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2024-05-06 20:20:00

Gene list

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COG category: Transcription
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901

Number of genes found: 129

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Carboxydothermus hydrogenoformans Z-2901, Z-2901
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CHY_1359 sigma-54 dependent transcriptional regulatorchromosome CDS1216772 1722 + 0.355401
NA CHY_1697 putative prophage LambdaCh01, repressor proteinchromosome CDS1513491 765 + 0.347712
NA CHY_0212 putative stage II sporulation protein Echromosome CDS176242 2400 + 0.437917
NA CHY_0910 transcriptional regulator, truncationchromosome CDS804004 399 + 0.365915
NA CHY_2398 transcriptional regulator, LysR familychromosome CDS2147567 942 - 0.40552
NA CHY_2098 conserved hypothetical proteinchromosome CDS1881792 420 - 0.42381
NA CHY_2534 stage III sporulation protein Dchromosome CDS2264279 255 - 0.423529
NA CHY_2575 transcriptional regulator, LysR familychromosome CDS2294325 909 + 0.454345
NA CHY_0924 transcriptional regulator, AraC familychromosome CDS815116 864 - 0.324074
NA CHY_1605 transcriptional regulator, TetR familychromosome CDS1443764 597 - 0.355109
NA CHY_2210 conserved domain proteinchromosome CDS1992035 657 - 0.412481
NA CHY_1696 prophage LambdaCh01, transcriptional regulator, PBSX familychromosome CDS1513101 231 - 0.380952
NA CHY_1367 C4-dicarboxylate response regulatorchromosome CDS1225091 663 - 0.396682
NA CHY_1745 transcriptional regulator, IclR familychromosome CDS1562638 786 + 0.417303
NA CHY_0059 transcriptional regulator, LysR familychromosome CDS48186 909 - 0.349835
NA CHY_2091 sigma-54 dependent transcriptional regulatorchromosome CDS1875592 1551 - 0.422953
NA CHY_0892 conserved hypothetical proteinchromosome CDS789719 678 + 0.371681
NA CHY_1519 RNA polymerase sigma factorchromosome CDS1358224 639 - 0.374022
NA CHY_1915 transcriptional regulator, AbrB familychromosome CDS1715350 210 - 0.433333
NA CHY_1527 transcriptional regulator, LysR familychromosome CDS1363314 906 - 0.379691
NA CHY_0788 sigma-54 dependent transcriptional regulatorchromosome CDS695585 1842 + 0.431596
NA CHY_2218 DNA-binding response regulatorchromosome CDS2002221 756 - 0.387566
NA CHY_1343 putative serine/threonine protein kinasechromosome CDS1201771 2295 + 0.35512
NA CHY_0549 hypothetical proteinchromosome CDS478421 216 + 0.398148
NA CHY_2047 DNA-binding response regulatorchromosome CDS1833209 696 - 0.41092
NA CHY_2126 hypothetical proteinchromosome CDS1908375 1251 - 0.360512
NA CHY_1254 sigma-54 dependent transcriptional regulatorchromosome CDS1116505 1893 + 0.354992
NA CHY_0114 transcriptional regulator, AsnC familychromosome CDS97267 483 + 0.428571
NA CHY_2097 peptidase, homologchromosome CDS1880852 939 - 0.367412
NA CHY_0512 transcriptional regulator, TetR familychromosome CDS444428 567 + 0.358025
NA CHY_2591 putative transcriptional regulatorchromosome CDS2308337 1341 - 0.43997
NA CHY_0010 stage 0 sporulation protein Jchromosome CDS7237 861 + 0.439024
NA CHY_1318 sigma-54-dependent transcriptional regulatorchromosome CDS1173289 1770 + 0.310169
NA CHY_0401 rrf2 family proteinchromosome CDS343401 429 + 0.431235
NA CHY_0606 DNA-binding response regulatorchromosome CDS525167 681 + 0.418502
NA CHY_1706 transcriptional regulator, MerR familychromosome CDS1520674 393 - 0.424936
NA CHY_0550 transcriptional regulator, AraC familychromosome CDS478753 774 + 0.410853
NA CHY_1694 putative prophage LambdaCh01, transcriptional regulatorchromosome CDS1512348 435 - 0.36092
NA CHY_1413 DNA-binding response regulatorchromosome CDS1265186 687 - 0.419214
NA CHY_0813 transcriptional regulator, MarR familychromosome CDS720296 459 + 0.418301
NA CHY_0225 hypothetical proteinchromosome CDS194083 624 + 0.471154
NA CHY_2052 conserved hypothetical protein TIGR00244chromosome CDS1838835 465 - 0.412903
NA CHY_2370 puatative transcriptional activator, Baf familychromosome CDS2124536 774 - 0.421189
NA CHY_0434 transcriptional regulator, GntR familychromosome CDS376765 696 + 0.400862
NA CHY_1768 conserved hypothetical proteinchromosome CDS1581676 279 - 0.415771
NA CHY_2200 rrf2 family proteinchromosome CDS1981246 447 - 0.449664
NA CHY_1870 acetyltransferase, GNAT familychromosome CDS1677006 477 - 0.350105
NA CHY_0209 conserved domain proteinchromosome CDS174745 234 + 0.42735
NA CHY_2446 rrf2 family proteinchromosome CDS2191706 432 - 0.481481
NA CHY_2529 hypothetical proteinchromosome CDS2261371 804 - 0.466418
NA CHY_0143 RNA polymerase sigma-70 factorchromosome CDS124319 528 + 0.448864
NA CHY_2344 transcriptional regulator, CarD familychromosome CDS2100091 483 - 0.391304
NA CHY_0092 DNA-binding response regulatorchromosome CDS79413 705 + 0.442553
NA CHY_1098 transcriptional regulator, ArsR familychromosome CDS971975 330 - 0.415152
NA CHY_0839 conserved domain proteinchromosome CDS747332 522 + 0.475096
NA CHY_1494 fibronectin/fibrinogen-binding proteinchromosome CDS1334204 1752 + 0.355594
NA CHY_0859 transcriptional regulator, ArsR familychromosome CDS762097 360 + 0.411111
NA CHY_0229 ATP-dependent RNA helicase, DEAD box familychromosome CDS196711 1293 + 0.481052
NA CHY_0446 transcriptional regulator, GntR familychromosome CDS392914 372 + 0.400538
NA CHY_0013 transcriptional regulator, LysR familychromosome CDS10537 894 + 0.478747
NA CHY_2030 transcriptional regulator, TetR familychromosome CDS1813870 582 + 0.40378
NA CHY_0116 transcriptional regulator, MarR familychromosome CDS99036 432 + 0.439815
NA CHY_2009 conserved hypothetical proteinchromosome CDS1793582 417 - 0.41247
NA CHY_0658 DNA-binding response regulatorchromosome CDS571061 756 + 0.445767
NA CHY_1400 conserved domain proteinchromosome CDS1254870 225 + 0.351111
NA CHY_0677 transcriptional regulator, MerR familychromosome CDS592764 825 + 0.460606
NA CHY_2124 conserved domain proteinchromosome CDS1905956 1374 - 0.299854
NA CHY_1862 DNA-binding proteinchromosome CDS1668992 384 + 0.40625
NA CHY_0257 transcriptional regulator, Sir2 familychromosome CDS219050 717 + 0.500697
NA CHY_0141 putative GTP-sensing transcriptional pleiotropic repressor CodYchromosome CDS123303 744 + 0.443548
NA CHY_1180 hypothetical proteinchromosome CDS1052171 474 + 0.362869
NA CHY_1136 CBS domain proteinchromosome CDS1009321 1308 + 0.376911
NA CHY_2125 hypothetical proteinchromosome CDS1907402 981 - 0.383282
NA CHY_1273 transcriptional regulator, IclR familychromosome CDS1133418 786 + 0.388041
NA CHY_1865 putative transcriptional regulatorchromosome CDS1672073 795 - 0.415094
NA CHY_0715 helix-turn-helix protein, CopG familychromosome CDS633211 255 + 0.368627
NA CHY_1868 putative RNA polymerase sigma-M factorchromosome CDS1675310 465 + 0.316129
NA CHY_2408 putative dissimilatory sulfite reductase subunit Dchromosome CDS2157614 186 - 0.33871
NA CHY_1317 hypothetical proteinchromosome CDS1172649 657 + 0.327245
NA CHY_1114 transcriptional regulator, MarR familychromosome CDS988932 444 - 0.466216
NA CHY_2426 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS2172912 432 - 0.414352
NA CHY_1376 sigma-54 dependent transcriptional regulatorchromosome CDS1233553 1443 - 0.372141
NA CHY_1125 response regulatorchromosome CDS998499 618 + 0.412621
NA CHY_0189 transcriptional regulator, GntR familychromosome CDS157452 690 + 0.495652
NA CHY_1092 transcriptional regulator, ArsR familychromosome CDS967264 378 + 0.396825
NA CHY_0507 acetyltransferase, GNAT familychromosome CDS439658 531 + 0.382298
NA CHY_2567 DNA-binding response regulatorchromosome CDS2287096 711 - 0.376934
NA CHY_0628 transcriptional regulator, LysR familychromosome CDS541344 906 - 0.39404
NA CHY_1547 sigma-54 dependent transcriptional regulatorchromosome CDS1383255 2199 - 0.386539
NA CHY_1845 putative RNA polymerase sigma-W factorchromosome CDS1654656 531 + 0.34275
NA CHY_2622 transcriptional regulator, AbrB familychromosome CDS2330815 255 + 0.411765
NA CHY_1908 DNA-binding proteinchromosome CDS1709489 324 + 0.342593
argR CHY_1981 arginine repressorchromosome CDS1771106 453 - 0.428256
codY CHY_1789 GTP-sensing transcriptional pleiotropic repressor CodYchromosome CDS1600301 786 - 0.422392
csh1 CHY_2157 CRISPR-associated protein, Csh1 familychromosome CDS1936465 1941 - 0.38949
cspC1 CHY_0155 cold shock protein CspCchromosome CDS130056 198 + 0.474747
cspC2 CHY_0157 cold shock protein CspCchromosome CDS130978 198 + 0.489899
ctsR CHY_2351 transcriptional regulator CtsRchromosome CDS2107706 474 - 0.409283
flgM CHY_0969 negative regulator of flagellin synthesis FlgMchromosome CDS859576 270 + 0.422222
fliA CHY_1013 RNA polymerase sigma factor for flagellar operonchromosome CDS894543 765 + 0.464052
glcK CHY_0270 glucokinasechromosome CDS236621 957 + 0.483804
glpP CHY_1843 glycerol uptake operon antiterminator regulatory proteinchromosome CDS1652730 573 - 0.403141
greA CHY_2366 transcription elongation factor GreAchromosome CDS2121282 474 - 0.388186
hrcA CHY_0412 heat-inducible transcription repressor HrcAchromosome CDS354698 1026 + 0.392788
hypB CHY_1541 hydrogenase accessory protein HypBchromosome CDS1378302 663 - 0.375566
lexA CHY_1378 LexA repressorchromosome CDS1235214 615 + 0.386992
mfd CHY_0200 transcription-repair coupling factorchromosome CDS164941 3483 + 0.457939
nusA CHY_1769 transcription termination factor NusAchromosome CDS1581954 1041 - 0.436119
nusB CHY_1994 transcription antitermination factor NusBchromosome CDS1782949 435 - 0.43908
nusG CHY_2324 transcription termination/antitermination factor NusGchromosome CDS2088215 522 - 0.39272
recG CHY_1468 ATP-dependent DNA helicase RecGchromosome CDS1309484 2034 - 0.384464
relA CHY_2223 GTP pyrophosphokinasechromosome CDS2005983 2151 - 0.433752
rho CHY_0130 transcription termination factor Rhochromosome CDS112782 1278 + 0.472613
rnc CHY_1444 ribonuclease IIIchromosome CDS1293465 708 - 0.371469
rnr CHY_0289 ribonuclease Rchromosome CDS255680 2175 + 0.456092
rpoA CHY_2281 DNA-directed RNA polymerase, alpha subunitchromosome CDS2059609 942 - 0.464968
rpoB CHY_2318 DNA-directed RNA polymerase, beta subunitchromosome CDS2081980 3399 - 0.456016
rpoC CHY_2317 DNA-directed RNA polymerase, beta' subunitchromosome CDS2078498 3459 - 0.477595
rpoD CHY_0455 RNA polymerase sigma factor RpoDchromosome CDS399269 1113 + 0.44115
rpoN CHY_0279 RNA polymerase sigma-54 factorchromosome CDS244471 1380 + 0.402174
rpoZ CHY_1487 DNA-directed RNA polymerase, omega subunitchromosome CDS1328796 210 - 0.380952
scpB CHY_1945 segregation and condensation protein Bchromosome CDS1738211 579 - 0.44905
sigE CHY_2056 RNA polymerase sigma-E factorchromosome CDS1841172 714 - 0.37535
sigF CHY_1959 RNA polymerase sigma-F factorchromosome CDS1751822 774 - 0.408269
sigG CHY_2055 RNA polymerase sigma-G factorchromosome CDS1840292 774 - 0.406977
sigH CHY_2333 RNA polymerase sigma-H factorchromosome CDS2091217 654 - 0.396024
sigK CHY_0617 RNA polymerase sigma-K factorchromosome CDS531976 705 + 0.439716
sigZ CHY_1709 RNA polymerase sigma-Z factorchromosome CDS1523276 561 + 0.349376
spoVT CHY_0202 stage V sporulation protein Tchromosome CDS169573 561 + 0.486631