TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-09-21 01:57:21

Gene list

Applied filters:

COG category: Transcription
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901

Number of genes found: 129

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Carboxydothermus hydrogenoformans Z-2901, Z-2901
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CHY_1098 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; chromosome CDS971975 330 - 0.415152
NA CHY_2446 rrf2 family proteinSubName: Full=Rrf2 family protein; chromosome CDS2191706 432 - 0.481481
NA CHY_0606 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS525167 681 + 0.418502
NA CHY_2098 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1881792 420 - 0.42381
NA CHY_1696 prophage LambdaCh01, transcriptional regulator, PBSX familySubName: Full=Prophage LambdaCh01, transcriptional regulator, PBSX family; chromosome CDS1513101 231 - 0.380952
NA CHY_1908 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS1709489 324 + 0.342593
NA CHY_2622 transcriptional regulator, AbrB familySubName: Full=Transcriptional regulator, AbrB family; chromosome CDS2330815 255 + 0.411765
NA CHY_1413 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS1265186 687 - 0.419214
NA CHY_1768 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1581676 279 - 0.415771
NA CHY_1359 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1216772 1722 + 0.355401
NA CHY_1254 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1116505 1893 + 0.354992
NA CHY_0910 transcriptional regulator, truncationSubName: Full=Transcriptional regulator, truncation; chromosome CDS804004 399 + 0.365915
NA CHY_1547 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1383255 2199 - 0.386539
NA CHY_0839 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS747332 522 + 0.475096
NA CHY_1092 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; chromosome CDS967264 378 + 0.396825
NA CHY_1865 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS1672073 795 - 0.415094
NA CHY_0628 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS541344 906 - 0.39404
NA CHY_1343 putative serine/threonine protein kinaseSubName: Full=Putative serine/threonine protein kinase; chromosome CDS1201771 2295 + 0.35512
NA CHY_2047 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS1833209 696 - 0.41092
NA CHY_1706 transcriptional regulator, MerR familySubName: Full=Transcriptional regulator, MerR family; chromosome CDS1520674 393 - 0.424936
NA CHY_1870 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS1677006 477 - 0.350105
NA CHY_0859 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; chromosome CDS762097 360 + 0.411111
NA CHY_0010 stage 0 sporulation protein JSubName: Full=Stage 0 sporulation protein J; chromosome CDS7237 861 + 0.439024
NA CHY_0434 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS376765 696 + 0.400862
NA CHY_2200 rrf2 family proteinSubName: Full=Rrf2 family protein; chromosome CDS1981246 447 - 0.449664
NA CHY_0715 helix-turn-helix protein, CopG familySubName: Full=Helix-turn-helix protein, CopG family; chromosome CDS633211 255 + 0.368627
NA CHY_0788 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS695585 1842 + 0.431596
NA CHY_2052 conserved hypothetical protein TIGR00244RecName: Full=Transcriptional repressor NrdR; chromosome CDS1838835 465 - 0.412903
NA CHY_1400 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1254870 225 + 0.351111
NA CHY_1527 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1363314 906 - 0.379691
NA CHY_0549 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS478421 216 + 0.398148
NA CHY_2529 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2261371 804 - 0.466418
NA CHY_1845 putative RNA polymerase sigma-W factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1654656 531 + 0.34275
NA CHY_2218 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS2002221 756 - 0.387566
NA CHY_2398 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS2147567 942 - 0.40552
NA CHY_2097 peptidase, homologSubName: Full=Peptidase, homolog; chromosome CDS1880852 939 - 0.367412
NA CHY_2591 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS2308337 1341 - 0.43997
NA CHY_0092 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS79413 705 + 0.442553
NA CHY_2426 RNA polymerase sigma-70 factor, ECF subfamilySubName: Full=RNA polymerase sigma-70 factor, ECF subfamily; chromosome CDS2172912 432 - 0.414352
NA CHY_2370 puatative transcriptional activator, Baf familyRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS2124536 774 - 0.421189
NA CHY_0229 ATP-dependent RNA helicase, DEAD box familySubName: Full=ATP-dependent RNA helicase, DEAD box family; chromosome CDS196711 1293 + 0.481052
NA CHY_2091 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1875592 1551 - 0.422953
NA CHY_0507 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS439658 531 + 0.382298
NA CHY_1114 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS988932 444 - 0.466216
NA CHY_0141 putative GTP-sensing transcriptional pleiotropic repressor CodYRecName: Full=GTP-sensing transcriptional pleiotropic repressor CodY; chromosome CDS123303 744 + 0.443548
NA CHY_1519 RNA polymerase sigma factorSubName: Full=RNA polymerase sigma factor; chromosome CDS1358224 639 - 0.374022
NA CHY_1605 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1443764 597 - 0.355109
NA CHY_2030 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1813870 582 + 0.40378
NA CHY_1376 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS1233553 1443 - 0.372141
NA CHY_0550 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS478753 774 + 0.410853
NA CHY_0924 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS815116 864 - 0.324074
NA CHY_1915 transcriptional regulator, AbrB familySubName: Full=Transcriptional regulator, AbrB family; chromosome CDS1715350 210 - 0.433333
NA CHY_0209 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS174745 234 + 0.42735
NA CHY_2125 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1907402 981 - 0.383282
NA CHY_2575 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS2294325 909 + 0.454345
NA CHY_1273 transcriptional regulator, IclR familySubName: Full=Transcriptional regulator, IclR family; chromosome CDS1133418 786 + 0.388041
NA CHY_0225 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS194083 624 + 0.471154
NA CHY_0446 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS392914 372 + 0.400538
NA CHY_1125 response regulatorSubName: Full=Response regulator; chromosome CDS998499 618 + 0.412621
NA CHY_0114 transcriptional regulator, AsnC familySubName: Full=Transcriptional regulator, AsnC family; chromosome CDS97267 483 + 0.428571
NA CHY_0677 transcriptional regulator, MerR familySubName: Full=Transcriptional regulator, MerR family; chromosome CDS592764 825 + 0.460606
NA CHY_1317 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1172649 657 + 0.327245
NA CHY_0143 RNA polymerase sigma-70 factorSubName: Full=RNA polymerase sigma-70 factor; chromosome CDS124319 528 + 0.448864
NA CHY_2210 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1992035 657 - 0.412481
NA CHY_2344 transcriptional regulator, CarD familySubName: Full=Transcriptional regulator, CarD family; chromosome CDS2100091 483 - 0.391304
NA CHY_2009 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1793582 417 - 0.41247
NA CHY_2567 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS2287096 711 - 0.376934
NA CHY_1318 sigma-54-dependent transcriptional regulatorSubName: Full=Sigma-54-dependent transcriptional regulator; chromosome CDS1173289 1770 + 0.310169
NA CHY_0059 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS48186 909 - 0.349835
NA CHY_1367 C4-dicarboxylate response regulatorRecName: Full=Transcriptional regulatory protein; chromosome CDS1225091 663 - 0.396682
NA CHY_2124 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1905956 1374 - 0.299854
NA CHY_0212 putative stage II sporulation protein ESubName: Full=Putative stage II sporulation protein E; chromosome CDS176242 2400 + 0.437917
NA CHY_0116 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS99036 432 + 0.439815
NA CHY_0401 rrf2 family proteinSubName: Full=Rrf2 family protein; chromosome CDS343401 429 + 0.431235
NA CHY_0892 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS789719 678 + 0.371681
NA CHY_1136 CBS domain proteinSubName: Full=CBS domain protein; chromosome CDS1009321 1308 + 0.376911
NA CHY_1694 putative prophage LambdaCh01, transcriptional regulatorSubName: Full=Putative prophage LambdaCh01, transcriptional regulator; chromosome CDS1512348 435 - 0.36092
NA CHY_2534 stage III sporulation protein DSubName: Full=Stage III sporulation protein D; chromosome CDS2264279 255 - 0.423529
NA CHY_0257 transcriptional regulator, Sir2 familyRecName: Full=NAD-dependent protein deacetylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS219050 717 + 0.500697
NA CHY_0512 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS444428 567 + 0.358025
NA CHY_1745 transcriptional regulator, IclR familySubName: Full=Transcriptional regulator, IclR family; chromosome CDS1562638 786 + 0.417303
NA CHY_1180 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1052171 474 + 0.362869
NA CHY_0813 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS720296 459 + 0.418301
NA CHY_2408 putative dissimilatory sulfite reductase subunit DSubName: Full=Putative dissimilatory sulfite reductase subunit D; chromosome CDS2157614 186 - 0.33871
NA CHY_1494 fibronectin/fibrinogen-binding proteinSubName: Full=Fibronectin/fibrinogen-binding protein; chromosome CDS1334204 1752 + 0.355594
NA CHY_1868 putative RNA polymerase sigma-M factorSubName: Full=Putative RNA polymerase sigma-M factor; chromosome CDS1675310 465 + 0.316129
NA CHY_0189 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS157452 690 + 0.495652
NA CHY_0013 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS10537 894 + 0.478747
NA CHY_1697 putative prophage LambdaCh01, repressor proteinSubName: Full=Putative prophage LambdaCh01, repressor protein; chromosome CDS1513491 765 + 0.347712
NA CHY_0658 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS571061 756 + 0.445767
NA CHY_1862 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS1668992 384 + 0.40625
NA CHY_2126 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1908375 1251 - 0.360512
argR CHY_1981 arginine repressorRecName: Full=Arginine repressor; chromosome CDS1771106 453 - 0.428256
codY CHY_1789 GTP-sensing transcriptional pleiotropic repressor CodYRecName: Full=GTP-sensing transcriptional pleiotropic repressor CodY; chromosome CDS1600301 786 - 0.422392
csh1 CHY_2157 CRISPR-associated protein, Csh1 familySubName: Full=CRISPR-associated protein, Csh1 family; chromosome CDS1936465 1941 - 0.38949
cspC1 CHY_0155 cold shock protein CspCSubName: Full=Cold shock protein CspC; chromosome CDS130056 198 + 0.474747
cspC2 CHY_0157 cold shock protein CspCSubName: Full=Cold shock protein CspC; chromosome CDS130978 198 + 0.489899
ctsR CHY_2351 transcriptional regulator CtsRSubName: Full=Transcriptional regulator CtsR; chromosome CDS2107706 474 - 0.409283
flgM CHY_0969 negative regulator of flagellin synthesis FlgMSubName: Full=Negative regulator of flagellin synthesis FlgM; chromosome CDS859576 270 + 0.422222
fliA CHY_1013 RNA polymerase sigma factor for flagellar operonSubName: Full=RNA polymerase sigma factor for flagellar operon; chromosome CDS894543 765 + 0.464052
glcK CHY_0270 glucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS236621 957 + 0.483804
glpP CHY_1843 glycerol uptake operon antiterminator regulatory proteinSubName: Full=Glycerol uptake operon antiterminator regulatory protein; chromosome CDS1652730 573 - 0.403141
greA CHY_2366 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS2121282 474 - 0.388186
hrcA CHY_0412 heat-inducible transcription repressor HrcARecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS354698 1026 + 0.392788
hypB CHY_1541 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS1378302 663 - 0.375566
lexA CHY_1378 LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS1235214 615 + 0.386992
mfd CHY_0200 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS164941 3483 + 0.457939
nusA CHY_1769 transcription termination factor NusASubName: Full=Transcription termination factor NusA; chromosome CDS1581954 1041 - 0.436119
nusB CHY_1994 transcription antitermination factor NusBRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1782949 435 - 0.43908
nusG CHY_2324 transcription termination/antitermination factor NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS2088215 522 - 0.39272
recG CHY_1468 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS1309484 2034 - 0.384464
relA CHY_2223 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS2005983 2151 - 0.433752
rho CHY_0130 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS112782 1278 + 0.472613
rnc CHY_1444 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1293465 708 - 0.371469
rnr CHY_0289 ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS255680 2175 + 0.456092
rpoA CHY_2281 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS2059609 942 - 0.464968
rpoB CHY_2318 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS2081980 3399 - 0.456016
rpoC CHY_2317 DNA-directed RNA polymerase, beta' subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS2078498 3459 - 0.477595
rpoD CHY_0455 RNA polymerase sigma factor RpoDRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS399269 1113 + 0.44115
rpoN CHY_0279 RNA polymerase sigma-54 factorSubName: Full=RNA polymerase sigma-54 factor; chromosome CDS244471 1380 + 0.402174
rpoZ CHY_1487 DNA-directed RNA polymerase, omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1328796 210 - 0.380952
scpB CHY_1945 segregation and condensation protein BRecName: Full=Segregation and condensation protein B; chromosome CDS1738211 579 - 0.44905
sigE CHY_2056 RNA polymerase sigma-E factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1841172 714 - 0.37535
sigF CHY_1959 RNA polymerase sigma-F factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1751822 774 - 0.408269
sigG CHY_2055 RNA polymerase sigma-G factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1840292 774 - 0.406977
sigH CHY_2333 RNA polymerase sigma-H factorSubName: Full=RNA polymerase sigma-H factor; chromosome CDS2091217 654 - 0.396024
sigK CHY_0617 RNA polymerase sigma-K factorRecName: Full=RNA polymerase sigma factor; chromosome CDS531976 705 + 0.439716
sigZ CHY_1709 RNA polymerase sigma-Z factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1523276 561 + 0.349376
spoVT CHY_0202 stage V sporulation protein TSubName: Full=Stage V sporulation protein T; chromosome CDS169573 561 + 0.486631