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2024-04-29 11:00:06

Gene list

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COG category: Transcription
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 148

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_0091 transcription-repair coupling factorchromosome CDS107317 3486 - 0.62794
NA Pcar_0140 ATP-dependent transcriptional regulator-likechromosome CDS172516 2934 + 0.579073
NA Pcar_1159 sigma 28 (Flagella/Sporulation)chromosome CDS1355216 768 - 0.580729
NA Pcar_2839 transcriptional regulator, ArsR familychromosome CDS3319418 282 + 0.514184
NA Pcar_2519 transcriptional regulator, LysR familychromosome CDS2963750 900 + 0.624444
NA Pcar_2878 transcriptional regulator, TetR familychromosome CDS3364053 609 - 0.500821
NA Pcar_3124 sigma-24 (FecI-like)chromosome CDS3642902 645 - 0.55969
NA Pcar_0902 putative transcriptional regulator, Fis familychromosome CDS1064458 2019 - 0.551758
NA Pcar_1083 transcriptional regulator, AraC familychromosome CDS1271635 945 + 0.579894
NA Pcar_1402 L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT familychromosome CDS1647364 837 + 0.543608
NA Pcar_1730 Rrf2 family proteinchromosome CDS2023407 468 + 0.510684
NA Pcar_0312 response regulator receiver domain protein (CheY-like)chromosome CDS392298 729 + 0.539095
NA Pcar_2312 putative transcriptional regulator, Fis familychromosome CDS2698510 2244 + 0.594474
NA Pcar_0104 transcriptional regulator, CarD familychromosome CDS125632 486 - 0.487654
NA Pcar_0423 Rrf2 family proteinchromosome CDS516622 465 - 0.548387
NA Pcar_0751 putative transcriptional regulator, Fis familychromosome CDS889161 1335 - 0.578277
NA Pcar_1300 putative transcriptional regulatorchromosome CDS1521560 603 + 0.590381
NA Pcar_0518 conserved hypothetical proteinchromosome CDS627458 1164 + 0.507732
NA Pcar_1036 putative transcriptional regulator, AsnC familychromosome CDS1213715 366 + 0.521858
NA Pcar_2183 transcriptional regulator, MerR familychromosome CDS2549234 807 + 0.488228
NA Pcar_0109 negative regulator of class I heat shock proteinchromosome CDS132059 1074 - 0.567039
NA Pcar_0672 serine phosphatasechromosome CDS814989 765 + 0.546405
NA Pcar_2176 transcriptional regulator, LysR familychromosome CDS2541760 900 + 0.555556
NA Pcar_2112 acetyltransferase, GNAT familychromosome CDS2461584 843 + 0.580071
NA Pcar_1553 NusA antitermination factorchromosome CDS1817979 1221 + 0.551188
NA Pcar_0440 transcriptional regulator, TetR familychromosome CDS535655 612 + 0.503268
NA Pcar_2311 transcriptional regulator containing an HTH domain fused to a Zn-ribbon-likechromosome CDS2697996 351 + 0.54416
NA Pcar_2382 sigma 32 (RpoH)chromosome CDS2806039 861 + 0.538908
NA Pcar_0862 transcriptional regulator, AraC familychromosome CDS1015183 918 + 0.555556
NA Pcar_0889 conserved protein (RRF2 family protein)chromosome CDS1047056 399 - 0.533835
NA Pcar_3028 conserved hypothetical proteinchromosome CDS3539766 477 + 0.584906
NA Pcar_0070 hypothetical proteinchromosome CDS86368 309 - 0.530744
NA Pcar_1595 transcriptional regulator, MerR familychromosome CDS1862310 414 - 0.567633
NA Pcar_2182 transcriptional regulator, MerR familychromosome CDS2547938 804 + 0.488806
NA Pcar_2500 transcriptional regulator-likechromosome CDS2939501 732 + 0.506831
NA Pcar_1457 transcriptional regulator, XRE familychromosome CDS1701564 567 - 0.495591
NA Pcar_1990 Signal transduction histidine kinase regulating C4-dicarboxylate transport system-likechromosome CDS2319732 1974 - 0.456434
NA Pcar_0689 NusG antitermination factorchromosome CDS837144 534 + 0.546816
NA Pcar_2239 transcriptional regulator, GntR familychromosome CDS2613223 732 + 0.635246
NA Pcar_1456 transcriptional regulator, XRE familychromosome CDS1700960 567 - 0.513228
NA Pcar_1449 NusB antitermination factorchromosome CDS1694090 471 + 0.543524
NA Pcar_2930 transposon Tn7 transposition protein TnsCchromosome CDS3424371 1593 - 0.508475
NA Pcar_1609 ATP-dependent DNA helicase RecGchromosome CDS1879696 2154 - 0.531105
NA Pcar_0735 ATP-dependent RNA helicase RhlBchromosome CDS872856 1302 + 0.549155
NA Pcar_0368 ATP-dependent RNA helicase RhlEchromosome CDS457280 1308 + 0.594801
NA Pcar_1268 Mn2+-dependent serine/threonine protein kinasechromosome CDS1489053 1401 + 0.556745
NA Pcar_1400 transcriptional regulator, LuxR familychromosome CDS1644614 645 + 0.460465
NA Pcar_1425 transcriptional regulator, MerR familychromosome CDS1673634 351 + 0.498576
NA Pcar_0436 transcriptional regulator, TetR familychromosome CDS530052 582 + 0.584192
NA Pcar_1151 putative anti-sigma-28 factor, FlgMchromosome CDS1348972 300 - 0.546667
NA Pcar_0631 NAD-dependent protein deacetylases SIR2 family-likechromosome CDS759011 837 + 0.574671
NA Pcar_0695 probable DNA-directed RNA polymerase, beta' subunitchromosome CDS844349 4191 + 0.542353
NA Pcar_2894 hypothetical proteinchromosome CDS3381372 1134 - 0.613757
NA Pcar_1287 GTP pyrophosphokinasechromosome CDS1507741 2157 + 0.541493
NA Pcar_0940 transcriptional regulator, DeoR familychromosome CDS1109108 828 - 0.577295
NA Pcar_1094 transcriptional regulator, XRE familychromosome CDS1287070 255 - 0.603922
NA Pcar_1430 cyano sigma factorschromosome CDS1677244 1044 + 0.505747
NA Pcar_0759 transcriptional regulator, IclR familychromosome CDS898741 786 - 0.534351
NA Pcar_0653 response regulator receiver domain protein (CheY-like)chromosome CDS788857 693 + 0.582973
NA Pcar_2639 transcriptional regulator, LysR familychromosome CDS3091221 894 + 0.497763
NA Pcar_0183 transcriptional regulator, ArsR familychromosome CDS230833 357 + 0.492997
NA Pcar_2561 GreA/GreB family elongation factorchromosome CDS3008279 558 - 0.557348
NA Pcar_3081 response regulator receiver domain protein (CheY-like)chromosome CDS3594200 672 + 0.529762
NA Pcar_1938 sigma-54 (RpoN)chromosome CDS2252466 1458 - 0.516461
NA Pcar_0328 ATP-dependent RNA helicase DeaDchromosome CDS410936 1752 + 0.593037
NA Pcar_2695 transcription termination factor Rhochromosome CDS3146620 1248 - 0.557692
NA Pcar_3086 response regulator receiver domain protein (CheY-like)chromosome CDS3600556 750 + 0.566667
NA Pcar_0778 cold-shock DNA-binding domain proteinchromosome CDS922602 201 + 0.467662
NA Pcar_1387 probable acetyltransferasechromosome CDS1628872 525 + 0.500952
NA Pcar_2466 response regulator receiver domain protein (CheY-like)chromosome CDS2903991 723 + 0.558783
NA Pcar_1597 transcriptional regulator, LysR familychromosome CDS1865433 927 - 0.500539
NA Pcar_0766 response regulator receiver domain protein (CheY-like)chromosome CDS907459 366 + 0.551913
NA Pcar_2670 transcriptional regulator, MarR familychromosome CDS3122081 444 + 0.529279
NA Pcar_0584 transcriptional regulators-likechromosome CDS708046 411 - 0.615572
NA Pcar_1599 transcriptional regulator, GntR family/aminotransferase class-Ichromosome CDS1867467 1428 - 0.481793
NA Pcar_0912 putative ArsR family transcriptional regulatorchromosome CDS1078436 660 + 0.421212
NA Pcar_2436 hypothetical proteinchromosome CDS2867875 399 - 0.548872
NA Pcar_0666 transcriptional regulator, TetR familychromosome CDS806777 618 + 0.569579
NA Pcar_1403 ribonuclease IIIchromosome CDS1648653 699 + 0.536481
NA Pcar_2730 putative transcriptional regulatorchromosome CDS3189249 1659 - 0.537071
NA Pcar_0047 transcriptional regulator, ArsR familychromosome CDS56482 339 + 0.581121
NA Pcar_3123 putative transmembrane transcriptional regulator (anti-sigma factor)chromosome CDS3642456 450 - 0.564444
NA Pcar_0768 response regulator receiver domain protein (CheY-like)chromosome CDS908660 594 - 0.590909
NA Pcar_1454 fibronectin/fibrinogen-binding proteinchromosome CDS1698631 1701 + 0.54321
NA Pcar_0694 DNA-directed RNA polymerase, beta subunitchromosome CDS840144 4107 + 0.527636
NA Pcar_0071 transcriptional regulator, LysR familychromosome CDS86795 879 + 0.598407
NA Pcar_0056 response regulator receiver domain protein (CheY-like)chromosome CDS68688 708 + 0.497175
NA Pcar_3096 transcriptional regulator, TetR familychromosome CDS3613497 609 + 0.513957
NA Pcar_0201 cold-shock DNA-binding domain proteinchromosome CDS259184 201 + 0.527363
NA Pcar_1409 response regulator receiver domain protein (CheY-like)chromosome CDS1657374 372 + 0.502688
NA Pcar_0372 cold-shock DNA-binding domain proteinchromosome CDS460700 201 + 0.527363
NA Pcar_3039 hypothetical proteinchromosome CDS3552099 594 - 0.454545
NA Pcar_0336 putative transcriptional regulator, Fis familychromosome CDS419684 2055 + 0.575669
NA Pcar_2105 conserved hypothetical proteinchromosome CDS2454479 687 + 0.580786
NA Pcar_1507 ROK family proteinchromosome CDS1760865 960 + 0.577083
NA Pcar_0728 DNA-directed RNA polymerase, alpha subunitchromosome CDS866373 1017 + 0.486726
NA Pcar_0804 conserved hypothetical proteinchromosome CDS949574 441 + 0.594104
NA Pcar_2908 hypothetical proteinchromosome CDS3395552 477 - 0.513627
NA Pcar_1751 flp pilus assembly protein, ATPasechromosome CDS2048257 1179 + 0.498728
NA Pcar_1243 transcriptional regulator, XRE familychromosome CDS1460296 555 - 0.52973
NA Pcar_1925 transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 familychromosome CDS2241484 921 - 0.570033
NA Pcar_1834 serine phosphatasechromosome CDS2148159 1176 + 0.570578
NA Pcar_1734 putative transcriptional regulator, Fis familychromosome CDS2028345 2049 - 0.54368
NA Pcar_1950 iron-dependent repressor, putativechromosome CDS2268366 657 - 0.537291
NA Pcar_0955 conserved hypothetical proteinchromosome CDS1123905 972 + 0.564815
NA Pcar_1088 conserved hypothetical proteinchromosome CDS1277587 351 + 0.541311
NA Pcar_1861 Rrf2 family proteinchromosome CDS2176203 444 - 0.565315
NA Pcar_1269 Mn2+-dependent serine/threonine protein kinasechromosome CDS1490453 759 + 0.552042
NA Pcar_2806 cold-shock DNA-binding domain proteinchromosome CDS3273717 258 - 0.476744
NA Pcar_0122 conserved hypothetical proteinchromosome CDS150751 939 + 0.440895
NA Pcar_0978 transcriptional regulator, LuxR familychromosome CDS1149722 672 - 0.543155
NA Pcar_0831 transcriptional regulator, LysR familychromosome CDS980384 897 + 0.587514
NA Pcar_1661 hypothetical proteinchromosome CDS1941535 384 + 0.484375
NA Pcar_0503 transcriptional regulatorchromosome CDS614129 276 + 0.471014
NA Pcar_1064 bifunctional enzyme (p)ppgpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyrochromosome CDS1250715 1434 + 0.565551
NA Pcar_0813 transcriptional regulator, TetR familychromosome CDS959890 684 + 0.532164
NA Pcar_1970 putative transcriptional acitvator, Bafchromosome CDS2292599 768 - 0.550781
NA Pcar_3138 parB-like domain proteinchromosome CDS3657390 855 - 0.519298
NA Pcar_0286 transcriptional regulator, TetR familychromosome CDS355641 561 + 0.500891
NA Pcar_0782 transcriptional regulator, MarR familychromosome CDS926290 489 + 0.437628
NA Pcar_2913 transcriptional regulator, MarR familychromosome CDS3401129 438 - 0.511416
NA Pcar_0963 putative transcriptional regulator, CopG familychromosome CDS1132923 243 - 0.580247
NA Pcar_0908 S1 RNA binding domain proteinchromosome CDS1072112 2280 + 0.602193
NA Pcar_1286 DNA-directed RNA polymerase, omega subunitchromosome CDS1507261 207 + 0.521739
NA Pcar_2629 response regulator receiver domain protein (CheY-like)chromosome CDS3081033 717 - 0.612273
NA Pcar_2838 rtcR, RSc0222; probable sigma-54 interacting transcription regulator proteinchromosome CDS3317665 1593 + 0.608286
NA Pcar_1444 ATP cone domain proteinchromosome CDS1689591 474 + 0.506329
NA Pcar_1580 putative transcriptional regulator, Fis familychromosome CDS1848437 1395 + 0.536918
NA Pcar_2152 ribonuclease R, putativechromosome CDS2505594 2163 - 0.551549
NA Pcar_1404 radical SAM domain proteinchromosome CDS1649442 1038 + 0.55395
NA Pcar_0974 hypothetical proteinchromosome CDS1145165 282 - 0.514184
NA Pcar_1089 transcriptional regulator, LysR familychromosome CDS1278004 903 - 0.496124
NA Pcar_1091 transcriptional regulator, AraC familychromosome CDS1280121 924 - 0.587662
NA Pcar_2946 transcriptional regulator, XRE familychromosome CDS3451520 594 - 0.558923
NA Pcar_1739 transcriptional repressor of the SOS regulonchromosome CDS2034960 609 + 0.602627
NA Pcar_1611 GreA/GreB family elongation factorchromosome CDS1882117 477 - 0.498952
NA Pcar_3004 transcriptional regulator, MarR familychromosome CDS3515334 420 - 0.542857
NA Pcar_0570 ATP-dependent RNA helicase RhlEchromosome CDS694183 1299 + 0.599692
NA Pcar_1726 response regulator receiver domain protein (CheY-like)chromosome CDS2019757 684 - 0.538012
NA Pcar_1219 transcriptional regulator, putativechromosome CDS1428154 1011 + 0.589515
NA Pcar_2370 cold-shock DNA-binding domain proteinchromosome CDS2791866 201 - 0.482587
NA Pcar_2774 sigma-54 dependent transcriptional regulatorchromosome CDS3233588 1476 - 0.571138
NA Pcar_2678 sigma 38 (RpoS)chromosome CDS3129423 1767 - 0.555744
NA Pcar_1178 PBS lyase heat-like repeat proteinchromosome CDS1378807 2160 + 0.510185
NA Pcar_1786 transcriptional regulator, XRE familychromosome CDS2088738 375 - 0.6
NA Pcar_0360 response regulator receiver domain protein (CheY-like)chromosome CDS449002 675 - 0.543704
NA Pcar_2094 transcriptional regulator, XRE familychromosome CDS2441730 567 + 0.555556
NA Pcar_0023 ATP-dependent helicase DinGchromosome CDS24332 2556 + 0.614241