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2024-05-03 14:43:02

Gene list

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COG category: Transcription
Organism: Bacteriophage Sal3

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacteriophage Sal3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSL_0163 Transcription regulator of fructose operonchromosome CDS187630 756 + 0.353175
NA LSL_0180 Transcriptional regulator, LytR familychromosome CDS206783 1083 - 0.354571
NA LSL_0079 Transcriptional regulator, MerR familychromosome CDS99569 447 + 0.310962
NA LSL_0314 Transcriptional regulator, MerR familychromosome CDS343478 399 + 0.320802
NA LSL_0247 Dna binding protein, phage associatedchromosome CDS296306 192 + 0.296875
NA LSL_1316 Transcriptional regulator, TetR familychromosome CDS1363609 534 - 0.338951
NA LSL_1506 Transcriptional regulator, MarR familychromosome CDS1561811 312 + 0.326923
NA LSL_1193 Phage immunity repressorchromosome CDS1230943 381 + 0.278215
NA LSL_1646 Transcriptional regulator, MarR familychromosome CDS1733396 483 - 0.329193
NA LSL_0834 Transcriptional regulator, DeoR familychromosome CDS852396 753 + 0.341301
NA LSL_1161 Two-component response regulatorchromosome CDS1194978 720 - 0.323611
NA LSL_1622 Transcriptional regulator, Cro/CI familychromosome CDS1707202 411 - 0.347932
NA LSL_0178 Transcriptional regulator, MarR familychromosome CDS204794 414 + 0.263285
NA LSL_0146 Transcriptional regulators, LysR familychromosome CDS164531 879 - 0.326507
NA LSL_1263 Transcriptional regulator, GntR familychromosome CDS1293840 699 - 0.32475
NA LSL_0222 Transcriptional regulator, TetR familychromosome CDS275988 648 + 0.294753
NA LSL_0035 Two-component response regulatorchromosome CDS43139 711 + 0.369902
NA LSL_1461 Fructokinasechromosome CDS1521868 867 - 0.369089
NA LSL_0491 Putative regulatory proteinchromosome CDS540683 474 + 0.362869
NA LSL_0020 Transcriptional regulator, TetR familychromosome CDS24679 567 + 0.326279
NA LSL_0522 Two-component response regulatorchromosome CDS567551 687 + 0.343523
NA LSL_1667 Transcriptional regulator, TetR familychromosome CDS1746394 615 - 0.310569
NA LSL_0812 Transcriptional regulator, MarR familychromosome CDS828491 348 + 0.344828
NA LSL_0031 Transcriptional regulator, MarR familychromosome CDS38074 450 + 0.282222
NA LSL_0612 DNA-directed RNA polymerase omega chainchromosome CDS652224 198 + 0.318182
NA LSL_1708 Transcriptional regulator, ArsR familychromosome CDS1789491 360 + 0.35
NA LSL_0972 Transcription regulatorchromosome CDS990859 462 - 0.365801
NA LSL_1581 Transcriptional regulator, MerR familychromosome CDS1663807 390 + 0.374359
NA LSL_0205 Two-component response regulatorchromosome CDS248688 690 + 0.32029
NA LSL_0674 Transcriptional regulators, LysR familychromosome CDS722513 888 + 0.307432
NA LSL_1191 Phage transcriptional regulator, Cro/CI familychromosome CDS1230097 498 - 0.311245
NA LSL_0874 Transcriptional regulator, MarR familychromosome CDS899752 432 + 0.284722
NA LSL_0076 Transcriptional regulator, DeoR familychromosome CDS94842 777 + 0.330759
NA LSL_1477 Transcriptional regulator, LytR familychromosome CDS1535689 1137 - 0.343887
NA LSL_0242 cI-like repressor, phage associatedchromosome CDS293709 777 - 0.328185
NA LSL_0211 Transcriptional regulator, TetR familychromosome CDS259832 651 + 0.268817
NA LSL_1180 Stress-responsive transcriptional regulator PspCchromosome CDS1217131 339 - 0.286136
NA LSL_0873 Fibronectin-binding protein / Fibrinogen-binding proteinchromosome CDS897877 1689 - 0.305506
NA LSL_1167 Central glycolytic genes regulatorchromosome CDS1201618 1029 - 0.392614
NA LSL_1635 Hypothetical proteinchromosome CDS1721748 525 - 0.304762
NA LSL_0450 Transcriptional regulator, MarR familychromosome CDS499199 441 + 0.312925
NA LSL_1318 CopAB ATPases metal-fist type repressorchromosome CDS1364738 447 - 0.342282
NA LSL_1338 DNA-binding proteinchromosome CDS1388643 612 - 0.310458
NA LSL_1682 Transcriptional regulator, MarR familychromosome CDS1764691 357 + 0.344538
NA LSL_1438 Transcriptional regulator, RpiR familychromosome CDS1498209 837 - 0.311828
NA LSL_0832 Transcriptional regulators, LysR familychromosome CDS850307 957 + 0.31139
NA LSL_1156 Ribonuclease R 1chromosome CDS1187766 2400 - 0.329583
NA LSL_0959 Hypothetical proteinchromosome CDS981762 408 - 0.318627
NA LSL_0183 Transcriptional regulators, LysR familychromosome CDS209213 858 + 0.311189
NA LSL_1649 Transcriptional regulator, Cro/CI familychromosome CDS1736463 804 - 0.237562
NA LSL_1008 Transcriptional regulator, AraC familychromosome CDS1025573 837 + 0.329749
NA LSL_0552 Glucokinasechromosome CDS592926 963 + 0.354102
NA LSL_0045 Hypothetical proteinchromosome CDS52274 393 + 0.335878
NA LSL_0723 Transcriptional regulator, TetR familychromosome CDS770017 618 - 0.297735
NA LSL_1617 Transcriptional regulator, GntR familychromosome CDS1702209 369 - 0.319783
NA LSL_1182 Alkaline phosphatase synthesis two-component response regulator phoPchromosome CDS1218867 702 - 0.316239
NA LSL_1733 Transcriptional Regulator, LysR substrate bindingchromosome CDS1821643 879 - 0.290102
NA LSL_0711 Transcriptional regulator, MerR familychromosome CDS758214 462 + 0.322511
NA LSL_1551 Transcriptional regulator, LytR familychromosome CDS1630765 975 - 0.328205
NA LSL_1640 Transcriptional regulator, ArsR familychromosome CDS1728560 351 + 0.307692
NA LSL_1711 Transcriptional regulator, LacI familychromosome CDS1792554 993 - 0.303122
NA LSL_0083 Two-component response regulatorchromosome CDS102593 657 - 0.350076
NA LSL_1688 Transcriptional regulator, TetR familychromosome CDS1769289 594 - 0.340067
NA LSL_1441 Hypothetical proteinchromosome CDS1500879 393 - 0.315522
NA LSL_0413 Transcriptional regulator, ArsR familychromosome CDS457759 336 + 0.321429
NA LSL_0742 Phage transcriptional regulator, Cro/CI familychromosome CDS785426 396 - 0.323232
NA LSL_1207 ComF operon protein 1chromosome CDS1239115 1338 - 0.301196
NA LSL_1315 Transcriptional regulator, MarR familychromosome CDS1362833 435 - 0.296552
NA LSL_1314 Malolactic regulator, LysR familychromosome CDS1361886 882 + 0.309524
NA LSL_0883 Conserved hypothetical proteinchromosome CDS908093 606 - 0.323432
NA LSL_0105 Transcriptional regulator, PadR familychromosome CDS122941 321 + 0.311526
NA LSL_0939 Segregation and condensation protein ScpBchromosome CDS968156 591 - 0.348562
NA LSL_1677 Transcriptional regulator, TetR familychromosome CDS1758783 558 + 0.256272
NA LSL_0108 Stress-responsive transcriptional regulator PspCchromosome CDS124856 231 + 0.324675
NA LSL_0752 Phage helicasechromosome CDS788674 1224 + 0.293301
NA LSL_1508 Transcription regulator, GntR familychromosome CDS1563310 726 + 0.300275
NA LSL_1275 Transcriptional regulatorchromosome CDS1311958 795 - 0.293082
ccpA LSL_0420 Catabolite control protein Achromosome CDS463530 1008 + 0.328373
cro LSL_0250 Cro-like protein, phage associatedchromosome CDS296879 192 + 0.296875
cspC LSL_1069 Cold shock proteinchromosome CDS1091569 210 - 0.328571
cspC LSL_1480 Cold shock proteinchromosome CDS1538345 201 - 0.378109
galR LSL_0380 Galactose operon repressorchromosome CDS415063 999 - 0.326326
glnR LSL_0557 Glutamine synthetase repressorchromosome CDS597020 387 + 0.338501
greA LSL_0817 Transcription elongation factorchromosome CDS834627 471 + 0.335456
greA LSL_0121 Transcription elongation factorchromosome CDS138486 474 - 0.348101
hrcA LSL_0576 Heat-inducible transcription repressorchromosome CDS617893 1053 + 0.332384
lexA LSL_0540 LexA repressorchromosome CDS583018 621 - 0.351047
malR LSL_1283 Maltose operon transcriptional repressorchromosome CDS1322875 996 - 0.295181
mfd LSL_1360 Transcription-repair coupling factorchromosome CDS1422969 3525 - 0.32539
nusA LSL_0569 N utilization substance protein Achromosome CDS611433 1128 + 0.333333
nusB LSL_0532 N utilization substance protein Bchromosome CDS576129 396 + 0.272727
nusG LSL_1241 Transcription antitermination proteinchromosome CDS1273402 561 - 0.327986
parB LSL_1596 Chromosome partitioning protein, DNA-binding proteinchromosome CDS1676145 876 - 0.332192
parB LSL_1598 Chromosome partitioning proteinchromosome CDS1677795 843 - 0.338078
recG LSL_0622 ATP-dependent DNA helicasechromosome CDS665280 2031 + 0.328902
relA LSL_0822 GTP pyrophosphokinasechromosome CDS839012 2220 + 0.32973
rho LSL_0346 Transcription termination factorchromosome CDS376785 1284 + 0.350467
rnc LSL_0625 Ribonuclease IIIchromosome CDS668797 699 + 0.323319
rpoA LSL_1409 DNA-directed RNA polymerase alpha chainchromosome CDS1482888 945 - 0.354497
rpoB LSL_0197 DNA-directed RNA polymerase beta chainchromosome CDS235025 3600 + 0.374722
rpoC LSL_0198 DNA-directed RNA polymerase beta' chainchromosome CDS238653 3666 + 0.382433
rpoD LSL_0909 RNA polymerase sigma factorchromosome CDS932755 1119 - 0.362824
rpoE LSL_0341 DNA-directed RNA polymerase delta chainchromosome CDS372021 591 + 0.37225
scrR LSL_0064 Sucrose operon repressorchromosome CDS79497 993 - 0.327291
srmB LSL_1112 ATP-dependent RNA helicasechromosome CDS1139922 1323 - 0.343915
srmB LSL_1286 ATP-dependent RNA helicasechromosome CDS1326739 1281 - 0.330211
srmB LSL_0356 ATP-dependent RNA helicasechromosome CDS389363 1479 + 0.354293
treR LSL_1513 Trehalose operon transcriptional repressorchromosome CDS1570096 714 + 0.337535
troR LSL_1481 Iron-dependent repressorchromosome CDS1538693 648 - 0.342593
wecD LSL_1673 Acetyltransferasechromosome CDS1753481 519 - 0.317919
wecD LSL_1012 Acetyltransferase, GNAT familychromosome CDS1029459 441 - 0.310658
wecD LSL_0966 Acetyltransferasechromosome CDS986058 513 - 0.337232
wecD LSL_1299 Acetyltransferase, GNAT familychromosome CDS1346071 483 - 0.341615
wecD LSL_0998 Acetyltransferase, GNAT familychromosome CDS1016191 516 - 0.319767
wecD LSL_1336 Acetyltransferasechromosome CDS1387947 369 - 0.322493