISKIATSYMK
DPKEIVIGNKNEGNANIKHLYYMVSARHKYLALKRIADYYPNIYGIVFCR
TRKETQEIADQLIQDGYNADSLHGDLSQAQRDYVMQKFRVRNLQLLVATD
VAARGLDVNDLTHVIHFGLPDDVESYTHRSGRTARAGKTGLSIAICHVKE
KGKIKNIERTMQKQIERARIPSGAEICEKQLFNLADRIERVDIENTTAID
SVLNEVNKKLEWIEKDELIRRVMALEFNRMLDYYQRAEDVEEVVERKKDE
VSGDRKNRKRGAGEAEEGMTRLFINFGKMDQMFPNRLIELINRCIPGRVN
IGRIDLMPRFAFFDVDEFEAKNVVETLNRYEVDGRRIHVEYADTKKDYAG
GKKGGDKNFSARRKDFDGRRSENPTSRKNKGRKEKPTEGRFYDKFDSKQR
KRRK
>PG1237 transcriptional regulator, LuxR family
MNIITLKVAIVEPLPMIRAGLEALLKKITGYKIQFIDAPADNGWVDVISF
YCPDVVFMNPLVSGLTRNESDKACPQSRYVGLLTTPIDSNMLHNYDDTLS
VHATVEELKQLLERLYQKTLEPEESGEEQQTLTNREKEIVVGVVKGMTNK
EIAEELFLSTHTVITHRRNIAKKLQIHSPSGLTIYAIMNKLVNLDEIAH
>PG0856 hypothetical protein
MDENLRQLAESILTDLTQDAPIANTMLKAKVFASKKNDKDLLSWIEHELN
GYEENLPKYRLLDAGVKVDIHRGFQEVLGYNYPMGMVKDEKVRERLLHLP
IHGSISEVEELSTKSGEGTIHIDIPIEIWYHHMRHCINGDIQRAYQFATV
ASVKQIMVKIKSLLIDYFLKIDKGESLSFLSLIKKETPTMQIIAGIVNTG
SGNVTANGATIISGANISINKDNLPELQRILSCIEEIMKSLNSDDYKEIS
EELKTEIEKDSPSRNIIKRGLQAINGIASGIVSGVIANQVSPLVTSAIAL
L
>PG1063 transcriptional regulator, putative
MIDADAIKMRILSMMEQLGMTPSAFADRAGISRSALTHITSGRNKVTLDM
INKIMQGFDEWSAEWIIFGKGPQQSNKTAFENDLFSYSSVPEQELHTRTK
DNCGIQSPSGRLEPEIKIVQMPAKQIERITVFYTDGSYQEFRSNKE
>PG1827 RNA polymerase sigma-70 factor, ECF subfamily
MSLMPSIMLNTLFIRVSHLFDYLCVCGRRERIFQPLASTTTKKQLIMNSV
QFREKLLSLQDNMRNFALTLTANRDDAEDLLQDTTLRVLHNEDKFVDNVN
FKGWVLTVMRNIFINNYHKLVRSQTVIDPNSDPYNVPLLNEGGEDTPDGT
MTIKEITAAIASLNETLKQPFSMYVSGYKYNEISETLGIPLGTVKSRIFL
ARQELQQQLKDMR
>PG0254 N utilization substance protein A, putative
MAKKQETISMIESLAEFKELKNIDKETMINVLEDSFRNVLAKIFGSDDNF
DVIINPEKGDFEIWRTRQVVEDGAVEDESREVSLSDAHEIDPEAEVGEEV
TDSVNFASFGRRAILNLRQALSSKIMELQKENLFNTFTERIGQLISAEVY
QVWKREALLIDDDGNELLMPKSEQIPSDFFRKGETVHAVVERVENANNNP
KIIVSRTSGEFLKRLFELNVPEIADGLITIRCVARIPGERAKMAVESYDD
RIDPVGACVGMNGSRIRGIVRELRGENIDVTQYTTNTALFIQRALSPARI
SSIRLLEAEHKAEVFLRPEEVPLAIGKNASNIKLASGLTGYQIEVFRDID
DMDEEDIYLDEFNDEIDQWIIDLFKNIGCNTAKSVLSKNREDLIKETDLE
DSTIDYVLGVLSAEFADEDQVTDNQSTDSDDLDNFSAEDDLKQE
>PG0860 transcriptional regulator, putative
MGTKLPRKLEQKMQIVGEQIKLARLRRNLSIAQIAERATCSPLTVGRIEK
GSPTVAIGIYARVLYALQLEDDLLHLAGADELGRRLQDLSLINRRRASKK
G
>PG1040 transcriptional regulator, putative
MRKKRLDAIRRHILRSEISTQEELQTALLSEDIPVSQATLSRDLEILGIE
KSASPSGKKVYILPRDNRPPSSRGELRIGRTEGFIGPVDTGEMLLLNTAE
GHAARIASEIEELSAPEVADVFFGPTHIVVIGQKGTTRQALLCAIAPAIP
EVLR
>PG1181 transcriptional regulator, tetR family
MDARARILRAAREEFMVNGFRDASLRTIARESGVAVSNIYNYFEHKDSLF
RAVLQPLLDEFGRIMEGHNSEHNMDVYMLMPEKFREETTKEFMQFARQFR
AELKLLLLQSGGSSLEHFKDQVISRQIRSGENYLQLFKEKYPHANTEVSP
FFIRLGAAWWVNVFIEIITNEIHTEEEINQGLSEYIAFGTAGWRALMQI
>PG1240 transcriptional regulator, tetR family
MIDVARQLFAKIGVEKTTMNDIADAANKGRRTLYTYFKSKKDIYFAVVHK
ELDELYSSLETAALVSMPPTKKLMHFIYTHLEAIKEIVVRNGTLRADFFR
DIWKVETARKEFDLKEEHLICSILDEGVRLNAFSIPDTHITAKILLHSIK
GLEVPYISGHLRHAGTIAFERISENVEHLIFHGICLSPAVNSGEEEIGSE
SV
>PG0997 transcriptional regulator, putative
MQVASRVKARRLEMNLTQEGIALRAGMKLPTYRRFERTGEISFRGLLQIG
FALNALQDFALLFDQRLYQTLDEVLAEQQPKRKRGSKK
>PG1500 conserved domain protein
MERFNEVERGREISGRMLKGLEIRKKNLEAKLTRIADDIAERKDDTIDFK
RMGIDHLFVDESHKFKNLTFTTRHDRIAGLGNSEGSQRALNLLFAIRTIQ
ERTGKDLGATFLSGTTISNSLTELYLLFKYLRPQALEKQGIGTFDAWAAV
FARKSTDYEFSVTNEIIQKERFRTFIKVPELGAFYAEICDFRTAKDIGID
RPEKHEILHHIPPTPEQEAFIQKLMEFARTGNAELLGREKLSDREEKAKM
LIATDYARKMSLDMRMISPSYEDHIDNKASHCARLIHDYYRKYEREKGTQ
FVFSDLGTYKPDEWNVYSEIKRKLTDDYGIPASEIRFIQECKTEAAKKAM
IAGMNAGSIRVLFGSTEMLGTGVNAQQRAVAVHHLDTPWVPSALEQRDGR
AIRKGNEVARFHAGNKVDVIIYAVEKSLDSYKFNLLHNKQLFINQLKTNS
LGSRSIDEGGMDEATGMNFSEYVAVLSGNTDLLEKARLDKKVMAMESERK
NFLYERDTARSQLAKLQGAVEFHEKKIAEAGKDRTVFEERVKKNEDGTYQ
NPIRIDGVEDGRDIKTIARRLKEYEEKARTGGEHMPIGELYGFQLSVKSE
ASMKESFDFVDNRFFVKGCGSIYYTYNNGHLAEDPKLACMNFLNALEKIP
RVVESHRKELAATQAKIPTFETMVSAVWKKEEELQELKRQAAELDRKIAL
SLKKEDNSEVKPEETVAPDATIAVDAPLREELKRERSSERNHTDWKEIRE
DEKIKPCIKPGRW
>PG1688 greA, transcription elongation factor GreA
MAYNYITQEGYDKILAELAELESVQRPEISRQIAEARDKGDLSENAEYDA
AKEAQGILETKIAQLKGLIANARIIDESQVSTESVQILNKVTIKNVKTGV
VMAYTLVSDSEANLKENKISVNTPIAQGLMGKKIGDLVSIKVPSGLVEFE
IIDITL
>PG1774 mfd, transcription-repair coupling factor
MIKSPQPIDILSLFRRHNGVQALMKALDREKCVALDGLCGSSAALIVKLL
HESGRPVLCIASDMEEAGYLFSDLEQLGGEGSALFFPSSYKRAIKYGHTD
AAQQVLRAEALAALSMEGSCPLVVSYPEAVAERVVAGDILEKEMHSIRQG
DRLDRDFLRDLLLEWGFERTDYVYEPGQFAVRGSLLDVFSFSRELPVRID
FFDDEIESIRLFEVESQLSVGTLSEVVLMPDVAGDVRAEECLLGLFPKNT
IIVLPDRPFLEDRLQMVFTDAPLFDDGEGFESLVAMQERLTSPKELMDKL
NDFTTIATGSGRSGNYRIGFKTQPQPLFHKNFDLLIDQLEQWRDAGYRML
LATASDKQYERVEEILSERGSSSLLPKRVSLTLHEGFSDEALRIVLLTDH
QLFDRYHKYNLKSDKARSGKVTLSLKELNQFSQGDYIVHIDHGIGRFGGL
ITTDVGGKRQEVIKLIYRNNDIIFVNLHSLHKLSKYKGGDSDAQVELSRL
GTGAWQKLKERTKKRVKDIARDLIRLYAQRKEERGFAFSPDSYLQHELEA
SFLYEDTPDQERATAEVKADMESDRPMDRLICGDVGFGKTEVAVRAAFKA
ATDGKQVAILVPTTVLAYQHYQTFRDRLQNFPVRIEYISRARSAKDIKAI
LHDLAEGRIDIIIGTHRLVSNDIRFHDLGLLVIDEEQKFGVAVKEKLRKL
QVNVDTLTMSATPIPRTLQFSLMGARDLSNINTPPPNRYPVATELARFSP
DIVREAVNFEMSRNGQVFIVHNRIDNIEEIAGIVQREVPDARVAVGHGRM
SPTELERLILDFVHYEYDVLVATTIIENGIDVPNANTIIIDDAHRYGLSE
LHQLRGRVGRSNRKAFCYLLSPPLSVLSDDSRRRLQAIENFSDLGSGIRI
ALQDLDIRGAGNVLGAEQSGFIADLGYETYSKVFNEAVSELKADEFADLY
AESQEAIPSASRFVVETTVESDLELSFPEEYVPLDSERILLYRELDNLST
DEELDAFRRRMQDRFGKIPPEGEELIRVPRLRRLGRSLGIEKIVLRGDQM
SFHLVGKEDSPYYQSEVFGMLLEYIAAHTRRCEIRQSGGKRIVRLREVPD
VLTACELCTAISTRSSAERIEL
>PG0389 nusG, transcription antitermination protein NusG
MTNAEKKFYVLRAISGKENKVREYLEAEMKHSDLGNYLFQVLIPTEKVMT
QRAGKRVVKERPYLPGYVLVEAVLVGEVEHRLRSTPNVIGFLGDGRPAPL
HPSEVSRILGKVDQLDSEDEEYELSFMVGETVKVSDGAFAGFDAIVEEVN
PDKKKLKVMVKIFGRKTALELSYVQVEKE
>PG0270 oxyR, redox-sensitive transcriptional activator OxyR
MNIQQLEYIAALDKFRHFAKAADYCNVSQPTLSTMILKLEEELGAKLFDR
SRQPIEPTSIGALVVSQAKQILYDLNSITRIIEEEQQSLTGRLNIAVLPT
IAPYLLPRVFPIWKKELAGLEIHVSEMQTSRCLASLLSGEIDMAIIASKA
ETEGLEDDLLYYEEFLGYVSRCEPLFEQDVIRTTEVNPHRLWLLDEGHCF
RDQLVRFCQMKGLHERQTAYSGGSMEAFMRLVESGQGITFIPQLTVEQLS
PSQKELVRPFGMPRPVREVRLAVRQDYSRRKLREQLIGLLRSAVPSDMHK
LQTGQHLA
>PG0348 recG, ATP-dependent DNA helicase RecG
MDILSTKITYLTGVGPKRAEVLKEEIEVRTYLDLLHYFPFRYVDRSRFYA
IREIRSDMPYIQLRGVLRNFSEVGEGRRKRLTATFSDGTGSIELVWFKGI
KYIRDKLQEGRRYIVFGKPVFFASGYNIAHPEIDAEEKAEQVAGGLTPIY
HTTERMKSMGLGSKQLQQLLYVLLNQVSATLTETLPPYILSSYGFVSYQE
AIRQIHFPQGVAQLEAARTRLKFEELFYVQLHLIGSKLERKARFQGIVFA
QVGALFNTFYKEHLPFELTGAQKRVIREIRQDTLSGHQMNRLVQGDVGSG
KTLVALLSMLLALDNGCQACLMAPTEILARQHHHTLSELLRPLGIEVGLL
IGSCTARQRERLLPRLADGSLSIVVGTHALLEQGVAFRRLGMAVIDEQHR
FGVQQRARLWEKNLDTLPHILIMSATPIPRTLAMTLYGDLDISIIDELPP
GRKPIQTLHHFDNDMAPVFRFLRSQLAAGRQVYVVYPMIEGSETTDLKNL
EDGFELFSSIFPDEGVTMVHGKMKAKEKEARMADFVSGRSRILLATTVIE
VGVNVPNATVMVVENADRFGLSQLHQLRGRVGRGGEQSYCILITGTKTGE
DSRRRIQVMVETNDGFEIAEEDMRLRGFGDLEGTRQSGRQISLRIANPAR
DTELIALSRSIAEQLLERDPELRHPDNQMLALRLNKLFPKEEDWSVIS
>PG1763 rnc, ribonuclease III
MLSDILGFKPSRIAFYELAFRHSSCSLVDDEGYRLNNERLEFLGDSVLAT
AISGYLYRQHPHWDEGDMSQRRSAIVKRQINNVVAKKLRLDRFLIVRGEI
SQMSSDIMGNTLEALIGAIYLDKGYQAAEKFVLTRFIPVFHELEDSLTDT
TTNYKSLLLEWAQKHHLNLEFRLISEPKRAHGHFNYAVFVDGHRIGSGIG
MNKKEAHQNAAHDALEKLKRARDYRQKKKSSSSSEPE
>PG1911 rpoA, DNA-directed RNA polymerase, alpha subunit
MAILAFQKPENVLMMETSDSIAKFEFKPLEPGYGITIGNALRRILLSSLE
GFAITAIKIEGVEHEFATIPGVLEDVTNIILNLKQVRFKQIVPNADVEKA
TIVISNSEVFRAGDLNAQLSNFEVLNSNLVICHLDKSATLTMEFSINKGR
GYVSAEENRAEHNELSTIAIDSIYTPIRNVKYAVENFRVEQKTDYEKLLM
EVTTDGSIRPVDALREAAQILISHFSLFAENKIAIEYVDIVDTDEFDEDS
LHMRQLLKSKLSGLDLSVRALNCLNAAGVDTLGDLVSLSRSDLMKIRNFG
KKSLTELDELLATLNLSFGMDISKYKLDKD
>PG0394 rpoB, DNA-directed RNA polymerase, beta subunit
MTPTTNNKRINFASIKNPLFYPDFLEVQLKSFHDFLQLDTPPERRKKEGL
YKVFAENFPITDTRNNFVLEFLDYYIDPPKYSIEECLSRGLTYSVPLKAK
LKLYCTDPDHEDFATVIQDVFLGPIPYMTSSGTFVINGAERVIVSQLHRS
PGVFFGQSLHTNGTKLYSARIIPFKGSWIEFATDINNVMYAYIDRKKKLP
VTTLLRAIGFEADKDILDIFNLAEEVKVTKANLKKCIGRKLAARVINTYI
DDLSDEDTGEVVSMERITVVVDREVELTEDNIEAILNSNTQTILLHRNDS
NTSDYSIIFNTLQKDPCNSEKEALYYVYRQLRNAEPADDASAREVITNLF
FSDKRYDLGDVGRYRINKKLNLNIDPDIKVLTNEDIIEIIKYLIELVNSK
ASVDDIDHLSNRRVRTVGEQLYNQFGIGLARMARTVRDRMNVRDNEVFTP
IDLVNAKTISSVVNSFFGTNALSQFMDQTNPLAEITHKRRLSALGPGGLS
RERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVYAKISDLGFITT
PYREVKNGKVDFSDNGLKYYTAEEEEEKTVAQGNAPLDENGRFVRERVKA
RYESDFPLVTPDEVDLMDVSPTQIASIAAALIPFLEHDDANRALMGSNMM
RQAVPLLRPESPIVGTGIEGKLVKDSRTQIVAERGGEVVFVDASCIKIRY
DRTADEEFVSFDDAIVTYYLPKYRKTNQSTTIDLHPICSKGDRVEAGQIL
TEGYSTQGGELALGRNVQVAYMPWKGYNYEDAIVLNERMVREDFFTSVHV
DEYILEVRETKRGLEELTSDIPNVSEDATRDLDENGIVRIGAHIEPGDIL
IGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKATPSLRGVVIDTKL
FSKAAKKKSRTSTKEAVSKLDETYAKRQQQLHERLIDKLTELTKGKTCCG
VKDYLNVELIKAGSKFAKKDLEALDFNVIQLSDWTNDAHTNELIKAVAVN
YLKHSKEIEAELRRRKLDETIGDELPAGIVQMAKVYIAKKRKIQVGDKMA
GRHGNKGIVSKIVRQEDMPFLADGTPVDICLNPLGVPSRMNLGQIFEAVL
AWAGRKMNVKFATPIFDGASLNDMNEWTDKAGLPRDGKTYLYDGGTGERF
DQPATVGVTYFLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFG
EMEVWALEAFGASHILQEILTVKSDDVVGRSKAYEAIVKGDPMPTPGIPE
SLNVLLHELKGLGLSFSLD
>PG0395 rpoC, DNA-directed RNA polymerase, beta' subunit
MAFRKENKIKNNFSKIRITLASPEEILENSFGEVLKPETINYRTYKPERD
GLFCERIFGPVKDFECHCGKYKRIRYRGIVCDRCGVEVTEKKVRRERMGH
IHLVVPVAHIWYFRSLPNKIGYLLGLPTKKLDAIIYYERYVVIQPGVAEG
LSQLDLLSEEEYLDKLDEIERTHKGNQNLEDTNPDKFIAKIGAEAIYDLL
CRVDLDSISYELRDRANTDGSQQRKTEALKRLQVVESFRASKGVNRPEWM
VMKVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKA
PEVILRNEKRMLQEAVDSLFDNSRKSSAVKSDNNRPLKSLSDSLKGKQGR
FRQNLLGKRVDYSARSVIVVGPELKMHECGLPKDMAAELYKPFIIRKLIE
RGIVKTVKSAKKIVDRKEPVIWDILEYVMKGHPVLLNRAPTLHRLGIQAF
QPKLIEGKAIQLHPLSCTAFNADFDGDQMAVHLPLSNEAILEAQLLMLAS
HNILNPANGAPITVPSQDMVLGLYYITKLRPNTKGHGLIFYGPEEATIAY
NEGKVDIHAPIKVYVEDYENGELVRRMVETSVGRLMVNEYVPKKVGYVNE
VLGKKALRDIIGSVIKICGVATTAKFLDDIKNLGYYMAFKGGLSFNLADV
LIPDEKDQLIQEGYTAVEQIMQDYSMGFITFNERYNQIIDTWTHINGRLS
NVLIKQLSSDNDGFNSVFMMMDSGARGSKEQIRQLSGMRGLMAKPQKSGA
EGGQIIENPILSNFKEGLSVLEYFISTHGARKGLADTALKTADAGYLTRR
LVDVSHDVIITEEDCGTLRGLLTTELKQNEDVVASLYERILGRVSVHDII
HPTTGDIIVRAGEEIREQAAQIIEDSPIEAVEIRSVLTCESKKGVCAKCY
GRNLATNRMVQRGEVVGVIAAQSIGEPGTQLTLRTFHVGGIASNVATENS
LLSKYDGILEFEELRAVDVTDESHQVVVSRMTELRIADPNTGIILANHNI
PYGAKLFFRQGDAVKKGDKIIEWDPFNAVIVSEVAGTLSFEGVVENVTFK
MESDETTGLKEKIIIESKDKTMAPYARIIDENGEMLKNYSLPMGAHVVKD
DGDTVKVGEILVKIPRSVGKAGDITGGLPRVTELFEARNPSNPAIVSEID
GEIGFGKLKRGNREITVTSKLGEEKKYLIPLSKQLLVQENDFVRAGTPLS
DGAITPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEVIVRQMM
RKVEIVDPGDTLFLEQQVVDKFEVMEENDRIWGKKVVIDAGDSQVLKAGQ
IVTARKLRDENSMLKRKDLKIVKVRDAKSATASQILQGITRAALQTKSFM
SAASFQETTKVLNEAAICGKTDYLEGLKENVICGHLIPAGTGLRDYEKLV
VMHRDDYEKATAERKSFLSVPTAEPAMEEAPSE
>PG0594 rpoD, RNA polymerase sigma-70 factor
MRQLKISKSITNRESASLDKYLQEIGREDLISVEEEVELAQAIKRGDRKA
LEKLTRANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGF
KFISYAVWWIRQSILQALAEQSRIVRLPLNQVGTLNKIIKAQQKFEQENE
RRPSSAELAKELDIAEDKIADTMKVSGRHISVDAPFVEGEDNSLLDVLVN
EDTPNTDKSLINESLAVEIERALSTLTEREAEIVKLFFGIAGCQEMTLEE
IGDKFGLTRERVRQIKEKAIRRLRQSNKCKNLKGYLG
>PG1105 rpoN, RNA polymerase sigma-54 factor
MLKQTLAQRQQQNLSVQQIQQIKLLELPAIELEERIQKELEANPALEEGA
YDEEVAGSADGTEDNLMGDDTSDLSLGDYRTEEDIPEYKLREIQDRNSRR
EEIPFSAAVPSINDRLVEQLKFLPLTDRQQQLAPYIIGNIEEDGYLHRDL
EEILDDLAFRAGIEADKKEVEEVIGLVQSLDPPGICARDLKECLLLQLER
LPDTTARQTALHILTNHYDDFVSKRFEQLQEGASLSDSEMKEAFELIMQL
NPKPANGWGDDAEAAMNRVHPDFIVERMGDDLVVSLTRGRDIQPLRVSPV
YQEMMQDYQSSAKNRSRERKQTLLFVKQKVDQAQWFIEALRQRRETLQRT
MEAIVRLQDAYFRSGELADLKPMILKDVADPTGYDVSTISRVSNSKYVQT
DFGIFSLKHFFSDGTVNDKGEEVSTREVKRVLAEAIDSEDKRSPLNDTEL
ADVLAENGYRLARRTVAKYREQLGYPTARMRKEVV
>PG1089 rprY, DNA-binding response regulator RprY
MEEKTRIFLCEDDSNIGPLLKEFLETKDYIVDLSGDGEEGYSNYVKNSYD
ICILDIMMPRKDGIALAQEIRLIDPDIPIIFLSAKAKKEDIIEGFKIGAD
DYVTKPFSMEELAMRIEAVLRRCGGRSNKYMLYYRIGKYLFDTQKQTIAI
DDQVTRLTTKENELLALLCANANETLERNYALKTIWADDNYFNARSMDVY
VTKLRKLLKSDPEIEIKNIHGKGYKLVTPLKEKEKELCEELIKEV
>PG0141 spo0J, spoOJ protein
MKHTKKTLGRGLDSLLDAEVIGSSSISEVAISDIYPNPDQPRRTFEEESL
KELAASLRSIGLVQPITLLKKSAGDYMIISGERRWRAARMAGMTTLPAYI
KTEEDEHVMEMALIENIQREDLNAIEISLAYQKLIETYDLTQEELSTRVG
KKRTTISNYLRLLKLPGEIQIGLTQKKIDMGHARALLSIPDPEHQLALYA
EIIRQGLSVRAVESLAAHYREEGADSPAKQKKTKQSLPEEYRLLTGQLSR
FFRTKVKLDCDAKGKGKLTIPFASEEELERIMALLERIR
>PG1808 spoT, guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolase
MEQDASAKNPDIETENKGAISEEEALIQREYSLLIQDYLNSNHRRKVEKI
DKAFHLAKDAHAGAKRRSGEPYILHPIAVARIVCQEIGLGSTSICCALLH
DVVEDTEYTVEDMRDMFGDKVAQIVDGLTKISGEVFSNSSAQAENFRKLI
LTMNDDIRVILIKIADRLHNMRTLDSMLPAKQMKIAGETQYVYAPLAHRL
GLFAIKSELEDLSFKYEHPQEYEAIKEKIRITEQHRLEMFEHFAAPLKQR
FAGMDMSYEMKARVKSVYSIWKKMEKKGVPFEEIYDLFAVRIIFESSPTI
PDKNRCWEIYSAITDIYRNRPDRIRDWVSNPKSNGYQALHLTVMGPDGEW
VEVQIRSRRMDDIAEKGFAAHWKYKGDNVEEDSELEKWLSTIQEILENPN
PNALDFLDTIKLNLFSNEVMVFTPKGEIKRLPQGATALDFAYSLHSDLGD
HCIGAKVNHKLVPLSYVLNSGDQVEVLSSKSQQPTEEWLRYVTTARAKSK
VDTFLRRKRRELINRGEERVVSVIRTSESMVSAELLDRIAAYFGFLNRET
FFYAVGTGTVSLPESFKKLLQGEHSGNFLMRAIRSALKAGKSNKTSSPSG
KPAEKEDKKAYNTKKTYILQEDEFSRNYQIAECCKPIPGDDAFGFINDDN
TVVVHKRSCPIAMRLKSSFGNRILSTEWSLHSRTSFEAKLALKGIDSTGI
LTAVTQVISEDFNVGIKHIQLTAKDGIFEGQIHLLVHSSDDLLKICHQLR
QNKYIQSVGRIS
>PG1337 umuD, umuD protein
MIDLFQIDTGSSLLLPFADEGIRAGFPSPAQDYMDIAIDLNHELITHPYS
TFYGRVKGNSMEDAHVFDGDILVIDKSLEARDGDMAVCFLDGEFTLKTIR
IKSEEILLEPANPDYPTIHVSADNDFVIWGIVTYCIHKIRR
>PG1721 vacB, ribonuclease R
MTKEEMRNAILDIFQSNPQSVMNYKQVSHLMGVEAAPQKLMVNSLMEDMA
VDDILHEIERGRYRYNALGLIVIGTFERRFNGRNSFIPEGGGTPIFIAER
NSAHAMDGDKVKVQLFAKRRGRAPEAAVIEIIEQKQATFVGKIQINRDFA
FLVTEDRTLANDIFIPKDNLGNAKNGDKVIVRILEWPEQSKNPIGEVQAV
LGPAGDNDAEMNAILAEFGLPYVYPQEVEEAADRLDGKITEEELARREDF
RSILTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGGIID
QEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEA
KVLDYRICHSVIKSDRRFAYEEAQAVIETGEGDCKEAILKLNELAQRLRK
ERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRT
VARHIGEETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSN
VEVSKSINSLLDNIQNKPEENLISTVAIRSMAKAIYSTDNIGHYGLAFDF
YTHFTSPIRRYPDLMVHRLLTKYLSGGSSVDKNDYEEKCKHSSAMEQLAA
SAERASIKYKQVEFMSEHLGKVFDGVISGVTEWGLYVELKENMCEGLIPI
RCLDDDYYEYDDKNFCLIGRRYRHRYSLGDAITVRVAQANLDRKQLDFEP
VS