Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Synechococcus sp. JA-3-3Ab, JA-3-3Ab

>CYA_0201 DNA-binding response regulator
MSSPVRVLIADDHPLFRLGLKFALQAQGFEVVAEAETGSQAVEYCRRCPV
EVALLDVRMPDGDGILACQQIVELGLPVVVVMMTTFQEPGLIEAARRAGA
KGYLSKETDPAELARVIRQILSNPERDWLPARQELPKLTPRELCVLQLMK
EGLANKQIARRLGLSIETVKEYASAAYRKLDASDRVTALLKAQQLGIL
>CYA_2417 transcriptional regulator, LysR family
MADELPFTLDQLLIVQAIAQQGSFRRAAESLFVSQPAVSLQVQNLERQLG
VVLFDRGGRKVELTDAGQVLLHYSERILKLCREAVQALANLQEMGGGHLV
LGASQTVGTYVMPSLIAQYHRSYPQISVQLLVQSTRRIAQKLVEGRLDLA
IVGGEIPFDLQRHLKVIALAEDEYVLVGAPSCALDAPALVDLLTLPFITL
DPQSSTRQTIDRVLNRHGINPGQLNVRLELSSIEAIKNAVQAGLGVAFLS
MVAVGSDLEQGRLKKLAVEGLQIRRTLWLAFNPERYQSQAATRFREGLLS
CQDWLKTPPPHLQLLA
>CYA_0528 putative phycobilisome linker polypeptide
MELRQRDPQLLQNLLRAAYQQLLERQPYQHEKAGELEKIEQDFLRGQIGI
KRLVRQIGGSRLYRQLFFSAGCNTRCVEQAFKHFLGRAPASREEVAAYHN
ILVRQGFQAMVNAFIDSEEYRRTFGNDRLPHPRQRLSGYPPLAYLLTEQM
HRRHELAMQGSPRLQSLAVMEGGGIPQAVGPGRKSRL
>CYA_1243 RNA polymerase sigma factor
MAENLELQDAVGRFLKIIGRYSLLTAEEELHLAHQVQRMMALLEQRRQHE
SLEDWSRRLGIPLEELQQILRQGEAAKKRMVECNLRLVVSIAKRYRNRGL
PFLDLIQEGTIGLTRAVEKFDPTRGYKFSTYATWWIRQSVNRGIQNKGRL
IRLPAHMYEKVSQVKRRYRELSAEKGSRPAAEEVFDSLDIGDNYRELITR
HMAEIRSLNVGVGDEDGTELQHFIPDEDNDPIEHLNRVAHCEEVRALVSQ
LSEREQQVIVARYGLDGSKGLTLREIGEHIGLSRERVRQIERRALRKLRR
LQQEYSTPKAGRQLNSPS
>CYA_0738 hypothetical protein
MLRQIERILKLDMLLRSGQRKTAASLAEALEVSKLPDTRAMRRVRALSQS
LADPEDS
>CYA_0209 serine/threonine protein kinase
MFTASDPFLGRLLAQRYRLTHLLGQGGMGRVYLAQDLLFGGVEVAVKLLS
QPAMDEQARLRFEREAKACAALGQKSLHIVKVSDYGITADGVPFYVMEYL
NGQTLKDILATGSLPLERFFRLARQIGLGLKAAHEGILLEGQRIQVIHRD
LKPANVIVLADESLGELAKLVDFGIAKLLNTRESLSLTHAYLGTLAYSSP
EQLEGLPLDARSDIYSFGIMLYQMVSGQMPLQPTTESFPGWYQAHHKQRP
LPLEELGLPLALPAGLSDLILSCLAKDPAARPPTVANVLAELERIQARAQ
GSPRGASQAVALQFPAIPSGPLFPSAPPLATAGTLRLAPPTMASENRGSL
LWARLIPFLGGSLLGLALVSWGLGRLLQRPAAPVLSGSRPSPAATELEDE
RPGAEAQPDTAPEVLVPDILGSSAGQDEGATRRDPAPELEPYSGPVLRAF
PLQTSREVVRAALGSPSQQGRGARPNTVYDLYRLGSMNLSLTYDESSLAL
QQIEATVADDVPAPQAEGLLEDMLQAPLPPQLQRELQAVRENRSERVQFR
VGPWSGVVERTPQGHLYMAVWDPPPTVPVAQPRPAPRATPAAAGPRPGQT
LQELLRRARELRGD
>CYA_1047 acetyltransferase, GNAT family
MAEPEIPLPAGYRWRLGSAWDRPWVRRGLQATLQESFPEQRHWDHLEATL
DRLFDPPRTPCWWILKEATGEPVGGVWAGVSTDQATHRRVAYIFLLWVDP
AHRRRGLGKALMQQVERWGSQQQLAAITLQVYRHNQAALNFYRQAHFTVQ
GYWLYKPLGPAAASQEPEDYEVL
>CYA_0100 GAF/SpoIIE domain protein
MKPAILPAPPKPEPVAELGTDQQPMLYLLGGLAFALRSFNNLNQILELTA
FVASQLTAADGGALVLFNPNGTIQLDQLHCSDLDRREQIRAEMEQIAQAL
SAQEPILKTEGSLSVKIPALEHLLDERLRQSLGPDVRLFGTPLLIRSSVQ
GRLYVFSRQPGYQWNERRQQLLRLVADQAGVAIENERLTAALRRKMALEK
EMEIGSYIQTQLLPRQYPQVPGIRLAARCRVASKVGGDYYDFIKIPSERP
ENSRAAADEPVGSLAPSPEPSEDFRLAIVIGDVMGKGVPAGMLMSMTRAM
VRAEALNRHSPARVLQHLNRAMYSDLENSNRFISLFYSEYDPRSRRLCFS
NAAHNPTLWWRARSRDIQPLDTEGALIGLEEHSQYSESCVHLQPGDVVVY
YTDGYVEAANTRGERLETSGLMEAIQRAASRYESPEEILENLFEQMDAFR
GRQGSHPVVPGPPVDAGLLFQDEISLRPEPVDDTTLVVLKVLPDSEPT
>CYA_2195 transcriptional regulator, AbrB family
MLDIPPQPLTGKALLQKVEALSHLPRRETAKRCGYVTMTKTNKLRVNLNE
FYDAVLAAKGLSLSPTAKRDRRGREPTFRVSVHKNGQIIIGSAYTEKMNL
KPGDEFEIQLGYKHIHLKQVLNGQVMEDSTSNEEAAPKKTRSRRKKTTGA
>CYA_1033 DNA-binding response regulator
MQATLSMTSQLPEVQVKEAPPLLETLLVVDDEDAIRETVAVALEEQGYQV
LQAADGRQALELVHTAERLDLMILDLMLPGLNGLDLCRLLRREGNTIPIL
MLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRRQQSHASE
ATVLRYGDICMFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQ
LLERIWGSDFMGDSKTVDVHIRWLREKLELDPSNPEYLVTVRGFGYRFG
>CYA_2174 acetyltransferase, GNAT family
MSFWKGLFAAAGAATTKEPAQTAKADRRQETLAVGGETIVFSLDPNLDLY
ELEELCDAVGWSRRPIHKVRKALQHSFLVVSMWQQRGSYRRLIGFARATS
DHAFNATIWDVVVHPEFQGRGLGRRLMEKVIHELRAQDISNITLFADRDV
VSFYERLGFTPDPEGIKGMFWYPR
>CYA_1077 putative cell envelope-related function transcriptional attenuator
MSSFHYPPRPDRVRAARQQAIRQGILWLLLGFTAVLAGSAGAFLAVMLPR
PVIPTSLTPGEQEAFRPDALRAAALDRSLHILILGTDNPDPALPLSRERE
RLNTRTDTILLARFDPQARRITVLSIPRDTRVRLPSFGVTKINAANLVGG
PALTAQVVSTLLGGIPIDRYVRLNTDALEELIDAVGGVEVYVPEPMHYVD
HTQRLFINLEPGWQRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRAL
SRELLSPAVWPRIPKVLQVVRTHLDTNLTWEEVLSLAKFVLTSGGDRIDL
VLLPGRFSQPGEFSTSYWLPDPAAIRRVAVSHFGLEAEVARIPPQRLRIA
VQNATGKPGMARRMVQELVRQGYTQVFAVEDSPQVLPQTEILAQSGDREG
AKQVRAALGLGELRVESTGVLNSDITIRIGQDWAQQLTLDIDQAQSPARG
AQL
>CYA_2271 conserved hypothetical protein
MNSEYYSYDNYVLDQAEIDRLLDLLPASMRESVKILPASERQTVVIKGRR
QMPWERQMRLFIKPYEWRQFTPLQRAGLFLHKVGYYSRAASRQIDFYLAI
AALGGLSLIFEVVQQDPVGATVSGGLSGLALWQLRRDQTNDRRLLAADAY
AVDRLVLRGIPRLQAVEALGQALHVEARLEGRSGNDLLDMLRYQNLKRLA
QRPAEDIVLS
>CYA_2394 DNA-binding response regulator
MQPLHILLAEGNPHLRSLLGWHLQQARHRVWEAENIRQAKTLLQQQPVHL
LILDAELSSRAGLQLCRWAHRHCDVLILLLSQQGAEADIIAWLKAGADDY
LTKPLSLPLLDAHIQALTRRLRRSLPPTFLQYGDLKIDLVQRRVTLAGQG
IDLTPQEFSLLMVLIQADGDPLSRQELLERAWPDSTANPRTIDTHILSLR
KKLERDPHQPRLIHTVRQVGYSFGIEPPPPLQQPSRAAGATAPGSGPQQR
RRRAASSVG
>CYA_1490 RNA polymerase sigma-70 factor
MDAALSDISGQRWSVWVKDVPVRPEKLADVDLVLLCQQGSRPHREAFAEL
IRRHQAYVDKVLYHLAPDWPDRHDLAQEVWIRAYRHLKRLQEPAKFRSWL
GRIATNLFYDELRKRKRQQQPLSLDAPISMRDSEVEWELPSESPSPHEHL
TTCEFYEQLHQAVRDLPQVFRQTILLREIQGMAYEEIAEITGVSLGTVKS
RIARARARLQSTLKPYLDGE
>CYA_2292 acetyltransferase, GNAT family
MLWSRQGGPPTMPPLASLDLAAVFCCPVNRCQSSLPKVCFMSDPSLEPVI
TFSHQPVDNRNIRFSLERQDLDLDQLLVLLNRNAFWAQNRRREEMERAIA
HSHPVVSAWDGERLIGFGRATSDGVYRAVLWDIVVDHEYRRQGIGRKLVE
TLISHPHLQSVERIYLFTTHQRGFYERIGFVENPSTTLVLHGRPLDFLIP
AAEQEQV
>CYA_1125 transcriptional regulator, ArsR family
MVSWLAKVEEDLLCEQVREGFHALSDPIRLRALQLLRGRELCVCDLCEKL
QVSQSKLSFHLKTLRDAQLVNARQQGRWIYYSLNPPRFQLLQHFLDSLGQ
AAPSEVAVPCAEDP
>CYA_2337 conserved hypothetical protein
MAGADPLRRCVGCRQLFPRSQLWRLVRQYDTHQVLLDQGMGRSAYLCRRL
ECLRAARRKHQMSRVLKAAVPDSLWQLLEQQLLRDSEAQSPPETSAPGAS
ALDKT
>CYA_0061 RNA polymerase sigma-70 factor family
MKIEDDKAEGSLQERSDAEVFSALKAGQSQALAILYDRHAGLVYGIACKM
LGNSAEAEDLTQDIFLSLARSSFDPKRGSLRTYLGILARSRCLDRLRSWR
NRQRSLERGRVELQGDAAEDPALEQLAGAEQAVEVQTALAQLSEHQRQIL
KMAYYEGMSQTEIAKQLNLPLGTVKARARRGLLRLRELLGGAP
>CYA_0423 putative transcriptional regulator
MRLTTRATYSIRALLDLAMLGQVASVRAIAERQQIPAPYLEKLLIELRQA
GLVCSQRGAQGGYRLARAPRRIPISAILAAVGESLDPLPAERAGAQQEGS
ADGLDWVTEALWRRIAQRVEQVLEETTLEDLYFDARSWQAAQSQGGGFVV
>CYA_2635 RNA polymerase sigma factor, group 1
MVFSRPHPENIASSRQELDDLWLEAESASQDPAAEADLEPGASGLRLNED
AVDHYLNTIGRVPRIDHAEEIELSRKIQQKLLIDQARREWRQQWGQDPSD
EELAAALQIPVSTLRSRIRQGEQAQRKLINANLRLVVSVAKKYLNRGVPF
LDLIQEGNMGLIRATEKFNAERGFRFSTYAHWWIRQGITRCIANQARTIR
LPVHMVDKVRLLKRTNRELMKARGRRPTEAELAEALGIKVKKLRMIQQAA
ALPLSLDVPVGQEGESRLGDLLPDERQEQPFEEILVQSLRQDVRSAMQAL
KPIERQVLELRYGLDGQRARTLREVGDHFNLTRERIRQIERDALRKLRLG
HPSRALAQYIR
>CYA_1544 transcriptional regulator, MerR family
MRISQVAAVAGLPVRTVRYYESLGLLKPTVQRSESSYRLFHPAVLGRLAF
IRRCQSLGLSLEEIRQILQLYDRGEQPCPEIRQHLQEKLWQIEERMAELQ
TLKGQIESLLSDWRIPAEPTAQEDVICPILQKPEAGGDKVGRRYSTVTDL
ARLRG
>CYA_2069 conserved hypothetical protein
MLKCTTRHVHIFAGEVTADNHFVPRDDLLTLDVDPDNELVWNDAALQKVY
ARFEELVEEYRGRDLTEYNLRRIGSDLEHFIRSLLKQGEIAYNLQGRTPN
YSMGFPQIPAEEIVGQYIPKG
>CYA_2233 RNA polymerase sigma factor, ECF family
MGEQPPLRDWPSRSDGELMEAIRERQGAALGVLYDRYAGLVYGLALQILG
HVAEAEDLTQAVFVELWRKASYDPQRGSVSSFLCLLTRSRAIDRLRSQDS
SQRLLKHWQSLLAAENRAPAPFEQLSLEERRQAVQEALGQLPESQRQVLE
LIYYQGLSQADVARHLGIPPATVKARARQALCKLRGSLRALLEVWS
>CYA_2066 RNA polymerase sigma-70 domain protein
MAEPTDFELMRQIQLRDRRSHFLLKDRYQKRLLEIALSTLKQPHQAEEVV
RQVFEFCWKHAEAFDLQRDRSVALWLYELTAFQAQERLRRWSWLPAPASI
RVAPPWWPRRLLWGSLVGLGIYAVAITAAYWRLRWQGESVAIQRLYQEWQ
RQPQVRRTLLRDPSFRNPLLVQALWSPRAKQVLLLASEMPPAPPGTTYQL
WLESAGQRLESAGTFTVNAEGSLQWLSQPTHSQQPTRLWITLEPAGGSES
PTGAPLLQSNFWIPASQPEESKENLLN
>CYA_0905 acetyltransferase, GNAT family
MGVGGFPSTQVLSVQWRCRWGCRHFLLAASCLPLLCENSKDACNRCLNAL
FSSVLPSLVVYPVTLGDLEPVAEVLAQVFYPPLGLQRWLHPIHKLGIRED
LRLKLAARDPHYCCLAAAVGCEVVATAEISLRAMAHGKYPYLANLAVLPP
WRRRGIARQLLLSAEGVVQGWGYHQLYLHVVEDNLAARQLYAQLRYTPIQ
RTSQLWHWLGIPPQLLLCKWLP
>CYA_0322 putative helicase
MQPGSIVCCRHREWVVLPADSEEGVVLRPLTGTPEDAIHIHRQLMNLVGG
TLPFERIEPAFFPLPCADRVADAAAAHLLWQAARLILREGATPFRSLGRI
SIRPRTYQFVPLLMALRLDPVRLFIADDVGVGKTIEALLIARELLDRGEI
RRFCVLCPPYLCEQWARELAEKFHLEPVVIRSGTVGQLERQTPLGQSLYE
YFPVQVASIDFVKTERNRPQFLQFCPELIIADEVHGAAAASSGRAQQERH
ALLRAIAQAPNRHLILLTATPHSGIPEAFRSLLGLLRPEFEAWDFQDLTE
SQRLELARHFVQRTRRDIKETWQETACFPSREAEDETYDLSPRYRELFER
TYAFCAELVRTGQQMEQRRRRVRYWGALALLRCVMSSPAAALAALANRGA
GSREEEAEEAEESFSRWVFESAEERTDDELPLPALEAADQTLPDSDRRRL
RELARLAGQLRGVDQDTKLARAIELVKRLLKESFHPILWCRYVATAEYLA
DHLRQHLGSATQVACVTGRMGDEEREAKIAEMAVDQPRVLVATDCLSEGI
NLQEKLTAVIHYDLPWNPNRLEQREGRVDRYGQRAPRVKVIRFFGRDNPV
DGVVLKVLLNKVREIRRTLGTHVPVPEASESVTQAVLEALFLRQGSGSGE
RQLELDLGMAEVSRFHARWDRSAEQERRNRTRFAQRSLKPEEVQRELEAT
DAVLGDPQAVQQFFLAAAQRLGLAVIPDRQSGVFQVNLSREGTATLPEAI
RSALPQPKGGHWRISFVSPTPEGAEYVGRNHRLIAALAHFLLEKALDNPE
EAVVSRCGVVRTRAVAELTTLLLLRVRYLVEQPLAQPLLAEEVLVLGGVG
LERGAARWLETGAALQLLAKATPDANLPLAEKQELVQHVLDSLSPWPPTA
ENWGLGHPLQQGIREAICRRAGELADAHRRIRQAISQRVRGLEVKPQFPP
DLLGILVLQPLLSR
>CYA_0796 DNA-binding response regulator
MAPFAQAKSEPASARARILLVDDEPGLREAVQAYLEDSGFEVIPAANAQQ
ALQLLSTTQPQLIISDIMMPGMDGYQFLAQVRKLDPYSHLPVVFLTAKGM
TADRIQGYRAGVDAYLPKPFDPEELVAIVSNLIERSRAASPSEVVARELA
SIRALLSERTLPPTIPSQPPTPTPLPPPIKVELTPREQQVLEKVAEGLMN
KEIAKQLQTSVRNVEKYVTRLLNKTGTSSRTELVRYALTYGLIRL
>CYA_0162 conserved hypothetical protein
MTTTGKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLM
QFNNALLKAVGVDLDASDENGSRGRAPTYRVSVHKNGNLLIGAAYTKKMG
LKPGDQFEIKLGHHNIKLERID
>CYA_0337 putative transcriptional activator,Baf family
MSSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWL
AAVGSAPLPPRSPWVHCLELSQVPLRDPYPSLGLDRALALWAAGIRYGWP
CLVIDAGTALTLTGADAEGSLVGGAILPGLGLQAQALADHTARLPKVEWD
PGAPIPPRWARNTGAAIRSGILHTLLAGLRDFLADWRRRFPQGPLLVTGG
DGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKPSGAE
>CYA_1293 putative type III restriction-modification system, Res subunit
MARTTIDRLIINSPYEEPKKHWRYDRETRTFELVEGQRPAGYVVATPGSK
SFDDPGIFVEIPLVNQIRLRVKAWREAGYPGITSITRRLLAHWHDPEEFD
RRRFFFCQLEAVETLIWLTEAPAAERVGIEIPGDGGDFDRRCCKMATGTG
KTIVMAMVIAWHILNKVANPQDARFSKNVLVVAPGLTVKKRLAVLEPAGA
GNYYEAFDIVPSTLLDKLRQGRVLVRNWHALAWESEEQIKKRKSVDKRGA
KSDEAYTREVLGEMANAHNLLVINDEAHHAWRVNWEAEGKYLRQRDLKDS
AQEATVWVGGLDRLHRSRGILTCYDFSATPFAPSGKKSSEEALFGWIVSD
FGLNDAIESGLVKTPRVVVRDDAVPNAKTYKSRLYHIYNDPEVKDDLNRR
ANPEELLPDLVLNAYYLLGYDWRETWKAWKAADLPTPPVMITVCNRTETA
ARVKHAFESRRIPIDELCNSEGILHIDSKVLEEAEAKEEFTAVVEASDEA
DDGEEEDVPVECRLTKAEQAERLRKIVDTVGQVGQPGEKIQNVISVGMLS
EGWDAKTVTHIMGLRAFTSQLLCEQVVGRGLRRTSYEINPQTGLLEPEYV
NIFGVPFTFLPHEDSGDGPPPPPTPKTAVEPDPAKAEFEIRWPNVVRIER
LLQPTLTLDWSKVQPLELDAAQTPQVAELAPILEGKPDVNQISRIELEKL
AREFRTQRIIFETARNVFDQVRQSWRGSREILLAQLVRIVEQFIRSDRIL
ISPPLFYQDELRRRLIITLNLSRVVQHVCEAVRQENTEKLVPVFDRDHPI
RSTGQMRTWYTSKPCERTRKSHINVCVYDSTWEASDAFVLDNSSAVSAWA
KNDHLGFEVLYLYRGVVRKYRPDFLVRLANGDMLILETKGQDTELDRVKR
RYLDEWVQAVNAHGAFGRWRWKVARYPGEIRDTLLQS
>CYA_2351 transcriptional regulator, LuxR family
MGADYHSADLLSERELQVLELIAAGLTNQDIAERLEISKRTVDNHISNIL
SKTRTSNRVALVRWALQWGKVCLDQVNCCTLANDKIA
>CYA_1213 exoribonuclease, VacB/RNB family
MEKGTLVEFRHNNERVLAVVEGTEGKKNLLLGVASGQVHSVHPRQITFAL
NGNSSFTVSDIPGFWQAVQAKLDPESLALAWELVQEERRPLSLSEMAQLL
FSDDSPVSTYAAYRLLSEDYVYFKAKGEGYEPRTPAQVKEILHQIAVTQQ
RQQEQAEFEARLKAAVAQPGQKYTWSPAERARLEVLERLALQGAAASIRS
HEDLSHNLTPSDRERVSQLLQLMGFPDTPQGAFDALVALGLWSRHENLAL
RLTGIPTQFPKEVERYAQTLLGGPPPFLDLPLRRDLTHLHTYTIDDASTR
DIDDALSVEFESDDEVKLWIHIADPSCWVQWGDPLDLEARKRGTSVYLPE
RVIPMFPSELSTGPMSLVQGEVRPALSFGIRLGSDGAVRDYEICLSQIRV
NYRLTYDDADEMLELGAEAQLTAIARAARWRYAWRLAQGAIPIGLPEQDI
KVIDEIPHLRVIEDTPARQMVAEMMVLAGEVAARFARQNGIPVPYRLQPA
PELPPPEVLDLYPQGPVRSFAIMRCLSRAEVATQPGRHTGLGLDAYCQVT
SPIRRYLDLVAHYQIKAFLRGDPLPLTEAKVQQLLLGIEPGTAEANQVER
KSKRYWSIEYLRQRPGQIWQALVLGYLREEENLVMAMLDEIAFRVPVRLE
RQVPLGAWIELEVLQADPRADVIELREVGQNAL
>CYA_1843 transcriptional regulator PatB
MAYQISGNCIGCNACVDSCPTKAIVVQDGEYWINPLLCNDCEGFFPEPQC
VSLCPGSAPQPYEAMKGRNRTVTARIRSSPPLFLNGHSQAFASSIVVWEA
CNFLSQFQSLNLQKQGDNQVCYQKSVGHNQGSLTLTLCLDGIPQSAPIDV
RTACLHLIFAAYAAGLNSPWKESFVFTDSQLESYLGWDKRKDLSKMTRLH
LFMTWIEQLCRIQVSIDWPDQGRVKGFSVPAGPLWRLLKMHRHFQKDEQG
CNHLVGLTWAIQPGEWTRYFLNRQGCRQGQAFYQYSSLPLSLLQAVMSHW
QHHEGAMRLLLWLLFKVRMGRQQRLTVPTLMRVAYGEERLQEAYLNLQER
KRLVRTFESDLEVLNHYGLKPEFDPLTYPSSIQPLWARLEAVPEDADEAL
NFWIEDANNGGLLTAAGPRGKWGLLMQARIQRFHLPSDWHRQAVQEARSP
TRESGSRQRRRAKSAPAATASDLPCHPEDPKDFSSGKALRGADISAARQQ
KGISQRELAQRLGRSQSWVRDVENGRLQISLNDRQRLIKALYLDPRQQQV
>CYA_2333 protein kinase domain/TPR repeat protein
MDDKVKPGAILRGRYEILGLLGQGGFGVTYKAVDRDTFNTPCVVKRLRPL
STDPYTLATARKLLEREAKVLNRLNNYDRVPRLLAHFEQDQEFYLVEEFI
AGHDLTHELVDGKPLSEPEVVQLLWEVLEILRHVHAHQILHRDIKPANLM
RRDFDGKLVLIDFGAVKEVGRLVSHAPGQTQVATVIGSVGYIAPEQLGGK
PQPCSDIYSVGVLAIQALTGRPPTKIRDDPRTGQLLWRDLVPVSKELAEI
VDRMICPRWQERFQSAAEVMEALRPLLPTPPEGVAPALSQLSVDQLLAMR
LVTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAG
AVEDFTRAIQLGGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWA
LAYYSRGNAYRQLDQPQQAIEDYSRALELNPEEVRAYFNRGVVRGQLGDA
QGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIEDYTQALQLDPG
HPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAEL
YLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAG
ALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDV
GARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDW
AAACEDFSQALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADF
TALIQEQPQASQGFALRAAVHLVLGDEEAALADLDRAIGCNRDWGLADAA
LAYRQRGDLHRQANRLQQAIADYTQVLALNPQERHALLWRALLWDQAGEI
ERALADYTQLLQLEPDPQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLER
DPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQGYEGRLWEEETHSLG
SS
>CYA_1992 peptidase, S24 (LexA) family
MSTSSDSSFADRLRQVIGDEAIYAFGRRAGISDTALRSYLKGSVPGIDKA
VKIAQVGGVSLSWLITGEGSPRLEAGDAKTEYVYVPLVDVVASAGAGALV
REESIESVLAFERNWLRAHLKGNPDGLSLIRVQGDSMSPTLEDGDWIFVE
RQKELGGEGIYVFQRDGELWVKRLQRLSGSRVKVISDNPRFPSFVVDCAD
PVNGLILIGRYRGRLSFD
>CYA_0042 WD domain, G-beta repeat protein
MVGQTLAGRYQILEELGSSGQTYLAQDGHCPEQSWVVIRRWQPRSPKGEE
PSAARQRFQQAMALRERLGSHDAIPRLLAYFEEEGGFYWVEEWIQGQTLE
QALRQTTEQGQLWSEVEVRAFLQDVLQTLAFLQGEGVSHGNLRPSCLLCR
QSDGRWMVLGLGQAMASAGSGLEASSAGGDLDALGLLALQALSGIPTHKL
FRDPLTGELRWHDLAPTSAPFAAFLDGLVGCDPRQRFASAAAALAALQAL
SLAEGVSPGAEILPDPVAVDPWQEPTTPPRSPVSLRARFWIPPLWAGSSL
AALLVLFGVAAWQLAANLSRWGEKAVVPRDSVPPAGTMANLGSAGPNSFS
FTEQPPNPSKTGSPALDLADWAKSLRLKAKLEGPAAITALAISPDGNLLV
AGGDDGVIRFWDPQAGQLLQSWTGHEGSIETLAISPDGTFLVSGGADKTV
RVWDLAALGDPALRSGEGVPRLQLQGHTDLINSVAISPDGRWIASGSADR
TIRLWQAEDGQLVRTIDSAAYPVTQGAGITAVAFAPSGLAEEGSSPWILV
AANGNPAVYLWDPRSGALLKTLEADYPIEQVLLSPDGRHLLAASASGIWI
WNVGTGSRERTLPQPLSGLATLALSPDGRLLASSTDHRAQQIKLWDLRSG
KELRTLGGQTWMVSALLFGPDGQTLLSGGADGAIRIWGPEHPASEAEKGT
QP
>CYA_2037 RNA polymerase sigma-70 factor family
MSNYEPELNDILLDGDLLDPAEEAEVDLAESEFAEEEPARRSTDLVRLYL
QEIGRVPLLGRDEEVALAQRVQDYMKLLDVRLRLQKELGREPTLAEWAAR
ANQYPEWANLTPEKLQQIQRIGKRAKEHMIKANLRLVVSVAKKYQNRGLE
LLDLIQEGTLGLERAVEKFDPKKGYRFSTYAYWWIRQGITRAIATQSRTI
RLPVHITEKLNKIKKAQRKLSQEKGRTPTIEDIASELEMTVPQVRELLVR
VPRSVSLETKVGKDKDTELGDLLETDDISPEETMMREALHRDLQQLLADL
TSRERDVIRMRFGLGDGRTYSLAEIGRALDLSRERVRQIEAKALQKLRQP
KRRNRVRDYLEAIS
>CYA_2348 transcriptional regulator, TetR family
MARPSSRQRLLNAARDLFVRQGITQTTTRQIADLAGVHEVTLFRHFGSKQ
GLLLAVFAELGVFSGIADLPLPADPTTFRGSELQAILLRYVQTCFQALAN
NPELVRSLVGEAGFYSEEHRRALRAGFLQAQEQLAHYLQQLPSPELQAVD
SGCLHAAAGVLHLMILGTAVLAVTAGLPAGDGDQPSSDPADKGTYDNNSG
TPPLLYACVKLWMAALRGMKET
>CYA_2441 transcriptional regulator, MarR family
MAQLEKQAFLERWREILAPYSLGYRLRLLSQLVRRKFQAYLEPFGLTASH
WVVLCCLWEEDGIPTSTICERLQQLGGTMTGVLDGMEKRELIRRQRDPKD
RRIWRVYLTPAGEKLKEILPPLIWELREQTYGCLSLEERATLSQLVDRLI
AHLSEESEAAVVAEPHHRLSY
>CYA_2298 response regulator
MSTLLAEDDTLYRQHVHSLLMQHLPQFGPVYMASNGREALELYRQHRPNF
LLLDIRMPEMSGIEVARQVWSEQPSTRIIFWSHFADEVYVRELHKIVPPQ
TVYGYLLKNCSDEKLVSAIQAVVQDEQCVIDREVRGVDSRSQNKITGLSD
AEYEVLIDIALGLTDQAIAARRFLSRRGVTNRLRNLYDKLEVSNDQIESE
EWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSRYRLEPLD
>CYA_0373 serine/threonine protein kinase
MNQRLIGQLIGNRYRLTHHISEGGYGNVFEAVDTQLNDEPVAVKLLRPPP
PDMEPEYYQQLQQRFLDEARVSALLGEHPNIVQVRSYGLYQNQPYLVMEY
LKAKPYTGQGLDYVLAREGPLHPERVVNLALQICSALHHAHNFHMDLGKH
SIRGVIHRDIKPSNIFVQKGPDGKERVKLLDFGISKLMGETSRGLTQTGY
FLGTMVYASPEQMRGEKLDGRSDIYSLGVVLYELLTGALPFEPETDTLQG
WYHVHNFQKPRPFQDHPLPHPIPEALEKVVLRCLEKDPALRPATMEELAQ
QLRAVYGDKIPPPPQKAPLQRIPAGFGQQATQQSRAAPVSEAEEEELQRA
VRLIEAGEYKMAVHLLNKLIQSAPNEARYYLYRGLAHQRQGHWGLAQMDY
QGVLRLEPGNPSAEQGLREVEQQVGQEQVSPHQKPTLPTSGKPRQRKGLA
LGWLLANWAAAGIGYLGLGAAAPLLAALGSLQGAVAGAGLGLGMGLLQWA
VLRRQVSWRWVAATLLATALGWVAADTLEAGMATFAFDPRDPWLQNALQA
MASPLRGLLVGLGVGGLQGILLSRHGKVAWAWVLAAGVEGGGAALLIHWL
LAGSALSRWLLLLAGLLAHTRPLSALVLANLNWRRIPAVQNCQQAKQQAA
>CYA_1226 rrf2 family protein
MELSCKSEYALLALLELAQHYHDGRVLQIKEIAAHQSIPDRYLEQLLATL
RRQGLVRSQRGAKGGYSLARPPWQISLLDIIQAIEGEDLTRPRDLPSGDL
SPERQVLWQAWQDAQAAAVGILQKTTLQDLCDRQAQQQQARLMYYI
>CYA_2028 conserved domain protein
MANPFKLLQSREPSLGADFWLALPLAGILFGVGGEWVTGQVLSRPRPQVQ
PLAIRSQQEAILTLDILSIQAEIRRRRGYTKVEVTTTNPHLRKLEFEFPE
LDPDRVAAQIAQELGLTPDQVQRLTCYSLD
>CYA_1502 hypothetical protein
MGSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQA
GVDLTLDYRTYRLAALLSEHFPMGELLGVSLKWQDDASAVDKLQTEVARS
WREQIEQRYLVPRHK
>CYA_0984 transcriptional regulator, LysR family
MRLELLQAFLNVVETGSFLAAARLSGLTQSAISRQIQALEEAVGAPLLHR
KSPVALTVAGERLLPHARRICQEWQRAQESIREWLQGQQTELCIAGIHSL
IAHQLPPVLQQFCREYPEVQLRVTALGSDRALKVLRDGLVDVALVMENPL
MTRGAELVVEPLYSEPIQVLMPANHPLSRYERIPWKVLAEYPQAVFKDGY
AMRSLVGSHLARQGLPLKAALELNTLDAFRGVVRQGQLIALLPESALVDC
CADPDLQVRPTEPPLLRRQVVMVTTSDRYRIPPIRRFLQLAAQLIRQSEV
EPASGADPHWPSAGLLSVL
>CYA_0548 acetyltransferase, GNAT family
MEIRPATPEDAPVLFDLICALAEYEKLSHLVTGSAELLRQHLFGPEAFVS
ALLAEVEGQAVGFALYFRNFSTFLTRPGIYLEDLFVLPEFRGRGIGRALL
ARVAQEAVAKGYGRLEWMVLDWNQPALEFYRRLGAKPHPEWILHRVVGAD
LEALARLAEDPWRA
>CYA_0513 transcriptional regulator, MerR family
MSELLRVGQVAEKLGITPQTLYFYERLGLIPKPRRTEGGYRLYGEPELER
LAFIARAKALGLTLAEIKELLLLQENGQALPCWQVYVKLTEKLRQIDKSI
AHLQELRGELSTLIEKCQQKFSEQEKSSSCAIFQQQLDNS
>CYA_2474 transcriptional regulator, GntR family
MRISIQPESGIPGSVQLFNLLCFGIACGQFPPGCRLPSTRQLAMQTGLHR
NTIHKVYHQLEAMGLVETRAASGIYVSGTARQAVNRSRGLSKNLDRSKQA
LEQVRQGIDQLQQQGFSLEQVRDLLLAEIDWRLRCSAQVLVCVPRRDLGT
GQLMAQQIQQTLGIRVQLVLLEDLAAVLDQIHSGTVVTLHYFLSAVEAIA
QPRGARVLPVEVSDYAREIALIRQLPSHACLGLVSISTALLEVAEVIVQS
LRADLLVLTAVISDTERVGSLIRRAHTLICDEASYSTLRALVRQARSDLI
RTPNLVCASPHIGEAAMAKLQQELGGIP
>CYA_2699 DNA-binding response regulator
MPEPESSSAHILVIEDEAKLARFLETELAYRGYRVSVVGDGTVALAAARD
QNPDLVLLDWMLPGISGLEVCRQLRLTGNRVPVVLMTASDEVADRVAGLD
AGADDYVVKPFSLQELLARIRIYLQPPKGSGDSRLVFMDLTLDPVTRQAS
RGERQVELTAKEYDLLRYLMEHPRQVLTRQQILEHVWGYDFTGDSNIIEV
YIRYLRLKIEGPGEKRLIQTVRGVGYVLRE
>CYA_1392 DNA-binding response regulator
MEAQRKERILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFRKQD
PDLVVLDVMMPKLDGYGVCQELRKESDIPIIMLTALGDVADRITGLELGA
DDYVVKPFSPKELEARIRSVLRRVARSSHEGIPSSGVIQVGDLRIDTNKR
QVYKRDERIRLTGMEFSLLELLVSRSGEPFSRAEILQEVWGYTPERHVDT
RVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRIVPKGEE
>CYA_0597 RNA polymerase sigma factor, group 3
MLTAPQQPSLDDSEPPAPSTAAAPLFSAKAGAGDSGSGAVGASMASKYED
VKAQTAALLRLYHQTRDPALRNRLVEINLGLVRKEAHHWRNQCDEGYDDL
VQVGCIGLIQAIERFDISRGLAFSSFAMPYIRGEIQHYLRDKSPTIRIPR
RWATLQRQAKKVIARLRQELGRSPSEAEVREALQLTEQEWRELELAQQNS
LLLSLDAPVQVEEDSVALGDTIPDQRYRSFQLAEEDRIRLQNALAKLEER
TRQILEFVFFYDLTQKETAERLGISAVTVSRQVKKGLERLAKLLSQDIF
>CYA_1081 transcriptional regulator, LysR family
MKAITLHQLQIFEVAARHLSFTRAAEELYLTQPTISMQIKQLSKSVGLPL
FEQVGKRLYLTEAGQALYQTCQKIFEQLNEFEMTLADLKGLKQGRLSIGV
VTTAKYFIPRLLGTFCQRYPGIDVSLKVLNRQQVLERLSHNMDDLYVMGM
PPEDLDVVAQPFLENPLVVMAPIHHPLAGQKRIPLARIAQEPFLAREPGS
GTRMAVERLFDKHNLKLNIRMEIGSGEAIRQGIIGGLGISVLSQHVLALG
DWQNHLTILDVEEFPIRGFWHLVYLRSKRLSVVAKAFADFLLSQVSQIDL
DLPPKEPRRANSSPNPDWLSGKGDKLQPPALAATPGGSENHG
>CYA_2756 protein kinase
MAWAVGEELQGGRYRIEAVLGEGGFGITYRAWDSVRAEDVVIKVLKDSIR
EDPDYPRFQQNFMNEALQLARCRHPHVVKVEEVIWEQERWCIVMEYIRGQ
TLHQLLRQKGPLPLPEALRLTREVGSALMALHEQGILHRDVKPANILVRE
GSGQAVLIDFGLARAYAQGLIQRHTSYGTDGYAPLEQYDSLRRRGAFTDV
YALAATLYTLLTGIVPLCAPVRATGRQLDPPRSLNPSIPEEVEAAILKGM
ALHPEERPQTMAEWLALLPGAASQEEKKPLTFEPAIRTQDLRQLERLLAP
QPQDELEQLLAQHSAEELEQMVAPPTPATTKKKEGASGSLVSPEVCLEGQ
GSLPATLPWPDWVGEAAPALQGLWDRLRAGQWGEADRWTTALMLKLGGRS
QVGFFDPKDVEAFPCPMLRLIDQLWMQASHGRFGFTVQKQLWQECDSEKR
GGLSSRSFSALPREECMGEKVGWQIQGRWLEYGELKTNLEAPKGHLPVGF
FWGYSGGLRAALLMLDRAVLKKFKACL
>CYA_0736 conserved hypothetical protein
MRASSPKIGERTVRADISFLKDRFQAPIKVSREKGYHYTDREWRLPTIPL
TKGELFALTLGARMLEAYAGSAYAPQLRSAIGRLAQRLPEQEWLDLQQLA
DERLIFRAGAETHLDWEIWQRLEDACREKRRVWMRYRTASRGDQVSEREL
DPYLLHIYRGTNPYVIGWCHKRQEVRWFRVDRILALKTLPETFEIDPTFD
PKAHLAMIFQHEAGGIPRQVRIWFDAQTAPFIRERRWHPTQVIEENPDGS
LILRITVRGMNDVKRWVLGYGRGARVLEPPDLVDMMRQEICEMSRQYVDE
EP
>CYA_0763 pspA/IM30 family protein
MGVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQ
ETVQRLTEAVATQVAAYQRAEQKYMQKVREYQALENKARLAAQRGDQEAA
RLAMAEALRIEAILGPLKENVETAERYVTAAKQKLAREKERLALYKRELS
NLKDIYEVNKALEQMTRVNNAYSIDSAKSQFEAAKNAIQARQLKARALSE
LSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLPLPDLDFEKRL
PQ
>CYA_2316 DNA-binding response regulator
MLRILIIDDDPSICALLKRYLQRQGYSVEVATTGAEGLQQLRAFQPGLVI
LDLNLPDVSGYDLCQQMQKETGVYVLMLTSRVNPADKLQGFQLGADDYLT
KPFSLPELQARVQAILRRGRTRTETGSAPVLTFPSLVIDPTTREVIRDRR
PINLTALEFDLLYAMARHPGRVWRRSELIQEVWDFNHEGDERVVDVHIGQ
IRKKLETDTSQPELIRTVRGVGYKFEPPTPKEGWGEEKP
>CYA_2285 pspA/IM30 family protein
MGLFDRVSRIIRANLNALISSAEDPEKILNQTIQDMSEDHYQMRQAVAQA
IAAQKRIERQYEQAQQNVDEWQRRAELALRNNNEALAREALVRKKTFAET
AQSLKRQLDEQTKQVEVLKANMTKLESKIAEAKTKKDMLIARARAAKASQ
QINQVIGRVDATSAFAAFERMEEKVNALEAQSAAVAELAVDNLERQFAAL
EAGGSDIDHELMMLKAAMGGQLPAGEQKALPRDQSAATSESEVDVELENL
RREIDRL
>CYA_2859 serine/threonine protein kinase
MNQLAPGKVIGQRYQLVQSIAAGGMGQVFKAVDTRLFNRPVAVKLLHQNL
AGDENTRRHLLKRFQQEIRISTLLGEHPAIVKVLDYGLENNQPYLVMEYL
TGRSLGELLLKQPLLPPQQVVKIARQVCAGLYYAHNLETEQDGHLIKGVI
HRDIKPSNLFVLKDETLGETVKILDFGIAKLLSDVSLALGTQTTGFLGTV
RYASPEQVRGEELDPRSDIYSFGVVLYRMLTGQHPLKPKTDSFPGWYEAH
NYQQPRPFDRSQLPHEIPPALEEVVLACLAKDPGQRPPNMKLLSDQLEGS
LQSDSSAGSALTPPPTTSPFSERTLAALDGQEGAHRLSAQPEPKGRPLPL
WGGIALLAAIAGSTFWGLRLLLDPGTGMERPPAVPLPPATDGQQAIPEPL
LDWLLRDPAGEPAFEDDPDPARDNPQDPPQPEPTPTPATAPAPPPTSPPP
PPTPVPAAPPPRPVAVPTPAAPPSPARVPAKPLPPQPINQPLFPPINRAA
PPAASPTPAQNPTPSFLERLREERERLGKD
>CYA_2262 protein kinase
MSFDLTNRILGGRYRLIQEIGGGGMGSVFRALDLHNNHQEVAVKILHAPL
LLSRGDAQIDLRRRFAEEIRISILLGQHPRIVKVLDHGQEGEQAYLVMEY
LKGQDLGKLMREKGALPLRQVIRLALQACEGLHFAHTFRAKVDGREIRGV
IHRDIKPSNLFLEQVLQEGQLTSQLKILDFGVAKTLADHTLSLGTHKGGG
FIGTARYASPEQIRGKSLDARSDIYSFGVVLYEMLTGSMPFRLETDSLHS
WIHAHCYESPLEINPETTPQPIPPALAAVVMDCLKKNPDERPQTMQELGE
RLLQAYELTVATQLPSSQASTVILPTGGAKAQNEAPPSSDPRPPIKTTGN
TGSASGAFEDIRDEDLDLVEDDPIPPAGAGIPYYIAEREPLPSDPSAEAA
PDPSPKVEGETAETPSTVIQASNTLPAAPPQDPPVPPRTDTPPTRPLPQA
APPTVLQPSGSSLKWVLAGGGAVALLAAFLLWPRPTIRDTQEEPEPISTA
EVTPTPTPEPTPTPTPPPTPTPTPPPTPTPTPPPTPTPTPPPTPTPTPPP
TLTPTPPPTPTPAPTPTPTPVPTPTLTPIPRFTPLVPRTPTPTPTPIPTP
TSTPAPATPTPAPEFALSGQWLYEGGSFVWQGSLCKINVATGIQETVSIQ
QNGDQIIISSPSFSERSGQLIGNQLSVSGRIGGSGTPTVTWSGTVSSDGR
LIRGTATCGSASFAIRLTRQS
>CYA_1145 conserved hypothetical protein
MIEVEVHQQLRQLLRQSPEALWPHQLTMARMVARGLRLGRSTLIQVPAGG
QHRLSYLLPALMWPSATLLCATVSVQAQILGEEIPWLRQTLQLHKPVLQK
DRWPDPDFQGLLLVDPLDWLRARLRGAEMPTGIPLILDGAEDLEEWAYQA
LTVTLEASHWQQLRQIFPAEAERLSQAQVNLALQLLRRPLSRCLLQADEQ
AHLEAALSLVVSYAGWLPDPWDQLRQRLCAEGDPASRWVWWAETDRETGR
LTLYHSPAALHEWLAPIWATQPVVIIGEALDLDRQAEAYRWRLGLPDLTP
LRFSSGEDWIRSGGEPLPSLSLYLPRLPLPNSPLFREHLLQELRSLIPQV
QGFVVVLVSDQPLQVQVGAALAAEFGSRVRVNSLFPGEKGILVCDWPYWL
QHKASLPCPELLAIATLPFPSMEDPRVAGRVQYLQRTQQDWFRQYLLPVA
ASQLQRAVAPLRQGAEAGEASGLPTRWVAILDSRIVARSYGVALLNALGP
ALRIQQRSQLFV
>CYA_1892 DNA-binding response regulator RpaA
MARILIIEDDPSILDILRINLELAGYEVVKATDGVRGQALALQVLPDLII
LDLMLPQVDGLTVCQRLRREERTSEIPILMLTALGQTQDKIEGFNAGADD
YLTKPFEVQELLVRVRALLRRADRIPQTAKHGEILTYGPLTLVPERFEAV
WFGKTIKLTHLEFDLLHCLMQRHGQTVSPSEILQEVWGYEPDDDIETIRV
HIRHLRTKLEPDPRHPQYIKTVYGAGYCLELPNIADPQPLQPELAKDSSS
P
>CYA_1214 DNA-binding response regulator, LuxR family
MDNPKRLLLIDDDPNLILLVKDYLEFRGYEVVAASNGLEGLEAMRHFTPD
LIICDVMMPEMDGYTFVQTIRSNSATDWIPVIFLSARGQTADRVRGLNTG
ADVYLVKPFEPEELVAQVESVLKHTERLLQMQNAVIQPVIKLDREIELTP
TEAKVIQYVARGMSNREIAEVMGVSQRTVESHVSNMLSKTGLHNRTELAR
WALESGLGRG
>CYA_2027 DNA-binding response regulator
MRILLVEDDLEQLEPLQAALAKCGHVVDCASEGETAAWLMEEKAYDLLIL
DWMLPGISGIQLCQQYRRSGGCAPVLMLTAKDATSDIVQGLDAGADDYLV
KPVDLIELLARVRALGRRSPQWQGDSLSLGSLQLHLASLTLERQGRQVQL
SGKEFQLMEYLMRHPHQVLSGGQIEQAVWEWGCEPESNAVAALVRRLRLR
LKEVEAQDWLESVYGQGYRLRIPSPEADP
>CYA_0248 transcriptional regulator, BlaI/MecI/CopY family
MLPKHRPKQLSLGPLESEILDILWELGSASTRQIHERILADPDRELAYAS
VTTVLRRLSQKGWVSCERRTDAEGRSLPMLWRPRLSRQEAASLRAFAQLQ
QFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAAREARRDPQ
>CYA_0673 HD domain protein
MSTQLTPRFAEAMRYAYRWHAAQTRKGTRIPYLSHLLAVASIALEHGADE
DEAIAALLHDSLEDGPRYSGEPRAQIERELREHFGERVLQIVLGCTDTDS
DSSLGEPKEDWKERKVAYLKHLETADASVLLVAASDKLHNVRCILRDFRQ
LGDQLWERFSGGKEGSLWYYRSLAEILGRRLPSRLAVEFQELVVELQRAA
GSGPATA
>CYA_0413 putative transcriptional activator TenA
MSQSFTAHLWQTIEPIYQQILDHPFNQELAAGSLSRQRFQFYLQQDALYL
TDFARALALIGARSEGAERVVSFLNFALGAIVAERSLHESYFRLYDIQPE
TTYAPACFAYTRFLLAAAALDPYEVAMAAVLPCFWIYREVGSAIYRTAKP
NNPYQQWIDTYAGEEFAQVVQQALDITDSLATQTTAATREKMTAAFVTAS
RLEWLFWDSAYRLETWQPA
>CYA_1882 serine/threonine protein kinase
MPNCYCLNPDCLRPENPPAASTCAFCGQPLLLRNRYRAFKRLGQGGFGAT
FLARDEDMPSKPWRVIKQLRPAENSPQLARLAEELFNREAEVLERLGEHS
QIPKLYAHFQEGGKFYLVQEFIEGITLAQEMRRNGPFSEEQARQVMQEVL
LILSYVHSHNTVHRDIKPANLIRRKEDGRLVLIDFGAVKQLGPGHTLSEE
GTAIRSLGFSPPEQMAGQAVGPASDLYALAATCLNLMTLESPAKFYDHNT
GQWDWSDRLQLSPEFDAILRRMLHPVISQRFATATEALRALQGIPVQEGP
PSSPVILPPSPLTAGSSPLLISDHWTRRRSTSPPPARTDGFSPTPLPRPG
AGDMLPLGSVPTGWGSTTGFTQLGQASRITGGGQIKPATPPRIPSLAGAD
LRGKSFANQNLAGYDLRCADLRGADFSGANLQGADLRGIRFNTPQPRWLR
FLSRLLGSAKTLGEILAGLGGLLGAGSLAFLLVHLATRNVVYALGAAGMA
LVVAGSVLWSAGGRTSLPRQAEEKGKRFTSFYKADLRGAQMDRKLREFAR
RQGAILS
>CYA_0320 conserved hypothetical protein
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNL
RGKLKWEGDLHEQRLSSP
>CYA_1944 RelA/SpoT family protein
MGQPAVAASLEGGFDLNSLDFEVPGWLRALLSGAEDLGDGLRSYTAEEAD
LLRRAFEFAYCLHKGQKRKSGDPYIAHPVAVASLLRELGGDAVTVAAGLL
HDVVEDTEVTLEALEAEFGPEVRLLVEGVTKLSQFNFSSKTEQQAENFRR
MFVAMAKDIRVIVVKLADRLHNMRTLQYLPPHKQKQIAAETMEIFAPLAN
RLGIWHFKWELEDLAFKYLDYEAYRQIQELVNAKRSEREAEIQAFIEELR
KHLIQGGLEHFEISGRPKHLYGIYRKMQQQRKEFHEIYDLLAVRVIVQTV
SECYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPVEV
QIRTEEMHRVAEYGIAAHWKYKEAGSTPVKPEEERFTWLRQLLEWQNDLK
DDKEYLDTIRENLFESEVYVFTPKGDLLALPQGSCPVDFAYRIHSEIGDH
CAGARVNNKIVPLNTRLRNGDIVQIITHKNAHPSLDWINFVATSSARNRI
RQWFKRCNREQNIARGRDLLERELGKTGFDALLKSERMQKVAEKLNYTSV
DDLLAALGYGEVTPTQVLHRLQEVSKPAVSPPPEEGSLEEAKLLLPRANG
SRGSSRSQSPILGVEGLKHQLAKCCNPLPGDPILGVVTRFKGITIHHRDC
PRVAQVPGERLVPVRWNEEQLRQSTQIYPVELRLEVIDRVGVLRDILSRL
SDQSINVRNARVQTFANRTALIDLCIDVRDKKQLDQVQSQLRQLSDVLVL
RSRHYQNGSR
>CYA_1910 response regulator
MFEVESRTAPLKFLIVEDHPEVAQNNCEWLQRLAADAQCITVSNPMDAIL
RLQREQPDLVVADLLYGQTSGEQSAEPGLEFLRHIFENYPTLNVMVYSSE
PLLLTPLVGLISKHQGGFAAVNKMERRSVFLEGAKSALNGELRMPRELRG
LTKLTEREIEVLNLLCKEALTDQAIADRIHTSKKTVQNCIQRLKEKLDIF
GSEDEINARVAMCMAAVQKKLIQW
>CYA_1758 transcriptional regulator, MarR family
MAAREPFLGLLRDLARAYQAFENYAGAHIRQMGLTAPQFDVLVTLGNTPG
LTMNVLAQKTLVTKGTLTGIVDRLEQKGLVRREVPPENRRCFKIVLTEEG
EKLFEQVFPAHVAYLKERFQKLDPEEMAQIQACLKKLQSIFHLPRGQTQD
C
>CYA_1252 GAF domain protein
MSHGPFAFDLSPGEAKFEAAAALRLSQRLIQVGIALSSETDLRRLLELIV
AQARELTCCDGASLFIREGEELRFFVVNRNEELQDLRLPLAPSSIVGYVV
LTGESLNLPDVYRLPAGLPYAFNSQVDQQTGYRTRSLLTVPMRDPSGNIL
GALQLLNRLRPDRPADLAPDQVADWSQPFSELEVQVAEALASQAAVAYQN
VRLREELKAAHLETIFCLAQAAEYRDQDTAFHLKRMSHYSRILAKELGLS
SHEQELIFYASPLHDVGKIGIPDAILQKPGPLTPEERLIMNRHPEIGYEI
LSKSDSELMKKSAIIALTHHEKFDGSGYPRGLKGEEIPLEGRIVALADVF
DALASRRPYKKAWNLDEIFGFVESQSSSHFDPHVVAAFTRGRGEILEIYH
RYQEPR
>CYA_2336 response regulator
MQSAQAERPVRVGIPEIAPFGEQEPAGHLLIVDDQPHSRLLLGDLLESIG
YRVSEAENGQQALQMLPSLQPDLVLLDVMMPGLDGFEVCRRIKADEETRL
IPVVLIAAASDRKNRLRGIEAGADDFLSKPFDESELLARVRSLVRQKHLN
EDLDHAAQVLFAIARSVESRDPTTGDHCERLAALAKSFGEFLQLPRPLIK
VLAWGGYLHDIGKVGIPDAILGKTGKHTPEEWEVMKSHVLIGEEICRPLR
TMRDVLPLIRHHHERWDGSGYPDGLKGEAIPLVARVFQIVDIYDALTSER
PYKRAFTVQEAMDILRQETTKGWRDPYLVERFFEFLRSRLPHLE
>CYA_0233 fibronectin-binding protein
MQPVDLTTLRAVLADLKGAEAGGDPLLPARVEWIQQTDLWTVVIGLRTLK
ARPCLLLSWHPQAARVHLCQAPPKEAEDLPFSQHLQRHLRGLALTELALL
DEWERVIDFRFAPRPADPPQRHLYLEVMGKYSNAILVDEGGMILACGHGV
SERQSRVRPVQPGLLYEAPPALSDPIPQRAEPFSQWQERLALIPGPIAQR
LLRCYRGLSRHLAEAMCLQAGIPPQTPSNQLSPQEWQALFFWWQDWLARL
ETAQFKPALTPQGYTVLGWRGSGGDPSTPNLHQLLEAYYQAQLNRERFER
ERQRLGQKLAALLKKLRQRQEHFERMLADSAQAEASKQAADLLMAHLHLW
RPGLSLMELPDFFSGQMVKIPLDPEKNAVLNAQAYYRKHRKQKRAQEAVQ
PLLEAVAQEIRYLEQVEATLQHLGTYRDPQDLAALREVETELIQQGYLES
PSRAEGSRRASSASFNPYRFTSPSGFSIWVGRNNWQNDRLTFRVAQDQDW
WFHAQEIPGSHVLLRLPPGAVAESEDLQAAADLAAYFSRGRFSDQVPVVY
TRPKCVFKPKGSPPGMVVYQQEQVLWGRPSRAQLLVEKEGAPKPEVPAEL
QPSTWG
>CYA_0927 DNA-binding response regulator, LuxR family
MKRVLVVDDDPLSLKVLSRHLTQHGYRVCTGASGVEGLRLFAQEQPDVVV
SDVVMPEMDGFEFCRQLRQQRGGELVPFIFLSSRSELDDRVQGYEWGADD
YIIKPFEPLELVAKIEAQIERARRTQLEILRLIQQQTQAKAEAAPRPTLA
DLPLTPAEERVFREVIRGLTNKQIGEKLFISPRTVQTHLTNILSKLSLEN
RSQLVRFAYERGYIPREESSDKK
>CYA_1709 aminotransferase, classes I and II
MALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPAL
FVPECRWRLGGDPLPGLATVFGIPALSQLVLVIVASVGLSSSPALKIRMR
PLLETLFARRAQAVIPPPVGAEIAGAVPVVTSFTFGLADPRLFPKADLAR
ATAEVLAEDGDAALNYGGTFAGLIEVVQQLMRARGVEAQPENLLIGYGSG
QILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLISIPVDGEGMVV
DRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYG
VVVVEDEAYYDLRFVGDPLPSLAALDKEGWVLHVGTFSKIVAPGVRVGWA
CGHPEIIRRLEMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREK
CHLMLEAIAQCFPPEVKVEAPGGGFFIWCELPPPLSANTLL
>CYA_1718 transcriptional regulator, ArsR family
MTLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQAN
VSKHLKILAQAGIVSREPRGVSVYYQIADPICFELCEVVCKQLIERLKQQ
ARQLQPLAALHSGRLSREGS
>CYA_2633 putative DNA-binding protein
MGRRGSHRLPQSGKEYSQSLAPMESNLNQHPPSANLIGERVRWVREKLQL
TQDQLAGRLAKYGVQLDYVKIGQVEKGKRRVIDKELVAFAKALGVSVTWL
LSGDESHL
>CYA_2146 serine/threonine protein kinase
MDSPGAVSRRTRTTKSIHDSYQILGLAGQGQYGRVFCARPRHGGDLVALK
ELPAERFPTPNLLRELRYLLTLNHPNITRCYALEHAREGRYLVLEYCEGG
TLRELIDQVERGLWLPVKQVLGFVDQILAGLDHAHRQGVIHCDVKPENIL
LKPTPQGWQLKLTDFGIARHPQPAPGEISATGSPAYMAPERFYGQFSPAS
DLYAVGIILLELLTGRRPFSGSPSQLMHAHLNQPFVCPEGIPAPLQELLE
ITLRKLPLRRFRTAAQMRSALATFAREWQEPAGCWVGPRLSRRSPPGLQV
WDLPDPGFVGEGGRESLPEQKFCICEDPSGSRSPLLLRVTPQRLEWLDLQ
TLASGAPPLACFSLAEPLQQVLPLPSFPEALAFSKSNLLHLSPARVRTLL
SFAEDWRATWLAERQELVWATAKEIGAVQWLPAGPTVAQPFPEFHCYFRW
PWQVPTGSLLRLLALSEHLVLLAGLGRQWVEMTVLPYPAAWPPQTGSQPL
RYRLPLDPRGRVLSLGERLLFAGGDGGGQGCCPHLCSVQVNPLRLRRWFL
KGWPLQMAKAPWGVLLLCREGEEFSSLWLYSEGGYPLAQVAVPVGSEVLQ
VGQRGLVWLQVPKAGKPQQFQLWQLDLNQLPANGHAAEGVALG
>CYA_0421 DNA-binding response regulator
MARILLVDDEVELADSLAQHLRREGHSVDVAYEGNSAWELLQKPPAPPYD
LLVLDWMLPGLSGLSLCQQVRQVDRATPILFLTAKDTLDDRVEGLDAGAD
DYLVKPFELRELLARVRALLRRAAGPGEGIPRLQIGDLELDRENQVAYRQ
GRMIHLSQKEFRLLEYFMAHPGQLLTHEQIYERVWAGEDPPSSNVLAAQV
RLLRRRLRLPGSPELIHAVYGKGYRFGPVAEDPQQPPTPLSPWERG
>CYA_0890 csx3, CRISPR-associated protein, Csx3 family
MSAVALQLRSGYLAHWPQKPHLGGLPFQVIEIELTRPDRLVFPEDLAQLR
LPGGIDPRLGVVLSGRAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSH
SPDVQVGEIIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKSRLARAL
FEALLPEHPDIYLQRAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFS
FHAQAILALRRQKSLVIVDVGGKVDPQKQPILEACSHYLVVSRDPEAIPL
WHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELEIRWDPNSPPPAELLRA
VRRLIH
>CYA_2590 hrcA, heat-inducible transcription repressor HrcA
MKLELTPRQRKILWATVRRYIATAEPVGSKTLAQSYNLGVSTATIRNDLA
TLEQVGLLFQPHTSAGRIPSDFGYRVYVNDLLSSANMDGIPNDAPQPEPH
PALQQLLDQLNRELGDDLDSFLQRVAQLLAHLSGCIALITPPQGPVVAVH
HVQLLSVGPGRVMVLVVTDSYQTHSALVSPPDWPDDRREDLEDELQLLSN
FLTLKLRGKTFAELQDLSWLKLDEEFRAYSHWLQQLLRSVVQRYLRPSLG
QVFSAGMTELMRQPEFSQAQRMQAVAQLLEEGSEQLQGMIGLYSTPGCLF
TSEAALSAPSAREKASSSTADQDPSHNVPVIIYIGSENPLESLHHCTVIA
SVYRRRSAPLGTVTLLGPTRMAYERSIAAVQTVASHLTRALA
>CYA_1763 mfd, transcription-repair coupling factor
MSFIPLVRFLAQSGLMQELAARLRSQRQADLQGAGRIPKGLIASALAQQE
GRSLLVVTATLEEAGRWTAQLEGMGWESVQLYPTSEASPYEPFDLEPELV
WGQFQVLADGLQGKKGMAIVATERALQPHLPPPEVFRAFCLKLEPGLEMS
PQQLGQQLARLGYRRVSLVESEGEWSQRGDILDVFPVACEWPVRLEWFGN
ELERLREFDPVSQRSQDGIPYVWLTPTGYGPILWPALQEKADQLSQGLRQ
QLEQSPTPPEGLRRFLGLLYTPPANLLSYLDPTTLILIDEPEQCQAHSQQ
WLYHAQEQWKQAQVAEPALQPFHRPFDLHAPDWDPFPCLLARTFAPAGEA
EAALDLKSRAVPAIPHQFGSLAKTLREYRKQQLQVWILSAQPSRTVALLQ
EHDCPAQYVPNPKDFPAIERQLQSYTPVALKYSSLADLEGFLLPTLGWVV
LTDREFFGQHSLATPTYVRKRRQASSRQVDPNLLKPGDFVVHKAHGIGQF
LRLESLTIGGETREYLVIQYSDGLLRVAADQVNSLSRYRASSDGPPALHK
MSGSTWEKTKQKVKKSLKKVAFDLLQLYAKRAEQEGYAFPPDSPWQQEFE
ESFPYPLTPDQIRAVQEIKRDMESPRPMDRLLCGDVGFGKTEVAIRAIFK
AVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTPEEKKE
ILARLKSGELDVIVGTHQLLGKDVQFRDLGLLVIDEEQRFGVNQKEKIKL
LKTQVDVLTLTATPIPRTLYMALSGLREMSLIQTPPPSRRPIKTHLSPYN
PEVIRTAIRQELDRGGQVFYVVNRIEGIEETSAKLREWVPGARIAIAHGQ
MPEGELEATMLAFNNGEIDILVCTTIIESGLDIPRVNTILIENAQEFGLA
QLYQLRGRVGRAGIQAHAWLFYREDGILTEEARKRLQAIQEFTQLGSGYQ
LALRDMEIRGIGNLLGTQQSGQLNAVGFDLYLEMLQEAIREIRGQEIPQV
EDTQIDLNITAMIPQSYIPDEDQKMQAYRQLAAAGSRVELLQIAQEWQDR
FGPLPKPTQELLRVMELKILARTLGFSRIRPAKEHVLLETPMEEPAWNRL
KEALPAHLQSRFVYQPGKVTVRGLGMVPAAQQLENLLQWLDKMSLALMEA
RIPTAT
>CYA_1083 nrdR, transcriptional regulator, NrdR family
MKCPRCGKQEIRVLESRSAEGGQSVRRRRECMSCGYRFTTYERIEFMPIM
VIKRDGSRESFNRNKILQGVMRACQKTQVSVKQMEELVNEIEEKLQLEDV
QEVTTLRIGEMVLERLQRLSEVAYVRFASVYRKFQGIKDFVTELEQLERL
ETHLRRDLERPLRNSPPSESESTASPDWVGGIPQLLDQNDTSSNLSEIPK
>CYA_0457 nusA, transcription termination factor NusA
MSMVPLPGLAEMVEMISRERNLPRHAVTNALREALLKGYERYRKTIQRDV
VFEEDHFRNFDVELDVEAGGFRILATKTIVEEVRDPDHEISLYDVQQDYP
EAEVGWEVTNDVTPQQAEFGRMAAIQTKQVLAQKLRDQQRRLIQEEFRDL
ENTVLQARVLRTERQTVIMAVSSGFGQPEVEAELPKKEQLASDRYTPNAV
MKVYLKKVYEGSRRGPQLLVSRADAGLVVNLFANEVPEIEEDIVRIVAVA
REANPPSRNVGPRTKIAVDTVERDVDPVGACIGARGSRIQAVVAELRNEK
IDVIRWSPDPATYIANALSPAKVVEVRLVDPEIQQAHVLVTSDQLSLAIG
KEGQNVRLAARLTGWKIDIKEVESYRAALEEAQAQGLPYPFITPAALERF
RRREERAALGLDEEYPEKLRLEEELEEDDRLEEDWVEEDEDFDYDAEFDI
AQPKA
>CYA_0350 nusB, transcription antitermination factor NusB
MQPRRVARELALLGVNQLPATAAKLSEKQLEDLLLAAIRALQEETHETLS
TAAAEIQRSDRLLHESDPLLLAASDAKEEGGARSLTVRLQQAQRHLQRLE
TALKEANAGDTVQGELLELAHQAQVALSNAGQALEHLEQRLYSVRRILDE
VVQLSQKAVNRLGVALSMPELLHIAQAQEVRAYALQLLTALRTHKEAIDA
RLQGVLVGWQLKRVGRIERDILRLAVVEMEILRSSPDKVAINEAVELAKK
YGDPEAAAFVNGVLRRLVDSRMEAPFGRNPSPAGDLRS
>CYA_1778 nusG, transcription termination/antitermination factor NusG
MSPEPEQRRRGRGGRLEPLEPAGTAAEGEESESQGRRNLRWYAVQVASGC
ENKVKSTLMQRAAALDVADQIVEVVIPKRTGFKLDRSGKRQEQEEKIFPG
YVLVRMDLNDDTWMVVKTTPNVINFVGTEERRAYGRGRGHVTPRPLSPSE
VQRIFSSVEVEEVPLKIDMAPGDRIEVLSGPFQGFYGEVVDVSPERGKLK
ALISIFGRDTPVELEFGQVRKEV
>CYA_2013 recG, ATP-dependent DNA helicase RecG
MFGQDPPAGWTLDGEERRRWKELGSRYRLYPQLELAERQHLVAETRRWLD
RLRRQQEQAQSGPPSPALPPPKGLSLEQPLQFLKGIGPKSAEKLAQLGLH
TVRDALYYFPRDHLDYSRRVLIRQAKVGETVTLVGTVKSCSCFTSPKNPL
LTILNLKIADKSGIVTLSRFYSGRQFAQRSWQAALERQYPKGAVVAASGL
VKKGRLGLTLDNPQLEVLGGEGEDPERLGKILPVYPLSEGIPADLVRKAV
QLALPAAALVEDPLPEPLKRQLQLLDLPLALQQIHFPKTQELLAQARRRL
VFDEFFYLQLSLLQRRQRYRAQAQAVPRYQPARGELLDRFYQILPFQLTA
GQQRAIDEILADLRDPLPMNRLLQGDVGSGKTVVAVAALLAAIQSGWQAA
LMAPTEVLAEQHYRKLVEWLSQLQVPVELLTGSTPPAKRREILRQLQTGE
LPLVVGTHALIQPAVQFRNLGLVVIDEQHRFGVEQRAALQQKGDHPDVLT
MTATPIPRTLTLALHGDLDVTQIDELPPGRKPVHTVVARPGDRLQVVRLM
EREIAQGRQAYVVLPLIEESEKLDLKSAIEEHQRLQEKVFPQFRVGLLHG
RLTSSEKEAVIEAFRRRELDILVSTTVVEVGVDVPNASVMLVEHAERFGL
SQLHQLRGRVGRGSDQAYCILMTGSQSEEALRRLKVLEQSHDGFFIAEMD
LRFRGPGEVMGTRQSGLPDFALASLMDDQEVLQLARQAAEQLIAQDPELQ
QWPRLRRILEERQARLLGPALLT
>CYA_0804 rnc, ribonuclease III
MVEPIPPRRRALEHLLNRLGFKDPAWLEQLRWDLLDQALIHPSLDGQRNN
DRLEFLGDSVLRILATEFLFQSYPHLSVGELTAVRSDLISDAHLAELADL
HGLERYLEVGSSSQNDLAGRERRLADAFEAVLGSLYLSWGMHTLARLHPW
LDPYFRQRVEQWFQDPTRRNPKAALQELTQRLWGTLPEYRLVAAREHPPH
FTMEVWGHGQCWGRGEGRSKKAAEMAAAAQAYGHLQSQEIR
>CYA_1451 rpoA, DNA-directed RNA polymerase, alpha subunit
MMQTSRTLHNLGSKAASSAAPYQTECVESHQEANGVHYGKFALGPLERGQ
GITVGNALRRVLLSNLEGTAVTAVRIAGVTHEFSTVPGVREDVMEILLNM
KELVLRSNAPDTQVGRLVAQGPGEVTAEKLQLPSEVEVINPRHHIATLAE
GAILEMEFMIGRGRGYRAVDYSDSKSMAIDFLQIDSVFMPVRKVNYTVEA
ARVGQSLEKDRLILEIWTNGSLTPQEALSQAARILVGLFSPLQEVSFDTP
PEPRQAEDNQKNQIPIEELQLSVRAYNCLKRAQINTVADLLVYTEEDLLE
IKNFGQKSAEEVVQALKNRLGLTLPRERSKT
>CYA_0409 rpoB, DNA-directed RNA polymerase, beta subunit
MTQLAVPSPAAPTLPDLVEIQRESFLWFLREGFEEELLSFSPIVDYTGKL
ELHFLPEYRPGDPSKGYKINKPRYDPEEAKRRDATYQAQIRVPTRLINKE
TGEIKDMDVFIGELPLMTDRGTFIINGAERVIVNQIVRSPGVYYKSELDK
NGRRTYSASLIPNRGAWLKFETDKNGLVWVRIDKTRKLSAAVLLKALGLS
DSEIYDSLRHPEFFQKTMEKEGHYSEEEALMELYRKLRPGEPPTVSGGQQ
LLESRFFDPKRYDLGRVGRYKLNKKLNLNVAENVRVLTVTDILAVIDYLI
NLEYDIGHVDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSE
SENLTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSAL
GPGGLSRERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHARVNQ
YGFIESPYYRVENGVVRKDLGMVYLTADEEDEYRVAPGDVPVDAEGRITA
DLVPVRYRQEFTTAHPSEVHYVQVSPVQLISVATSLIPFLEHDDANRALM
GANMQRQAVPLLKPDRPYVGTGLEAQAARDSGMVVVSRTSGVVTYVSADE
IVVRPDDGGDPIVYRLQKYQRSNQDTCLNQRPLVYAGDRVVPGQVLADGP
ATEGGELALGQNVLVAYMPWEGYNYEDAILISERLVYDDVFTSVHIEKYE
IEARQTKLGPEEITREIPNVGEDALRNLDENGIVRIGAWVEAGDILVGKV
TPKGESDQPPEERLLRAIFGEKARDVRDNSLRVPNGERGRVVDVRIFTRE
QGDELPPGANMVVRVYIALKRKIQVGDKIAGRHGNKGIISRILPIEDMPY
LADGTPVDVVLNPLGVPSRMNVGQVYECLLGWAAEHLGVRFKLMPFDEMH
GLEASRLTVEAKLREAREKTGKDWIFNPEGKYCGKIQVFDGRTGEPFDQP
VTVGRAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEME
VWALEAFGAAYILQELLTVKSDDMVGRNEALNAIVKGKPIPRPGTPESFK
VLVRELQSLCLDVSVHKVEVDSDGQTRDVEVDLMADVSSRHTPSRPTYES
VTSEDLSPAAGGTFTLARRSREEDEDREEEDDF
>CYA_0410 rpoC1, DNA-directed RNA polymerase, gamma subunit
MAKTEQRFDYVKIGLASPERIIEWGQRTLPNGQVVGEVTKPETINYRTLK
PEMDGLFCERIFGPVKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRH
RMGYIKLAAPVTHVWYLKGIPSHIATLLDMPLRDVEQVVYFNAYVVVDPG
NAPNLSYKQLLTEDQYLEIEDQMYEEGSELQLPENWAMIGAEAIERLLKD
IDLEKEAEQLREEIASARGQKRARLIKRLRVIDNFIATGARPEWMVLRVL
PVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEIMAPEIIV
RNEKRMLQEAVDALIDNGRRGRMVVGANNRPLKSLSDIIEGKQGRFRQNL
LGKRVDYSGRSVIVVGPNLRMHQCGLPKEMAIELFQPFVIHKLIKRGIVN
NIKAAKKLIQSNDPQVWDVLEDVIDGHPVLLNRAPTLHRLGIQAFEPILV
EGRAIQLHPLVCPAFNADFDGDQMAVHVPLSLEAQAEARLLMLATNNILS
PATGAPIITPSQDMVLGCYYLTADNPHAPDLGDRYFASLEDALIAYDRGV
IGLHSKIWVRYSGPMELGKEEKESEPQIIEEPGGTRLKITNYRRIREDRD
GNVISQYIRTTAGRIIFNKTVQDILSA
>CYA_0411 rpoC2, DNA-directed RNA polymerase, beta'' subunit
MSEKGRFSAGLVRQAADGAKAKTPPPPVPFRNYQIGKKELRNLIAWSFAR
YGTARTAQMADALKALGFKYATQAAVSISIEDLRIPPSKRQLLAQAEAEI
EAATERYTRGEITEVERYQKVIDTWNQTNDQIKEEMLSNFRQNDPLNSVY
MMANSGARGNVSQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEYI
ISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVRESDCGTDQGILLE
PLMDADKVVVSLEERLVGRVLARDVVHPQTQEILARRNQEVDHDLAKAIV
EAGIRQVMVRSPLTCEANRSVCRMCYGWSLAHSRLVDLGEAVGIIAAQSI
GEPGTQLTMRTFHTGGVFTGEVARQIRAPFAGVVRFPKNLRTRPFRTRHG
DDALQLEANNQIVLEGPDGQREVFDMTQGSTLLVRDGAQVQRDQLIAEVT
VAKAVRKSTEKAQKEVVADLAGEIRFADLPIEEKTDRQGNTTCTAQRQGL
IWVMSGQVYNLPPGAEPVVKNGDRVQAGDVIAETSLVTEHGGIVRLPERS
DTKSGREVEIINAAVVLHEARVRVESHQGREQFLLDTASGQTFVLKATPG
TKVGNDEVVAELIENNFRTQTGGLVKFAGVEVARRGKAKQGYEVIRGGTL
LWIPEETHEVNKDISLLNVEDGQYVEAGTEVVKDIFCQNAGVVEVIQKND
ILREIVIKPGSLHLVDDPADLEIPTGTLIQPGQKLLSSIVPDRLVYLEQV
ETPEGPGLLLRPVYEYEIPDRPVVPSQESTSESGRSIRLRAVQRVPFKDG
ERVKSVGPVELLRTQLVLEIDTDAPQLKADIELIQDEKDPSIRRLQLVIL
ETLLLRRDVEADLTQGSTHTRLLVSEGDSIGRGGVIARTEIQAKKAGIVQ
GIRQGAEVVRRVLVVTDDDLLTVPLTGQASVEVGALVRAGDELAPGIPAP
ESGQVMQIADGQVVLRLARPYLVSAGAILQVRDGDLVQRGDSLALLVFER
AKTGDIIQGLPRIEELLEARKPKEMCVLAKRPGTVQLSWRGEEPDLRVIE
ADGTVTEYSVMPGQNLIVVDGQPVQVGDPLTDGPANPHDLLEIYFEYHRQ
TLGDDQAARLALREVQRFLVNEVQNVYRSQGVEIADKHIEIVVRQMTSKV
RVDDSGDTVLLPGELVELREIQQTNATMAITGGAPAKYTPVLLGITKASL
NTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFS
TYEEMAPEPEPEEEEEPVVLPELPPRLILDDDQLIDDSTPVDEPTEDEGE
EE
>CYA_2410 rpoD, RNA polymerase sigma factor RpoD
MAQAKELVQSGHTALLEPDLESSSSIPLDADNEVDPLETELDASDTDAFD
EDDEDDEESLEEDADAAAAAAKGRSKRKAASKKKPYTDDSIRVYLQEIGR
IRLLRADEEIELARKIADLLELERAREAVFQRMGLWSDPEEVPETLWAEE
VKMSLPEFRRRLHRGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQE
GSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLY
ETISRIKKVTKQLSQELGRRPTEEEIATRMEITIEKLRFIAKSAQLPISL
ETPIGKEEDSRLGDFIESEGETPEERVAKVLLREDLESVLETLTPRERDV
LKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLK
EYIR
>CYA_2848 scpB, segregation and condensation protein B
MPSRRSKSVSDSRPEIGGGRLLALKNQIEAILYLKGQPLALSTLAQLAHC
SREEAYDALLELMEDYAHRDSALEVLQVEEGFALQLREPFLELANQLLPP
EIGVGATRTLATIVLRGPLSQADLVELRGQGAYQHVAELVEKGFVTRYRK
EGSRSPWLRVTDKFHRYFTVERLAETAAASFPEA
>CYA_2189 sufR, iron-sulfur cluster biosynthesis transcriptional regulator SufR
MESAHKITGRFTQPLSSKQAILVYLRKAGQATAQTLAEHLGISPQAIRRH
LKDLEAEGLIHHVAQASGLGRPQHFYQLSPQGEAQFPTSYDEFALGLLNT
LAETLGSEQMGSLLQQQWQRKAQEYQAQMGCGSLAKRLERLVQLRQAEGY
MAEYYPYPNHLAAARATEGAEQYAEQYVLVEHHCAIAQIAQRFPSVCGHE
LEMFAAALPDCRVERLTWQVNGEHQCGYWIARMGSPPRPSHE
>CYA_0606 ureG, urease accessory protein UreG
MKPVKIGVAGPVGSGKTALIDRLAKAMRDRYNLAVITNDVYTYEDAEFLV
RSGALPPERIAGVRTGGCPHTAIREDPAANQEAVEAMLARFLDLDILFLE
SGGDNLAASFSPELVDVWIYVIDVAAGDKIPRKGGPGIEKSHLLVINKID
LAPLVGADLGVMERDTRLKRGSRPWVFTNLKTGEGLDSVVEWIRREVLFE
GD
>CYA_0181 zam, acetazolamide conferring resistance protein Zam
MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAG
FLERTGDPPRYRRKPDESLVVGRLRCSSKGFCFAVRDEPGAEDVYIHGSN
LSGAWNGDQVIARITKEGNRRRSPEGEVVAVVERANPTLVGRLKQTEEGF
RVVPLDDRLLFELALTEGSPAELAEGRVAYVEVERYPLGNLPPVGTIRKI
LGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLSRSDQKNRRDL
RDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDP
DHPLEREAQRRTATVYLDSVVLPLFPPEVHSRLALLPQQERLAYSLLLTI
DPEGVVRNFEIHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALL
QNLLRLSQVLRVKRHQAGGFDLPLLDLLTPYSADESGYGPLLVSDRLGAH
ALMTEILLLANQILGHHLRRLGIPSLARVQKPPTAEALQNFLRLANAMKL
DLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQLLATLPPVEYC
LQPLQEPLGHFGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRS
PRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLPKIQAGYQLHQ
QAERELMGLKRCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRV
STLKNDWYEYRSRQQALVGRKSRRQFRLGDRVEVQIKNVDYYRQQIDLAV
IGEGRPYEEEE