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# Neorickettsia sennetsu str. Miyayama, Miyayama

>NSE_0291 conserved hypothetical protein
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRL
YTQSDIKAIQKIQELLHKRGMTIRGARSALEGDPNQTELEMATEHLRSLR
DFLTKFAKD
>NSE_0352 ATP cone domain protein
MKCPFCGNRDTNVRDSRSVNEGTFIKRRRFCGECGAKFTTFETIQLKEIK
VIKKNGSCESFDREKAMRSVEVALRKRPVTRERVDELMNSVIYKIERIHD
AKITAKVIGELIMEELATLDKVAFIRFASVYMNFENEKDFVQLIGSLTS
>NSE_0001 chromosome partitioning protein, ParB family
MRLNENIVHLKLNEVDVNDFQPRKVFDEASIAELEESIKRNGLIQPIIVR
KFGERYKLIAGERRLRAMRNLGAETIPSIVRDFTDKTSLEVAIVENIQRK
DLTPLEEAEAYKRLIDEFNYKHVELASIVGKSRSHVTNHLRILSLPKRIK
ELLEENRISLGHVKLLTNVEDSEKMAEKIARLSLSVRQAENLLRDARKKN
NPHANKKSHELCMLEKKISERLGMKVTITDSERKNGNVKITFKNLDELQD
ILERLS
>NSE_0234 DNA-binding response regulator
MRILVVDDEQKVTDYVKSIITSVGYVCDTASCCRDASALINSSKGDYQYD
LIILDRVLPDGDGLDMILNLRCKNIKTPVIFFSALSSYENRIKAFDFGAD
DFIAKSELHKGEFLARIRAVLRRCFSHHFSKFKLGNMLVDFHMQVCKMRG
KVVQLTNKEYSMLELMCLHGRGAIISKDKFISHLYSNNEPTEQKIIDVFA
CKLRSKLAAYNDGVSYIETVWGRGYTLNENVPPIRSSVKKSKAISDGDDA
AVRTEAGHELQKSTT
>NSE_0230 DNA-binding protein
MPKISENFKKRAETDVMIGKQIRRLRTLKGYSQAAIAKEIGVTFQQLQKY
ECGANRLCVSRLLDICKFCKVSPSYFFASLNKEQEGDTLHDSENSIEFEH
ENEYNKELLVLVRAFKSITQDSVRSKVLSLVKTMSQAYGEEKDE
>NSE_0683 putative transcription termination/antitermination factor NusG
MACMSSSSDHTWCVLRVRSGSESKVCDLIKSRCSDEVVDLFSPALVKFDA
SASKRFLPGYVFVKVVPGSAFLSEISVMRSLYGIPCRFLNQAGSPKFLSD
KDIDEMRNFMLSPEVTPESGKISVGSRVAILCEYFEACVGEVDEIDERTS
KAKVKIVFCGQDVVVSFNLDQLKLVE
>NSE_0296 hypothetical protein
MDKARFFLYCCLFVVLLAFCVTGYWFYKTQSLKNNIVSTLGSFSLFEYSG
YQLEGFFEYRSRVSFTKPILKIDNLNKPLLVRFDKLIFTSAPWKNEIKVN
NPTATVVISAVDGQFHCKNIDEASISSMPAGQNGLAISIRKDNLECYLQN
KNTESDTMLFDIAFRMSYSQKNSLESTIDLTLSLGEGTKKIETDITLVNL
SERPPTYTLDVKKLDISTPEHRCNISGKMALSPGYVSIAKGKICLAVQGA
SYLLSSIEKSLDSGLTAQKVHGFLVKVRHFVDKSHDTLHICMQDKNEELV
IGTEQNMIPLLKMF
>NSE_0304 rrf2/aminotransferase, class V family protein
MSRGEYLTMLTAKTRYAIAASIDIALHSKGRKYVKTSEIASRQKISEKFL
ELILPPLKKQGILESLLGPGGGYRLAKEPDTIFLMQILKAVADTPKITRC
GGDGQQSCTGEAKKCCTHNLWVVLEKRFNNFFESVTLQDIISDDVLRQEK
NMHNGSILESHQEDIIYMDNNATATPFRYAVEKACILLKLPYNASSIHRR
GQAAREVIEEARRLIKKNLILEENYELVFTASGTEANNMLFHNASDYHHI
VCSTDHSSTLKVANNPIKVDVDENGIIKLESLKRALLENHGQKLVSLCLA
NSETGVIQPLDLIMEIAKKHGALVHTDATQAISRIYCRLNETQPDFITFS
AHKMGGIIGAGCLVYRKYLSKELKPLILGGGQERNLRSGTENLAAIAAFG
NASTFINTSIKNMKNIRSLRDYMEDEISKRMKSAVIVGQKAQRLPNTSCI
IIPEIDGTTQLMHFDMHGICVSNGSACSSGQPEASHVLLAMGFDNNMAKS
AIRISLGISNTKEEVKKLVSTWEILYNIRA
>NSE_0508 DNA-binding protein
MAYKIRKRMEEIGINARELAERAGVGKSFVYDILNGKSKNPTSKKLNSIS
RELGISISYLINVSPDSIDYENYLPVHSLDNQLGVSFLFNRTFCEEHISE
TSKLYSCTMYDDSMLPSIMPNEILIIKKFIQGDRMKSGVFLIRDKFNSIV
RSVEHIFGSQDVKITPDNEKYSTYIKHFDEIDIIGKVIFTLRRL
>NSE_0880 putative N utilization substance protein B
MPSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELL
NSILDLCLANVEADTELIGRFLSEEWEINRIDNLKLSLLRVAISELRLSS
VGQRNLVINEYVSLGGLFLSVKEVGFVNAILEKLASEIQGK
>NSE_0729 hypothetical protein
MQARYLHETQDFDSRIRTTSCKGKYAASAKTDVILSISFYMLRILAFGLC
ALILSVPLNSFAISDLHIAVDSSLSIPFRKIIKDYAQRRLMIVTADFENS
DLLSADLEKGHHAVVSIAHLGQKPELNGVPFASDKLYVCIAESSPIMGLI
GKRNSLNTVLKIAKRHSAFIVPDPGNVMGKIINDVVLKLCAGRSVRVKNF
ENLGRAAIESGAFVILPGSIAIQHESAGLTRLFEVPQELYPEIWYSITIL
ENEGINQSREFVKFLFLGEVNYSELGFYKGA
>NSE_0669 greA, transcription elongation factor GreA
MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHE
ARKEQSFVEGKIRELQLCLSEAEVIDVSQFTGERVKFGASVTLENMESKS
VLIYQIVGNLESDIKEGKISVSSPIGKAVMNKEVGEIVEIDLPSGKKTYK
ILGVEFRQS
>NSE_0521 nusA, N utilization substance protein A
MSFSNNGLSNLQIVESINSVAEKEGLSPDTLFRAIGIELAHEIGKRQYGD
HRIFVEIDKKSGEILVSKRLLVVEDSDKARMLEQMEVTTEESDDLPSSFR
AEEKVHYDGVIDLSTARLKYPSIEHKAGDIITEHLPSFSSGYIIARVMKA
KLERLITSLVREKQYHCYKGRVGEIVTGIVKKSIDFKTGSRSIIVDIAGV
EGLLPYSSLVKGESFRPGERVKCVIQKVEYSVVKPQILLSRSSGSFVAQL
FSQQVPEIYDRVVEIRKVARDAGSRSKVAVFSSDRNIDPVGACIGMGGSR
INAVVNELHGEKIDIVEYSNDTATFLANALKPIRPVKITVNEETKKIELV
VPDESVSLVIGRGGQNVYLLSSLLGYRVEVLSDAEFSKKKMEEFISGTAR
FVEALNVEEVIAQLLVTEGFSTVEEIADCNTSRLAFIEGFDKDIAEEIRS
RAVEYVNEQPKRVRALAEKYKANPNMLALSSFDTGLLEVLFSSGLTDLEK
VAELSCDELREVIGDNGFGVPLLEQLIIRSRKTLGWL
>NSE_0690 recG, ATP-dependent DNA helicase RecG
MANLFDPIDKIFLLEERMLEVVRNLVSGSRVVDLLLHKPRGFVNRCNFKA
IANSVEGEFVTIEARYEGSKEHFHRSRRVKRLHKFFFKDKNEDSLEVIFF
TKTYLQRKLKVGEWYLINGRMGVSAQMFHPDKILKLSERDKLSAFEPKYR
LSDGITNYQFLSLVDSLLKSSKPPKEWLEQTSVRKRGLISWGKAIEQLHH
PSSEVEFEQACKRLAYDEILAMHLVNNSLHTQVLNQKKEPIKGDGRITAL
LRSRLPFSLTEGQEEVIKKIYALQGQDVRMVALLQGDVGSGKTLVVIFAM
LNAVEVGKQVVLLSPTIVLAKQHFEVLQKLLPELKPVLLTGEKIACSREQ
FLQDIRSGDAKVIVATHAILAVGILFFDLGLLVIDEQHRFGANQRTKLIR
ENPGADLVLVSATPIPRTIGQVLFGSITLLNLREKPKSRPVVTTSTVTKS
KIAKLIERIKVILGKGSKVFWICPVIEESENLKVISVTERFRLLKKHFAD
EVDCVHGVLSAQKMEEKLTAFRNGKTKILLATTVVEVGVDIPDVDVIVIE
DADHFGLAQLHQLRGRVGRGNKKSFCILLYDSQKITENGKKRLKILRESS
DGFFIAEEDFKLRGVGDIFGVRQSGFYKFKFLDRPFEHSFFDSASMEAQD
AINMGRIAQYEVLIKVFFSDNNYYL
>NSE_0067 rho, transcription termination factor Rho
MTSDPEKVINLSDLRSKSARELLTMAESLNLQNLAGMSKQDLIILIAQSE
VADSQTKKVIMSSGVAEVLNEGFAFMRSSVYNYLANQDDIYISPGQVRRL
GIRTGDLIYGEVRAPKKGERYFALSKALEINNSPASVARRYVAFESLVPL
YPDTPIKLECEKSTRPVESKNCDLSGRIIDIVAPLGRGQRALIVAQPKTG
KTILLQNIAHSISANYPDIHLIILLIDERPEEVTDMRRSVNAEVVSSTFD
EPADKHVYVAEFAIEKAKRLVEQGKHVVILLDSITRLARAYNSVVPSSGK
LLSGGVDSNALQKAKRLFGAARNIEGGGSLTIIGTALVDTGSRMDELIYE
EFKGTGNSEIILDRKLAEKRLFPAIDITKSGTRKEELLLERSILNKVWVL
RRILNQMTDADAIEFIIDKLQRTKNNEEFFLFMDKKVNN
>NSE_0918 rnc, ribonuclease III
MELEELQSLLGVYFKNKDLLVEALTHPSVEKCPSYERLEFLGDAVLNLVI
ASMLYDLFPGDPEGRLSHRQSALICKNTLAMLARQMNLGDYIRLSSSEEA
GGGRDKTSNLENVLEALVGAIFLDAGLETVTCFIKKRWYGLAVQSDSIEP
NPKSTLQELLQAKGMKPPIYNVINRSGPAHLPIFEIEIRVDGKKRRATGK
SKKLGEENAARMMLEELKAETR
>NSE_0289 rpoA, DNA-directed RNA polymerase, alpha subunit
MSAVLDKGSLVDVFSSPSVVFNQIREGYCAEFIVEPLRVGFGLTIGNAMR
RVLLSSLSGFAISAVGIKGLTHEFSCIPGVREDFADLALNLKKVVLKSIS
GATCGNLHLSVTDGGAVFSNMISPSHDFEVVNGDLLICNVAEGVSLEMEM
KVSSGFGYVSSVSVRKDEYDLEGAVPIDAIYNPVRAVNFTVKPTSAGSFA
GHDKLILYVETNGAMDPKTAVLEASKILSTQARCFLNIADPEHRVHGVPC
GVSTSDRNDASDLLSARIDRLYLSARARKCLNGENIVYIRDLVSRTEADL
LKAPNFGRRSLEEVKKELFSKGLSLGMNLDSHG
>NSE_0678 rpoB, DNA-directed RNA polymerase, beta subunit
MSEFHRLYFDELLFDFPDLVKVQKDSYASFVGGGDTVFSISDIFASVFPV
NDGYGRASLEFVSCRMGEPKHDEYGCVERGITYSAPLRAILRLVVFGDET
SGEGSEGVSTEPAVKDVREQEIYMGDIPIMSKNGTFIINGVERVVVSQMH
RAPGVFFDNDKARSISGKLNYIARIIPYRGSWLDFEFDAKDVLYFRIDKK
RKLPVTFLLRALGLSNKDIFAQFCEVSECRLTKDGKWTVCFVPEKFKGVR
LQYDLINAETGELVLAKGNRISIVLARNLYAKGLRYCYMDLEVMKDMYLA
DDLVSTKGEVLLPHGTKLTKEHVAKLEFLDVDSIKLVELKGNYVFSTVLQ
YDCSYEEAMLSIYRVVRPGEIPSVESAEKLFESLFFSPERYDLLNVGRIR
LNAKFNLSHDESLTVLTKEDIFCTVKELALLQREVGDVDDIDHLGNRRVR
SVGEFMDNQFRIGLVRMAKVIVENMATADFDTVMPCEMINSKILGAVIRE
FFMSSALSQFMDQTNPLSEITHKRRISALGPGGLNRGRAGFEVRDVHTTH
YGRICATETPEGATIGLINSLAIYAKINKYGFIETPYRYVRDGRVTDEVT
YLSAIDEIKANICQASVRVDEEGYIVDDLVYCRRNYENVFIPRSEVQFAD
VSAKQIVSVAASLIPFLENDDANRALMGSNMQRQAVPLIMPEAPLVGTGM
EGYVARGSGAVIVAKRAGVVQYIDARNIVVASESKDDFWIDSYTLCKFRK
SNHNTCIHQRCVVHQGQRVKKGDILADGPAIQKGELALGRNLVVAFLSWR
GYNFEDSVVISSNVVRDDLFTSVHLEGFECVVRDTRLGPEEITRDVSGVA
EEFLHCLDEFGIACVGANVEAGDVLVGKVTPKSSSPVTPEEKLLRAIFGE
KAIDVKDSSLYLPPGVSGCVVDVKVLQRRGIEKVGRALLIEKQAIDAEKT
RRDHELAVLTNYIYSLLKEMLVGKVALSTLAPISKGDLITEEALEKIDRE
NWWKISVDGISSIKLLRQRFVDRFDEINKTYEENFEKIRGDDDLAQGVLM
VVKVFVAVKHTLQPGDKMSGRHGNKGVISRIVPAEDMPYLADGTPVDIIL
NPLGVPSRMNVGQILETHLGWAAYNLGKKISKLLDEGNYSEVKSLVLEIY
KNDRKMMARLNEMTDAEIVEYSRSLRGGVPVAASVFEGPKTDEIERLLVL
AGKDPSGQEVLYDGVTGEKFDRKVTVGCKYMLKLHHLVNDKIHARSIGSY
SLITQQPLGGKSHFGGQRFGEMECWALQAYGATFALQEMLTIKSDDVVGR
VNVYDSIVRGDNDFYYGVPESFNVMMNELRALCLNVEFCSDLEKKKDFGD
LALAASGQ
>NSE_0677 rpoC, DNA-directed RNA polymerase, beta' subunit
MGDFRSFRQNGGSSVDFDGIKISLASADKIRSLSYGEVTKPETINYRTFK
PEKNGLFCAKIFGPTKSYECLCGKYKKIKYSGVICERCGVEVTSSRVRRE
RMGHIELASPVAHIWFLKSLPSKICILLDLTLKNVEKVLYFELYIVIDPG
VTTFTKNELITDEAYMNAVREYGPDSFTAMIGAEAIRHMLASLDLEKMAV
KLRSQAAATNSEVKKKKIIKTLRLVEQFLGSDSRPVDMILDVIPVMPPDL
RPLVMLDGGRFATSDLNALYRSVINRNNRLKSLIYLKAPNIIINNERRML
QEAVDALFDNGRRAKVIKGSNKRPYKSISDMLKGKQGRFRQNLLGKRVDY
SGRSVIVVGPALELHQCGLPKKIALELFKPFIYSKLELYGIAPTIKTARR
MVQNEQPEVWDVLAKVIHQHPVFLNRAPTLHRLSVQAFEPVLIEGKAIQL
HPLVCTAFNADFDGDQMSVHVPLSIEAQVEARLLVMSTNNVLNPANSRPI
IVPSKDIVLGVYYLSLEEKGGVVHPVTFCATWEAEHAFANGDIGLHTKIR
CGIELEDGVKVYTTTFGRLQLLKILPKGVPFESINMVLTVRDISNLVDLV
YKTCGHGKTVEFADGIMELGFRYATLSGISFGKDDMVVPPTKSEHVRRAN
EEVKEYEFQYQEGLITKHEKYNKVVDAWQKCTDLVAKDMMDGISGYESVA
EMNSIFMMAQSGARGSAAQIKQLAGMRGLMAKPSGEIIPNPIISNLREGQ
GVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDSIIVEEDCGSS
NGLVVRATVEGGVVIIPLSDSIFSRVSATDIIDPSDGSVIVRAGEMFDDK
SIERIESLGIDSVRIRSVLTCKSKHGICRKCYGADLSNRKLVALGEAVGV
IAAQSVGEPGTQLTMRTFHVGGAATRRVENSSMVAFCGGKVKFTNANLIT
DRDGNYVVLSRSFEILLVDSLGIEHFQGRVQYGGTVYVKEGEVVPIGKKL
ADWDLYTVPIVAEASGTVSYADMIEGVSYNEVHDESTGILNRMVVDWRQA
ESSSGLRPRVEILDESGSVAKCQYSKDAVYLLPLGAILNVSNGDVVKAGD
VIAKITKESTTTRDITGGLPRVIELFEARKAKVNAVISEIDGYVEFAKDY
YKSKRKVIVRSREDKERIYEYLVPKGRHLIVSEGDFIRRGEPLMDGDPDL
HEILRVLGLEALAEYMISEIQRVYRLQGVKINNKHIEVIIRKMLQKVEIT
DAGDTTFLIGEQIDKSRVERINEVMASQGLRCCSYVPVLLGITRASLQTE
SFISAASFQETTKVLTEAAVAGKVDRLRGLKENIIAGRLLPVGAGYFIDK
LKREFTGERQGKQVSVGVGGDLTST
>NSE_0312 rpoD, RNA polymerase sigma factor RpoD
MTKGYSSKFHQVVKALITKGVKRGFVTYGELSDSFSDEDFENLNCIEEAI
SKLEESGIGILEKDEEDELSEEVKEEDEEEDEAADILGHTDDPVRLYLRE
MSYVKLLSRDDEVEIAKAIVAEKFESLSAVLLFPSVLKSIVNLGTKLREC
TISLREVIESDSGLKSELTEETGKGDDLFEGMDGKPEEGNQMSDEELMEK
VLDIFGELETIITSALDKAKEGQMVKIVDGEVILDPEYRELHTLAVNHLN
QVKLNPKLLAEFFENTRKKNELILEKKKVLLTFLEEHGLDRTVLIKGKVH
ILDAVVLSELLKEHNICDTHFSLEEFLSPIRELEKNEGMDYRSISFLTRK
VATHLDNANAAKHRMVEANLRLVISIAKKYTNRGMPFPDLIQEGNIGLMK
AVDKFDHRRGHKFSTYATWWCRQAITRAIADCGSIVRKPVHIHETANKVM
RTRRRLYNLNGREPTVEEIANLLKISPDKVKKSLKVNQDPISLESPVGDD
SNSGSFGDFIEDKNAVSQVDVVLSKNLRKVLDEALAMLSPREEKILRYRF
GLCNSVHSPEDEHYLKSLKIDLNRGTNLTLEQVGILYNVTRERIRQIESK
SLRKMRSPSRSIKLRTFLKY
>NSE_0341 rpoH, RNA polymerase sigma-32 factor
MRELLLPVDNSEFDAYARKILAIPILQEEEERELIDRWFVHRDISAAQRL
VEAYLRLVVKVTVRFRNYGFPLMDLASEGNIGLMKAIKNFNPTLGHGIAT
YAIWWIKAAINEYVIRSWSMVKIGTTAAQRRLFFNLRKLKNSGSVAGLDE
NQVVKRISEILAVSKNDVEEMERILNARDVSLNMQLGEDDSSEVHDLVPF
PEANQEAVLLETQERQMKSQLLYEAVEALEARHKEIFVARSLSAVPRTLK
ELGEKFSISQERVRQIHARAMKKVTEYVEKHGRKLGIV
>NSE_0039 rpoZ, DNA-directed RNA polymerase, omega subunit
MRDWRFFEDGNLSCSRFELVILASQRAYDLQSGSLPDVQHEESDKSPVIA
LKELYSLSMDYEKLFHAAIRRIVHFSGSGYAGISSDSGAARPHARGLVEH
IDHDLVEERDSEVFSDSEFSFAEDEGDE