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2024-05-19 04:28:27

Gene list

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COG category: Transcription
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 72

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Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PG0997 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1056806 267 + 0.501873
NA PG0823 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS880958 315 + 0.406349
NA PG2101 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2210368 996 - 0.517068
NA PG0086 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; chromosome CDS100635 1815 - 0.50303
NA PG0543 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS595797 204 + 0.392157
NA PG2099 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; chromosome CDS2206739 1284 - 0.560748
NA PG2225 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2339580 270 + 0.548148
NA PG1535 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1614240 342 - 0.432749
NA PG0720 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS773066 690 - 0.476812
NA PG0004 transcriptional regulator, Sir2 familyRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS3108 705 + 0.523404
NA PG0214 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS251103 501 + 0.57485
NA PG0055 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS66956 1056 + 0.482008
NA PG0020 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS23522 705 + 0.503546
NA PG1240 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS1314543 609 - 0.47619
NA PG1501 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS1578590 600 - 0.358333
NA PG1063 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1131196 441 + 0.455782
NA PG1007 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS1066608 372 - 0.505376
NA PG0826 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS883361 849 + 0.408716
NA PG0319 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS353089 429 + 0.463869
NA PG2185 transporter, putativeSubName: Full=Transporter, putative; chromosome CDS2292023 1317 - 0.513288
NA PG1181 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS1263746 600 - 0.503333
NA PG1660 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS1743834 525 - 0.539048
NA PG1447 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS1531453 849 - 0.408716
NA PG1648 RelA/SpoT family proteinSubName: Full=RelA/SpoT family protein; chromosome CDS1727902 2241 + 0.528782
NA PG2125 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS2231466 879 - 0.508532
NA PG0928 response regulatorSubName: Full=Response regulator; chromosome CDS985152 1557 - 0.486834
NA PG0985 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS1047070 507 + 0.558185
NA PG0243 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS279066 477 - 0.469602
NA PG1512 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1587903 618 - 0.419094
NA PG1040 transcriptional regulator, putativeRecName: Full=Arginine repressor; chromosome CDS1107575 465 - 0.563441
NA PG1697 type II restriction endonuclease, putativeSubName: Full=Type II restriction endonuclease, putative; chromosome CDS1781160 3975 + 0.485031
NA PG0861 helicase, SNF2/RAD54 familySubName: Full=Helicase, SNF2/RAD54 family; chromosome CDS919387 3483 + 0.479759
NA PG1526 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1604022 1440 - 0.436806
NA PG1237 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; chromosome CDS1312369 600 + 0.461667
NA PG1052 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1119830 357 + 0.481793
NA PG1318 RNA polymerase sigma-70 factor, ECF subfamilyRecName: Full=RNA polymerase sigma factor; chromosome CDS1397292 567 - 0.47619
NA PG1761 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS1847224 576 + 0.538194
NA PG0780 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS832679 615 - 0.422764
NA PG1450 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1534390 315 - 0.406349
NA PG1500 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1576239 2292 + 0.522251
NA PG0276 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS307692 1188 - 0.478114
NA PG0128 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS149734 975 + 0.565128
NA PG0162 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS184595 582 - 0.517182
NA PG2186 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS2293374 336 - 0.479167
NA PG1127 transcriptional regulator, AsnC FamilySubName: Full=Transcriptional regulator, AsnC Family; chromosome CDS1203363 468 + 0.482906
NA PG0254 N utilization substance protein A, putativeSubName: Full=N utilization substance protein A, putative; chromosome CDS285252 1335 + 0.51985
NA PG0860 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS919028 306 + 0.545752
NA PG0856 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS916330 906 + 0.403974
NA PG0807 NusB family proteinSubName: Full=NusB family protein; chromosome CDS863720 1095 - 0.484018
NA PG1431 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS1516076 684 - 0.428363
NA PG0447 conserved hypothetical proteinRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS487418 819 + 0.500611
NA PG1827 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS1920154 642 + 0.44704
NA PG0173 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS194478 354 - 0.497175
NA PG0857 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS917459 225 + 0.493333
NA PG1203 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1283327 210 - 0.428571
NA PG2161 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS2266807 900 - 0.493333
greA PG1688 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1774306 471 - 0.460722
mfd PG1774 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1861269 3369 - 0.52152
nusG PG0389 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS422354 540 + 0.457407
oxyR PG0270 redox-sensitive transcriptional activator OxyRSubName: Full=Redox-sensitive transcriptional activator OxyR; chromosome CDS303005 927 + 0.492988
recG PG0348 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS382485 2097 + 0.541249
rnc PG1763 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; chromosome CDS1851089 714 - 0.455182
rpoA PG1911 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS2010860 993 - 0.431017
rpoB PG0394 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS425189 3810 + 0.448556
rpoC PG0395 DNA-directed RNA polymerase, beta' subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS429064 4302 + 0.465365
rpoD PG0594 RNA polymerase sigma-70 factorSubName: Full=RNA polymerase sigma-70 factor; chromosome CDS652188 864 + 0.506944
rpoN PG1105 RNA polymerase sigma-54 factorSubName: Full=RNA polymerase sigma-54 factor; chromosome CDS1175806 1458 - 0.503429
rprY PG1089 DNA-binding response regulator RprYSubName: Full=DNA-binding response regulator RprY; chromosome CDS1155613 738 - 0.434959
spo0J PG0141 spoOJ proteinSubName: Full=SpoOJ protein; chromosome CDS163968 870 - 0.573563
spoT PG1808 guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolaseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; chromosome CDS1903045 2289 - 0.489734
umuD PG1337 umuD proteinSubName: Full=UmuD protein; chromosome CDS1417953 426 + 0.448357
vacB PG1721 ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS1810424 2109 + 0.509246