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2024-05-01 00:16:19

Gene list

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COG category: Transcription
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab

Number of genes found: 99

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. JA-3-3Ab, JA-3-3Ab
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CYA_0233 fibronectin-binding proteinchromosome CDS233619 1821 + 0.629325
NA CYA_0320 conserved hypothetical proteinchromosome CDS333689 207 - 0.570048
NA CYA_1033 DNA-binding response regulatorchromosome CDS1050354 750 + 0.602667
NA CYA_1490 RNA polymerase sigma-70 factorchromosome CDS1496753 663 - 0.618401
NA CYA_2394 DNA-binding response regulatorchromosome CDS2405090 780 - 0.621795
NA CYA_2037 RNA polymerase sigma-70 factor familychromosome CDS2056745 1095 + 0.598173
NA CYA_2417 transcriptional regulator, LysR familychromosome CDS2427961 951 - 0.605678
NA CYA_0201 DNA-binding response regulatorchromosome CDS206915 597 - 0.624791
NA CYA_1214 DNA-binding response regulator, LuxR familychromosome CDS1225785 633 + 0.578199
NA CYA_0927 DNA-binding response regulator, LuxR familychromosome CDS937057 672 - 0.59375
NA CYA_2699 DNA-binding response regulatorchromosome CDS2714420 693 + 0.593074
NA CYA_0548 acetyltransferase, GNAT familychromosome CDS562722 495 - 0.620202
NA CYA_2633 putative DNA-binding proteinchromosome CDS2650477 327 - 0.58104
NA CYA_2333 protein kinase domain/TPR repeat proteinchromosome CDS2337765 2859 - 0.637636
NA CYA_1226 rrf2 family proteinchromosome CDS1236952 441 + 0.60771
NA CYA_2262 protein kinasechromosome CDS2269929 2166 - 0.609418
NA CYA_2027 DNA-binding response regulatorchromosome CDS2043231 690 - 0.63913
NA CYA_0513 transcriptional regulator, MerR familychromosome CDS532955 423 + 0.534279
NA CYA_1145 conserved hypothetical proteinchromosome CDS1169041 1539 + 0.637427
NA CYA_2271 conserved hypothetical proteinchromosome CDS2279868 633 - 0.63981
NA CYA_2195 transcriptional regulator, AbrB familychromosome CDS2214617 453 + 0.529801
NA CYA_2474 transcriptional regulator, GntR familychromosome CDS2483586 987 - 0.614995
NA CYA_2441 transcriptional regulator, MarR familychromosome CDS2451933 516 - 0.602713
NA CYA_1992 peptidase, S24 (LexA) familychromosome CDS2011735 657 - 0.596651
NA CYA_0413 putative transcriptional activator TenAchromosome CDS434337 660 - 0.595455
NA CYA_2066 RNA polymerase sigma-70 domain proteinchromosome CDS2086424 834 + 0.628297
NA CYA_0322 putative helicasechromosome CDS338498 2895 - 0.633851
NA CYA_1910 response regulatorchromosome CDS1920107 675 - 0.552593
NA CYA_0423 putative transcriptional regulatorchromosome CDS442169 453 + 0.653422
NA CYA_0796 DNA-binding response regulatorchromosome CDS805640 738 + 0.611111
NA CYA_2316 DNA-binding response regulatorchromosome CDS2319170 720 - 0.572222
NA CYA_0248 transcriptional regulator, BlaI/MecI/CopY familychromosome CDS252522 435 + 0.625287
NA CYA_2069 conserved hypothetical proteinchromosome CDS2088582 366 + 0.560109
NA CYA_2146 serine/threonine protein kinasechromosome CDS2158113 1932 + 0.645963
NA CYA_0373 serine/threonine protein kinasechromosome CDS388505 1953 - 0.626216
NA CYA_2351 transcriptional regulator, LuxR familychromosome CDS2358672 264 - 0.507576
NA CYA_0337 putative transcriptional activator,Baf familychromosome CDS356210 735 - 0.684354
NA CYA_2285 pspA/IM30 family proteinchromosome CDS2290125 774 - 0.587855
NA CYA_1081 transcriptional regulator, LysR familychromosome CDS1099814 1029 + 0.541302
NA CYA_2028 conserved domain proteinchromosome CDS2043999 393 + 0.633588
NA CYA_2756 protein kinasechromosome CDS2778001 1584 + 0.63005
NA CYA_2298 response regulatorchromosome CDS2301671 744 - 0.569892
NA CYA_0905 acetyltransferase, GNAT familychromosome CDS915781 669 + 0.620329
NA CYA_2336 response regulatorchromosome CDS2341359 1035 + 0.607729
NA CYA_1718 transcriptional regulator, ArsR familychromosome CDS1725323 363 - 0.606061
NA CYA_1944 RelA/SpoT family proteinchromosome CDS1954758 2283 - 0.584319
NA CYA_1758 transcriptional regulator, MarR familychromosome CDS1764135 456 + 0.583333
NA CYA_0738 hypothetical proteinchromosome CDS745048 174 - 0.568965
NA CYA_0984 transcriptional regulator, LysR familychromosome CDS997798 960 + 0.621875
NA CYA_2859 serine/threonine protein kinasechromosome CDS2874783 1593 - 0.632141
NA CYA_1125 transcriptional regulator, ArsR familychromosome CDS1151589 345 + 0.571014
NA CYA_1213 exoribonuclease, VacB/RNB familychromosome CDS1223354 2052 - 0.624269
NA CYA_2337 conserved hypothetical proteinchromosome CDS2342432 318 + 0.625786
NA CYA_0162 conserved hypothetical proteinchromosome CDS158574 369 + 0.539295
NA CYA_0042 WD domain, G-beta repeat proteinchromosome CDS39584 2109 + 0.63964
NA CYA_0528 putative phycobilisome linker polypeptidechromosome CDS542537 564 + 0.625886
NA CYA_0100 GAF/SpoIIE domain proteinchromosome CDS96917 1497 + 0.619238
NA CYA_1892 DNA-binding response regulator RpaAchromosome CDS1899291 756 - 0.611111
NA CYA_2174 acetyltransferase, GNAT familychromosome CDS2190749 525 + 0.60381
NA CYA_0673 HD domain proteinchromosome CDS681136 624 - 0.641026
NA CYA_1709 aminotransferase, classes I and IIchromosome CDS1717994 1326 - 0.630468
NA CYA_0209 serine/threonine protein kinasechromosome CDS216419 1845 - 0.660705
NA CYA_1544 transcriptional regulator, MerR familychromosome CDS1551633 468 + 0.615385
NA CYA_1392 DNA-binding response regulatorchromosome CDS1398863 732 - 0.607924
NA CYA_0597 RNA polymerase sigma factor, group 3chromosome CDS608382 900 + 0.56
NA CYA_1502 hypothetical proteinchromosome CDS1510605 348 - 0.531609
NA CYA_2348 transcriptional regulator, TetR familychromosome CDS2356031 669 - 0.596413
NA CYA_2292 acetyltransferase, GNAT familychromosome CDS2295979 624 - 0.610577
NA CYA_1252 GAF domain proteinchromosome CDS1264886 1221 - 0.592957
NA CYA_2233 RNA polymerase sigma factor, ECF familychromosome CDS2248277 591 + 0.622673
NA CYA_0763 pspA/IM30 family proteinchromosome CDS770446 759 - 0.617918
NA CYA_1843 transcriptional regulator PatBchromosome CDS1842337 1653 + 0.549909
NA CYA_1293 putative type III restriction-modification system, Res subunitchromosome CDS1301518 2814 + 0.598081
NA CYA_1077 putative cell envelope-related function transcriptional attenuatorchromosome CDS1095621 1362 + 0.625551
NA CYA_0736 conserved hypothetical proteinchromosome CDS742311 909 - 0.576458
NA CYA_2635 RNA polymerase sigma factor, group 1chromosome CDS2651108 1086 + 0.603131
NA CYA_1243 RNA polymerase sigma factorchromosome CDS1254523 957 + 0.60815
NA CYA_1047 acetyltransferase, GNAT familychromosome CDS1066528 522 + 0.609195
NA CYA_1882 serine/threonine protein kinasechromosome CDS1888007 1674 + 0.644564
NA CYA_0061 RNA polymerase sigma-70 factor familychromosome CDS59792 582 - 0.580756
NA CYA_0421 DNA-binding response regulatorchromosome CDS440425 741 - 0.670715
csx3 CYA_0890 CRISPR-associated protein, Csx3 familychromosome CDS896418 921 + 0.623236
hrcA CYA_2590 heat-inducible transcription repressor HrcAchromosome CDS2611973 1179 + 0.612383
mfd CYA_1763 transcription-repair coupling factorchromosome CDS1767740 3471 - 0.60242
nrdR CYA_1083 transcriptional regulator, NrdR familychromosome CDS1104814 603 + 0.535655
nusA CYA_0457 transcription termination factor NusAchromosome CDS472535 1368 + 0.623538
nusB CYA_0350 transcription antitermination factor NusBchromosome CDS368586 867 + 0.619377
nusG CYA_1778 transcription termination/antitermination factor NusGchromosome CDS1782770 672 + 0.608631
recG CYA_2013 ATP-dependent DNA helicase RecGchromosome CDS2028491 2322 - 0.647287
rnc CYA_0804 ribonuclease IIIchromosome CDS816711 726 - 0.61708
rpoA CYA_1451 DNA-directed RNA polymerase, alpha subunitchromosome CDS1456191 996 - 0.591365
rpoB CYA_0409 DNA-directed RNA polymerase, beta subunitchromosome CDS424423 3402 + 0.620223
rpoC1 CYA_0410 DNA-directed RNA polymerase, gamma subunitchromosome CDS427924 1884 + 0.614119
rpoC2 CYA_0411 DNA-directed RNA polymerase, beta'' subunitchromosome CDS429897 3909 + 0.635457
rpoD CYA_2410 RNA polymerase sigma factor RpoDchromosome CDS2418526 1215 - 0.582716
scpB CYA_2848 segregation and condensation protein Bchromosome CDS2863854 555 + 0.601802
sufR CYA_2189 iron-sulfur cluster biosynthesis transcriptional regulator SufRchromosome CDS2208774 729 - 0.62963
ureG CYA_0606 urease accessory protein UreGchromosome CDS614688 609 + 0.591133
zam CYA_0181 acetazolamide conferring resistance protein Zamchromosome CDS179593 2286 - 0.62161