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2024-04-27 13:15:24

Gene list

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COG category: Transcription
Organism: Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13)

Number of genes found: 104

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CYB_1974 RNA polymerase sigma-70 domain proteinchromosome CDS2073418 837 - 0.617682
NA CYB_0637 protein kinasechromosome CDS648160 1605 + 0.611215
NA CYB_0848 rrf2 family proteinchromosome CDS881472 441 - 0.591837
NA CYB_1343 DNA-binding response regulatorchromosome CDS1411475 744 - 0.619624
NA CYB_1001 putative cell envelope-related function transcriptional attenuatorchromosome CDS1040370 1470 + 0.616327
NA CYB_1178 RNA polymerase sigma-70 factor familychromosome CDS1215658 582 + 0.575601
NA CYB_1088 transcriptional regulator, MerR familychromosome CDS1125636 480 - 0.570833
NA CYB_2646 conserved hypothetical proteinchromosome CDS2733293 1536 - 0.610677
NA CYB_0232 sigma factor, putativechromosome CDS242791 462 - 0.573593
NA CYB_0466 protein kinasechromosome CDS471169 2241 + 0.59884
NA CYB_1129 conserved hypothetical proteinchromosome CDS1167545 291 - 0.580756
NA CYB_2856 DNA-binding response regulatorchromosome CDS2952637 744 + 0.577957
NA CYB_1864 serine/threonine protein kinasechromosome CDS1945812 1971 + 0.605277
NA CYB_1543 RelA/SpoT family proteinchromosome CDS1617330 2283 - 0.560228
NA CYB_2001 response regulatorchromosome CDS2106782 675 - 0.536296
NA CYB_0332 transcriptional regulator, LysR familychromosome CDS349223 966 + 0.615942
NA CYB_2723 DNA-binding response regulatorchromosome CDS2815070 690 - 0.602899
NA CYB_1321 acetyltransferase, GNAT familychromosome CDS1383698 504 - 0.619048
NA CYB_1316 transcriptional regulator, ArsR familychromosome CDS1378426 345 - 0.562319
NA CYB_2031 DNA-binding response regulatorchromosome CDS2133374 720 - 0.561111
NA CYB_0862 transcriptional regulator, TetR familychromosome CDS895382 714 + 0.564426
NA CYB_2330 peptidase, S24 (LexA) familychromosome CDS2437164 660 - 0.571212
NA CYB_2515 serine/threonine protein kinasechromosome CDS2609449 1644 - 0.611922
NA CYB_1709 acetyltransferase, GNAT familychromosome CDS1792357 525 + 0.55619
NA CYB_0949 serine/threonine protein kinasechromosome CDS984929 1890 + 0.622751
NA CYB_0859 transcriptional regulator, LuxR familychromosome CDS893302 264 + 0.5
NA CYB_0174 DNA-binding response regulatorchromosome CDS186762 693 - 0.582973
NA CYB_0266 conserved hypothetical proteinchromosome CDS281337 279 + 0.491039
NA CYB_2499 transcriptional regulator, putativechromosome CDS2593815 456 - 0.605263
NA CYB_0249 DNA-binding response regulator RpaAchromosome CDS264506 753 + 0.605578
NA CYB_1928 transcriptional regulator, ArsR familychromosome CDS2012261 366 + 0.571038
NA CYB_1056 HD domain proteinchromosome CDS1095279 618 + 0.584142
NA CYB_2844 hydrogenase accessory protein HypB, interruption-Cchromosome CDS2939367 621 + 0.582931
NA CYB_0503 acetyltransferase, GNAT familychromosome CDS514667 525 - 0.590476
NA CYB_1458 RNA polymerase sigma-70 factorchromosome CDS1534649 663 + 0.598793
NA CYB_1459 conserved hypothetical proteinchromosome CDS1535308 615 + 0.622764
NA CYB_0568 putative phycobilisome linker polypeptidechromosome CDS578667 534 - 0.604869
NA CYB_1639 sensor histidine kinase/response regulatorchromosome CDS1706804 1242 - 0.602254
NA CYB_1242 DNA-binding response regulatorchromosome CDS1291088 597 - 0.624791
NA CYB_1354 response regulatorchromosome CDS1422603 744 + 0.556452
NA CYB_2866 conserved hypothetical proteinchromosome CDS2965281 261 - 0.563218
NA CYB_1727 helicase, Snf2 familychromosome CDS1808499 2712 + 0.531342
NA CYB_0982 conserved hypothetical proteinchromosome CDS1017330 369 - 0.533875
NA CYB_0766 acetyltransferase, GNAT familychromosome CDS789172 513 - 0.573099
NA CYB_2689 DNA-binding response regulatorchromosome CDS2776914 810 - 0.591358
NA CYB_0402 transcriptional regulator PatBchromosome CDS415813 1653 - 0.552934
NA CYB_0582 RNA polymerase sigma factor, ECF familychromosome CDS588838 624 + 0.607372
NA CYB_1515 tetratricopeptide repeat/protein kinase domain proteinchromosome CDS1588914 3813 - 0.623918
NA CYB_0917 response regulatorchromosome CDS953731 1026 + 0.604289
NA CYB_1510 transcriptional activator, putative, Baf familychromosome CDS1582707 765 + 0.664052
NA CYB_2187 acetyltransferase, GNAT familychromosome CDS2292057 537 - 0.588454
NA CYB_2066 GAF/SpoIIE domain proteinchromosome CDS2163803 1446 + 0.591286
NA CYB_0522 serine/threonine protein kinasechromosome CDS536868 1899 - 0.622433
NA CYB_0726 GAF domain proteinchromosome CDS745337 1218 + 0.573892
NA CYB_2555 transcriptional regulator, LysR familychromosome CDS2660114 882 - 0.591837
NA CYB_1684 transcriptional regulator, BlaI/MecI/CopY familychromosome CDS1760072 435 + 0.62069
NA CYB_2139 fibronectin-binding proteinchromosome CDS2231650 1830 + 0.606557
NA CYB_2575 serine/threonine protein kinasechromosome CDS2678480 1353 + 0.597931
NA CYB_2734 RNA polymerase sigma-70 factor familychromosome CDS2827533 1101 + 0.580381
NA CYB_2296 transcriptional regulator, LysR familychromosome CDS2401039 951 + 0.587802
NA CYB_2520 transcriptional regulator, MarR familychromosome CDS2619379 498 + 0.572289
NA CYB_2078 transcriptional regulator, GntR familychromosome CDS2174263 1044 - 0.616858
NA CYB_0663 conserved domain proteinchromosome CDS677242 399 + 0.553885
NA CYB_2439 transcriptional activator TenA, putativechromosome CDS2542402 660 - 0.569697
NA CYB_1948 transcriptional regulator, LysR familychromosome CDS2040760 1029 + 0.526725
NA CYB_2501 DNA-binding response regulatorchromosome CDS2595567 702 + 0.623932
NA CYB_1701 putative helicasechromosome CDS1784956 2895 - 0.626252
NA CYB_1200 transcriptional regulator, MarR familychromosome CDS1244278 426 + 0.553991
NA CYB_1044 DNA-binding response regulator, LuxR familychromosome CDS1084594 690 + 0.584058
NA CYB_2561 DNA-binding response regulatorchromosome CDS2664997 741 + 0.607287
NA CYB_0662 RNA polymerase sigma factor, group 1chromosome CDS675947 1086 - 0.587477
NA CYB_1522 serine/threonine protein kinasechromosome CDS1601051 1662 + 0.605295
NA CYB_0634 hypothetical proteinchromosome CDS645805 192 - 0.578125
NA CYB_2489 RNA polymerase sigma factor, group 3chromosome CDS2585421 882 + 0.558957
NA CYB_1270 conserved hypothetical proteinchromosome CDS1328938 360 + 0.619444
NA CYB_0442 pspA/IM30 family proteinchromosome CDS450944 768 + 0.566406
NA CYB_1130 response regulatorchromosome CDS1167880 1020 - 0.563725
NA CYB_2553 DNA-binding response regulator, LuxR familychromosome CDS2659064 639 + 0.552426
NA CYB_2872 acetyltransferase, GNAT familychromosome CDS2969532 537 + 0.577281
NA CYB_1142 RNA polymerase sigma factorchromosome CDS1178803 960 - 0.582292
NA CYB_0128 pspA/IM30 family proteinchromosome CDS141133 759 + 0.591568
NA CYB_0340 aminotransferase, classes I and IIchromosome CDS358767 1290 - 0.616279
NA CYB_1194 WD-repeat/protein kinase domain proteinchromosome CDS1233137 2280 - 0.630263
NA CYB_1477 RNA polymerase sigma-70 factor familychromosome CDS1551150 963 + 0.564901
NA CYB_2552 exoribonuclease, VacB/RNB familychromosome CDS2656486 2061 - 0.612809
csx3 CYB_0599 CRISPR-associated protein, Csx3 familychromosome CDS608339 969 + 0.615067
hrcA CYB_2369 heat-inducible transcription repressor HrcAchromosome CDS2475197 1170 - 0.580342
mfd CYB_1207 transcription-repair coupling factorchromosome CDS1250050 3477 - 0.598217
nrdR CYB_1950 transcriptional regulator, NrdR familychromosome CDS2045913 543 + 0.546961
nusA CYB_2245 transcription termination factor NusAchromosome CDS2350829 1374 - 0.593159
nusB CYB_2099 transcription antitermination factor NusBchromosome CDS2193347 876 - 0.592466
nusG CYB_1220 transcription termination/antitermination factor NusGchromosome CDS1264105 666 + 0.59009
petA CYB_1621 apocytochrome Fchromosome CDS1693688 984 - 0.615854
recG CYB_2808 ATP-dependent DNA helicase RecGchromosome CDS2908804 2514 - 0.622514
rnc CYB_0755 ribonuclease IIIchromosome CDS777394 723 + 0.591978
rpoA CYB_1580 DNA-directed RNA polymerase, alpha subunitchromosome CDS1652911 1008 + 0.584325
rpoB CYB_2436 DNA-directed RNA polymerase, beta subunitchromosome CDS2532316 3420 + 0.607895
rpoC1 CYB_2437 DNA-directed RNA polymerase, gamma subunitchromosome CDS2535851 1884 + 0.597665
rpoC2 CYB_2438 DNA-directed RNA polymerase, beta'' subunitchromosome CDS2537788 3915 + 0.609962
rpoD CYB_2206 RNA polymerase sigma factor RpoDchromosome CDS2311744 1212 - 0.561881
scpB CYB_0114 segregation and condensation protein Bchromosome CDS128097 570 - 0.563158
sufR CYB_1406 iron-sulfur cluster biosynthesis transcriptional regulator SufRchromosome CDS1474726 717 + 0.606695
ureG CYB_0877 urease accessory protein UreGchromosome CDS905701 663 + 0.625943
zam CYB_2525 acetazolamide conferring resistance protein Zamchromosome CDS2626057 2301 - 0.607562