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# Rhizobium etli CFN 42, CFN 42

>RHE_CH03358 probable transcriptional regulator protein, MarR family
MNATPTLGFLLHDVARLLRKRFEQRAKCLGLTRSQWQTLAYLSNNEGIHQ
SGLAEILEVEPITLVRILDKLAERGLIERRQHPSDRRIWLLYMRDEAHPL
LAEMRELGDITRAEALEGISAEQREQLFHILSVMKTNLVQACRTPVDENE
MNDG
>RHE_CH03932 probable RNA polymerase sigma factor protein (sigma-70), ECF family
MDAEERRRFAALAKAVADDRDQQAFSILFDYFAPRLKTWLMGRKMTSGEA
EELVQEIMIVLWHKAYLYDATRSSLSTWLFRIARNRRIDLQRRANTRIFD
ETDPALQPPADIGAEEIIVNEDRDAKIRVAVGQLPEEQRDMLRAAFFLGQ
SHAEIAETTGLPLGTVKSRIRLAFGKLRQVLEQELG
>RHE_CH01046 probable transcriptional regulator protein, ArsR family
MRPFFHPALEDIKPEAILYALSDPERVAIFAKLAGTACGGTCSALADLGD
RVIPKSSLSNHFKVLRESGLIRSERQGVEMRNQTRCAELDERFPGLVRAI
LTAYGQLPEQLKTG
>RHE_PF00429 probable transcriptional regulator protein
MTLSNRSTIVAPIEVATFPKYVEALDIAQRMNTRLAAALRTEADLKIIAK
RLKSFEAAVKTGNHLAMSEANKEFHMAIAHAGKNQYLASFYEKLLSQGQR
MLHLHFEYLERTHEGYLLTDEHTLMLDAIRDKNVDLADELAHAHTRQFQD
NFINFMRENYTTDVALGPLRAAE
>RHE_CH00537 probable two-component response regulator protein
MQEQTIIIADDHPLFRDALRQAVIGMEGCQSIVEAGDFVAARTAAGAHPD
ADLMLLDLAMPGVSGFSGLMALRAEFASLPIIIVSATDDATTIRRALELG
ASGFISKSSGIEDIRRSIQTVLAGDIATPESYRDGQEQDPDVADLIHRLH
TLTPQQSRVLTMLAEGLLNKQIAYELGVSEATIKAHVSAILLKLDVDSRT
QAVIQLGKINMAMVA
>RHE_PF00399 probable transcriptional regulator protein, GntR family
MAKTPKSNLYEDLKRQILTMELDPDADLDEASLSERYGLSRTPVRDIFRR
LAGEGYIDIRENRGARVIPMNHSTLRNFFLVAPMIYAAVGRLAVQNFKPA
QLVELKQTQERFRTASQNTDALAMVLENNRFHEIFGEMSGNVYMQPSLGR
LLIDHARIGHTFFRPKNEDMRRRLQLAVDHHDGFIAALDAHDEDAVVDLV
FEHWELSRENMEMFIAPQGLKADAFVGGPATHILEKSS
>RHE_CH00647 probable transcriptional regulator protein, LuxR family
MANFASVVAPALLPRDELVRRLHGVADTGRLQSGLRALTDYVGASHYLLA
RCDLIQESGLDFIVSSDWPFDLVRDIANDLVSTYARSTELEKCMQVFQPN
FALLPEGADVPEGASRQYCSLTFNVGRSRLALMFLFGEGFILSPERLRDV
GLLAGYIASFLRCGGAKVDRDFELTDRELECLFWIAEGKTSDEIAMILGI
SRNTINNYITSVMRKTATKTRSEAIAFAVRNNLV
>RHE_PF00467 probable transcriptional regulator protein, AraC family
MSDPLAEMVTLLQPAARYSKLVSGAGTWRVERQETGQPFYCVVLEGYARL
SAEDKQLTLREGDFILIPAAHAFTMSSLDDGLSPGIDPLTVTMLPVETRH
GDPEGAPNARLLVGHFAFGSPDATLLVSLLPRIIHIRGDSRLSAIVQLVT
DEARAERPGKNMILARLLEVLLVEALRSNAGEKAPLGILRGLGDPRLAVA
IRRLHENPSKEWTVQQLAGEAALSRSAFFNRFRRAVGIAPMEYLISWRMA
LAKNLLSQEDIGIQEIAERVGYGSASAFSTAFTRFAGLPPSRYAEQSKTI
SNAAA
>RHE_PF00380 probable transcriptional regulator protein, GntR family
MKENSLLSDLAAHLFSNLSGNGRTPSERELAEHFSVSRGQIREALAILEA
MRIVERRAKSGIYLTTTEASVEAMALFARAGVPLDPILIYETVELRKIHE
IKAAELACDRATEENYKRLRDILAASEAKLAAGEGLAREDRDFHLEIVRA
TKNSVFYRVCSVYYVMGEHRLPIYFADAARSRRSHEEHIRIYEALLARDG
NLAQALMSAHLQGAQSYWKGLIGGPAAAAR
>RHE_CH03346 putative acetyltransferase protein
MNSEFAVRSMRPGELELVLEWARQEGWNPGLDDSFAFLEADPSGFFVGSV
GEVPVGSISVVKYGDSFAFLGLYIVHPDFRGKGYGKAIWEAGIATAEGRT
IGLDGVAAQQGNYRKAGFEPAYSTIRYGGVPTSLPGSTLVAQPVLDSRLE
GLQRYDAAIFPQPRDAFLAAWCTGRKGRRTAVVRKSHKIRGYGTIRRCYE
GYKIGPLFASDADSAAALLAELIPEANGAQIFIDIPAENREAIALAESMR
LQPGFETMRMYRGPAPAIPLRHVFGVTTLELG
>RHE_CH00988 probable transcriptional regulator protein, LysR family
MSDLDLNLLVALDALLAEQSVSAAARRLGLSTSAMSRTLSRLRTALGDPI
LVPAGRGMVATPHALAIAEDVHLLKDAVKAVLSPPSTVDIREVRRHFTIR
ANEAFVLLYAADLSAAVTNAAPGIRLRFAPRSDKDVQALREAAIDLDIGV
LPRDSGELRCQSLFEDRFVGVARVGHPIFEADRITAERYAACGHVLFSTQ
ADYAGPVDRALGELGLHRDARLIVPSFPAVIAVAAASDLIGSVPKSYCKS
GAMREIRTFDLPVAVPGFNIVQAWHPRMDADPAHRWLRALIFETFHTR
>RHE_CH03136 hypothetical conserved protein
MLDILTKLIDDKAGANLVVLHDLAYETVREHTGLPARLVTLGLRDFAANR
GVIPDPLQLPLDEKLFAIKGPSDLTIATVHGRVAVPFDVAGYSRGWESIF
PAFLAANQDRYEINIGVTPNSARMEENMTNEGILSRMGRLIAGIANAAID
KAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIIEDM
NALDEKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAKEQVDEG
QKALQAVLATRREADARLADFKRSIAKHPEEALAGHSKPTPGAGAARAAA
AVSRLTGVPSAENVQSSELDELDRLHREQAIEARLARFKADNR
>RHE_CH03675 putative transcriptional regulator protein
MEDFVHKLRQYVKSGTPAERRIAKYFSEHLNDLPFETAASVADRLDLSPM
TVGRFLRALGYQGLDSVKVEIRETVTTSPAQLQSAMSELHADAAEGKPLA
VLVAEQIQALHHIYHLTAQPLWAEAVRLISTAREVSIATHARLASLANHF
CQRLTQARDGVRTLDATDNRFAELFARQAVDDALLVIIDCRRFAKARLLA
RTARRYGYKVVLISPQQADWMADQSNVMLSLPPARAPDLDNLPPLIALLD
CLSESVILEVGEEAALRRRRMLEFATVLGETANH
>RHE_CH02089 probable transcriptional regulator protein, GntR family
MVDELGKAIVAGTYPVGSILPGDTELAQRFKVSRTVLRETMKTLAAKGMV
VAKARVGTRVTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAVEPF
AAGLVAERASAEEIETLRELALEMAASGHTADSLALADLRFHLAIAEASH
NPFMRTLGSLIEAALVGMFRISTPPSENGFANIADTHMRIVDAIVSGDSA
AARRAMEVVIVDGRDHVHEAFAAHGSPVVLGPISPAI
>RHE_CH00270 probable acetyltransferase protein
MTATIRDARPEDEARWRELWAAYLAFYDVTVDADITDQTWRRVFDPASAI
AMRVAEIDGRIMGFALFLTHEGTWIRGKDCYLEDLFVDPAARGKGIGRAL
LDDLVALCKANGLSRLYWHTSEQNTTARALYDSYVESDGHIRYRISF
>RHE_CH02834 probable acetyltransferase protein
MSEHQENEPRDRARLPDGVLVRAARLSDAEEMTDLMNLPGYRAGTLRPPY
QTIEEVRKRIENSSPGALNLVVTLNGKIVGNGGLHRLAGRRQHVASLGMG
VHDDFTGRGFGRILLGAIVEAADDWLAVKRLELTVYTDNDAAIGLYEKFG
FEREGLLRAFGFRSGEYVDAYTMARLRP
>RHE_CH03861 probable transcriptional regulator protein, ArsR family
MPLPKPEPGMSGQELHKLAGNAREASNLLKALAHQTRLLILCILATEERT
VGEIENILGIQQAMVSQQLARLRLEGLVNTRRQGRLVYYRIGNTSVLAFL
ESLFDLFPAAENN
>RHE_CH00807 probable transcriptional regulator protein, LysR family
MTNLGDLEIFAKVVATGSMSLAGRALGFSPAVVSKRIKRLEDRLGTRLLQ
RTTRQISLTEAGQGFYDRVLGILAGLEEAEFYISGRSAQMHGTLKISAPT
SFGRMHIAPHLTAFMQAHPELAINLVLTDEFSDIIGGGFDLAIRIAELTD
SSLVARRLAPVRRLLCASADYLAAHGEPRDIDELKHHRCLPAHNGDTWRL
NGPDGPLSLRPDGMLITNSSEVIREAVISGLGIALRSTWDIGNELKSGRL
VQVLPAYEGSHNVTLSAVYPSRQFLPAKVRLFIDYLTELYGPVPYWER
>RHE_CH02052 probable transcriptional regulator protein, ROK family
MKTADPELMRAINRLNVLDTVRRHGPISRIEISERTELSTTTVSAITASL
LDDGLILPRHEGDIRNEAVRGRPRVALELNPDAARVVGGKIAANRMVFVV
TNFRGDVLSKLALPIRIDRQPIGVIADLVEDGVRRCVVDAGLSLEDVDSV
CLGFPGVIEHRTGYIRSSPIFRDTNVDFAAEMSTRLSTPTIVESDAHAIT
LGHHWFGRARDLEDMVLISLEQTLGLGVLHGNRLFRGAGGLSHNLGDLVL
GMGPNGVMRLSSQAGESAILGEHQADGRFAEAIRLGRGMTHAQALIKADD
DRLISAAIRAGEAVGLTIANIVTLFAPPRVILVGSSLALGEPFLNSLRDA
YALAIPPSLKGVSELVFDDSSDDFWAQGAAAVALYELYESPWSTTGPAL
>RHE_CH00094 probable transcriptional regulator protein, MerR family
MSDNGPVRYKVAEAARLAGVSASTLRLWESQGLVVPGRSDTGHRQYSADD
VARLKRISWYRVERGLNPAAIREALESEEPSADSAEPGQGSGLGRKLRSL
RHAAGKTLDQVASDIGITASTLSTLERTSQGVGFKTLHDLAEYYATTVSR
LSGEESEEVPAVIRAGEWRTWPETTPGVTVQLLAEGRRMMDCHRFVLAPG
AASQGAYRHEGEEFMHVLSGRLELVLDSDQFFDLGPGDSLYFESRRYHSW
RNRHDGETVLLWINTPPTF
>RHE_CH03010 probable two-component response regulator protein
MAVKTGISDDAAHLLVVDDDSRIRALLNRYLAENGFRVTVAADGAEAQRK
LAGLDFDLIIMDVMMPGESGIDVTRGLRAIKNVPIIMLTALAESGNRIEG
LEAGADDYLSKPFDPRELVLRINNILRRNANGEGLKIEQVMFGPYTFSLT
RKELKKASEVIRLTDREQEIMLLFARRAGDTIPRHELIGNDTEVGERTID
VQINRLRRKIEEDPANPVWLQTVRGIGYRLSID
>RHE_CH03922 probable transcriptional regulator protein, LysR family
MRVLLAVVDAGSLSAGSRKLNAPLPSVSRKVADLERYLGTNLIIRTSRNL
QLTDAGRDYVEAARKIIADLEEVERRASGEYQMPRGLLNITMPIEFGHRY
VLPIALDFVNRHPEVMLNILSLDRSVHLVNEQVDVAIRLGELIDSSLYAV
KAGEFRLLTCASPAYLERHGIPQHPTELVNHDGIMFHKRSFFWSFEMEGK
RLEVMPRSRIEVNTAANCVAAALNGVGIARLFDYQVPEEVSSGALVQILK
GYDGEPKPIHIVYSRQGLLALKVRAFIDWALPRLRAACGSYGDVPSPK
>RHE_CH00856 probable transcriptional regulator protein, IclR family
MTSSDGMAQTRETGTLGKLMVLLDLVTHADTPLRFTDILARAGQPRGTLH
RQLSHLVEEGLLELDGDGRYAPGLRLLDFAARSWARNEFRQVAEPHLSEL
QQATGETVHLGVLRGQSIIYLDKVEGRQPVRMYSQIGNASPCYCTGVGKA
ALSLLPPETLVDLLAGLSFTSFTASTHASAETLAAEIREIAEQGYAFDRE
EHEAGIRCVAAPVWSEDRTFIGGISVTGPAYRLSMELLRQWAVPVQLAAA
RIMEGMRVRLGPRR
>RHE_CH03672 probable transcriptional regulator protein, TetR family
MSRSNRERTEQTRQALIDAGRRLFVDKGYAETATPEIAAAAGMTRGALYH
HFEDKKALFRAVVEGEAHAVAEAIAACSAPDDTPRDALIAGAAAYFDAMM
AEGRTRLLLIEAPAVLGLRLTHAIDADNAETTLRAGLAAMLPGADAALEP
LTVLLSAGFDRAAIAIEAGAERRSYDQAITVLFDSLADHLRR
>RHE_PF00560 probable transcriptional regulator protein, MerR family
MDPMLTITDVSRRSGVASSALRFYEERGLIASERAGSGHRRYHRSALRRI
AFIVFAQRIGLTLEEIGAELAKLPVDRVPSRRDWSRLSSVWAKRIDQRIA
ELQRLRSGLGECIGCGCLSIDRCRLANPADVAGRKGPGARYWLG
>RHE_PF00056 putative RNA polymerase sigma factor protein, ECF family
MTTAHSEEALKALMLLSLDGDEAAYRRLLTALRVLLVGYYSRRMAAATRA
DMEDLVQETLLALHSRRSTYDRNRPFTAWFFSIARYKLIDHHRGRGGRRL
AETELDDEIESDFSEDRLTARMDVERLLDGLPLRQQELIRQVKLEGSSVA
DAANRTGQSESAVKVSIHRALKAIGERLRGTS
>RHE_CH01213 probable transcriptional regulator protein, LacI family
MSISTVDRVLNGRDPVRPQTAERVLNAARQIGFHGVTAIARRLEHDKPVI
KFGFLLKQSHRKLYQMWSDILVAATEAFPDAHGRAIVRFMDDLAPDKAAE
AIYALSREADVIGMITSDHPQVNHAVDGLAAENIPVVTMISDISTASRAA
YVGNDCIKKGRTAAWFIAGLNSDGGKVSVFVGSHRYLAQELNEMGFRSYF
RESAPGFQMLETVATLEEPEIAYEATRRLLQTEPNWVGLYVAGGGITGVM
RALREDGEPAAKRLVVVAHELTNETRAGLAEGLIRVVLSHPAKLLGETLV
RAMAQALDTNRSQTVSQHIVPFDFYTATNI
>RHE_CH00710 probable transcriptional regulator protein
MLDLEQDVGRALFSRSQTGYRLTQDGQALLDHLQEMEAAARKVEAWRQSG
EGGTTVRITTGTWLAWLLTENFAAIRMPGDGFAIALSIGEARASLAYRES
DIGIRAFEPEEANLAARLLGEVAYAVYARRNAAETDERWIAVGEEEAISA
YLRWPHAHAAANIVATVNRPRSLPDLVRAGAGKTVLPCFVGDLHPELQRQ
GGELPELRHRQWIVMNAEDRHRPEIRTVADRMTKLIRSYADLFAGKRPSR
G
>RHE_PF00306 probable transcriptional regulator protein, GntR family
MAMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSV
SRTVVREAVAALRSDGLVEVRQGAGIFVISPDPALSGRKVDKARVASDLE
VLEIRTPVEIEAAGLAALRRSPAQEEAIFECHRKILHCIETDQSIREADL
ELHVAIAEATNNPLFKHFLESQGSAIIPQSRLVPETRTVEQTAYRKLIHR
EHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLRSFTS
>RHE_CH02930 hypothetical protein
MSSANKVFFAYKALAVAPDLSANDRRVAGAIIDHFNKKTGQCDPSVERLA
ALLEVDEKSVRRATTRLCERGLFKKASHGGKSHRASYLPCWMNFQQIVDD
WELRMRSRRRGDVDRDNRAEMSSSTGHECPVEPDKNALQTRRTNPSNEPF
LVTDGARGNVAKSWPQRADEQRAASQPERGDGHRSGSGWHIDQLKQFRPV
PRHQISHSQAADAAAERRWYADLHALGRELEADAIERLTQEIMTAVTAAE
RHQRGAGIRVIHEALWKRPGARLS
>RHE_CH03283 probable transcriptional regulator protein, AraC family
MAIMTDIVKIMPNTSPHQTKGPLVAVLAYDGLCTFEFGIAYEVFGLPRPE
MGEGWYRFSVCGIEPGPLRAAGGLTVAVDKGLEVLDAADLIVVPGWRSID
ATVPKPLANALRAAHQRGARIMSLCSGVAVLAGAGLLANRRATTHWRYVA
SIAARYPDVMLDADVLYIDEGSLLTAAGSAAGIDLCLHVVRGDFGSEVAN
SVARRLVVPPHREGGQAQFISAPVPEEREGIRLGPLIEWMRQSLAEEQPI
SLLAKKAGMSMRTFQRRFEATTGLSVGEWLLKERLRHARDLLERELAVSL
DDIAISSGFGTLATMRHHFRKRLGTSPHAYRKSFGG
>RHE_CH02047 probable transcriptional regulator protein, LysR family
MLHSRKLLYINEIARSGSIRKAAARLNVASSAINRQILALEEEMGAPLFE
RLPRGLRLTAAGELCIEHIREVLKNYERLEGRIRSLKMQQAGKVRLVTTV
GLAAGPLPEIIARFQSEHPRVFMQLRNDAGTMTVNPVLSGEVDIGLGFNI
PATPGIRTLGNFDIPIGVVLPPGHHLIGPGPINLADIVQERLVLAQQGTS
LRDVINLALARLDVHVEPVLETNASEMLKKLVKSGAGLTILNPLDVITEC
RQGELVFRPIAEPHARHQPMKLFARARAPLDSATSLFVEYLLAELAGLVQ
ELQAKGHIAADTSVAI
>RHE_CH02565 probable acetyltransferase protein
MPELRIDPFPSPTELNTLWSAAWNTPTAPDFSPILPRSLAHIGAYQDNRL
VGFVNVAWDGGIHAFLLDTCVHPDMRRRGIATRLVREATRIARERGAEWL
HVDFEPHLTSFYRTCGFRPTEAGLIKLA
>RHE_CH03066 hypothetical conserved protein
MPAPTPSTGTELLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLASDENA
RRLHEKLRHGADFGRRRLDDVLKEPVPLALVRSIKSTQPPKTPIAQRAMR
PQVKLAPSGPQALAAALILFVVGCGIGYFAGTTPDADEIATTTATAPANT
NDWLSDVTAYQRLLIRQPRHLVEVPASQAEEISSWLTTAIGVPFRVPDLS
AESWTFQGARVILGDNRPVGQLVYSNSDGDIISICFRKDAQPPETDDFKE
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMRIATAI
>RHE_CH03011 probable transcriptional regulator protein, MarR family
MEDTGGIDFEIIELFFFAYRDFVSDPDAILEKSGFGRAHHRVVHFVNRNP
GMTVADLLDTLKITKQSLARVLKQLIDSGYIRQVAGPEDRRQRKLYPTKS
GRELALALAEPQSRRIERAFEGASAQVREGVKAFLGGMRDRKKAD
>RHE_CH04035 probable transcriptional regulator protein, GntR family
MVLYRFYCVSMDRTSLVAELNRRGLRDEALAGPLYKRLAQALTSLIQEGL
LKPGTALPGERDLAEVLKLGRVTVRTAYRDLMAAGALESRHGSGTFVSSK
VERMEQSLWRLSSFSADMRSRGRLPAARILSREINAPSPEESFLLGLGGG
EPVLRLDRLRLADGLPLAIERAVVPVKFLGENAGGEGSLYDALASNGHRP
VRALQRLTAVTLDASYAAMLNVKAGAPALLIERVSRLEDQRVVEYTRSHY
RGDAYDFVAELRIGDDHE
>RHE_CH01551 hypothetical conserved protein
MITATQIRGARAMIGMSIEELAAASGLPVEIVTALEKGEFEGEPHALFDL
RSTLEAHGIIFLSSGNQDEGGPGIRLRARTSTDDGIRPENLNAANDD
>RHE_CH02900 probable transcriptional regulator protein
MTDDLATLLSLQRLQAAGTGPLYVKLRRTLEEAVRAGTLGHGDALPPERD
IAEFAAVSRVTVRKAIDELVADGLLVRRHGSGTFVAKPVSKVEQRLSQLT
SFTEDMARRGMSSRSEWLHKGIHTPSPDEMMILGLGTDVKVSRLSRLRIA
DDQPLAIENASVSGEFLPDPSVVTNSLYAELERLQVRPVRAVQRISATNM
KEADAQLLGVPVGAAGLSIERISYLGSGRAVEFTRSLYRGDAYDFVAELT
IG
>RHE_CH01076 probable transcriptional regulator protein
MDDRLDAIFSALSDPTRRAILARLANGKATVAELADPFELSQPAISKHLK
VLEQAGLIRSGREANSRPRILEPAALKTIADWVADYRRFWDQSFDRLDDY
LSKVQGNEK
>RHE_CH02039 probable transcriptional regulator protein, AraC family
MSFVESQGDRKYRTSERVGGLVDCSSLQVELRHFDPGWQVDLTLECTEIA
VLLSGQSKIRWTGDGHRQEAIARPGVAWVCPAGVHESAVEIMGTMPESLH
IFLPPSLVGESALSNFDIDPAKVQLAYAGGVPDPMVLQFGQLFRGLLNRS
LEPTDRLYLDGIQTALAAHLLSTYSSVRWQPAARAPTVDPKRLQRVFDFI
EARIAAEISLDDLAAEACLSPFHFARMFRKATGLTPHRYVTERRIEAAKE
KLRLARSSLAEIALDTGFGSQANFTRVFRKMTGLTPGQFRALIRG
>RHE_PF00287 probable transcriptional regulator protein, TetR family
MAAQKKLTRAEQKALRPIQILDAAFEEFVRNGFAGARVDDIADRVGVTKG
TVYVYFETKEKLFEAMISHFSVPFQELLQITAGLGGSATDRLMSILGLLY
DQIAEDRTTRELTRLVISEGQRFPDLIDRHHDQFIAPIIARIDALILEGV
ASGEFREIPVEFSDIVVAPILTTTVLRLIFDDRRVPTPSKDAFMRAYFDL
LFNGLLAERR
>RHE_CH02425 probable transcriptional regulator protein, ArsR family
MFHALSDRSRRGMIDRLGRGPASVTELAAPLAVALPTVMKHLQVLEESGL
VLSEKSGRVRTYRLQQDALAAVERWVEQRKTRWTAAFDRLNQFLADEPET
LPE
>RHE_PF00311 probable two-component response regulator protein
MRLLVVEDNKELAAWLGKALRQAQYTIDIAYDGEDAEHLLKVAEYSAMIL
DLSLPKLDGLTLLKRLRQSGNKLPVIILTANASLDGRVAGLDSGADDYLA
KPFEIAELEARIRAVVRRGQDRASSEITVGNLRFSGGTRQFFVEGEPLQL
TPREYAVLEQLVMKLGTTVSKAALSESVFGFDDEADPSAIEIYVHRLRKK
LEASSVQIATLRGLGYLLRHVQ
>RHE_CH02389 probable transcriptional regulator protein, MarR family
MNKNQSLPWDHPRFRSWIAVARACQLMQQSLARSLVDLDIKPPHLDILVN
LYRFEGISQQELARKLLVGRSNMSMLLPQMETRRLIERRGDERDKRVLRL
YLTDEGRKVTEAAMAIQTDLIERTLSEEPIEQCMATATSMERIIAVLLKE
LRDDD
>RHE_CH01274 hypothetical conserved protein
MHLVAVTKKSASTPELPSDRNSDQAAVLGWSLDRMTREMRDRQPGGSLGN
DSESAFSTAFKRVMGCSPRQYGGTQQAGDNMRNNIDAQ
>RHE_CH02765 probable transcriptional regulator protein, TetR family
MTATDLTSDQKTRSRGRPREFDMDAALDAALLVFSERGYHATSISELTEA
MGLASGSIYKAFKDKRGIFVAAFARYRKLGRRRLEAMIASAETGREKVFQ
MVMYYTELSHGEAGRKGCLVVGGANDFALLDDETAAHVVTAFAADEKLMA
DLIRIGQADHTIPKTVDPDAAALAFLCLTKGLRVIGKTGRSRQEMFAAAE
AAMKLVT
>RHE_PF00414 probable transcriptional regulator protein, AraC family
MTENSAQPFSFRFHGSSFDNMVETLGGAFGAFDAEPVGRAKDFHWGLDFS
VAETAVLLTGYHEAEFQFNVEPTVNTAEYLSLVVPRRGGMGVTYGARKAE
AGQGKLLLYNNFEPDSVLMHGQGNVIDELLINWPVILQTIGQTFEMPFSG
SLDLLPELDLSTPAGRTIGNLTETIISGMRDNGPLLQSPIAMAHMTQALA
DLVVRMVPHRLSHFLEKGTALIAPKHVRRAIEFMQANIDQPITMPKVAEA
AGVSSRALETGFRAFKGTSPAAYLLTLRLRAARRDLLDPECRETMKAICL
KWGFFHFGRFSAVYKATYGEYPSDTRKRMGRR
>RHE_CH01033 hypothetical conserved protein
MLKDQEQFEREERAKRLVMARKNAGFAGPKAIVDRFGWNANVYKAHESGR
NGFGIADAKKYAKAFRVNLNWLQFGTGDAHDPEERPVSVADVPKISWVSA
GQLTEQAPITDFSEFPTVAALDLPDGDWIALEVEGNSMNKISPPGSIIFV
NRRDKRLAPNALYVVADETGAATYKRYRPNDNPPFQPASYEDVPPPEFQG
AVTIVGRVRRSVIEM
>RHE_CH03289 probable transcriptional regulator protein, TetR family
MAIPRAAKTLRRTRIQEEKEEQILEAALDVFSARGFRGSTIDQIAEVAGM
SKPNLLYYFRTKEAMHRALIDRVLYTWLEPLRAFDAEGNPEEEIRSYIRR
KLEMARDFPRESRLFANEVLQGAPHIEDELKGPLKELVDEKAEVIRAWAK
SGKIIECDPYHLIFSIWSTTQHYADFDVQVRAVLGQEHAGDERFEDAARF
LEQLFIGGLRPDSPRP
>RHE_PF00272 probable transcriptional regulator protein, AsnC family
MLDPFDIKLLAALQRNSELTQGELSRKVNLSATQCARRLERLRNEQYIQS
VVAILNPVKLGFTVVAHTLVSLRAHTEGGNERLHRFIETAPEILECYSQT
GDADFLMKVMTRDLDHLSQFLERMIRVTDNLASVKSSIVLKTIKKTTALP
LQIVT
>RHE_CH02653 hypothetical protein
MCSPRGRSLEACAAALLLASWRHARCGAKSGRGRNDAGRGAWLRAFVGAL
RLAVDRWAEEQGRKSLADYVSETFAYLRAELANA
>RHE_CH02297 probable transcriptional regulator protein, GntR family
MDSADDSSLGPLTEDAPSAGFLDDGKNTIGSQLAWRLREAIISGELEAGS
KINLDKARKIFNVSLSPLREGLARLISDGLVEFQDNRGYRVAPISLANLE
EVTSLREELEVFALRESMRLGDVDWEGNVMRALHRLNRTERDAAHPETLE
HWEALHREFHLTLISGCGKPLLLHFCSLLLNLNDRYRRVFLIRTSGDRNV
GQEHSEIAQGAVARDADYACDKLRQHIHRTGTNLRNHLATKGIV
>RHE_PF00043 probable transcriptional regulator protein, GntR family
MTQPIEQIVRRKLSDEVFDRLERMITSGELQPGDEMPSERVLMERFGVGR
PAIREAMQSLANKGLVSISHGERAKVLRLTAKSIFRQVDLTAKIMLSQSA
DSLEHLKSARIFFERGMAREAAQRASATDISDLRDIIERQRASLGRAEEF
IDADMEFHTRIAQISGNPIYVAVSEAMLAWLKEYHTEMLIWTGKEKFTLA
EHDEIVDRLEANDVDGSEMALLKHLERSRALYTK
>RHE_PF00163 probable transcriptional regulator protein
MQDSHTSETTQKSIEAAIVSGILSAKIRPGTRLGENQLAVLFGVSRTRVR
EAMMRLETRGIVHVSPRRGWFVVEPSAEDAIAVYEARRVVEAGLLRSMGV
LTEEGRKALDIHLNEERNAMAAGDRQRLTYLMGDFHIRIAELSGNTIIVD
ILRDLTARTILISMLYQSEFHAAQSHEGHCRIFEAMQSGDFVRAAELSVE
HLDEVEMGLDLTARPDPLSDLRNSLSLPLKAASAISRQSDPRTTTSKEQ
>RHE_CH00949 probable acetyltransferase protein
MAEIEIRPFADGDADDVLSVILPIQREEFGIDITADAQPDLRVIPDFYQS
GKGQFWVAVKDGVIVGTVGLKDIGNNQAALRKMFVAAEVRGREYGVAARL
LERLFDHARDAGLTDIFLGTTDKFVAAHRFYEKNGFVEVAKGALPRAFPL
MAVDSKFYRYKVG
>RHE_CH03653 probable transcriptional regulator protein, TetR family
MTLKPDHAAVFSPPAAGGRFAAGEDPAKRQQILAGAKRVFMKMGFDAASM
NDVTREAGVSKGTLYVYFTNKEELFSAMIETERAAFMAAVRTALAEHDNP
ESGLYEFGMSFVTHMTDEKVISAMRTVLGVRDRMPALCQRFFKGPVNLRT
IMRDFLEQHVAEGRLEIDDIDLAAGQFLDLASGSFFKLRLFGSMEEPPTR
EEIDRVIRGAIKVFMAAYGVRRHETA
>RHE_CH00857 probable transcriptional regulator protein, LuxR family
MKTVMVPLSQTSTEEDDYINEIAGLKTQFDIFRFLKRVTEAYRSRAFMVL
NLPPTTSLDLQGSTVITSWPAELLALYDQEALMVNSPVLRRLRTSTRPFF
YDMTRETWSRDDGKSVLVTGLFERFRMMRGAYFPTHEASGLRGAVSFAGD
REPFSAAEMRELCYIAIHVFDRLAEIRNLDTRMTDSLTDREIDCLNWTAA
GKTSAEIAEILALSEHTVNHYLNRATKKLDTVNRTQAVAKALRIGLIK
>RHE_CH00473 putative transcriptional regulator protein, TetR family
MSEQPGASRRRQQQNTGQPRRIPSQQRGRERFEKILAVAAELIESKGSDG
LKMSEIVEKAGISFGALYQYFPDKSAIIRTLAERLNEEGRRCVEVELEKV
ADAAALQGALANIVDEYYAFFRREPVMRDLWHATHTDKLLQQIDAEDMEF
HAQAFLAVLARLWPDRDHGELLAIARLTMQLLAAAVRYAVSLDAEEGARA
IALFKTMQLVDFSQLLR
>RHE_CH03490 probable transcriptional regulator protein, ArsR family
MSSKSTDDPVFKALAHHRRREILDLLKDAPRTTGALCEMFPGMDRCTVMQ
HLKVLEEADLIVARKEGRERWNHLNSLPIKHIYDRWISAYAGHALSILDR
LRSDLEGQPEQ
>RHE_CH02462 probable transcriptional regulator protein, LacI family
MVARQLGYQPNRAGVRLRTGKTNVIALVLSIDEEIMGFSSQMVFGISEVL
SGTPYHIVVTPHSHSKDPMLPVRYILETGSADGVIISRIEPDDPRVRLLS
ERGMPFATHGRTDAGLVHPFHDFDNEAFAHQAVERLVKRGRRRIALLQPP
SKLTYYAHIRIGFQTGLHDYGAEEVPLRINTDAPLADIRDVVEVMMRSAN
APDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIRPEII
TAQEDVRQAGREMAKAVIARIDGVEPELLQSISQPIWPEGDR
>RHE_CH00496 probable transcriptional regulator protein
MARQNTVFKEAYNRYAAALRTDTALPSEPEIAAQLGVSRSTARAILTRLS
DEGIIRWNKRQKIVLREPTDRDLFPSEETDSLHDIIERSFMRRILADDAA
PGMQINELELAREIGTGTTSVREFLIRFSRFGLIEKRPNSHWTLKGFTRE
FALELADVREMFELHSAAEFGRLPRDNQAWADLAAMREEHVAMLADINQR
FKDFSVLDERFHLLIHRASKNRFIADFYDAIAIIFHYHYQWNKTAARERN
ERAIHEHLDYIAALESGDQAAIGKACRVHLRSARQTLLQSLPQNATESA
>RHE_PF00015 putative transcriptional regulator protein, LysR family
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSS
LLMPPLAARVAKTAPFVTLQMIDHASSEVFEMLRDGRADIVIDRSLEPPE
WVISRKLFQSWLVCIAKRGHPLLASHGICPGDAIPADVFCAVPHVLRSAD
GSRTGTIDPALARLGLARRVMVTVPHFQAVALAVEASEMLGSIPVHFARM
LTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRDQIAHALSAPE
PPWFPIATEPDHKRLEAGSARA
>RHE_PF00344 probable transcriptional regulator protein, LacI family
MAAVERLGYVPNRIAGTLASTTSRLVAFVIPSLSNIVFADVLRGAGAVLE
ENRYQAVFSVTDYDPSKEEALAAAMLAWRPAAVMLAGYEHTDGTAKMLRA
SGCRVVELLDLDGDAIDIAVGFSNRAAGRESAAFLLKRGYRRIGYVGHDL
SRDIRAGKRFASFCEILEANGTPLVAREILAGASSVENGRLALERLLARA
SDLDAVYFSNDDMALGGYFHCLAQGIVIPSQLALFGYNGLDIGRAIPQPL
STIRTPRVATGQMAAELVVANAPPQAIDLGFELIEGATA
>RHE_CH02697 probable transcriptional regulator protein, TetR family
MKSTASTSDKILDIAQSLIVAGGYNGFSYADIADAIGIRKASIHHHFPTK
AELVSVLVDRYTKQAAAGLQSLREQAASPADQLQFYIDYWRSCIENAAQP
FCVCAMLASEMQMLPDEVASRVRAHFRNLAAWLTSVLQAGVEQGLFRLDR
PEDQAQMLMASVHGAMLSARALGEPGLFIAVVGPEVAKLRAVTP
>RHE_CH00150 probable transcriptional regulator protein, MarR family
MDSGAYLASQLAKGFARSLHQRAVGLGFSPGQFPILLELWAEDGLTQKQL
LDRVAIEQATMANTLSRMVRDGLIERRPHPSDKRAQLIFLTPKARAMEAE
AIETAREADLALFKGFRGFERELTLEYIRRLLENAKAL
>RHE_CH03320 probable two-component response regulator protein
MAEPALPRDIVLLVDDSPEALGFLTDALEQSGFSVLIATSGPAALGIVER
ITPDLILLDAVMPVMDGFETCRRLKANVTVAQVPVIFMTGLTETEHVVHA
LESGGVDYLTKPINIDELRARIRVHLRNARSARSARVALDAAGRHLLAVK
GDGAIHWSTPQATRLVNAAMGSDDGMEIVVRHIAGWMRDRTTAGRDGIIS
ITHAGQAALQLAFLGSIGPDEYLFRLTAASQRSDDEMLRQRFALTQRESE
VLLWIAKGKANRDIGEILGLSARTVNKHLEQIYVKLGVENRASAAVKATH
VLHEI
>RHE_CH00066 probable transcriptional regulator protein, LuxR family
MFMTGSGMENADQARKSSPSGDTILVVAKADLFSECMVEALAKKFPNCDV
PSITNGNPMLEKDTSDIKLVLFYHIPAPELQDALQAVRENHPETSIGLVV
EAIDMMEPYVSRLVEARIIDGVLPLNLRLDVFMAAVDLLMKGGEHFPSAL
LNRLTNKGAQLEPSLYQTKSVDAARNNALKLRRDSISALTTREVQILDLI
CKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAASRFFNDHPVG
DDDMSSRWHN
>RHE_CH03008 putative transcriptional regulator protein
MVSYPCMFYRFQSKEGTNTIHTHLEVTKVAGDIFDFCSDMSDEQDARART
LIERAAAKWPLRILHVLSDAGAPLRFSRLMERVEGISQKVLTQTLRSLES
DGLIIRTLYPEVPPRVEYELTPLGRDLLMQVATLWRWIVERLGDFDARKA
VKLTAMGI
>RHE_CH02121 probable transcriptional regulator protein
MMIATAVVTIIMQRTSFSQFKCPAARALDSVGDWWSILILRDAFQGLSRF
DEFQKSLSVAPNILTRRLKHLTDQGLFERRLYQQRPARYEYLLTEKGRDF
FPVLMALFSWGSRHIPEEDLAFLLSDAASGRARETMLVDARTGEQVTPEN
TGLLAGPAADDEVRARIARMRAWYLGIDA
>RHE_CH02578 hypothetical conserved protein
MDIELRSGCPINLTMEVLGDRWSLIIIRDIMFGNRRHFRDLLTHSEEGIA
SNILAARLKRLLSLGFISKRDDPSHSQKAIYSLTEPAIQLVPLFAMIGAW
GRLHLPVSEDLSIRAELLEEGGQPLWDEFMEDLRQIHIVDPIGGANGTVT
SPVLARLTAAFLEVRGRMAAAGA
>RHE_CH01061 probable transcriptional regulator protein, LysR family
MDYNAVRMFVAVAQTGSLSSAAARLGVPLPTLSRKVAELEADLKVQLLER
TAKGCRPTEAGSRLFEQASGGIDLLEEAERAILSEQAQLVGRLRLSLPQS
FEPWWDLLALFQRAHPGIQINVYSTERRVDLLADGVDVALRVGAIADDTV
IARHMLTFRHMLVASPELVAAHDRPEGPQDILRLPCAAWGSTLDAQPTWT
LGGQTQKINATFTANDYLHLRARAIAGDVATELPSFLAAEYLKSRELVEL
LPEYPFPETALHLVYKRQRHPSTIVRAYLDFCSAHIAIVEARCRVTS
>RHE_CH04001 probable transcriptional regulator protein, LuxR family
MNINSLIQLLVILEECPNPDAVVAELEQVLHGSGFEYYGLLRHLQQNPAQ
QNIELRAAPLAGRWPEQWLQIYAAKKYVRIDPMVRYLAHAQRPFRWRESM
AAFDGDAHQRRMEQMMVDAFGHGLEDGYLFPIHGRNGILGSLTLGGKPID
LSPVEIALLEAVARKSFWRLLDLTGEAEALETVLPTETPLTRREMEILHY
LAEGMTSMEISKMLKISNHTVDWYMNGLQNKLKAKNRQQAVALAFRHGLI
S
>RHE_CH00142 putative transcriptional regulator protein, Cro/CI family
MPDPVDIIVGRNIRQLRAIRRVSQLDLGEALGLTFQQIQKYEKGTNRVSA
SKLHQIAVFLGVEISALFEGTDISEFGGRIELSPDAYALALSYDKLNSTA
GKEAVKTILTLMSGEAVESAA
>RHE_PF00200 probable transcriptional regulator protein, AsnC family
MKLDAIDLRILDAVQRDGRITKLALAEKAGLSPTPCWMRLRKLEKAGVIT
GYHARIAPRRIAPVASVMMEVTLANHRQADFERFERAVAATPEIVACWSV
GGGVDYILKIMAADIDAYQRLVDGLLDRELGIDRYFTYIVTKTVKEETVL
PVSSFAASGEDQSAS
>RHE_CH03538 putative transcriptional regulator protein, LysR family
MMLKSGILWINCPKNWNYTMRRTIFDLDVLRTFSTGMELGNFAKAAEKLG
RSTSAVSAQLKKLEEQAGTPIFRKAGRGLALTDAGETMLGYARRLLELND
EAAAAVHSVELEGWVRLGLQEDFGETLLPEVLGRFARAHPKVRIEARVVR
NAELLERVISAKLDLALAWSDGTLSAHCERIGEVPMCWIGPAEGRPGWHV
ASGEPMPLASLEAPCLLRSAATKALDAAGISWRLAFVSPSLGGLWAATAA
GLGLTIRTPIGLPTNVRALTPEAIGLPELPKLGLVLHRAEAELQPAAARL
GELVLQSVHGVLHGTAG
>RHE_CH02438 probable transcriptional regulator protein, AsnC family
MDRLDRKILRLLQEDSTLAVADLAKKVGLSTTPCWRRIQKMEEDGVIKRR
VAILDPEKVNTKVTVFVSIRTATHSIEWLRRFSEVVAEFPEVVEFYRMSG
DVDYLLRVVVPDIAAYDAFYKRMIAKIEIRDVSSAFAMEQIKYSTQLPLD
YMILENAKSNDD
>RHE_CH00610 probable transcriptional regulator protein
MSLKSMKPLARAPLLHVSVQESLRAYISDNGLKPGTLLPAESDLANQLGV
SRNSLREGIKALESVGVLESRRGIGIFVKAFSFEPLLDNLAYGLGGALRQ
IEEVIEIRRTLEVGLIGKTVEMIGDDDIAELRATVDRMRVHAERGQSFAD
EDQLFHTLLFRCQNNETLARLIDVFWLAFYKASDFINLDNADPVATWRDH
AAIVDAIEARDVAEAQKRLDRHYHGISRVIAANKKSANVGGAQ
>RHE_CH03080 probable transcriptional regulator protein, LuxR family
MSYMTTSERQSLLAAELAVAGTRGLFAQGLGRVSAAFGLSYATLMHAPSP
EDLLLKPLLIESSLPAAYVRDFDRANMMRGCPFGVRLRESAVPLAWHLDD
TVNGQAFPAELRALMLRHAIPAGVAMPTIAVDGRRLVFWFCGERAALGQS
EVNELAIVILHTLDAYNAVRRNEENAHSALSARELEVVRWTAQGKTSIEI
GQILTLSDHTVNAYMTNAIKKLDCVNRTQLVAKAIRLKLIS
>RHE_CH02946 probable transcriptional regulator protein, AraC family
MPKNQFRMLRSALTGVEAVEAETPRSFARHTHVQFGIGLVSSGAQKSLSG
RGVVEAEAGDIITVNPNEVHDGAPIGERRSWRILYFDPEIITGLSQEIGA
GRSEIPHPVIRDAAIATRFETLFRAATTGAADGLLREELLLQLVADVMRE
GDGSEERPPVPSSIRAARDLIDDDPLAAVSLADLSRESGLSRFQLLRGFA
KATGLTPHAYLVQARIHLARRLIAEGMPLAEAAFASGFADQSHMTRVFVR
KYGLSPRLYAGAFL
>RHE_CH01345 putative transcriptional regulator protein
MPKRLAQVAAFALGNPDEIAFGTTASIAAASDVQPSTLVRLAHHLGYEGF
SDLQSIFRERLRDRTLSYEERLVTLEQTSGDDEDANLLSGFIAAANQSVN
RLAATVQSETFTKAVDILAAAETIYLIAKRRSYPLTAHMSYAFSKLNIRH
QIVASPNGVDLETVQFASPRDAAIAASFSPYAADSLSQSQELADRGVPVI
AITDSAFSPLAACATHWFEVAEADFAGFRSLSASMALTMALPVAIAERRR
KRQHFKAGKAKME
>RHE_CH02356 hypothetical conserved protein
MDLNSTVKRPSDIGELKSMIVAAGLRLPEQQERVARIALVRPEMIAFGTI
SSVAIECHVSPSTVARVATSLGFDSFKEFKACFRQHLRNISASAGYP
>RHE_CH01275 probable transcriptional regulator protein, GntR family
MAIADLIELDLRSGRLVAGDRLPPQRELAKRLNVDFTTVARGYVEAQKRG
LVDSHVGRGTFVTGAAVRQRQDLSADAAPDPRRASVVDFSMNLPPEPDDP
DLIARMREGMSAVAASLVPLLRYQGFGGSGMDKEAAAAWLGRRGLTPSQE
RIFVTSGAHPALLAIFGLMAKPGDTVLSEIVTYPGIRSIAAQLRLNLAGL
PMDGDGIRPDALAAACERLKPKALYLNPTLQNPTTLTIPAGRREEIAAVA
RKYHLPIVEDDAYGFIPQEGPAPLAAAAPDLTWHVGGLAKCLGAGLRLAY
VVAPDTRAVWPFVSAMRANTVMASPLTMALATRWIEDGTADAVLRFVRAE
AAARQQMVAAVLPAGSYRADPISFNIWLPLTNGWTRSTFGSHMHASGIGV
VASDAFTVEGAASEAVRVCLGGPIGRGRLQGALEFMAHALEGPPEMAGSF
F
>RHE_PF00290 probable transcriptional regulator protein, ROK family
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLD
LTQQSLHRIVGRLHDRGMVAFSQSENRRPGPPSPELTLRREWCLTLGISI
NVGTIGLCLMGFGEPLDKMEIPQAGSSLSLEMERIEAAVEQILARRSAKR
RDILGVGLAVSGHRMLDTAFNCPLPLAHWSLIDLAPLLGERLGLPVWADN
VARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMPFRGSFGNAGE
ISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEW
IDRVTPAHNRAINAICAIFDPALIVLGGELPHSLARMLIERTEFNNLPRH
GALRDVPGLAVANIIDAPGAIGAALIPLFETVL
>RHE_CH02627 putative transcriptional regulator protein
MSEFVTSENRLGAYLKDRRGKLDPAALGFAGERRRTPGLRREEVASRANI
SPTWYTWLEQGRGGAPSADVLDRISRALMLTDIEREHLFLIGLGRLPEVR
YRKEEGVTPRLQGVLDALDPCPALIRTAIWDVVAWNRAATVLLTDYGALP
PKERNVLRFIFLDPRVRAAQYDWESVARFVVAAFRVDAARAGAAAEVEPL
LDELCRKSPEFLAMWRDNDVRTHGEGAKHIKHPVLGLLSFEYSAFLVDGR
PDLSMVVYNPATAEDAGKIRSLLG
>RHE_CH02365 putative RNA polymerase sigma factor protein, ECF family
MTVSGSSVARGVAERVARESYGRLVAYLGGRLGDIASAEDALATAFLTAL
EKWPVDGVPDNPDAWLLTIARRRKLDDWRRDKVKAKSADHLALIAEELST
AAEMEEEIADRRLALMFACAHPGIDVSARTPLILQTVLGLTAADIGARFL
VSPGAMGQRLVRAKARIRDEKIPFLVPEKEELSHRLPPVLASIYAAYTSG
WMDLDGAEALGQEAIWLASVVVSLLPQEPEPKGLLALMLYTEARRSSRRG
PDGAFVPLDSQDVGLWDRRQLRLAEGLLREANANGPTGRYQIEAAIQSAH
VARRLSGISNWQAVVSLYDVLGRIAPSPVVTLNRCVALMRIGQVDAALDD
IHALARDPRMADYLPYWTARAQICADLGRHVEAAEAFTIAIGLCWSEAER
RHLEGQRSKILC
>RHE_CH00121 probable acetyltransferase protein
MYSFRLARLSNLAAIVRLLADDDLGAAREIVSDPVDARYLSAFAAIEADA
NQLLAVATDASDQVVGCLQLSFLPGLSRMGMWRGQIESVRIAREFRGAGL
GAQFIEWAVAQCVERGCGLVQLTSDKMRKDSISFYEKLGFVASHEGLKRK
L
>RHE_CH01362 probable two-component response regulator protein
MNSALIPNLDRRQEHVPLPLRIENNAHTLALSAGQTHSLVILDNRELDRQ
CLAQCMAAQKADLQILAFGSIEEWKQKRDEYAPLAAILLNIGGKKVDEPA
VSEQIRKLSSEFASTPLIVLADSDDFGQIVRALEYGAKGFIPASVSVSVC
MELIALSVAGGIFVPASALFAMRHLLDSSNSTARPLSGIFTDRQAEVVEA
LRRGKANKIIAYELNLRESTVKVHVRNIMKKVKATNRTEVVFKLNDLFQS
NLSGGLAAN
>RHE_CH01079 probable transcriptional regulator protein, ArsR family
MIQTAPITTIMRALADPTRRAVFEQIVNSDEITVVELTRASTVTQGAVSQ
HLKALKLAGLVTERPEGRKVYYRAEPEGLAPLVDWMSHYGTFWRERFADL
RTLLKEIDP
>RHE_CH00168 probable transcriptional regulator protein, GntR family
MAGLKQVQRQTGVALWRQIADRIREAIGNGAYDETGMVPPETVLALQFGV
NRHTVRSALAALAQEGIVRAVQGRGTLIERKERLNFPITRRTRFTAGIGD
QARETRALLLDEAQEEASAEVGSWLGLKQGEMVIRLETLRHADRRPVSKA
TSWFPAERFAGIGEAYRKHQSITKAFAELGLADYVRATTEVTAAHAATAD
LADLELTPGAILLIAKAMNTDLDGVPVQYSISRFAADRVQFTIDN
>RHE_CH02002 putative plasmid stabilization protein
MNTMTIATDTAAVHPLITIQHEDESIALNRLVSSAGNVRRVNATAGLSEL
ADSIEAHGLIHKLTVRKGKKGRYEVIAGSRRLGALRLLAKEGRLAEDAPI
PCTLRNGEDVTELSLAENVQREAMHVVDEIVAFRDLAEGGMAPESIAARF
GQSVITVRQRLKLANLSPKVLDVLREDGMSLEQARALALSDSHEEQERVW
FETVSYNRDPRSLRAMLTREHVRSSDRLARLVGLEAYEAAGGGIVRDLFN
EDSGIFLTDQPLLVRLAMEVLERAAEPLKIEGWGWVETSLDASVAYGGVY
GRIYPQTRDLTDDEQAELAALGESFDEMQAQLEGYEEADPAIEADKMRLA
EIEGRIRAIQSGTKTYDPREQALAGCKVYVDQFGAVQVGRGYVKAEGREA
LEQLRRGEAGNEEDGEVPAASAPEPEAGYSAALVEELTAIRTAAMRVELA
NRPAVALAALLYPLVGRIFHSGYTSYDAAVEVNGQRRELAPSIKEPGEAR
ALSAWQAMKEAWGDILPGAAADLWTWLLDQPTDKLLELLAFVTAANLNGV
KGKHDQSRTRLDNAEQVAVAVGLDMRSHWTADATFLNRLSKAGIAEVLDE
AGCAAQVVRVIEKAPKAEAVAEAEKQLAGKGWLPVHLRSEGHGALPEASV
>RHE_CH01118 probable RNA polymerase sigma factor protein, ECF family
MTEDPALGAAERKTLLADLAREADALRPQLHRYAARLVGSVIDGEDVIQD
AFARVFATAGSIPPGTPLRPWLFRIVHNRAMDALRQRSTRRSEPLEMAFD
LADISAAGPEDALIRRDTVRVALGHFAELPVPQRSAVILKDVLGESLADI
AALLDLSVDAVKAHLSRGRARLRAISDVRSEVAPSPSPEALNFAALFNAQ
DWDALRRLLAEDVRLRQARRPEISGAADVGRFFTYYAGYPLVRVEPAWLE
GREILLVSAEPSGGPAYFMLLEWRGQKISLIRDHRYATYVMDGADVMPAA
SR
>RHE_CH00966 putative transcriptional regulator protein
MSLSTLKNRRERGFFDGQFLIAMPGMEDRNFARTVIYICAHSDAGAMGFV
INRPQSLTFTDVLLHLDMIKQEEPIVLPQRARDFPIQTGGPVESGRGFVL
HSDDYASDSSIPVSDDICLTATLDIVRAISKGAGPKRATMLLGYSSWAAG
QLENEVANNGWLTCPANEELIFDRNLDDKYERALAGMGINAAMLSAEAGH
A
>RHE_CH00216 probable transcriptional regulator protein, MarR family
MPIELTASQALGLWHGVALDQVRHDDRDLTLRQMAILLHIYLVPPPHTVR
GLAATLNVTKPVITRALDTMGEMGLVDRVRDDADRRNVIIKRTVGGALYL
EKLGDLVRDQGRRLPI
>RHE_PF00422 putative RNA polymerase sigma factor protein, ECF family
MTAIADPVARRPQNISAIPDAELVSLAKQGDEPAIRAIVQRHNRRLFRTA
RAIIRSDWEAEDVVQAVYVKAFTNLATFRGEAELSTWLTRITLNEALGRV
RARKNTTGLEEIDMQTTSRGGEVLQFPSSLSATDPESELSRSQARHLLEQ
AVDDLPDEFRAIFVLREVEGMSTEEAASYLGIKPETAKTRLHRARKLMRQ
SIEKQLSGAFSALFPFDGARCASMGDRVIAALRQTS
>RHE_CH04025 probable transcriptional regulator protein, CarD family
MTTQQKKPSTARHGFKTGESIVYPAHGVGTITAIEEQEVAGMKLELFVID
FEKDKMRLKVPVAKAMSIGMRKLSETDFVDRALKVVQGKARVKRTMWSRR
AQEYDAKINSGDLISIAEVVRDLYRAENQPEQSYSERQLYEAALDRMARE
IAAVNKMSETEAVRLVETNLNKGPKRGKAIEEDDSQDEAA
>RHE_CH02217 probable transcriptional regulator protein, MerR family
MPVNKYYSITELTREFGVSTRTLRFYEDEGLIHPERRGRTRLFRPADRRL
IGEILRGRRIGFTIAEIREIIQVYKEPPGELGQLKLLMKRVDEKREDLRQ
KRKDIDDTLTELDNIEEACLGRLAEIGVTT
>RHE_CH02077 probable transcriptional regulator protein, GntR family
MQTSQSHRAYLALEHLIVTLALKPGALVTEKQLIDMAGHGRTPVREAIQK
LAWQGLILVKPRVGLQVAEIAAEDHGNVMQVRRELEPIAAALAAEHATDE
QRLRLGDCARAMEECAVTGDLAGFFAADKAFDEILEDACPNGFIMAALGP
VQTHSRRLWYSTASPERLDRAIALHVAVIHAIQEGRPDAARAAMAVLIDY
LVAK
>RHE_CH02395 probable transcriptional regulator protein
MTRLNELRLISRVAQMYHIEGRRQAEIAQHLRLSQATVSRMLKRAEAEDI
VRTSVIPPVGTYSELEGALREKYDLPEAIVVECTEDRDGAIMARIGEAAA
HLLEVTLAPGEIIGVSSWSQTIFKMVENIHPQKSAQAKYVVQTLGGMGDP
SVQTHATQLTTRLARLTGAEPKLLPVQGVTTSREAKLLMQADPFVRETMD
LFGSITLAIVGIGAVEPSELLARSGNIFSSRELSDLAEAGAVGDISLRFF
DKNGKPVKTPLDDRVIGLPLEDLERVDRVIALAGGAKKTNAIAGALRVGV
IDMLVTDKFTAQRLID
>RHE_CH02469 probable transcriptional regulator protein, AraC family
MALLAARAGRYREYAPTPALWRHFSRLWSHTLNDGPPARVAIVPDGYCDL
LWIHGRLEVAGPDRTAAFPVIRPGATVIGARFAPGAAASWLKTPLSALVG
LSVPLADIGRKGTSEFEARLQDRPDPEAAATLFGRLLEEAARDEEEPARD
AAMIFAAADSDRPASGLPDRLGMSERQLRRRCYHHFGYGAKTLERIRRFQ
KFLDLCRRVDTMPLARIALEAGFADQAHMTREVAELSTLTPAIILDQLGG
WKGSG
>RHE_CH03914 putative acetyltransferase protein
MKTLSIDVRRAEPHDARAISETHRLAWQHTYAGIIPHRALTQMIERRGEN
WWRKATRGPATLLVLDVAGTVAGYATLGLNRARALPQEGEIYELYLRPEY
QGIGLGHMLFGEARRLLKSLGCNGLVVWCLEENEAASRFYRHHGGTDFCE
GMENFDHKQLKKIGFIWN
>RHE_CH03689 putative transcriptional regulator protein, TetR family
MNEITENTLDVTRQENVTRILDAAERLFRHYGYSKTTVADIARDLGMSPA
NIYRFFASKVEIHQALCGRMLATAYQIAYDIRHQPVSASERLRRYVKTQH
QLTLDLMLDEMKVHEMIIVAIERDWHVIEKHIDRVHDLIAEIIAEGIAAG
EFAEQDPVVASRCFGAATINLCHPQMVAQCLAKTNRASVDELIDYVIRAL
KK
>RHE_CH02307 probable acetyltransferase protein
MDERILIRPYAPGDVDATIEIFLRSIREVSSKDYSSAEIEAWAKVEDRGL
WAERRMSRPAWIAEIAGNPAGFSDLTSDGCLDMMFVHPDFQGLGVATRLL
GRVDEEALRLGFRRIYTEASRTARRFFERKGFRVVTLQIVEKRGQGLENF
LMEKFYT
>RHE_CH02772 putative transcriptional regulator protein, LysR family
MLPMALRILEAVEELGDAAGCEGAMASGKVRLSVPAPLGLYLSERLGDLL
AGHPKLSVELLFREEGSDMIEERLDLEVRIGPVADSSLVCRRIGWTTAFL
VASPAYLERRAPPRVPKDIKDHECLCYNRAGEANTWSFSNGSEDISVRIS
PRLTACNAVAIHRAALAGAGLAVLSHIIAKPDIAVGRLIPVMKDFQPSRL
PVTVVYPSRRNMPLRVKTVLDFLIDAMGQDPSMCAGGVDRGWDR
>RHE_CH00397 putative acetyltransferase protein
MRSLQKWLRIERRRLSPRLGADLRLSYSDMMTWTIRPPLAEDQETLADIY
LSVRRQTFVWVDPGKFHREDFCVHTNGETIFVCEHADRSVAGFLSLWPED
DFIHMLYIRPEFQGLGAGTALLRALPEWPRHRYRLKCLVNNRRAKAFYLS
HGFAVTGNGASPEGDYEELSFSPV
>RHE_CH02190 probable acetyltransferase protein
MSVTIAQEPPRQDGVIRLLDLSDAYAASLYPAESNHMVDLSSLEKPSVSF
FVARNEGAIVGCCALVEAGNGTAEIKRMFVDPQARGLRIASRLMNALEAN
AREKRLTAIRLETGIYQPEAIALYRKYGYREIEAFGTYLPDPLSLFMEKR
LG
>RHE_PF00289 probable transcriptional regulator protein, AraC family
MVQRSVLHFPNILIYTVGVKQVEGTLCFCGATKSSVVLPVLLNPSRLARP
VAMMSGGRRKEPSGMDALRREKMAIAEHGGYGFEPTHGGTSFESMVQAFT
AGYGVFGAQPLKDDRKFAWAADLRRTEALTVLHSVYQSSWTIRTLDESPQ
HLAFFMPHTGSFRLSIGKRTVESGAGYFLMANNHEVGDRVVQGGPHRSDA
LFLDWKVMKRVLASLVEKPLSESFGLDPILDRATQPGQLIGNLLQTIVQG
MRGAGPLLSSPLAAAAMSETLAHLVIRFGRHRFSDHLEKKKVSLIAPWHV
RRAIDYMHANIAEPLTMTMVADDVGVSLRALQTGFKAFRGTSPAGYLRTI
RLQAAREQLRDPTNQQSVREICAIWGFAHAGRFSIIYRSTFGESPRDTRL
RAERLR
>RHE_CH03150 probable transcriptional regulator protein, LacI family
MNSKADEIPGQSRVTILDVAAAAGVSKSTVSRILDERLPRSDSETARRVR
KVAEELGYVRDVSAASLRRGNTMTVGVIVPRLTDTVMAMLYEALAKACSR
TGRFAIVATTDDKPKADRLAAESLLRRGVDGLILSTAREDDDFPDELARR
GVPYVLALRTDGHSLSSVGDDRLGGYLAARHLLDLGHRRIGVIAGPSYAS
SSRGRVEGFSQALKEAGLTVDPSCIIPSTFGIESGAVAVETLMNLSPRPT
AIFAVNDNTAIGALSGLTKLGLSVPQDISIVGYNDIPIVSHLPTPLTTLR
VPFEQIAANALDLLAGDGGSVDDRIRISAPTLIPRKSTAPLR
>RHE_CH01744 probable transcriptional regulator protein, AsnC family
MDEPLDKLDLRLLLELQKDGRLTNNELGERIALSPSQCSRRRTRLEAEGY
IRSYRAHLDREKLGLDMLVVISVTLATHNRDNARRFSQLINGLPEVLEAY
ALTGEMDYHLKVATRGLTDLSKFVNDVLLPHESVQHVKTSIVLDTLKTFE
GYPVMMPGSRHGDSAR
>RHE_PF00313 probable transcriptional regulator protein, AraC family
MTEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIG
PSATVGSSIGLSVTGVAALPERLPDRALVVIAGSADAPMENNRPWDGQER
AAQAGIVAWLKRAIRPGVRLVSICSGALLAAEAGMLDGRECTTHHGCMED
LARLAPTARIRDNRLYVEDGERLTSAGITAGIDLMLYIVAEATGHACALA
VARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVAADPTRDWSVA
SLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEA
VAMRSGFGSARQLRRAWNRLHDSPPSAARPRPALGS
>RHE_CH03114 putative transcriptional regulator protein, PadR family
MRGFKGGMFGEAFRMGRKFAAGDLQLVILALLAEQPRHGYELIKLLEERS
GGFYVPSPGVIYPALTYLEETGLAEVENEGTKKLYRITEAGRRRVEENRE
MILHTLAKLERIGEKMAYVKRVFETDRHGADEGDDGDFMQDGGDIRAARM
LLRSALRMRYPWSKPEAARIAGILERAATEILQGGRPDTRG
>RHE_CH00593 probable transcriptional regulator protein, LysR family
MKTLDPLDGIAAFLTVSTHLSFTKAAEELSMARATVGAQVRQLEDRLGIR
LFQRSTRKVALTEAGAAYRQALSGILPQIREAERAAISFQKEAVGRLRVS
APPDLGHLVIVPAVSEFLKLNPAVSVELDLSHRPVNLVEDGFDLAIRGRL
EVDINLITRQLATSSIVISASPAYIAEHGVPMTPHDLVHHACLHFAELRW
GRIWPFSRDGEEFRIPIVPRLELNHSLGLRDAAVLGLGIVLLPDFVVGED
LRQGRLVRLLPDWDISTIQLQAVYPANRHIAVKVRRFVSFLAGKLRP
>RHE_PF00087 probable transcriptional regulator protein, LacI family
MTASRALRGAADVSKETREKVLQQAERLNYLGNRLALSLSSQRTNLVAVV
VPSMSNIVFPEMLAGISAGLRGSGMQAVFGISDYDMAKEREIIRDMLSWR
PAAIIVTGLDQPAETVRMLQNAAIPVIQLMDLDGTPIDFNVGLSHGKAGE
EMAKALLAAGRRRFGYIGSAIDRDLRAGKRKAGFEKVLRESGLSFVDERF
NAAYSSVAHGKRLSLSMLAATRDLDCIYYSNDDMATGGAFACLELGISSP
AEILIAGFNGLDVASALPFRIATSISPRRQMGEVAAALLLAASSGEGNEI
SEKIIAFTPEITGVD
>RHE_CH02990 probable transcriptional regulator protein, LysR family
MQKHMTLEPSWDFYRSFLTVLQRGSLSAAARELGLTQPTIGRHVDALEQA
IGVELFIRSPNGLVPTDAAQALKPYAETLAATAAALLRTASGERERVAGT
VRLSASEVVAVEVLPRILGPLQEAYPELHIELSASDAIEDLVNREADIAV
RMAEPQQDALIVRCIGDIPIAFHAHRRYLERHGIPQTMADLVNHRLIGFD
RQTAYVRMVMKRYPAPEGIKFSYRTDSNLAQLSAIRAGVGIGLCQIGLAR
ENPDLVHVLPDAFEIPLGTWVVMHESLRTSPRCRVTFDALVKGLRDYVIP
PARKRKSRSIFDENHG
>RHE_CH02595 probable acetyltransferase protein
MDADGVTIKLIGADEVEAFRHIRLEALRAEPSSFASRYEDWEILSLQEWR
DRLNEPVFIAFQKGEPVGVMGLFRQRSSKMAHRATVVMVYIRAKLRGTGL
AVKLLEAISDHARDIGIRQLELFVSAENSAAIRFYQRQGFAEIGRIPGGV
LEDGREIDDVMMARRLVG
>RHE_CH00796 probable transcriptional regulator protein, LysR family
MFAKVAEERSFVRAAQTLGVSVPTVSRAVSRLEQRLGARLFNRTSRQLAL
TDFGLRLVDSAARIYAEAEMAEDAARELATRPKGLIRLAAPMDFGTRWLA
PILPDFFELFPEISIDLHMSDAVVDIVGDGFDAALRIAVLPDSSLVARRL
TPVDRFILAAPAYLDRYGVPEHPRELAAHHCLGYAYRARQDVWRLRNGEG
KEEVIVPSGSLRATNSQALVPMALRGLGVIELPEFLAHDHLVDGQLTPIL
PDWTLPTGALYFVTPSARSRPAKVEVLSDFMMARLSNPVWRRRS
>RHE_CH00455 probable transcriptional regulator protein, TetR family
MGRRREFDEEAVLKGAMHVFRKHGYQGASIRDLEEATGLKGGSIYHAFGD
KAGLFDAAFRHYNRAVLEGRLERFAPPGSDLKGVRELFLSLLHEPDNGSL
GCLITNTAVEFGGNINTHPRVEAALGLLRSTFRSRLGEPSTSDRDADEAK
ADRTAVRLLAFYQGLLVLIRGGEDKASLRQAIEDEFNQLETLL
>RHE_PF00325 hypothetical conserved protein
MQHLDHAIQIALEAHEGQVDKTGRPFFEHCQRVALLVSGDEGRTVAYLHD
VAEKGSGWTLDRLREEGFPPAIISAVDALTRRPEEPDDEFVRRATSNPLA
LSVKQADLEDNLRQAEQAGKKTEKYQRGLDLLHDIRNQR
>RHE_PF00155 probable transcriptional regulator protein, MarR family
MAKPRHSRFDCAPGCSVEAAISLIDGKWKCVILFHLLEGTIRFNEIRRRV
PAVTQRTLTNQLRELEMDGLIVRKVYAEVPPKVEYSLSELGLSMAPVLSA
LKEWGDLNISRFGKAPASALAA
>RHE_CH02035 probable transcriptional regulator protein, MarR family
MTSRKNVQNTHMSEKLRELHGSLIEIVSVMNRPQRDEQMVREAGISLDRA
LFPLLVTVERLGPIGVVELADRAGRDYTTVSRQVAKLESLDLIERRGSAA
DRRVREAVISAKGKAMTDRIDAAREKIGRAIFESWDEHDFNELVRLMRKF
AQDIGGDIDKDAEKPQELGG
>RHE_CH01121 probable transcriptional regulator protein
MSKSVEWGRKPRGDAPVKLSDVAKKVGVSAITISRALRNPEIVSEDLREE
ILRAVEEMGYIPNLAARALAGRHNGTVAVITPALHQYGFTNLMVGIEDRF
RDTDLTVQYSNTLHHAEGEAGLLKSFLTQKPAGVIIAGAESYRDLLPLID
NAACPIAHVTDLSQEPQKLVVGLDHYRAGAEPTRFLLSRGYRRIAFFGRG
ADVRSRRRIEGYEAVMRDAGRFDPALIIGGDAPSRTGLGRELFARLIERV
PDVDAVFAQSDELALGVLIECKARGIRVPEEVGICGFNDLEFSAFVEPSL
TTVYIPRQDIGYRVADMLLRAIRDEPPDEDRVDCGFSIIPRGSTR
>RHE_CH01173 probable transcriptional regulator protein, MarR family
MTNMKAQTTKTMEIPEEEKRLEKQLCFAVYATAHAFTRAYKPILDRVGLT
YPQYLVMLVLWERSALPVKTIGEQLDLDSGTLSPLLKRLEQSGLIKRIRD
LRDERQVIVSLTPKGEAMKGEVDTIMTAIGKAAGCTIEEMAEMRDMLHRL
RANLGRAGEG
>RHE_CH01145 probable transcriptional regulator protein, DeoR family
MPPRSFSCGKTMLTTQRKTLILDILRRDGQVIAKRVAEDFSLSEDTIRRD
LREMAAEGLLKRVHGGAMPVSPDLPDFTARRSVSSEVKARLGAAAAAMIK
PRQMIFLDGGTTTAEIARHLPRDMGLTVATHSPTIAAELEHHPAEVILTG
GRLYKHSMVAVGAAAMAAISQLRPDLFFLGVTAAHPVHGLSTGDFEEAAI
KRHIARCSAETHVLLTEEKFDLVSPCPVLGIAEVAGLIVPAEMPAERLKP
YRDLNGTITAA
>RHE_PF00390 probable transcriptional regulator protein, AraC family
MRPGQHRQADGAAKPAARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDR
SGRVLADWQVIGSTRHLITSSCGVQVAPTSDFVDPTRFDYIAVVGGLLSV
ENPVDQQTITFLKQADAKKVPLIGVCTGTFILAAAGLMKRHESCVSWLHY
KEFRERFPDLSVRSDRLFNLDRQRGSCAGGSSSADMAALLVRKYISRDAE
RNALEVLQIEKARAPADIQPRRPLYDDYDDARVKAAMITMEQFVDGSMPI
EKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLI
EIALDVGFENASQFTRTFKRTFGQTPSQHRAAAARAH
>RHE_CH03351 probable transcriptional regulator protein, LysR family
MEQTGTFRRLHFVQKRYCYSAQGIRSDIAITLFRFSNNSATQTADLKPMD
QLSAMRVFIRVVETGNFTRAADMLAMPKATVTNLIQGLEAHLRTKLLNRT
TRRVMVTTDGALYYERAAQLISELEELDGSLSNSQSLPSGRLRIEMSGAF
ADAIVVPALCDFYQRYPDIRLDLGVSDRTVDYLVENVDCALRAGTPTDQS
LIARRVSEMDLITCASPSYIQKFGMPERPEDLEATHYSVNYFRAQNNRTL
PFEFRRGNEMVETTPRCIASVNDSRTYLTAALTGLGVAQVPTFMAREPMR
RGELVRVLPDWRRDPVPLYVVYPPNRHLSNKVRVFVDWLVKLLVEAKLND
F
>RHE_CH03710 putative transcriptional regulator protein, LacI family
MTESSRPHRGENLDLAHKRDKPTLRTIATITGLAVTTVSRALSDAPQISL
KTRQRVHRIAREIGYLPDRAAQRLKTGRTNVVAILLDSHEEVVGFSTSIM
YGIAKALKETSYHLVVAPNFLSTTNVEAAEYIIRNHLADGLIFTRTEPLD
ARVRLLLETRFPFICHGRTEFSTPHPYVDYDNFTFAYEATRRLIAKGRTK
VAVILPPKRLTFCQHILHGFMTAVREAGIAYEIPETVDLDTPADVLRDFV
RARAAAPDAPNSFICPGEVSALAVISGMSDAGRTLAADYDIVAKETSRLL
TQLQPKVDTIHEDLTAAGEDLGRMLLQRINNPDAQDLHLLLPPQINFPIG
>RHE_CH01822 putative transcriptional regulator protein
MLRLKEHYAPRGVNLVQIEGAWAFRTAADLSFVIRRDENEVKKLSRAALE
VLSIIAYHQPVTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRP
VTLGTTRDFLDHFGLEELRDLPGLEELKGAGLLSGRIPANFNIPSPLMND
ELSEDEDPITQMDLEELGLLAPRSTSED
>RHE_CH00250 probable transcriptional regulator protein, LacI family
MEQELEQAIGIRIRTLRLEKGLTLDELAEASGVSRAMISRIERAEASPTA
SLLARVCAALGLSLSAFFAEEGQQASPLARRQEQQVWRDPETGYLRRAVS
APGTASVVDIVEVEFPPGARVSFPPHAASHGMTQHVWLFDGELEMTTSEM
VYRLRPGDCLFMPVGEGHSFHNPGNAPARYCVVLDRGGR
>RHE_CH03529 probable transcriptional regulator protein
MSNTDPFSAIADPNRRFLLEELRRAPRTVNELAEGLPISRPAVSQHLKAL
LESNLVSVTSEGTKRIYAVNNRGFDKLNLWLDQFWA
>RHE_PF00334 putative acetyltransferase protein
MSALTSESRLVDSFETRITGIDSVDLDKLHALSMSVAWPHRREDWQFLRE
FGQGIAAIDEIGRILGSAMWFPYDDRFATIGMVITSPRLQANGAGQWLMG
HALDQVAGRNLGLNATRAARRLYLSLNFVREAPVFQCQGEAIAPPDVELP
PSVAIRPVEAEDLEAIVELDRLAFGTDRTLLLTQLMAHSKGVVLVRAGRI
EAFSLCRRFGRGHVIGPVVASSDADAIAVVHPHALEHTGSFLRLDTREKV
GIFADFLSRCGLAVFDFVTTMSLGDPWLPSPGGQVGHRPKTYALVSQALG
>RHE_CH01133 putative transcriptional regulator protein
MITQKAKYALRALTVLADADADEPVMISDIAAQQKIPKKFLEQILLDLKH
HGIVVSRRGKQGGYLLLKPAHTITFGEILRIIDGPIAPLPCLSITAYRRC
DDCDGEQTCEIRHVFAKVADATRKVLFSTTIADAVGPRHGAEVTRLLA
>RHE_CH00461 putative transcriptional regulator protein, TetR family
MRITKEQKQENYDRIVATASELFRERGFDGVGVAELMERAGLTHGGFYNH
FRSKEELIAESTENGLNETLQRYAGHDVLDVMELYLARDHRDGRGQGCTA
AALSCDAARQPETTKAVFAAGIDKLVRALEGGIAQRHASGAGGRAQAIAI
LAQAVGAIVLSRACPDDSPLADELLDACRADCRDAIENPMRQR
>RHE_CH00561 probable transcriptional regulator protein, MarR family
MEGDAFSAFAITALRLAGHLTAAGDRLAKPAGQTSARWQVLAAARRGDLS
VAQIARALGLARQGVQRLADVLADEGLIAYADNPQHQRAKLVRLTAEGAA
RLGVIEVAQAGWANKLGAAFTSAELDAARTVMARVMEVMEVDEIPGN
>RHE_CH00081 probable transcriptional regulator protein, TetR family
MNDSGGNREKKQARRPSTERTAQRDPERTRAAILEAATREFAENGMGGAR
VDAIAERAGTNKRMLYHYFGDKEQLYLKVLEEAYVGIRTAERALHIGDRS
PEEGIGELALFTWRYFLQHPEFLSLLGTENLHRARWLRQSIRLKELHSHL
IGELSQVLEQGKKQGVFIETADPLHVYLTIASLGYFYLSNQYTLSTIFGR
DLIEPAHLNAWERHIVHVTLASIKR
>RHE_CH03120 probable RNA polymerase sigma factor protein (sigma-70)
MTDIAWIDLALASARPKALGALLRYFRDLDTAEEAFQEACLRAIRTWPEK
GPPRDPTAWLIFVGRNSGIDAVRKRSKLQALPDEDTISDTEDAESDIAER
LDDSHYRDDILRLLFICCHPDLPATQQIALALRIVSGLSVPQIARAFLVS
ESAMEQRITRAKARVAKAGVPFETPSSEERAERLSIVSTMIYLIFNEGYS
QADPRHEAAAFSDEAIRLARLMLRIFPAEPELMGLLALMLLQISRRPARF
SAEDEIVLLEDQDRSLWNQLFINEALALLDKALRHRQPGPYQLQAAIAAV
HSRAKRAEDTDWVEIDLLYRALERIQPSPVITLNRAVVISKLHGPEAALD
LVDPLGEKLDGYFYYHGLRGNLLKQLGRHGQAREAFDRAIALAHSAAEAA
HIRRQIDKMQQEAGQAAVK
>RHE_CH03171 probable transcriptional regulator protein
MLTKSSTELVRQRNSVLVLSVLRRHGALAHTEISDFTGLSSATISAITAD
LERAQIIEKSEQQAASGRGRPRVLLRQRRDCGYLIVVIISSDAVQYSLVD
YAGKLIDRFSEERSHDPSGAGRFVEGVRAGLSRILDRSRITQEKVLLISI
SSKGLVDSTEPVLVWSPIFGSDQIDFESALRPDWQAKIILDNETLLVAAA
LGAREEIVKGADFRSLAALSLGHSIGLGIVRRGGQTGQEVSAPNFGHMLH
MAGGGLCRCGTRGCIEAYAGFYAILRSAFEVPLDTIPAKFVPVAELDKIA
VKARQGHRTSTFAFRQAGLALGNGLSRMLSLTERMPIAITGPGTRYYDLL
RQGIEEGLGQSHIVRMEGMPEIRIVPEEPILVFEGHLNRALSVIDQDIVI
SGVQGGE
>RHE_CH01020 putative negative regulator protein PspA (suppresses sigma54-dependent transcription)
MFKLISILLRGRAHDAEQAFADRHAVPLLAQQIRDAAQAIQSARRSVAVA
IAQNEQEKAQHQTIVSRIADLETRACAALDKGNEGLAREAAEAIAFLEAE
RDASVAAQAQFTTSIGKLKGIVRSAEARLQELQRGERLARATEEAQKLDV
VVAGPGLATLDEAEETLARLRLRQSQNELTAAALKDMESATRPAGIIEKL
ANAGCGAPLASSADDVLVRLKSRITPAA
>RHE_PF00348 putative acetyltransferase protein
MQTRQIEIAAFRSDHLDAAVALSRQAGWPHRTEDWQMALALSEGMVAIED
DRVVGTVLVTRYKEDCATINMVIVDETMRGRGLGRRLMDAALQIAGDRPL
RLVATTAGLPLYQKLGFHETGTVLQHQGLAGDIPAPAGTEAATADDLPAI
MALDRLAFGADREGLLAYLTKAGEFAVIRRHGGVSGFACLRPFGRGEVIG
PVVAADIEEARKLIEHHIARRPARFLRVDTTAAAGLSPRLAEYGLAHVGG
GIAMKKPSVGHAAAPAATTFALASQALG
>RHE_CH02597 probable transcriptional regulator protein, AraC family
MREADAIYRSPLAAAGGLAVIGSGRQHARHAVKDRKLPSFAAVLVERGQG
FLETTVGGRQRVEGPALFWLFPNRLHSYGPDDAGWDERWALFEGPFTRDF
LRMRLIGERHPLVRLRQIEEVVRLFARLHADLVDDSHLGQASAALALHGI
VIATARQASAAAGREGEDATGDLVESLRGRALQPLDLASFAAEHGISPAT
LRRKFIAETGMAPKDFQLRARIDHAKQLLATSDEKIETVAAMVGIEDPFY
FSRVFREREGCSPREFRMRYKRG
>RHE_CH02531 probable transcriptional regulator protein, ArsR family
MDQRQALTAFGALSQETRLHIIRMLVVSGPDGMAAGLIAEKAEVSPSNVS
FHLKELERAGLITQQRESRSIIYTAHYETLGGLIRFLMEDCCGGNAEICA
PAAAVAACCAPAIKEELQ
>RHE_CH02691 probable transcriptional regulator protein, LysR family
MADLNDIAVFAKVAQYGSFSRAAHSLGMPVSTVSRKVTSLEEQLGVTLIQ
RTTRKLSLTAQGRAYYDRCSEPLSHLLDAEQALGETQRKPGGLLKISVPV
IFGQEVFYEFISAFLKTYPDIQVDLFVTNLFLDLVAENIDVGIRFGDLKD
SSMIAQRLGKSVRYLVAAPEYLKGRAIPAKPEDLTEHRCVLLNGRNGEAE
WHLVSGRKSLDLRVSGPVSSRDFDAVSAFTYRGHGIGLLPSTYCDEQIRR
GELIRLLPEWSSPEIFVHAVYPTRRFLPLRLQVFLEALKAWNTPLWLPLH
>RHE_CH03659 probable transcriptional regulator protein, LysR family
MAFTLRQIQYFVAVAEQGSVTRAAQNLSISQSSVTEALKELETDLGVELF
ERHPRGLTITHNGHQFLRHATKILASVSDARTSFSGQQSPLSGTLNIGVT
SLVAGYVLSDLLARYRRACPGIEVSAIEDNGGYLEHLLVGGELDVAVMVI
SNLRDRMALQAEILETSPYRLWLPMGHPLVSADIISVADIAREPLIMLTV
DEIEENTGKLLSALGARPHVAFRTRSVEAVRSLVATGAGVALLPDLVYRP
WSLEGDRIESRDVSGSLPVVQVGMVWRKGSSLPQAARDFVGIAESMRSGR
MR
>RHE_CH04007 probable transcriptional regulator protein, DeoR family
MLAAELALEFGVSEDTVRRDLREMAAAGLCERVYGGALPVSPAHGSLTQR
IGVAADRKQALARAAAKQIAAGLTVFFDAGSTNLAIANALPAELELTAAT
NAPAIAAALIDKPAVNVILIGGMVDRQTGGALGAKALRDMEQISPDLCIL
GACGVDLEAGITAFGFEDAEFKRFATSKSRRVLVAVTSEKFGTAAPHSIL
PMAHCECLVVEHDADPAVLAGYRQRGCRTVIAGQTN
>RHE_CH01630 putative acetyltransferase protein
MRTTMTADERKAHMRERIEAGPPPGILYYADGQPVAWVQVGPRQDVPQFN
SPRTVSRPLEEEDARDPSIWAVSCFFLLPKMRGRGLSHRLLAGAIDHARR
QGARLLEACPIDHVKQSKSVTLCIGSTAVFEAAGFETVAMRKDGRPLMRL
ELRG
>RHE_CH00747 hypothetical conserved protein
MITKHTIPSDEELTAFIDGELTAEEAARIETMVNEDKSVAERLEFLARAS
LPFEQAFAPLLRDAPRERLEAMLAAIPARESAKSAAVAAFATRRGLLGAL
AASLVGGIAIDRAVIGIGRNFSAKDENSEWRAVVAEYISLYTPETLAGHV
PAREEQAAQLSPLDEKLGLSLSPEAVALPGIDFKRALLLQYDGKPLAQIA
YLDPETGPMALCIVRSDAGPKAPDVESRKGMNVVYWSNATHAFMLIGHAP
ADRMTAIADEMRGRVAV
>RHE_CH03860 probable transcriptional regulator protein, LysR family
MIDKLEFFIALANEKHFGRAAEECGISQPTLSAAIRQLEDQLGVMLVQRG
SRFQGLTPEGQRVLEWARRIVGDARTMREEMRAARRGLSGHIRLAAIPTA
LAMLSRITTPFQERHPGVTFSIVSRNSLQVLSMLENLEIDAGITYLENEP
LGRVTSVPLYAERYHLITAAGSPLSDRDNVTWKEVGDLRLCLLTADMQNR
RIINRHLTEAGATVHPTLESNSMIVLFSHVRTGRWASIMPRNVAKSFGFP
IEIRMIPIVEPEAHHLVGLVAPYREPFTPLVSALLHEARVLVRDEEL
>RHE_CH02757 probable transcriptional regulator protein, AraC family
MTLPFSPYQEIVDIAMRFAPGDGEFSTAIGNLHVSRRSKPSDPLHSSYRP
CFAFVLQGAKSLQLGTEQISYGTGDYLLTSLDLPVAWRVTEASPDVPHLC
LGLAIDSEKLLELLSRIDIPRPAAHTDGQRGMVVNVAPPELMDAAVRLLR
LLDRPGDIPAMAPLIEQEILYRVLTGPHGARLINIATADSHSNRIARAVA
WLKENFARPLRIEDLAERVNMSVSSFHHHFKSVTAMTPVQYQKQLRLHEA
RRLMLVERLDAGTAGHRVGYQSPSQFSREYSRLYGASPARDVDGVREIIA
AG
>RHE_CH00611 probable transcriptional regulator protein, LacI family
MPKVGIRDVAKLAGVSTGTVSRVLNDHPSVTDELRARVRRIIDDLGYMPD
PSARSMRSKVSRLIGIVIPDLTNPFFSELVQSAEQAAASHGYNIIVMTSF
DDAAKEADRIGQLTSRKVDGIILVPSNDFHTLKLPKALPIVVVDRLMPGY
SGIASDHRSGVRLGVEHLLKLGHRRIGFISGPRHSVPANDRLKGYLEAMG
QSGDDGQIQASQLIAEAAFDYESGRSAGNYLLARARSERPTAIFASSDQQ
AIGCMRAAHDLGIPVPAALSIVGFDGIPLSSMTTPRLTTVRQPIQKIAAA
AVAVLLNKQPTPGVGHPILLDCELAEGETTSSPQPD
>RHE_CH02321 probable transcriptional regulator protein, AraC family
MERLAEIACLSSYHWHRIYRAIYGETLAATVKRLRLHRAAGEIVGTELVV
SEIAKRSGYPNLQSFNRIFKSVYGMPPARYRKEGSHTAFKPSPNGKTQIM
FDVTIREIAPTELIGVAHTGSYMQIGKAFETLFGTLYARGLARPDMRMIG
VYLDDPDIVPAEQLRSIACVTGSADVPAEAPFERRRIDGGTYAVLRHKGP
YADMHTAYQWLYGEWLPKSGRQLKDSVMFEEYLNNPRDVPPTELLTEIHM
PLA
>RHE_CH00328 probable transcriptional regulator protein, AsnC family
MPNDVQPLDEIDQAILEALAGNARISLKELAQQVGLSSPSAAERLRRLEE
RGVIKAFTIDLDPAAIGYPLQAIVRVRPLPGQLHIVERLIQEIPEIVECD
KVTGEDCFIARLVIRSMAELDGLLDRVAERAETNTAMIKASPVKRRLPPL
SRGK
>RHE_CH02762 probable transcriptional regulator protein, AsnC family
MLDDRDRRILDTLQRDAGISVTDLAERVALSVSACSRRIQRLEESGHIAR
RIVVLDRERMGVPTTVFALVKTAHHSDEWTENFRRIIGGIPEIVEAHRLT
GNHDYILKIVLPRVEHYDVIYKQIVRKLELFDVSASISMEELKHGMTIPV
GYVR
>RHE_PF00067 probable transcriptional regulator protein, GntR family
MFSPVESRRLYRQVADQIRSMIAGGELVVGQKLPAERELAEQLSVSRPTV
REALIVLEVEGLVNIRMGSGIYVVRRQGISMATSESEPVEGPFELLQARA
IIECAIAEEAATRAGPEDIAVLDEALRRMSGGLDDAATVLAADRAFHTGI
AAIIGNATLIRVTGEMFDMRMTPYFAKLASHFEGPPTWRSAVDEHRAIRD
AIAAGDTAGAKAAMRAHLTLSQKRFSESFGEEFSGEEERGRDKAAAKGAT
KT
>RHE_CH02806 probable transcriptional regulator protein, LysR family
MSRQDINRSGEMEVFVSVVERGGFSAAATARRMTPSAVSKLVARLEARLG
ARLVNRSTRKLQLTPEGCAFYERSIAILADIAEAERQASSGEQASGRIRI
NTSGSFGNHVLAPLVPAFMALHSAVTLDITHTDRIVDLMEERADVAIRTG
PLKNSSLIARKLGATGKLIVASPDYISRHGEPRSVADLSRHCRIGFSYAR
AVEGWPLREDGETVTVPITPGVQVGDGEAMRHLALSGAGLARLAAFTVRA
DIDAGHLVPVLEAANPGDIEEFYAVYMGQGGPLPGRVRALLDFLVKHVRL
>RHE_CH02780 hypothetical conserved membrane protein
MNETNPIVTEADLHAYADGQLAETARARVEAFLADNPDEAALVAEWQAQN
TGIKTLFAGYEKAKDTDPQLVTPPRAPSSAPKRWMAAGAALLVFALGAVS
GHYGPALLPKPDLQLAGSETLPKQAETAFTVYAAEVRHPVEVFADEEAHL
ATWLGKRLAVENLKIPDLQSLGFKLVGGRLLPVDGRPGAMFMYENQAGER
LTVIVGRNRENRTTSFRFASSGNLETFYWVDGELGYAVTGEVSRETLRGV
AEECYRQFPS
>RHE_CH02066 probable transcriptional regulator protein, LacI family
MAAEQKKGRRTRLDDIAARCGVSISTVSRALAGEKGVRPEIRKLVLETAS
AASYALPASVAGKKVMLVASGAAMIDYVRNQFTLHVLEGLNARAAALGIE
VAMRPVTDKEDEARVMAEMRDNPGFGGMLILTVDEEDMLAAAAGLGKPVV
LVNSDDPYMRLSSVTPCNRSAAFIAAERLIEAGHERILFMLRPGRRTIER
RLEGWRDALQHHGLQADADLVLEVDDWLPELGAEAITRLVRDKGLSFTAV
LTAGDSLANGAVRGLQAMGYAVPKDISVMGIDDLPQSAFLNPPLSTVHIP
MRELGATALDLLRDMMLGLATPRRRVELSCHLVERGSVAAVSHPQEVAPH
S
>RHE_PF00288 probable transcriptional regulator protein, LacI family
MERKVNLKDVARDAEVSLSTASHALNGTAPLTIEVRERVLDSAKRLGYLD
RRRKKATIAALHVLLLAIPHDAAPESDLNLVSWTILNGLRRECERRGIRI
VPYVSSGRRIDGAEVRQIAISERADGIVVLNDDQPELIRSLASADMPVVI
VNGEDPAMLVDTVTPENRFGARLGIEHLLALGHRRILHLTWKGRTTIQRR
YDGFSDAYFAAQLPVPKDMIIEAEGYEPRHGEAAINALLHRDPTLKGATA
VFCAADNLALGCLKALADRDIRVPDAISVLGFDDIVPGEFSRPPLSTVSV
PTDRLGAAALALIEQRLIANDPQRPAHRLELGCHLVLRGSIAPPR
>RHE_PF00373 probable transcriptional regulator protein, TetR family
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSG
ITPSVSEVAEAAEVSRATAYRYFPSQAALVHAVVDEALGPILGWSSDSPD
ARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFTR
GHRVDLLKCVTAPLQGTVPPESRERLAQALSLVFGVEVLIVLKDIWGLTS
ESAQSVAEWAAKALVDSALRQAESKG
>RHE_CH01554 probable acetyltransferase protein
MDTSCFIRPAIEADIEAFFEICLKTANGGHDASALYSDPRLPGYIWSVPY
LKFAKDFAFVLVQNDRPVGYVVGAPDTSRFDQDLAASWWPSVRREIAGLA
PTRPRDADVLDRIQNPRSGTVWLQHQYPAHLHINILPGLQASGWGRKMIS
TELQALRNHGVTAVHLGVDPANERAKGFYRHLGFSEFERDGAVAFAMRID
QGSR
>RHE_CH04029 probable transcriptional regulator protein, MarR family
MRLMTGRRLIGRLAIQSAAPGLELSHLDVLDAVRRAEPAGEVTVGTIAEM
LRIDPSRASRVVAEMVGRNVLRREASQADARRIVVVITDAGQALLAEIHA
QKLAIISEIVSDWPGEDIERFATLFERFIGGYEAIFLSRDRDTPG
>RHE_CH03654 probable transcriptional regulator protein, AraC family
MNAIARAIWFIESHFESDISLEEISEAAGLSRYHLSRVFGLVTGHSISSY
VRGRRLSRAVPALVSGSSTILEVALCAGYGSHEAFTRAFRDQFGMTPDAV
RRQAHARNLVLLEPIRMDTDHLNDLEPPRFETLQPMLFAGLQETYPYGDN
AAIPSLWQKFNTHFGHIPGQKGNVAYGICRHIGEEEKFRYMAAAEISDAS
DLPADFTTLKIAGQRYAVFTHRGHISGISLTMHRIFGTWWPTSGLEHGET
PDMLERYDERFDPYTGMGITEIWLPIRA
>RHE_CH03353 probable transcriptional regulator protein, LysR family
MDRFDAMRVFCRVLERRSFTLAAEDTGLPRSTVTDAVKQLEARLGVRLLQ
RTTRHVSPTLDGEAYYQRCLSILADIENAEAAFAGARPKGLLRVDVHGTL
ARHFVLPSLPSFLEAYPEIEFYMSEGDRLVDLVHEGIDCVLRVGTPVDSD
MIIRRVAMLDEITLASPAYVAARGLPQHPDRLAGHRMVGFRSSSTGGPLP
LEFMVDGTLRNITIPATVTVNAAESYVAAARMGLGLIQIPRYHAEKDLSD
GTLIQVLPDFPLTQTPVSLLYPRNRQLSPRVRVFVDWLVKVFARQNSKNT
LC
>RHE_CH01850 probable transcriptional regulator protein, TetR family
MSPRYSPVGDSGEGSVMLNEAENLDSLPAVDAEPERRVRDRGATERALLA
AAKGLLAEEGFQNFGINAVARRAGCDKQLIYRYYGGLDGLVEAIGADLGT
WVRDRIPEDTGGMFMLTYGDLMERLALLLLDALKNDPLMRRILAWEISEN
TEQVRRLSEARSKALALWLDRMRGSLAPPKGLDAAAVNAVVIAAIQHLVL
SGAAGGRCAGLSLKTSKDWEKAATALKRLVRGVYG
>RHE_CH01336 probable transcriptional regulator protein, LysR family
MKEASWDDLQLFFHVATGGGLSAAAARTGLSAPTIGRRMLALERVTGRSL
FNRGPRGYLLAKDGQELLDRVRLMQDAARAISDWRGEVLTLPIVSTAADG
WTLRFLADHLASVWRPKDSFRMCYKTCDASVDFTYREAHIAIRHSRPDSG
NVAIRRSVKVAHAAYQAVDFAQTNCNWISLGTDTAITPADKWTFEQPDYW
ITSWTNTPHMLFYLIRGGAGRGVLPCFIGDEERKLVRAGPVIDDLTYEMW
IVAHDDERQRPEVRTVIDRLAALFADHEDLFAGRRPSG
>RHE_CH00634 hypothetical conserved protein
MVYLDQYGQPEIMGQGARETILTPALCRAARGLLDWTQADLAERAAVSRS
TIRDYEGRRHDIHRATEAQLRLAFEKGGVRFVEIEGAGTGLCLPD
>RHE_CH00129 probable transcriptional regulator protein
MPVARSERLLTLLQTLRRYRRPVTGTVLAQETGVSLRTLYRDIASLQAQG
AMIEGEAGIGYVLKPGFMLPPMMFSEEELEALVLGSRWVARAAEPRLAGA
GADALAKIVAVLPADMREMVDSATLFVGRKRQDEDRADVSAIRKAIRLER
VLELHYGDEQGRISRRRVWPFALGYFEHVRIIMAWCELRQDFRHFRTDRI
IDMAVHETRYPRRRTVLLKEWRETQDVPLET
>RHE_PF00218 probable ribose operon transcriptional regulator (repressor) protein, LacI family
MRKPKTQKNAEIDKPARVTMMDIAAAAGCSQAAVSFVLNDTPGTRISQQT
RDRVLEAARALGYTGTSYTMKASYSGLDNVIGFAVDQLATSPEAIVAIEG
ARQASWNTGNVLLVTQTLGDPVMEPKAIRALTNGGISALIYMTIYTREVQ
LPSYVCGLNMPTVLLNCYTADHAFPAVVPSEIAGGQSSTRHLITHGHHRI
GTITGEIWMQAAQDRLTGYRRALATADIPFDPELVVEGDWSAGAGYAATM
QLLALQDPPTAIFCQNDRTAVGCYEALKDAGLRIPQDMSVVGYDDEEISR
HLVPALTTSVLPHLAMGQWAIEHLNLQTMPGKRYPITKLECSLVNRHSVA
APRAKARHIFDGAHGPR
>RHE_CH03850 putative transcriptional regulator protein
MDDLDTELLSALRHNARISVSSLAAMTGASRATVAARIDRLVASGTIVGF
TIRTGHETRSAGVRAIVMIEVLGKLADRVADQLRGLPQVRALHSTNGKWD
FVAELEDRDLASFDETLRRIRLINGINSTETNILLKTSKTGF
>RHE_PF00235 probable transcriptional regulator protein, GntR family
MTFAVDAVSNRGATRFSDIIYEKIVGMIADGNFPVNERLPSETKLAADFG
ASRPVVREALERLRADGLVVSRKGSGSYVRQRPDSSMLKMVPVGSLADVQ
RFFEFRAGLEAEAAELAARNWQPADKERITEALLAIEQCLRNGELGADED
QALHDAIAMATGNQFHITVREWFKPHFAIGHSVTRSLSLKRTPEQIRSVQ
DEHAVIVEAIFARREAEAHDAMKKHILNARARMFQGV
>RHE_CH01281 probable transcriptional regulator protein, TetR family
MKTVYERADIVPLLAETFRELGYEGATLSRITERTGIGKGSLYHFFPGGK
EEMAGAVLADIDAWFEQAIYRPLRTDDARQAIAAMWVNVDDYFRSGGRIC
LVGAFALDDTRERFSSAIGDYFIRWIDALRSALIRAGCAEAKAQTLAEEG
VCGIQGALVLSRALRDGKVFTRSLEALANRLEAAVR
>RHE_CH01043 probable two-component response regulator protein
MRPMRILLIEDDIKTSDYIAKGFTEAGHVCDVFGDGRDGLFQAQREAYDV
IVVDRMLPGLDGLAIIRSLRAAKVGTPALFLTSIGGVDDRVEGLEAGGDD
YLTKPFAFSELLARVNALGRRPPVQEQRTVLKVADLELDLIRREARRAGQ
AIELQPREFTLLEVLMRGEGRVITKTMLLERVWDFHFDPKTSVVETHISR
LRAKVDKPFQAQLLHTIRNTGYSLHAPRTG
>RHE_PF00474 probable transcriptional regulator protein, TetR family
MRRFAEDGYQNAAIGDVARDVGLSLPGLLHYFPTKVDLLLATLAKRDLDS
ANFIGHYRSDVSGLLKGMVEIFRHNAGMIEVIRAFAILNAESLMKDHPAK
AWFLARTTEMQNDIAATFERAIADGSIDKRIDSKTMAAELIAVMDGLQML
WLRDPDRFDMIGGLEAYVGRLLASLGLEG
>RHE_CH00249 probable transcriptional activator (regulator) protein, TenA family
MDGSMQNTEITGSFTAAAWERIKPLMAEIERLPLLERLSDGTLPPEVFRH
YILQDAIYLKHYARCLAVVAAKAPDNAQVLRFLGSAQKAITVEQGLHATF
LSQFGISSADVTAAEPSPSCFAYTNFLLATAYHSSYAVALSAILPCFWIY
MHVGEGIKGRPAIEGNVFQAWINTYGDPQFAAGAREVIALTDIAARAASE
TERADMMDVFVRASQYEWMFWDSAWRLETWPV
>RHE_CH03647 probable transcriptional regulator protein, LacI family
MSNSTPATIEDVARIAEVSIATVSRAIHTPEKVANSTRLKVNQAIAVTGY
TTNAMARSLRLGRSNMILVVAPDIGDPNFSNILVGLENEARAHGYGILIG
HTQNDAQRGLEYLKFFNSNQAAGLILFTGILPFGHQTMTARLPPSVGVFE
PVFNGGIPYVGVDDTEGARKAVDLLLAEGHRKIAFIGDSRTRLAYVRRRM
GYDAGLDAAGVPPDLRIVLEGDGTIESGRHAVEQLFMRDTLPTAFMCVND
QTAIGVMIGLGARGYDIPRDFSVTGFDDVPQAVFISPSLTTIRQPRTAIG
KQAMALLLELLSDGRPAETEILLRPDLVVRNSVSAPSRQWFKR
>RHE_CH01028 putative transcriptional regulator protein
MNTTAATQAGDLPASEDHNNCRALGQILDRVGDKWTIMVVGVLSRGPLRF
NQMMREIGGVSHRMLTLTLRSLERDGLVSRTAYATIPPKVEYALTDAGRS
LIEPLRVLSDWAIDYRPVIEKARADFDTRGV
>RHE_PF00426 hypothetical conserved protein
MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWS
QDPGSHCSFVAPASLTAGPTFWIGACVDGKASGEGMLRRRDGDKAGPAFF
GRMKDGIPEIGIIDLADGYRAGSFSDGDIGGQADPDPQDRIDAFRIAAKA
ARLARAKYAAEKNAGSARHYEELAQTLEQQTD
>RHE_CH02059 probable transcriptional regulator protein, GntR family
MTALGRGRQRLAQQVIDQLRAQIETGKLRVGDQLPTEPQLESTFGVSRTV
VREAIADLRAAGFVRPIQGKGVFVADPKVNTVMSLTPVEIKSIPETLELL
EFRMATEGEAAAIAAYRRTAEQEAAIREANRKMAGMIETGQQTVEADYAF
HMAVAAATNNRFYVDVLRHFGPRAIPRGQFPTLPEANDREYLQKVYAEHV
EILSAIADQDPERARQAMRAHLMASQRRYRMLAEQQ
>RHE_CH02981 putative transcriptional regulator protein, LacI family
MRPTAKDLAEAAGVSLATVDRVLNDRPNVSKKAVRSVHEAIERIGFIRNP
AAVSLARNKSYRFRFVLPKSGDLYLRELLRRVEELGQALKGDLTDIDYVQ
IATEDAHGVAKYLAGIGEEDLDGVALMAPESPQVRDAVARLLERNIRVVQ
FLSGQEKLPAADFVGVDNFAAGATAGKLIGTFACRTPGKVMVVAETMQSL
DSIQRRHGFDTIINERFPFLRSLPSIETHADERRANEIIGRVLENNKDII
AVYVLSSEARIPLSAVGANVELANLAVVVHERTPFSEEALRDERIDAVIA
QDPGHAVRSAVRIMRARSDAREPLAEQERIRIEILLKENL
>RHE_CH00891 probable transcriptional accessory protein (RNA binding S1 domain)
MAADLRFLAARIAAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGL
DDTQLRDLAERLVYLRELEARRATIVESIRSQGKMTDELMAKVAGAETKA
ELEDLYLPYKPKRRTRAEIARERGLGPLAEAILADRGQEPAALAEGFVTA
DVPDVKTALEGARDIIAEGIAENADLLGRLRAHMRQASLLKAKVVDGKQA
AGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIEADAETASPNK
PVERMIAAAYEIGASRPGDRWLMEVASWTWRVKLSMSLSLDLMRELRERA
EEEAIHVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAVVDGTGKVVA
TSTVYPFQPRNDVRGAQVELASLIRKHNVELISIGNGTGSRETEKLVADM
LAELPAPKPTKVIVSEAGASVYSASATGAAEFPDLDVSLRGAVSIARRLQ
DPLAELVKIEPKSIGVGQYQHDVDQQKLSRSLDAVVEDAVNAVGVDLNTA
SAPLLARVSGLGPSIAEAIVRHRDSEGRFETRRDLLKVARLGSRTFEQCA
GFLRIPNGKEPLDASSVHPEAYGVAKKIVAACGRDLRALMGDSAVLKSVD
PRQFIDEKFGLPTVKDIIAELEKPGRDPRPSFKTATFAEGVNEISDLTPG
MVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVV
KVRVVEVDAKRKRIGLSMRRDDGSSASQPRGDSRGRQGGRPQNDRRPASP
KPESQGAFGAALAEAMKRK
>RHE_CH03877 putative acetyltransferase protein, GNAT family
MAGLAHEARQEGHLHIGRLIDEWAAGDIRFARDGERLLGAFADEALVGVG
GVTIEPALPGALRMRRFYVRPAMRGRGVGRMLALALLDHARRFCRCITVH
AGNDGAAKFWESLEFRLLVQDGYTHVLVLRGRGEMAHHHAPICLRRTAWR
AKSRSTSAMSSAESLGPGLRRVADLMMPRLASTYLRQARPMPCCCS
>RHE_CH02413 probable two-component response regulator protein
MDHVDHILIVDDDREIRELVSGYLQKNGLRTSVAADGRQMRSFLEANAVD
LIVLDIMMPGDDGLVLCRELRAGRHKAIPILMLTARTDEMDRILGLEMGA
DDYLAKPFAVRELLARIKAVLRRARMLPPNLQISEAGQLLTFGDWRLDTV
ARHLLDKDGTAIALSGAEYRLLRVFIDHPQRVLNRDQLLSLTQGRDAELF
DRSIDLLVSRLRQRLGDDAREATYIKTVRSEGYVFSVPVEISEPRR
>RHE_CH01712 probable transcriptional regulator protein, LysR family
MRATELSELAAFAAVARHKSFRKAGEERGVTASAVSHAVLNLEDRIGIRL
LNRTTRSVSLTEAGELLISHLAPAFGEMAAALDALNRYRSTPFGRVRINV
PNSIGPFVIGRVIAPLLQRNPNLQLEINATDRLVDIVEEGFDAGIRFGER
VTEGMIALRIKPRIRLVVVGSPAYFEGRPKPQTPYELKRHLCIQNMFPSG
ARYAWEFEKDDQMVSFQPTGPLSLDDHELMLQAALGGVGLAYIWEPRVEK
AIADGELIQVLDDWCQPEEPLYLYYPSRRHMSAGFRAVIDAIRAE
>RHE_CH02541 probable transcriptional regulator protein, MarR family
MPTSKAAKQSASASPRSGGDGRKLSTFLCFAVYSANLAFGRAYKPILDAL
GLTYTQYIAMVALSEEDDQTVSTLGEKLFLESNTLTPILKKLESAGFITR
HRDPADERQVRVSLTPAGREILETDPSSALIDAVGLGDDFPVVQKSVTRL
RDNLLRAQAEPQKS
>RHE_PF00252 hypothetical protein
MSKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFA
ELGRDVSAPTEDQVGEPVRSSGERILENRMQELRWELEILRARLHGIRRQ
AATVVTENVRWADSSAHAQLGDQPWLKLAGAMAGAFVITRGLRRLPWGTV
VTTALPLAVAAMNRKPARR
>RHE_CH02106 probable acetyltransferase protein
MRLASPDDLQTVTMLTAAAYRPYTELLGSPPIPVTEDYTPRIERGEVWLR
DIDGQIAGLMVVERHSDHLMLFSIAVSPAFQRAGHGLAMLEWLEGKAREW
ARPEIRLYTNARMERNIALYRAFGFQETGRRPNPYRPGWTLVDMAKEIVA
A
>RHE_PF00145 probable transcriptional regulator protein, LysR family
MVNKDMDRLDRMQLFIRIVERRSFAAAASDLGLARSTATEAIKQLEDDLG
VRLLERTTRHVAPTLDGAAFYRRCVAILAEVDEAENVFRDMQPRGLLRVD
AHPLLTRTFLLPRLNEFLDRYPLLDLQIGQGDRLVDLVREGIDCVIRAGE
IADSGLIMRRLGMIAEITCASPAYIARHGVPRSPDAMEGHRAVGFISSRT
GQVMPLEFTVGSTVRSVTLPCRLTVNNSDTMSDLARLGFGLIQAPRYRLQ
RDLDEGTLVEVLADFLPPPTPLTALYPQNRQLSPRVRVFLDWIVELFSEA
DF
>RHE_CH04052 probable transcriptional regulator protein, LysR family
MIMLASRRFLPSISHLAAFEAVARTGSVTAAARELDLTQSAVSRQVSALE
DQLGVELFLRERQTMRLTLAGDSYAREIREALRRISSASLNLRANPHGGT
LNLAILPTFGTRWLAPRLGRFLGANPGVTINLATRLSPFDFRLDSIDAAI
HFGHPHWPGAELTLLMSERTVPACSPDFLKQHRISRPEDLLAVPLLHLTT
RPDAWEQWFAGNGVSFESVHGMLFDQFATAAQAAIAGLGVALLPTFLMQE
ELRRGDLVAAVDREMESRERYYLACPSERADYAPLAAFRDWIVAEAAANP
TA
>RHE_CH01864 putative acetyltransferase protein
MVIAAAQTRAEMRGQGVGTGMIEFAISEAKGRGVRLVQLTSNAIRKDAHR
LYERLGFKPSHLGFKMAVK
>RHE_CH00923 probable transcriptional regulator protein, LuxR family
MIYGSLFGECSWQDFLDRLAQTSPGGKAALHYHDLTSSVAHVPFMSGFSQ
SEIDQFVSHFGSVNPWIPRLDLVPVGQGLCGDEIVPREELIRSEFYNDWL
KRQTGCETSIGVSIIREENRTFILSTSTSSADPDLNSEAAKLYTQLAPHL
KRAFDFIRKRDLFAPHEQVAQTLFDSIGVGLIYVSEQRKARRWNKSAEAL
LAAGVPARIAADGTLALQCEKTASVLEFLTSRTGVQTKPHTAIVKGGNQD
NYRITLFRLHSDTFTEFLEGPTVAVIVEPMVATPLNERRDLLMQLYKLTA
TEIRIASSIASGQSPREVAMADDISYETVRTHLRNIYAKLGVNSRVRLVS
LLMR
>RHE_CH01763 probable transcriptional regulator protein, TetR family
MGRSQLEKQKTHEKIVETASKRLREEGLEGIGVADLMKEAGLTVGGFYKH
FASRDELVAEAIESAFDSWGRRLEAEGVDPAKMTAADIADRYVSAYHRDN
PGEGCPFAALTSDIARSGEKARRIATERLERNFEALASKATGANEGERRR
KAIMAFAMMAGGVGLARVSSDEALSDEILETIRDFVADIEK
>RHE_CH00139 probable acetyltransferase protein
MTIIRLDPSFTRWDELLALILTAFASMNGRIDPPSSALRLTAEALAAKAE
AEIGHVVIDDGKLTGCLFLRPEADCLYVGKLAVLPAAQGKGLGRRLLAVA
EETAAEFGLAALRLETRIELTDNHAVFAAWGFSRTAEKAHPGFTRTTFVE
MRKILTR
>RHE_CH01466 probable transcriptional regulator protein, TetR family
MPFKTAQMSTRGRIVEALSDLFYRRGTYLVGIDEIVRELRIARATLYRHF
DGKEGLIVTYLSHRHALVSDQLEKLVAGKGGAAAIFAIFDSLADKTRSEN
FRGCAFLIAVTENPGTAAIQDVARTHKVFLRALFGRLVPQGPAHDEISEQ
LLVVYEGVLAASVLRPEARPAEIARKAVAALLQAGGFDASGDEA
>RHE_CH00487 probable transcriptional regulator protein, LysR family
MKLTERASGELVTLIASAGTLEGLEPITVAIGELCQFAGQVDAGGIDEAW
AARIPVKIVAIERFLEVADQGSINRAARRLHLGQPQLSLQLANLEKFLGR
RLFERQAQGSVLTEEGRRAYQIFMAISQAWNDLKSAADERYRRTARSLRI
GSIIPTGSESWVARCLGQLVSEWNARRSNNAISLVSMTADDLREALKSGR
IDVAILDSVFGLEDFRHRELLQTDMVAIAPPDSTETTVADLVAGHAICMP
SPRTGLGHAAMAFSNERAPDRRLRSRDITAADSLPVIVDLVANHGYVSFL
GRVSAMPIADKVRIVNLDEALPMSYHVAFNHRKAAADACAVIIAAAARIT
SETVAKTDGVRESAA
>RHE_CH00435 probable cold shock protein
MKGFIMTTGTVKWFNSTKGFGFIQPDNGGADAFVHISAVERAGMRELVEG
QKIGFDLERDHKSGKMSACNLQKA
>RHE_CH03107 probable transcriptional regulator protein, MarR family
MHSVPEMTNAGSVEFDDFICFAVYAAGHALNRVYKPLLDTLGLTYPQYLA
MVALWEQDAQTVGGLGEKLFLESSTLTPLLKRLESAGYIRRERSTEDERV
VVIRLSAAGIRLKEKAVGIPGCIVEASGRDAADLTRLRAEIVALREALNK
SGTHG
>RHE_CH02922 hypothetical protein
MAKKPEDQQRRVYVLPRDLVERIAQYQQMGGFASEVEVVRSLLTEALTKI
DSTATLLERVRTKFKTLPNASMVAKEVLAGHPLVTKIEFMGDEVEFWLHG
RQDLIAIRNGQGGTSEVSVSHEPNGVGHFKLDYAGRLLLEEEKGWAVLGP
SILAQRETERQATT
>RHE_CH02165 probable transcriptional regulator protein, TetR family
MAAKGGSQGKRPQRPAGSLPSMEETGSEPALSIERIVATAVELLDAEGVG
GLKMRRLADRLGAGAMSLYWHVDNKEQVFDLALDSVLEYRGTPQSIEAED
WRGAIFHMLEDWRASMLRHPWSASLLPRRALGPNILGRLELLGRILSRAG
VDEADLNGAIWSLWNYVMGATLTRANFDLSDEDMLAGQQRLAHLSAEYPT
IERARLLLDNDWDGVFRKGLGFLLDGLVPSR
>RHE_CH03208 probable transcriptional regulator protein
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTN
RIGASRLQRISEILRVPVGFFFENGGSGPIEGETSELNKFLSSKEGLALN
KAFIAIEDPNVRQKLVALAKTLATAGLSEVDTDLQDPVMHN
>RHE_CH02669 putative acetyltransferase protein
MRFGAGLRHVCLEYLAVCEGDLVAAMTPKTSGISVEPITAAHIDSFHRAL
DLVAREKKYLSMLEATPLLQTRAFVTGMIAKGNPQFVAVIGEEVVGWCDI
SRHFFPSHAHRGKLGMGILPTYRGQALGRKLISRESSKRASS
>RHE_PF00568 probable transcriptional regulator protein
MNQTLGARHSPDLTGANVEDAGEHNRAVVLRCIHRQAPISRAEIARQTGL
TKPAIARIVDRLLDEGLIMEARRRHGLRGQPAIELEINPDAYYAIGINID
RDHLTILAVDAVGNVRARVHHEKRFILPAEFLQLTSDAISHFQRSRLIDD
ARLAGIGLAMPDWLGEISLLGKPDAYQEWTDFDVRAALEGLTPHPVFTEN
EANAAALAELNYGLGAESSSFFYVAVNACPGGGLVLDGNGHRGAMGLSGE
IGWLPIADGRDGEAQKVQLLGEIFSLFFLYDFLARHGIKVSVPQDLLTLD
ARGKRLVSQWLKEMSAHLAVAVKHIAMIVDPDAVLVGGRLPIRIVDELLR
YVHEHLDAEDTNLPSLHRASIGEDASAMGAAAMPMAAALMLASADVAQRT
RSPLKFMDRLNS
>RHE_CH03410 probable transcriptional regulator protein, TetR family
MVRRPRRKAEETRQDILSMAEMLFRERGFAAVSIADIAGALDMSPANVFK
HFRSKVALVDAIAGRHLDNAAERFVPLDQDIPAEEQLLRFVLRLLEGHLQ
DIQKSPYIFEMVVSTIEAKLEAGKRYRARIEEKLREIIRKGMTEGRYHCR
DPERAAHTVADVLACVLHPILIVRDDKETLVRRAGEIVGFVDAALQNNAC
>RHE_CH03491 hypothetical conserved protein
MTISGAGIRRMRLLRSMKQQHLAELLGLNQATVSRWERGQLAPSPDQAVK
LERIFASPQYAAADAALKRLVEDSVRPVHLICDSTHQLMSASRPRQAEWR
APLGAFLGRSLFSYASAEIAAAEQSLEECGWHEGRLLTLTFDTGANGNVR
LPIAPGRVTWERIRLSDGSAGRLVTTIR
>RHE_CH02648 putative transcriptional regulator protein
MDGWSSKRPVGLSSFRAKFILVVGGAVLFDLLVSGGLALWNVQRLSRDAT
LEVGQGLEAASQEYIRTYADSTAAQVNLLLRQVHNDVDTLAGVLQAQIDN
PVRNSDVGAAIARTSPDSVSLSYDEKGKWSQNAPGSASVVSVWGYLLGED
HQPKPEIRRDIETSAVLDLVAPSLLQHGASKLQMYYIGPRERPIFRTAPY
TDQAQTFDRLYPGHNEADFWNFFFPGLYESWQGWARDMKTRPVADDITQT
APYTDAITGKLIVSFFHPLWTADRKDVAGTAGADITLDQLAQTVENVKVA
QSGFGFLAMSDGNVVAINGTGEQTLGLRSASGASGTGVTGLERSLKGSAQ
PAIAKLALDREQGIQHLLLQRDGNEVPYIVIVKKLPATNLWSSGPVRQEA
MLLGVVVPEREIDASLYAAQAKISEATNRIVIYQILAILMSLLIVTIAVF
AASKRITSGISALAGAAKRIQAQDYSVRVAITSKDEVGAAGEAFNRMAEQ
ISYHTENLEQLVEERTAQIADQKEEISALNAQLQRENRRLGTEVAVAERI
QLMVLPLQQELEEFQDIEIAAYMRPAEEVGGDYYDVLKNGRRLKIGIGDV
TGHGLESGVLMLMVQSVARALQEAGNTDAVKFLADLNSALFKNIVRTKID
KHLTLAFLDYDGREMILSGQHEEVVIVRANGEIQRVDTMDLGIPIGLDAD
ISAFIKTREITFEKGDLILLHTDGVTEAANDSGEMFGIERLCSEALRLKG
QSAEKVVSGIVATLMHFIGSQKIYDDITLLAVRHR
>RHE_PF00476 probable transcriptional regulator protein
MDSLASLFAFVHAAEQQSYVAAARIAGVSPSAIGKAVARLERRLRVRLFN
RTTRSISLTEEGAVLYERYKRIIDDMQDAEATVLQSRERPRGRLRVSVPH
IVGHHLLMPMLPAFAERFPEIELDVDFEDRVIDLVAEGLDVVVRSGELAD
ARLIARHLGDQHFVVCGSPDYFERHGQPETPDDLSRHACIRFKYPSSGRV
APWALRAPYERLLLPRSLTFNNTDAGLRAAQGGLGLAHLPVYVAQPAMRA
GTLIPVLTSFMVPFGSLSLVWPSNRQLSPKVRAFVDFVVGNCAARADAFR
SAASLSR
>RHE_CH01019 probable transcriptional regulator protein, TetR family
MAGRREEKREDLKARLIEAARERIARDGLTNLRARDITQDAGCALGGLYT
VFSDLAELVIHVNSWTLKALEAKLTLPAARDKSPTDRLRNLAQGYLAFAV
EHRNLWKALFDHFPPDTSPTPQWHLDEHLFLMDVIAEPLAELQPDMPPED
RAIRARTLFSAVHGVVSISLEGRFVGLPLERLAREVDELVVTIAAGAERR
REAGA
>RHE_CH01509 hypothetical conserved protein
MRCPYCGSEDTQVKDSRPAEDNTSIRRRRICPDCGGRFTTFERVQLRELM
VIKKTGRKVPFDRDKLVRSFEVALRKRPVERDRIERAVSGIVRRLESSGE
TEISSEQIGLQVLEAMKSLDDVGFVRYASVYRDFSLAEDFEKVISEINAK
IARDPLDR
>RHE_CH00933 putative transcriptional regulator protein, LysR family
MSDPVETAELVAFTKTVDAKSLSRAAAELRVPRATVSRRLARLEERLGAR
LLRRTTRSLVLTDIGEVFYRQACIALKAVRLAEQSVRMTDDVVRGDLRVS
VPPMMSVSFHAMLCEFASLYPELRVHVHISNQLVDILHGGYDVALRASSQ
LQPGLIARTLFRDPMIAVAAPAYLAGRGTPRTQRDLRTHRCLLGFARGEL
PETHWPLASGGKLHVDGAFFSNDIALLCDAAISGLGIALLPRGLVSPHLE
SGALVQVLAGVLGAEMQIALVYPERAFLPPQVRAFIDAVAAWVPRELVAN
QHNSQREPSGAVRRAKEAAPRSSKKASRAFSG
>RHE_PF00435 probable transcriptional regulator protein, AraC family
MSVGSDAPLPYPAGQNSSFWETAYSGTDPDALSEILSTSASPIKAAAQAN
SSIAYRCNFVSAGDLTIADCAYDGAISLRREAPSSKVIIFLPVEGNAVFD
AGQEPIHSVPGRGAILGAGRATGARLLGSRRHLGLFVDQARINGQLTHMF
ERTITGDAGFLPHFDLTAGPGLLLRQLVANLYRGLGGGGLLQESPLAVSA
LCDAAIFLLLETFPHRYSNELALPAPAPAPRHVKWAIDFMHAHITEPISL
NEIAMAAKVSIRTLQQGFRQFRNTTPIAYLHEIRMVAARRDLVEPGAKPA
VADVALRWGFTHLGRFAAEYKKRFGELPSQTLKR
>RHE_PF00479 probable two-component response regulator protein
MKVLIVEDDPLHRSYLHEAVNAALPECDTVIEAENGTAGEKLARDHKSAH
IVMDLQMASRNGIEAARTIWKERPETRILFWSNYSDEAYVRGVSRIVPDG
AAYGYVLKSASDERLKLALRSIFIESQCVIDREVRGLQQKSLGQTNGFTD
SEYEILVDIALGLTDRAIAKRRSLSLRSVQNRLQQLYDKLDVYQTAGDDH
EDGRFNLRARAVTIAFLRKLLNYSALERAEAELQEWLDGK
>RHE_CH00648 probable transcriptional regulator protein, LuxR family
MGHPSSRAMNGADPLRMVRVNRISSRSDLFPRLIAMQKLADAQGFAIYRV
SGSGMPAKQRLVCELENWGLSNVGFGKAFTDAYGDILLDHIEKSLLPLSW
AGAHDRAAPGPADFSPFMTRLKDGILPFSGLAFPVRLGAVGNGFILFTGD
DIDPSSDTIVELHGRCCHVMMDLLSLDERRSAAAEALSEREIACLQLAGD
GRISEEIAEKLGLSVHTVNAYLGSATIKLDSVNRIQAIAKAIRLGYIS
>RHE_CH01340 probable transcriptional regulator protein
MSASPGGRQIATCTFTAATETSDSLWYCAPAQPCRAACLNPDDTMSQFST
ALLLKTKTVTIRDVVCNGECRHKSDEECAHKTSLVYPYRGVFMRHVGRTD
TVAEANQVLFFNAAQSYRISHPITGGDACIDLSIDESMLEELAPKEQVQP
GPAFSFRRQRRRIDPRAQALVALLRHGLRRNVAETLEAETLALTLVRRSL
GERTSHAAGASAGRQKLVDRAKLVLSSDLARRWTLAEIASEVGVSPVYLT
QVFQQVEATPLYRYQLRLRLARALDLLGQYDDLTSLGLDLGFSSHSHFSA
SFKQAFGQTPAEFQRSAQLRRRA
>RHE_CH01037 putative transcriptional regulator protein, LuxR family
MRRGDHAARAHDRRTGAMSAVTSAVTPREREIIGWMAQGKTAAEIGTILG
ISPITVNTHISNAKAKLGVFKETALVAAALRNGIIR
>RHE_CH03127 probable transcriptional regulator protein, LysR family
MTQTAVSYQIKLLEENVGEPLFLRRPRQIALTETGVRLAPKVTEAFAMLH
DAMSTARDSVEGTLAISSTHTFASKWLAPRLGSFHLKHPAIAVRFQATSD
IIDFAREQIDVGIRWGDGNWPGLTLHRLMGLEFTPMLSPKLAESVGGIKE
PRDLLKFDLFDAGDIWWKQWFEAAGVTDPDLDRRPRNQLGSQAMEADAAM
AGHGVAILHPAFYEAEIALGRLYQPFELTRSDGKAYWLAYPENRRNVPKI
KAFRNWILEEMKAAGN
>RHE_CH01534 probable transcriptional regulator protein, MerR family
MTLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYR
PEDVDLLKGIRHLLYDHGYTIKGVQKLLKTNGNKFVISVGHGDLASVEAL
ASGAQEAGAGEPRVGMAEEDQIVGRAKPPITRRFFNFVAGDDEQPEVSIG
KSSVGKEDRALLQEALYDLLECKRLLDQVR
>RHE_CH01506 probable transcriptional regulator protein, MarR family
MNTKIKPQAVSNFRDQQDQGIRDLYMESLHLVERLHRRLLDVIKDEFDRQ
GRSDVNAIQALLLFNIGNSELTAGELRSRGYYLGSNVSYNVKKLVDLGFI
NHQRSRIDRRSVRISLTETGQDIAETVAKLYERHIASIDKVGGIGTDEFT
QMNKLLQRLDRFWNDSIMYRL
>RHE_CH03775 putative transcriptional regulator protein, TetR family
MRVSREKFAENRERILTVAGVLFRENGFDGVGVADIMKAAGLTHGGFYGH
FGSKDELALEVSRKLIDKVERRWKEHIAESPDRPLQALLDHYIHWRTVDD
PGGSCVFATLIQEVSRSRGAVRAVFSDGLSVLVDTLAGIVPGETEEERRA
NAATTLSSMMGAVILARAVEDRGLAEQFLVTMRRQLDPASRR
>RHE_CH02676 probable transcriptional regulator protein, LysR family
MGLSRSAAGKAVTRLEERLGARLLNRTTRTLSLTDEGRVFYDHGLQILTS
VDEAEASIAGQSGVPRGVLRLAVPDVFGPLVGLPLLDKYLRTWPDVQVEV
SLTDRPAELLDNGFDVAIGFGATPSAADSRLITRVIGSDKVLLCASPSYL
AERGVPREIADLAAHDCLFFTSRGQRQAWRFRSGGGWIKAQGRSRLRLDS
GQAVRDAALAGLGIALLPDFLIAADLTAGRLRQVLPDLETDDTKIVALYS
DKGVLEPRVRCFIDLLLEEIGGQGQGLRGLTPQPYQNRESS
>RHE_CH03479 putative regulator protein of stationary/sporulation gene expression
MRVTEKGQVTIPKDIRDRLKIGPGSEVDFIADEKGARLVVLSNRTEPSQD
DFESWLGSMSGTFDTNGMTTDEFMEWLRGPRDDLGPR
>RHE_PF00095 probable transcriptional regulator protein, GntR family
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIR
ELIPRLEAEGLIKTVPQRGLQIAHIDLNLIREAFQLRVFLEKEAVALFTW
SASDETIAKLVKQHRDIADAIRSGDGSHELELRAQAVDWGMHDAFIDALG
NTIISNAYRVNSIKMRLISQDRFRIDGHVGPVMGEHLKVLEAIERRSAED
AVNSLVAHINHARDRALGI
>RHE_PF00408 probable transcriptional regulator protein, TetR family
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFY
WFFKDREELLSALVARWRDKNTGNIVKQSEAYAESLAEAMLNVFDCWLNT
DLFDAKFEFAVRSWALQSDELLAEVHKADQIRLEALKRMFMRFGVPETTS
DVRARTTYLVQIGYISMQSKEELAIRMKRIPEYIAIYTGEVPQQRELDRF
FARHSYRPD
>RHE_CH01217 probable acetyltransferase protein
MTEIEDSEISLMRPLVVTIRTAKPRDLPELNEMIALLAAHHGDAAATTPE
QLERDLFGPLPWITALVAETGEGLIGYAILVPLYRAQEGKRGMDLHHLFV
RDGHRGHGTGQLLVDRARETARNAGCCYLSVSAATGNVLAHRFYEQMDFI
PRPVTGMRYMQSIS
>RHE_CH00371 probable transcriptional regulator protein
MIENKKKPNPIDIHVGSRIRLRRTMLGMSQEKLGESLGITFQQIQKYEKG
TNRVGASRLQNISSILNVPVSFFFEDAPGEHAGAAGGMAEASSSNYVVDF
LSSSEGLQLNRAFVKISDPKVRRKVVELVKALAAEADAD
>RHE_CH01311 probable transcriptional regulator protein, AsnC family
MLYAIFCQIMPKGFTKVPNLDKFDIAILKCLQEDARATNVEIAEKVNLSP
SPCLRRIRNLERSGIIRGYTADIDRKEVGLGLTVFVEFKVVHHSRENSEA
QQKALLAIPEIVSCFLISGTADFLAEVVVEDLAAYERLLTDTLLTLPNVS
DIRSNFAIRSIKTHGPLKLPEGR
>RHE_CH00282 probable transcriptional regulator protein, MarR family
MHLHIIALAGLCKINVFASMMEKTPKPTEAATSAWTSIMRTRERLLAAIE
ADLKAAGMPPLAWYDVLWELARSKDGKLRPYEIEERTLLAQYNLSRLINR
LEREGLVRREVFAEDGRGRWVLLTDAGRMLRTRMWTVYAAAIEIHVGSKL
AEDEAKAISGLLARFL
>RHE_CH02134 probable transcriptional regulator protein, MarR family
MVEDVVRTLGFLCLGSRLRRIGERLQADTQQVIDEAGVGIQAGQYPFLAA
IDRAGSLTVGELSQAVGISQPGVTRTIGQLLELGFVNMQPATDDQRRRLV
SLSDEGRKLVDHSKMTIWPRVAAAVADLCGDLDGPILEQLAAIEDGLAAA
PLIRRGANRTSRLPSDANEEECQ
>RHE_CH03650 probable transcriptional regulator protein, LacI family
MRPTVHDIAAAAGVSLATVDRVLNQRPGVRHVTREKVESAIRELGYVRDV
AAANLAKGRTYPLVFILPASDNTFMHELNAEIRQAILRSPAERTDIRTIE
VPAFDPAALVAVLEGLSREKPCGIAMVATDAPEVRAVVDRLVHAGFPIVT
LVSDLTGSLRHHYAGVDNIAAGRTAARLLGRFLGPRKGKIAVLAGSMLVR
DHRERLEGFTSVMAEEFPDLAILPVLEGRDDPEIAHMLIAEALGNADIVG
VYSLGAGNRGLIRALKEKAVDRTLTVIAHELTAHTRAALIDNTIDAILNQ
NAGHEVRSAIRVLKAKADGLAVIEAQERIRLDIFLKDNLP
>RHE_CH00427 probable transcriptional regulator protein, ArsR family
MSQAWRRNLEDENFDDLSEGSSVGAAQRVFHALSSAPRRKILAYLSASGL
TAGEIAERFSISKPAVSQHLSILETAGLIRREKQGQFVHYSLIENNLVNT
LNGFVQEVCPVGRPLKKESQARARRKELP
>RHE_PF00009 probable transcriptional regulator protein, LysR family
MTQSRRTLPPLNALRAFEASGRKLNFRGAAEELGVTQGAVAQQVRALEDQ
LGLRLFQRLARGLALTAYGTAYLADVTRAFDTLAEATGRLLDRPEMVTIS
ATPTVATRLLIPRLAELYAALPDIDLRTVATEALADFDRDQVDIAVRLTR
PPFPANLQAQMLFRQELVAVASPHLVQGLTLPLTIEELRKLPLLHDSHDH
WPVFLRTREKLPGAAFNHTTLALDAALAGQGVVLACRAFVMADLEAGRLV
RVTDATATIGPDYFLVRKRSSSPRKAVDAVWDWCAAQLSLPPASSSGREH
HGR
>RHE_CH02500 probable transcriptional regulator protein, LysR family
MLDYPALRAVATVVQTGSFERAATVLNVTPSAVSQRVKQLEERLGVILIA
RGTPCTATEKGEWLCRHIENVGMLEAELFGQLPALVDPDEPRQRVTLQIA
TNADSLGTWFVEAISNFSKTSSYLLNVAVDDQDHTAEWLQRGRVIAAVTS
LEKPIRGCRRFALGTLRYNATATPDFVARHFPDGVTSEAIRNAPALTFNQ
KDKLQSSWVRQTFGQDLDYPTHWLPAPQSFFEATLSGMGWGMNPTLLTRD
HLASGRLIELVAETPLDVPLYWQINRLAADRLGELTREVVAVAMRRL
>RHE_CH02136 probable adenylate cyclase (possibly two-component response regulator) protein
MQGSRFAFGPFVLDPDAGTLLRNDNPVAVSHRGLKLLAALVGRPGEILAK
TKLMDAAWPGLTVEEGNLTVQIAQLRKLLGPSSGGGEWIATVPRIGYRFT
GAVHRLGGVRRKILPLPDKPSIAVLPFLNIGNDPEQESFADGLTEDLITD
LSRMPGLFVIARNSVFAYKGKGIEVQRIAEELGVRYLLEGSARRAAGRVR
INAKMIDAASGDHLWAERFDRSLDNIFAVQDEVTAKIVEALLGRLRAPPP
RNRPKSLEAYDLCVRARKLMDDSPQAAEEAHLMLARAVDLDPDYAEAYRW
LAMNHWMGWVHSGGPTESNRDVALQLARKAVAIDPNDAGCRWVLAYLLAY
ARDFAEADAQFAKAIELDPNEADTFAALSDITVLAGRIDEGLEHARKAFR
LNPFPASWYYLALGQAQYAAEQYEAAIETLRRDETYRTSSRRFLAASLAQ
LGRLDEARAETELFLVANPRFSTRHWAATEPFRDARTLDHFVDGYRKAGL
PA
>RHE_CH03373 probable transcriptional regulator protein, ROK family
MNDVRPIRAKSGTNHEGTSAHNRRVMIDALRINGALSRADLARATRLTKQ
TVSNIIEELERDGLVSSQEVVRKGRGQPSTPYRLVPEGAFAIGLQIDRHV
TRAVAVDLVGTVLVRAEAVLPPGGPSTGTKAILDLVAGVRSRLAGVVQQS
EKRLVGLGAAMPGPFGLDGSGDDPWMMEAWQKFPLLETLSDGTGLDVSLQ
NDAAAAATAERMVGAAHGVDHAVCLFVGYGIGAGLILNGELYRGANGNAG
EIGMALLFADGKATPLEHRASLASLYQHLSADPADPDLHARINELASSGA
PSIEDWIEAAAADLRWSIHLIETVFDPQTVILCGSAPEALVSRLIAAIGP
LLPSVAERRGRTLPRLQSGMADPWSVAVGAAAGPISRAFDPHFAAILKDS
H
>RHE_CH03153 probable transcriptional regulator protein, AraC family
MLDHPSPPLSPSTIPMDALSEVLQDFRLSGVNYGRCELRHPWSIAFPQQQ
LLRFHFVSQGPCWIHTEVQGWQELNDGDLVLLPQGIAHRLASAPDVEGDS
LKSCQITKLGSNVCDVLRDGTGATSTLFCGSMTLGAHALNPLIALMPPII
KGCDVAGNDAVVGPLLAAMSAEATQPQMGSATVLSRMADLLAARLIRCWV
NCSGASTTGWLAAIRDPNIGRVLAAMHRDPGHNWTLESLAGVAGQSRSIF
AERFSAILGEGAAHYLARLRMQLARDLLAQNGMSVAEVASRLGYESEASF
ARAFKRVTNISPGIVRRTSSGRIDMDFGF
>RHE_PF00360 probable transcriptional regulator protein (leucine-responsive), AsnC family
MKLDRIDIKILYELQKNGRVTNVELAELVNLSPSPCLMRVKKLQSEGYIE
GYSAQINVSKLGQTLTVFTEITLKNHRQIDFARFLAAIEKVDQVIECHLV
SGGYDYLLKFVTAGIDEYQTIMERLTDMDVGIDKYFSFVVLKSPIIKAHM
PLTTLFPH
>RHE_CH03414 probable transcriptional regulator protein, LacI family
MASSRSGPNLSRIATSLGVSIATVSNALSGKGRVSGQLVERIREHAAELG
YVPSQAGRALRTGRSGVLGLVLADIANPLFPKIAQAIEFAASTAGYGVLI
ADSRGDAAAQTDAINRLVERGVDGMVIIPRRATRISSAACPVALIDTPST
PGNTVSADHWQGGREIGVHLADLGHQRILIIGNNQESSVQNDRADGIRAG
MDAGMHSETLWIGKVEQDGGSGCPLGLAEKVREGFTAFAALSDLQALRAL
TELQQAGISVPGDVSVTGFDDLIWSPVVTPSLTTVRMDMDRIAGIAVSAL
ADTIRKSHAREGVLVTAEIERVAMQLIVRQSSGPASPAPKTSEMENM
>RHE_CH00453 hypothetical conserved protein
MKGTLYLRVDAAMRAEFEADGAEPFSYRAAGREVRVRRYYAVPAHVIDDP
WLLRRCSERALHATPLPGRKRSNTTAAVTPCG
>RHE_CH00628 putative transcriptional regulator protein, LuxR family
MSNAAATPFHAGPELSRAINRTDFFRLLKAAAQHYHFDNFALARISEASA
PFGERDIVITNVAERRVGLFIATLREALGTTRAKSAQFLATPVHGRSAQS
DTYPSDLLFNEFRSGVFLFIPLFTPEGRRYCLVLSGEREEPDQGEIADML
LDAMRIFDKLYEEILTPEMSGRLTQRESEIVKWTSEGKTSAEIAIILGLS
EHTVNSHITAAARKLDAVNRVHMVAIALRNGLVS
>RHE_CH00291 probable transcriptional regulator protein, LysR family
MADDLEGISVFLAVAEARNFRLAGERLGVTRSAVSQALQRLEDRLGAPLV
QRTTRSVSLTEAGEVFLEAVRPSMRQVRDAMQTVRDMQARPSGLLRITVS
SIAERFLSGTLLTGFLQACPGIKLDITITDDEFDIVEAGFDAGVRLGEVI
EQDMIAVPVSAPQRQCSAASPGYLQRHAPPRHPRDLQNHACIGWRPRPDT
APYRWEFRENGRDFDVAVDPMITTNDMGMMIRMACAGAGITFGMVETFEP
YVDRGELVPLLEEFCPSFPGFYLYYPKRQRQPLKLRALVDYVRRSAGR
>RHE_CH03182 probable acetyltransferase protein
MPLVYRPARLEDLAASDALVVASINELTIRHGFGPMVMPSPPDFQLFSLK
GDPDGLWLAEEGGEIVGFAWSWVCGRLWFLAQLFVDPTRQGQGIGDALLE
RTLEHARKSGAVHKALITFTFNRVSQGLYIRHGLFPKMPVYFFNAGRERL
SQTLPQAPLRAVAIDNSAATLTSLGEIDCRAIGVSREKHHRYLFDDLRIT
GILLYDGNDLVGYCYVGANGHIGPLAVTHAAVLHDAFATALKLAADGSAE
KISAFLPGTCDCALSLAVAQGMRISFPMLLMASPGYGDWTQYMPRNPGFM
>RHE_PF00256 probable transcriptional regulator protein, LacI family
MEDSAGPKRSVTVADVAKAARVSKATAARVLGGYGVVSDKIKDQVMAAAA
ALEYRPNELARSMSTGRSGIIGIVVGDIENAFFSLAVRGISDAARLAGFD
VIISNSGEKLEAEKSAVDLLIGKRVDGLIVTPARCDSIEHLRHVGRAGMP
LVLFDRSIPELAVDAVTGDDREAAIAAARFMVEAGHRRLAYVSAMDPEGD
GLTDLTRISNSAVRERVEGFVSVLTEAGLPSPLHYVRLGATDQAQTDAVM
KRLLSDPSPPTAILASDSLVGLRVFKSLQSLGLSIPDDISMISFLDADWT
SVTVPPITVVDQRVYEMGKLAGERLVARIEQIPLAVERLRVSTSLVIRSS
VARIGR
>RHE_CH02611 probable transcriptional regulator protein, AraC family
MIFIPLPFVVALLLLILFATVLRRDEEVALNLPFLALILVSALQSVLSGL
RWGYGVQGVGLAAPVIAAVVPPLAYAGVFTLVKTSRRSLAARIGLHAVPA
ILILLLATFWRDAIDVALVLVFVGYAVAILLLMRPGADALRLAPFEGAVP
AYRAIIFAAAALCLSAAIDIFVFLDFISAHSERALALISVGNLAALVILG
IAAAAASRSRVPPETAEGAPRSDTSEDKETIAMVDALMEAKKLYRDANLN
LDRLARKAGIPARQISTAINRAMDKNVSQYVNDYRIGEACHLLSATEKSV
TEVMFEVGFQTKSNFNREFRRVTGMTPVAWRQRRG
>RHE_CH01191 probable transcriptional regulator protein, LysR family
MDRLTSLEVFGRVVECGGFSAAARRLNMSVTMVGNHVQSLEERLGVRLLN
RTTRKVSLTETGKYYYERSSQILAELDEADRTASALSTTPRGTLKVYTSG
AIVRFLLPVFSEYMELYPSISVDFSVGERMVDMIEDGYDLVIRTLPPDSS
LIARKLTPWRHMLVCSPAYVDSHPIPKKPSEIADHNCLQYAYYPYGDEWR
FEDGDGRQESVKVSGNVVSNNAEMLRFLTLNGRGLFLAPSFVVFDDIAEG
RLIRIMPDYKPVEFTINAVYSNRSHLPTKVRLFIDLLAERFAEHRKWMT
>RHE_CH03720 putative transcriptional regulator protein, MerR family
MKKITIGEAARRSGVKVPTVRYYESIGLLAAPSRSEGNQRSFEPADISRL
TFIRHARELGFEIEAIRTLLTLQDDPHQSCASADAIAKARLVEVEQRIRS
LMALKAELETMVEGCGHGRVDQCRVIEVLADHGQCTHSHH
>RHE_PF00530 probable two-component response regulator protein
MAAPQHDAHLLVVDDDPRIRQMLTRYFEDEGYTVSSAADGTEMRVRLRQQ
NFDAVLLDLVLPGGTDGLDLAREIRAQSDVPIMMLTGRDDVVDRIVGLEV
GADDYIAKPFHLREVHARLKSILRRRQPPARNPEAAGEEIIGFEDWKLNL
SRRQLLDPEGTEIELTTGEFDMLTTFVRHAGRVLTRDVLMDLTRGRNLEA
FDRTIDAQIVRLRRKIETDPKKPQFIKAVRGVGYVFTARLD
>RHE_CH02267 putative regulator protein of competence-specific genes
MFQGLGPVTIKRMFGGKGIYHLGRIVAVEVRDEMLLKADETSAPEFVAAG
ATQWAYEGKKGKPVKMPYWSIPEEAYDDPDLMAKWVRLAYEAALRAES
>RHE_CH02498 probable transcriptional regulator protein, LysR family
MSLPFRRPIPLLDNDVLRTFVAIAETGNFSTAAEAVFRTPSAVSMQIKKL
EEQLGATLFLRDARSVTLTRHGEMLLSYARNILALSNEAVSRFIMPELTG
VVRLGAPEDIGERLLPRILKSFAESYPGIMVDVTIDMSVGLKKRMEEQRL
DLALINCATRPFPTGGEVVFRERLVWAGARCGSAHRRDPLPISIWEDGCI
WRQEALAQLERNKRPYRVAYLSGHTMAQRAAVLSDLAIAPLPLSYVSEDM
SILGLQEGLPELGSFDIRLLTASQMSGPIETVADSIRGAFAERAKAVAA
>RHE_CH03622 probable transcriptional regulator protein, LacI family
MLPGGGHVVQKIKLSTIAETLGISTATVSLALRDSPLVAGNTREKIKEQA
RALGYIYNRRAASLRTSRSGIIGVVVHDIMNPFYGEILKAIESELDRSRH
TFILSNHYDNVEKQRTFIETLLQLGGDGVIMSPAIGTPPEDLQLAEENGM
PAILVARSMDGLELPTYRGDDSYGISLATNHLIGLGHRSIAMIGGTDQTS
TGRDRYQGYVNALRKAGIEVDPNLRIPGPRSKQGGFEAAVHFLSLPQKPT
AAVCWNDLVAIGLMNGIARAGLVPGRDISVTGYDDLEEASIATPALTTVW
NGQTEVGRLAARALLDRLAGSHEPDGMHLIKPEMRIRQSTSPHRPRA
>RHE_CH02582 probable transcriptional regulator protein
MSDRPSTRISSRKQPKQARSTELVGAILDAAAQVLAREGAHRFTTARVAE
RAGVSIGSLYQYFPNKAAILFRLQSDEWRQTNDMLADILADAQRPPFERL
RSLVHAFLRSECEEAAMRVALHDAAPFYRDAPEAQAARASGDRIIGLFMQ
EVLPSVPEASRALAGDLIVTTLATVGKQFSEAPRSLGEIETYAEAMAEMY
AAYLEKLESGRDTVNS
>RHE_CH02661 probable transcriptional regulator protein, ROK family
MNRRLILNLLRREGPRSRADIATVIGLSPAAVTFVVADLLEEGIVTEGKA
VPGPAGRRPIPVEINYEHSLAVGFKLMVDSVECVATDLATNPVAAMRVGL
EGHDPDYVADLLAGTVPELVKLAGRPKAKLAGIGISMPGVINHEQTACVR
SHRFKWDNVPLASLVASRVHVPVWLEDDTNAYAIAQQLFGLGRQHRNMAV
LAVGVGISCALVIDGKLYRGANGAAGKFGHTLFEENGRLCECGKRGCLMA
YHSELSMLRRWRETTGRDELGLPELREALSSGDATATTLVAESGRGIGTA
LANLVNITDPEVVVAGGEAVSLGDPFLNPLREALSARTFRAAPPLLPDWE
DNSWARGAAALVTQKIFDFESSGGVTDIARLGVRGSAA
>RHE_CH01160 probable transcriptional regulator protein
MELEAQFNRIEEAAAGFNTHYEVFKYMKGLTQGLGMTAFLIMTLPTVDFV
EIGATKIITNWPAEMVDYYDAHNLMVDSPVIRRMLRSTSPFNYDVEAINT
DRGEGKKSTVIDLFRRYGMEKGAYFPVHDAAGGRGAMSISGSRNFSMVEM
AKLLFIATLIYDRLSQLTLNEKHKPVAFTQSELDCLRLTAGGRKSSEIAK
LLDLSESAVNNQIGSVIRKLGCTTRTQAVVSALRLNIIRV
>RHE_CH01863 probable acetyltransferase protein
MYFVRTAGERDLEKVRVLLVESFHATYDDLHGKTKVDDLIAHLFTPAALK
ARLVRRDAEFLVADNGRNIGGMGYAALSQALTKTVMLHLLYVDPSLQRQG
IGRDIFAELETCFPDAEIMRLEVEPQNAAAIAFYQAHGFTEVGRNENSAP
GQSGIPSLIFEKTLEGH
>RHE_CH01154 probable transcriptional regulator protein, LysR family
MKNLNSVHLNGLRALEAVGRLGSLQAAADELGVSVGAVSQQVIKAEAQLG
QVIFERTARGMIAAEAGRPVLSALGDGFARLSQAVSIARRKDDTILTISV
APVFAARWLVCRLDRFAERHPDIKLRLDATTNLINPSLGDVDIGIRVGDG
RWPDVNAELLLEQEVFPVCSPEMAAKLRAPADILALPAVIDGRAMFSWEI
WMREAGLSGATLSTRHVFNDASLCLDAAIAGQGVMLAWQTLAGFSLAEGR
LAAPFGIRAKTGFGHYFITAEGVREPKKVRDFKAWIREEMAGTLALFA
>RHE_CH02362 probable transcriptional regulator protein, LacI family
MRKRATAKQVAEAAGVSKWTVIRAFTPGASITEESKRKVLETAAALNYTP
NLLARSLATNATHQVAVFVDDFANPQKLPFLETLTERLQAAGLVVMLINI
NNHFDHVHALLHADQRQVDAIILFGTAFRNETLTDHQLGRGMPPMFVLAR
DSQIDGVPAVVCDAERALKDIVDHLHERGYRRPGFMTGATVLSTALRRRQ
HFAEFWEEKGVRDIAVLSAERYSAQAGAEAVRQYLNSTNATDRVDVLMCE
NDILAIGAMDEMRGKYGLRVPEDMAIVGFDNYELGGSSAYSLTTYEQPRH
QMVELIVGMITGRVDAETVSLPGKLVIRGST
>RHE_CH01412 probable transcriptional regulator protein, ArsR family
MIENDFFRALADPTRRAIFEKLAAGSMNASALREGMEISQPAMSQHLAVL
RRAKLVREERQGRFVNYEVDPDGLALIAQWLAKYRAYWPERIAALKVLLK
DMDQ
>RHE_CH02808 probable transcriptional regulator protein, AraC family
MSQVLTPQVFEGLERLCEPQGGTLAAPAGSGILTAPAFPGIERIEAQFSG
NVFQPHRHDTYALGVTLHGVQTFTYRGERRFSLPGQVIVLHPDEEHDGGA
ATEAGLHYRMLYLEPSLLMECLEAEKIGLPFVEEPVIGDGALAKVLLGAL
GELDRQLDELFVDDFVSRVAGGLSRHSQVRRRPLGAVAWQQVRAARDYLE
AHALRPVRSGELEKITGLDRFTLSRHFRAALATSPHRYMLMRRLQQAKAL
MDEGENFADVAAATGFADQAHFNRHFKKAYGITPGQWTMLRRGFPQGRNG
ARQSGQAPARSAE
>RHE_PF00189 probable transcriptional regulator protein, AsnC family
MKLDAIDLRILDAVQHDGRITKLALAEKAGLSPTPCWMRLRKLEKAGIIT
GYHARIAPRRIAPVASVMMEVTLANHRQADFERFERAVAATPEIVACWSV
GGGVDYILKIIAADIDAYQRLVDSLLDRELGIDRYFTYIVTKTVKEETVL
PVSSFAASGEDQSAS
>RHE_CH00456 probable two-component response regulator protein
MNSQHIAFGHFEFSAENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSK
SALMDAVWPGLAVEESNLSVQIAALRKLLGPASDGSEWIATVPRVGYRFS
GRVESACDGTDGEWHAQAGSKLGIAVLPFENPGGDAEKQYLADGIADNLI
IALTRFRWLRVASRGASFKDRNGSRDPRAVGLALGVNFLVDGAIRYTGDR
IRISVHLAEATKGATVWSEHYDLQLAEIFAVQDAIAERIAAAVEPELLLR
HGLAVAPHTGNITAWDLVRQGTFNFHKVSKPTHLLARRFFREAVELDPML
PEAQIWRARVNAGLIAYGWTDDPAADGQEGLTAALRAIYLDARNPYSHYA
LAIVSAYTGRADQAILAAERSIELGSSFALGHLVLGMARLFSGDAAGARR
PLSRGLELNPHDPQNGVWFSLLMLALFFSDDVEGALEVGHTALKARPDWP
ALLRIHACCHMDLGNIEQARRFAAAASSLPEAAGDALGPFREGNTEWAAR
LEQLLREAEL
>RHE_CH00547 putative transcriptional regulator protein
MKMSDGVEQAIHSVAMLSGLSEGGVLSAAALAEFHGVSTSYLLKHLQALS
GAGILDTVPGPRGGYKLAKAAEEISLLDILLAVEGPAPAFRCAEIRQRGP
NPVSDRFFAKPCNISAAMLRAERVYRAELAKTSIADLGIELNALDDGSIA
ARGCAFLEIHERKTAR
>RHE_CH02586 putative transcriptional regulator protein
MTTTEQSYNVYEDRCPTRLVLDCLADKWALLILDRLQGGPVRFNHIRRDI
KGISQKVLSQTLRRLERNGLISRTIFPTVPVTVEYALTPLGRTLTDTVSA
LTHWAEQNMDAIFAAQRAYDERDAG
>RHE_CH00340 probable transcriptional regulator protein, GntR family
MQAVSKTNLADEAIEAIRSDIVGKRWAVGDKLPNEASLSAMLSVSRGTVR
EAVRVLVSQGYLETRQGSGTYVRSTSDAGRPLTMARRASLRDQFEARLAL
DVEAARLTAMRKTAETIAELRRLLNERGSYAGGDEAAFIERDLAFHKAVI
AASGNRAMIEIYAFFSASITDTIAATLGKDIPEPDMQAHVDIVDAIDTGD
PDQADAAVRRFMAPVLAALDRMILS
>RHE_CH03722 probable transcriptional regulator protein
MHEQSAHAEHVYTSAQRDSAAASSPVVASWRRCMTMHQLAPEDERAPLRL
TDEEFRRAREQSGQLIASATEELDRLFTIVGKAGCCLLLTDKNGIALERR
GAAGDDKEFRELGLWTGSVWTEASIGTNGIGTALADERAVAIFRDQHFFC
ANTSLSCTTAPIRDHRGRLAAALDISTCREDVNEMTLAILMQTVRDAAMR
IELNLFRSAFPSARFLVVPAGANSAAALLAVDRHDLVLGATRAARIALQL
DDKRIAAGIPAADALREAVVSQQEEMVEAEKAALLRALSRAGGNVSQAAI
ALGISRATLHRKMKKLDLH
>RHE_PF00367 probable transcriptional regulator protein, GntR family
MISTRLREPMTGTTQILRANSLAGDVYEAIFNQLMSLKIAPGQRITVDNL
VREFNVSHTPIREALGRLEGEGLVVKQHLVGYRAAPQITRRRFDELYELR
LLLEPAGAAKAAQAMDDEKLTILTEAAGVMSRSNNRDERVNYSAFARNDA
IFHDRIMEFAGNELIRETLAFQHTHFHIFRLMFHRRVTEEALGEHQMLLD
AFAARDPGAAASAMRIHIEHSRDRLLPAFDEI
>RHE_CH01205 putative transcriptional regulator-repressor protein
MRKASRLFEIIQILRLARKPMTAAVMAETLEVTVRSIYRDIAALQAMRVP
IEGERGIGYIMRPGFDLPPLMFSIEEMEAIVLSLALLERTADQELKQAAR
RVNQKISGAVPAPLRQAMNNKALYAWGSTAQPAGFDLAVVRRAIRDERKL
MLAYRDELGRATERTIQPIALIYYSQTANVVAWCELRRAIRNFRSDRVEH
CAAAEAFFKGDGDRLRELWTSGWAEKAVAG
>RHE_CH02319 probable acetyltransferase protein
MTATVRPLEPSDRTAWEPLWKAYQRFYEVVISADTTDLTWARFHDPDEPM
HALGAFDEDGRLVGIVHAIFHRSCWLPQWTCYLQDLYVADSQRGLGTGAA
LIDAVAALARANGAGRLYWMTHETNATARRLYDRIAERSGFIQYRKAL
>RHE_CH02449 probable transcriptional regulator protein, LysR family
MTPRQLKTFLAVIRHGNLTRAAAEVNLAQSSLSDQIQALEEELGAELFVR
SRQGVVPTPAAAALKAYAEEILALNGEAKDAVRSAAGNAELSVILGTLET
IAAERLAPWLSSLRRQNPGLALKLKVGGSGELHAQLQNGSIDVAFTFDRD
HEDERFATRHICSEPLVLIAGRNAQLYSFENLAALSTAHFVATEAGCVYR
HLFDNAFAEAGVTPPPIATEADSIATIIRLVASGTGYGLVPRLAIGLSPA
HSDIVELSWPGKPPAASLVMRWRRRRVQPPALALILESAREHLSPVRPAD
VRPRHAGLSLS
>RHE_CH00601 probable transcriptional regulator protein, TetR family
MEENRVKLIAAARKAFAEKGYAAASMDELTAEVGLTRGALYHNFGDKRGL
LAAVVDQIDTEMASRAKEIGARAGDDWQGLLAEGAAYIEMALDPEVQRIV
LLDGPAVLGDPSQWPSQSSCLQATRQTIERLIVRGALKPVDAEAAARLLN
GAALNAALWIAATDRPQDLLPRAVEAFDALAAGLLNTSA
>RHE_CH01743 probable transcriptional regulator protein, AsnC family
MKESGNFRRKLLQLIQADGALSLADLAEKAGMSQSSAWRKIQELEADGVI
RKRVTLLDPGKLDLKLCVIAHVTLEDHHEEAVASFASVVLERPEIMECYA
LSGAFDYMLKIRARDVESYEAFMTRYLMRNPHVRTVVSSFVLRELKFSTE
LPL
>RHE_CH03668 probable transcriptional regulator protein, LacI family
MVKLKRGTHTAYSEASSLRLRAAWLYYNEGLTQKDVAEQLGISRTTVIRL
LDESMKRSEVQIWINDSIGDCVELSVKLERAYGLDEAIVVPAPVHCDVDS
LAKNVGLALGQFLSEAIPDDYTIGVGWGRTMTASLASFRPPRRANCKVVS
LLGGIVAVHQTNPIDYTWRLANQLGAECYMFLAPLLVDSVETKRNLIDKC
GLDTIYRLAENLDLAIVSCGDIGPHSTSLSEGWISKAELQELITAGCVCD
TMFNFLDKEGNSVDHSINQRVMSVDLDMLKEAKHIVLSSGGAHRATAIRA
TIKRIGCNTLITDEGAAQALLELAEQA
>RHE_CH02767 putative transcriptional regulator protein
MSGKVISLKNRVSGMRREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVL
AAEPRRFGELRRMLPDISQRMLTQTLRDLQRDGYIAREVFPTKPPSVEYS
MTELGRSLYQPLSQLLNWAEANHDAVRAARSRFDSADG
>RHE_PF00433 putative transcriptional regulator protein, MerR family
MKLNNEEDRFCDILDNANGSIMSVDIGSRLRHLRIAHKLSQRELAKRTGV
PNSTISLIESNASNPSVGALKRILDGIPIGLAEFFAFEPERPKKAFYAAQ
ELVEIGKGAISYKQVGETLFGRSLQILKECYQPGADTGKIPLVHEGEEGG
IVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTP
PTF
>RHE_CH02577 probable two-component response regulator protein
MRILLIEDERELAGALSAALGKHGIVTDHTMHLGDAVELTRQNHYDAILL
DRRLPDGEGLRFIPELRRTGRDTPIIVLTALNEPKQRVEGLDLGADDYLG
KPFLVEELMARLRAVLRRQPNLSELKITAGRMVIDPLHLSVTVGDTPLDL
PRRELLVLAALAKRKEKTVLRSTLEAAVYNYEEKIQSNALDAHISRLRKR
LTDAGAEVSIHNIRGVGYLMREE
>RHE_CH01765 probable transcriptional regulator protein, LysR family
MLPNPTLDQLQVFLTVAETGSFSAASRTLNRAQSVVSYTIANLEAQLEMP
LFERFGARQPKLTEAGKAMLEDARRILGDLQVMRARVKSLKEGLEAEVSV
AISVMVPSRAVVDVLHEFRERFPTVSLNLNVGELGMVMDLVLSGKATIGI
GGAVLKQDDAIITERIGHSFMLPVAAPNHPLAQISRPLTLGDVREEVQLV
VTDASGRTKGRDFNVLSYKTWRVSDIATKHQLIKAGLGWGGLPAPIMHDD
LRSGALVHLDLDAYEQGEYAIYSMRQLANPPGPAASWMIDAFRTRLSHCP
NQADFHAEMAELRDAIPPLAAE
>RHE_CH02431 probable transcriptional regulator protein, ArsR family
MSNVQDVLFRTLADPTRRALFERLCREGEKTVGALTAQAGVSQPVVSKHL
GLLKQAGLVRDRHEGRQTHYSAQLGALAPLVDWTSEMAGFWQSRFNALED
LLKRMDQ
>RHE_CH00799 probable transcriptional regulator protein, TetR family
MGAESMDRIGLRRKPKQERSIQRLDLILAAAAKIIAQKGVSAMRMTELAV
AAKVPIGSVYQYFPEKAAIVKALFDQHASAIQAKTAAMFRDVQSLDQALD
LVCATIDWYYESYRDDPVYRGVWMGTETDQDLLRLNIEHSGRVADIFDDA
VRRLAPDLCDEEMFARTYLFSHLIGAVIRLAAVSEETIARRMLGEWKRVI
RASLFAASGSSAA
>RHE_CH01263 probable transcriptional regulator protein, TetR family
MPRRRTLSDEQLLAIVLGLIHAEGPDAATFAAVAKASGLSGSTLVQRFAT
KAAMLRAALLYAWDRLDAETERLAGLVAKTPEGAVALLLGLSQDYGDNAA
AYGEGLLVLREDFRDPVLRARGAAWGKALTAAIASCFESAPAPETIARLM
LSQWQGSLTWWGFGSEEPVSAYVETELRRFLAAVKI
>RHE_CH02770 probable transcriptional regulator protein
MPDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPEGPVPIADMANAFGV
THRTLHFYEEKGLISANRIGLMRVYGQDDVMRMAVITVCRETGMPIAVIQ
ELMDELRKADSQESAEAMFREALQVRKRELTAEMSTLHRQLQQVGDLLDF
DDGIETQPLNDNQDSSSLTVQELRCLELMAEGYSTQRIARALDLKHDETR
DLEAGIILKFRANNRFQAIAKAVLLGIVQA
>RHE_PF00130 putative cold shock protein
MTIGTVKWFNSTKGFGFIQPDDGSADVFVHISAVERAGMSSIAEGQKLGF
QLEHDRKSGKMSAGQLQAA
>RHE_CH01433 probable transcriptional regulator protein, AraC family
MPLAEVESARFWRDSRFRDMECLSATFLTHEYAPHAHDTFSIGAIESGTQ
IATLSGRREETGPGDLYLIDPGVIHDGAPGGEGYRYRMIYPDMKLFIDIL
EDVTGKAFHATPSFSSGLPRDPELANAFHAAHRTLENGAGALESDEGMFS
VLAAIFARHGSAIVVPVDTRERSAVARAREYLIENFDLDVGLEELAGVAG
LSRAHLIRAFRKEYHITPHAFLTDRRVQVARRLLRQGHMPADIALECGFA
DQAHFTRHFKARTGVTPGQFRLG
>RHE_CH03587 probable two-component response regulator protein
MRILLTEDNIALADGLSAILRGTGHAVDVVHDGASANAVIAAENFDLVIL
DLNLPEMDWLDVLRAMRARQNQAAVLILTARGTPEERVKGLDLGADDYLI
KPFDIAEFEARVRVLLRRQAGLRSATVGFGGISFDLNSRTFSSGDTPLDI
PARELGLLEILFMRAGKVVAKEAIIQSLTAFDDDISANAIEQYVSRLRKR
LSPHGLTVKTARGIGYYLDKLPEAS
>RHE_CH01976 hypothetical conserved protein
MPDEEEHGFLHGLKLPPGYAENEQAFLDARAQAQKLMASIKQPLVQFDKV
DTENGVIGPTVVKKNPPFPSRALVIAACDMLKVLGHSGFDALLLRWDLPA
GVGDGSGLAARATSLAKYALSDPELRTAEGHALQSEIAREAGEIYRAGWM
TNIGEKERDAFKRASAVAGSMDDVTESGMLVYGTNDVQNAAVNVPGRPAK
PKSNKVFIVHGHDEAALEKLARFLEKVGLEIIILKEQPNQGRTIIEKYEG
CADEVGFAVVLLTPDDVGSAAAATGQAQRARQNVIFELGYFSGKLGRGKV
CLLRKGNVEMPSDLFGVVYTDMDSSDGWKMALVKELKAAKLEFDPNRLWE
>RHE_CH03029 probable acetyltransferase protein
MTVFIGFAGAHAATVTLIIVPNLTRGGATYALIENVVTHAEDRRRGYANA
VIGHAVNEAWKAGCYKVMLLTGSKNPATLRFYENCGFLQDKTGYQIRRQ
>RHE_CH03685 putative transcriptional regulator protein, ROK family
MKACNSPSTVRADAEGQRNGRQAMIISFDIGGSAIKGGIARSETDIVPLG
RRPTPKDDFAAFVETLRDIIAEIDEQPSRIALSIAGVVDPDTQRLTCANI
PCIHGRALAADLETELALPVLIANDADCFAMAEAGLGAGRGHRIVFGAIL
GTGVGGGLVADGRLVNEAGGFAGEWGHGPIIASAAGNPPVAIPAYACGCG
QKGCVDTVGGARGLERLHKTVHDLDLASEEIIDQWRRGEKKATRTIDVYV
DLVASPLALTINITGATIVPVGGGLSNVAPLLAKLDQAVRTRTLRKFYRP
LVVPSECRIEPGLIGAALLGLKADADAS
>RHE_CH03364 hypothetical conserved protein
MLTKKGKYGLKALVDLARLAPGETAFINDVAARNNIPKKFLDTILLELRN
VGILRSKKGPGGGYSLSRPASEIRIGHVIRTLDGPLAPIRCASRTAYEAC
DDCADPETCQVRRSMTDVRDAIAAILDNMTLEQFVAAGGRIEDAGDDLPI
SAVS
>RHE_CH02764 putative transcriptional regulator protein, MarR family
MSDIVLIETARDFNRFYTNFLGLLNKAYLDSPYTLTDARILFEIGSHAGV
SATALARDLHLDPAYLSRILKRFRAEGLIETSPDPADLRSQIINVTDQGR
EEFEELGRRANAQIATRFDTLAAGEPQAVVSAMNTIRALLDPAAKRAPAI
IRAHRAGDMGWIVESQSRFYTEEYGWDLRFEALVAEVAGKFLANFDPEKE
YCWIAERGGVNVGSILVTNSGDGIAKLRLLYVDKSARGLGLGKLLVDECI
RFARQKGYRQLSLWTNDMLETARGIYIKAGFRLVSEERHKMFGPEANGQT
WILDL
>RHE_CH00909 putative transcriptional regulator protein
MKNNPIPQCPVARGLQSVGDAWSILVLRDAHAGLTRFDQFRKSLGIVPTM
LTKRLKALTEDGLLEKRLYSERPPREEYVLTEAGRDFLPVLMMIGAWAHR
HCDGELARYIDVESGSEIEPIAIDAVTGAKLGTRSMRMSLQPQSEPSDR
>RHE_CH03188 probable acetyltransferase protein
MEQKLLRHRLASHSDLADLKLLMDAAISENQKPFLTPEQISSSRAFMGLD
SQLIEDGTYFVVEIGGVLAGCGGWSRRATLYGGDRTPGRDAALLDPAKDA
ARIRAMYTHPNFTRRGVGRRIMALCEEAARNEGFRDIELMATLSGEPLYL
VCGYQAIERVEDGRGGANVPLIRMRKPLHG
>RHE_CH02889 probable transcriptional regulator protein, RpiR family
MDYDSVVNFGWENGARPSRGACYVTVASKTVSDVIHSHFGALTRAEKQLA
ESLLDNYPVSGLGSITTIAENAGVSTPTVVRMVQKLGFKGYPDFQAHLHL
EVEATISNPIAKHDRWAQNAPGTHILNRFADAIMGNLRQTLTDLDTATFD
SVASLLSDRKRGLYFVGGRITGALAEYFFTHMQVIRPATTLLSSNSSSWP
QYVLNMNSGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWGSPAA
KLARHAFRVRIEAPSAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLE
GLFEQTKLFRKPG
>RHE_CH00565 probable transcriptional regulator protein, TetR family
MLLSKILNHRCQDEGRVTGMAVKENLRPGGRSARVQASVHKAARDLLAEF
NRTEVTIPLIAARAGVTPSTIYRRWGDLQELLADVAVERLRPDMQPVDAG
SGKADLQAWAEQYAEEMSSGPGREMIRDVLAAQAGANASKCCEYTRQQIV
VIADRAKARGEAFPDVDLVMDQVVAPIMYRILFGDVPDAARVCDLVSRIM
SAPD
>RHE_CH00251 probable acetyltransferase protein
MPDIRSLSAEEAHAAIPALSEVLADCVRGGASVGFMQPYGPEDAERYWLD
VVDAVAGGGSLLLVAELDGRIVGTVQVGAAQMPNQPHRGDLKKLLVHRSA
RGRGLARLLMEAAEREAAARGKTLLVLDTATGSNAEAIYPRLGWQRVGVI
PDYALWPEGGFCDTTLFYKRLA
>RHE_CH03623 probable transcriptional regulator protein, MarR family
MGNVISQRRRGLKIKGMAMGKKHKDGKKSKSKKKDQTEYTLIDLSPALTQ
AARSMRTVLSRNLFESGLYAGQDGVILSLAESDGMTAGGLAQKLGVKAPT
MTRTIGRMEAQGFLERKPDAEDARLTKVYLTPLGRDSVRAIEMAASACDR
LATQEFSEKEIRNLVRLLKAIDANLQAEAIHIEEPDED
>RHE_CH02142 probable transcriptional regulator protein
MDQRRKGNRLASTKTEQRGSLRESTYLQLKDLILTGQLRPSERLSEVTLA
KRFGVSRTPLREALMKLEEEGLIVGQRNFGYTVTDLDVTKFCNLLVVREA
LDVCAAQLACEVASEEDLDRLREVIAQMVELKDTTNKTPSDAARNLDLGL
YIHRVIVESTRNEALVRVTDQVYQQLRLALWLEVLWVDLEHTDLDEHRAI
ADAICARDRDAAAAAARAHVQSSLKNMSKLQRIWAHRRAPD
>RHE_CH03630 probable transcriptional regulator protein, LysR family
MRLWADWEIRIFAFIIKRFFDPAAKKIIEQNGPICSTFQNTCGDFMDTLT
RIRAFIDVVEAEGFSAAARRTGRSKALLSKYVRELEDELGALLLNRTTRQ
FSMTEAGHTYYRSASDILKEIDNLADLVRENNAQLKGRLRVSVPRTFVDA
DVGQSLIDFAGENPDLSLEIAADDRFVDLIEEGFDVAIRISKLEDSGMIA
RKISDFRVHLCATPDFLERYPDLDHPSDISNLPFIVDTNSRTQGSIRFHN
PDNTTFAVAVAGPIEVNSPHATLRAALAGIGIALIPDFIARKPIESGELV
TLFNDYIPTDRGIYAVYPHRRYLPAKVRIFVDYLHSWFKKHP
>RHE_CH03059 putative acetyltransferase protein
MGSACRLRFTAWGWLFTNMLYIPDTLRGAGLAGKILHKAEEEARARGCRG
AWIDTFSPQALRAYLRQGYEVFGELEDFPEGRTRSFLRKKL
>RHE_CH02729 probable aminotransferase protein
MLNWDTMFASRSSRMRASEIRELLKLLDQPDIISFAGGIPDPALFPAEEF
QRAYADIFSGAAVNSALQYSVSEGYKPLREWLAGQMGALGIPCELDNVFI
VSGSQQGLDYLGKLFLSPNDTALVTWPTYLGALQAFNAYEPAYDQLTPNG
NRTPESYRAAAAAAGGKVKFAYLSADFSNPTGETVDLAGRKRVLALAEEL
DIAVIEDAAYQSLRYDGEPIPPILALEIAEKGHINDTRTIYCGSFSKTLA
PGLRVGFIVANAPVIRKLVLMKQAADLHSSTINQMAISDVALRGFDKQVT
KIKAAYSQRRNCMLAALEKYMPKGTGWTKPEGGMFIWVTLPEGMDGAKLL
AKSLETARVAFVPGKAFFADGSGANTFRVSFSCANEQMIEDGIGRLGKLI
SAEIGG
>RHE_CH00536 putative transcriptional regulator protein
MLSHKQIWEAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRW
PSTESIAKVLDATGASMEQFLAFMQPASSSSGERIGERAGPSPGGAIPLL
GFAQAGAGGFFDDGGFPAGHGWDVVEFPPKPSQRSGVYALEVQGESMMPL
YRDGDVLIVEPGAQVRRNDRVVVRTCTGEVMAKVLLRQSPRSIELMSLNP
EHPNRTLDLADVDWIARIIWASQ
>RHE_CH01572 probable transcriptional regulator protein, LysR family
MHKDFFGMLLNLDQLATFINVADLGSFTAAADKEGVTQPAVSLQIKGLEQ
RLGVRLIERVGRRAQPTAAGIDLLSHARRLLQQAAASEEAMMPHRDGASG
RVRIGSGGTASIHLLPRAIAAARKSMPGLEITVSIGNADDILRDLEANRL
DIAVVALPASGRNFEIEPFYEEELLAVAPPGSPVPKGGPDAAFMRDRTLL
LYEGGNTRRAIDAWLAAPNTRIRPAMEFGSIEAIKELVAVGLGWSILPGL
AVRRDRAGLLTTSSLQPKLTRRLGMVLRRDKHLTRGLREMIKCLRAFED
>RHE_CH00011 putative transcriptional regulator protein
MAEALNVSPAYLSALEHGKRGLPTFDLLQRIAGYFNIIWDEAEELFLLAR
SSDPRVVIDTSGLPPEYTEFANRLARRIRKLDSAEIARLSAILENGGKGD
GKAS
>RHE_CH04051 putative transcriptional regulator protein
MKPIFVQLQCAPGKTYDVADAIYQTELVSELYSTSGDYDLLLKVYIDEGQ
DIGKFINDNIANIPGIVRSLTTLTFKAF
>RHE_PF00387 putative transcriptional regulator protein, LysR family
MQFRRRLPSLTALVTLEAVLRRKSFTTAASELGVTQAAVSRQIAALEEEL
GQPLFLRKHRAIKPTAACVSLGATLAKSFADIAESVEAIQSRSQDVVTIG
ATVAFSSFWLLPRLAEFRRANPGILVRVISQDNPITLDDGEIDVAIRYGL
PPFSDGTVIASRGDVVCPVCSPDHLRRRGNGPLSSTDEFIETEVIDRSWY
GWGQWVSLTGGNIEVKPSLRFNHYTESIAAARAGQGIALGWRMLIGTFLE
DGTLVSASGIELAAEGRYNVIVPIKAKRSHAGDLAAAWLTASLHG
>RHE_CH00292 probable transcriptional regulator protein, AraC family
MRDDVFPIPTRALIRQGGRACFYRLVNTTPLLIQVQSGTKIVMSDDKPLR
LEAGDYGLLPDYRPLTMENIPKAPQKYQTLALPIPRQLFEDAYDRMGSVA
VPSRPLPASTSGLPEEAAALFEYCCQPGNLARLPGAIAKARLMELVTWFA
LRGAVLGRCESSRLEDRLRQMIEADPAAAWTLAQAARLFNMSEATLRRRL
SGENTAFSEILTDTRMNRALALIQTTTLPMAQVALEVGYDSPSQFSARFK
ERFGVSPRHVRSGTEQFERIGAEIEQSGADALAR
>RHE_CH00074 probable transcriptional regulator protein, LacI family
MSDEKVRRPRQADIATLAGVSVSTVSRVLANEPGISETVRRQILKVAAEH
GYPVKPAAEAVAGGLALIASDGVTGGLSVFYEAIVDGLRTGAAEAGMPFE
IRLVREDRITPDAVRDYMQAAGAAGLFLVGIDPNDSLRDWLQVTTTPTVL
VNGTDPRMQFDGVSPANFFGAYEAVSRLMRAGHRRILHLSGSHRHTIRER
IRGFEAAIAAVPGAEGRFVSLALQGSASREAHERTTAVLAENAGFTAAFC
MNDFIAVGVLEAVTEAGLRVPEDFAIVGFDDLPCALMTNPRLSTMRVDRA
ALGREAVSLMLSRFRNRTAAARHICQAVVPVSGGTIANAENP
>RHE_PF00120 putative two-component response regulator protein
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPD
AAIIDIFLRDGECIEVAEILVARGVPFVVHSARRGVERESHQVFLNGTWV
PKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA
>RHE_CH03968 putative two-component response regulator protein
MTARTILLVDDDEDLRQTLTEQLSLYEEFTVLQEANAGKGVATARSTPVD
LLIMDVGLPDMDGREAVKLLRKGGFKAPIIMLTGHDTDSDTILGLEAGAN
DYVTKPFRFAVLLARIRVQLRQHEQSEDATFTVGPYLFKPSQKLLTTDNG
QKIRLTEKEAAIIRYLYRAEQKVVTRDVLLEEVWGYNSGVTTHTLETHVY
RLRQKIERDPSNAEILVTENGGYKIIP
>RHE_CH03249 probable transcriptional regulator protein, TetR family
MIRERDNPNPPASARAEIARQKMLTAALDVFGRYGFEGASTRQLTEAAGV
NLQAIPYYFGSKEGLYIATAEYLMMQIDSHVSGMRARIGAHLMALDAAGE
PLGKTDARLFLTEVLQTMVTLFVAKESEPWARFLIREQMEPTEAFKRVYQ
GIMRPMIEMGRRLVGAILGEDPASEHVRLRTFNLVGSILIFRFAHASVLA
QMEWDAFGPEQVEILRGVAAELADVIGSPKGGAA
>RHE_CH02727 probable transcriptional regulator protein, MarR family
MKDTTSNDLADVPQIDEMLCFSIYSASHAFNQLYRPLLDEMELTYPQFLA
MTALWARDDRTVKDLGETLFLDSSTLTPLLKRLENIGLVTRNRNPADERQ
VLLRLTKKGLALKSRATHVFDCIGKAVGLDPETVGKIRDTIASIRDNIHS
RDKDEA
>RHE_CH02872 probable methyltransferase transcriptional regulator protein, ArsR family
MMSEPLKLGLDGLVDVLKAAGEPTRLRLLALLDAGDLTVTDLTEILGQSQ
PRISRHLKLLGEAELIERYQEGAWAYFRLKQDGKAAMLVRALLKHVSEND
ATVLRDGERLAAVKRQRAERAQAYFSRNAAEWDELRRLHAADEEVDAAVI
RLLGNQPIDSLLDLGTGTGRILELLAGLYRRAVGVDASRDMLSVARANLD
KSRITKATVRHADILNLPFEGQDFDLVTIHQVLHFFDQPEIAIAEAARML
RPGGRLVVIDLAPHTLEYLRDEHAHVRLGFSHQAMSDWLRKAGLDVEQVV
DLHPGQQSGQGLTVTVWLARDPRRPMASQTSEGAEPTFAGRV
>RHE_CH00800 probable transcriptional regulator protein, LysR family
MSAPLDLDQLQTFIAIVDSGSFTKAADRVYKTQSAVSMQMRRLEERIGKQ
LFIKDGRGNRLTVEGEKLLNYARRIIRLNNEAIAAFDDNRLEGTLRIGTP
DDYADRYMPEIIGRFAKTHPNVELYIVCEPSVDLAERMHKGELDIALVTH
NPRERMSDVVRTEPLCWVGSANHPIRDDAPVPLAVGRRDCQWRQLACSAL
DAVGREHQILFTSWSCTVVAAAVLAGMAVSVMPESALRTGMKVLSQADGF
PALPPVQIGIMKRPGVSLSLMNAITAHITACLDNITPAVVDDGLDADVKS
AQARLYPRLKAANMVPSW
>RHE_CH00329 putative acetyltransferase protein
MAKGLDSAGLTFQQDYFGDPAGWAALVRLLQDIFGIDIGPLQQLGGPDPT
SMPFGWFDTEGELAANLSAFALPFILNGRLVHAAGLQSGAVRPQWRGRGL
YRDLTVKALGWCERQGFDAVILYTDKPSLYEAYGFRAIPLNPYEGTAPAP
TIGATPARPLLPANADDLALLQLLLKARSPVSTTLSVAMNAAMFLINTQL
DPDVRISFLEDCQAVIAWKIDGTGRFSLLDVVAAEIPSLAAILGGLDIAS
ASVEVLFRPDKLGWTGAPQSFEVGTTLMLRGLGDDAPHFPAMLSPMADF
>RHE_PF00188 putative transcriptional regulator protein, GntR family
MTNWRPDPSQLRRPAYLSLAEQIANAITDGKLSDGTQLPPHRKLADDLHL
SVQTVSRAYDELSRRGLISGEIGRGSFVQTRPREPEPPYLPERLGEVIDL
SILKPVCEQIHLERLRQAFGWLSENLPSSSALSFRPNMVFPRHRVVATEW
LARCGIDVSPLNVSLTNGATSGMTVALMSVAPPGSTIATEAISHHTLVPL
STYLGLHLEGLAIDEEGMIPEALDEACRTGPIRAIFLQPSVINPMAALMS
AERRQALATVAAKHDIAIIENDILGPMVEDRAPPMAAFAPERTLYVTSFT
KITVPGLRIGYLVAPDRYVAAVANRHLVSSWMATPAMAEIATRWVSDGTA
MELVNWQRRALVGRHAIAAEMLAGLSYRTHPQSLHVWLPLSGSHTEDGFV
SQARLRGVAIAPGKSFHTADHGWTPAVRISLGSTTEGELRTGLGIVASLA
QGNPEELLLAI
>RHE_CH01207 hypothetical conserved protein
MVPDQNSPPLSTLQELKRLIASRRLVFPVGLERVAREILETPDITAFESA
AAVARRCRVSPTTVHRLVRHIGFQTFGEFRAMIREHLRSTAANHR
>RHE_CH02666 probable transcriptional regulator protein, GntR family
MNEEQAGRTRVETVVATIRQRIAGRSLTPGARLPSVRGLAASMKLSTSTV
VDAYERLVAEGAILARPGSGFYVANQAAPFALAETGPKLDRAVDPFWISR
QSLEAGESDLKPGCGWLPPAWLPGEAMRRGLRTLSRADGPALADYGQPLG
LPPLRQLISRRMGERGIEASPDQIMLVESGTQAIDLLCRFLLEPGDTVLV
DDPCYFNFHALLRAHRAKIVGVSYTPSGPDIDQFAQVVAHERPRLYITNS
AIHNPTGAVLSPVTAHRLLKLADQFDLTIIEDDIFADFEYSPAPRLAAFD
GLERVIHIGSFSKTLSASARCGFVAAKPEWIDGLTDLKIATSFGGGRLTA
ELVLNVLSDGSYRKHMETLRNRLSRAMGEVSARLKGLGITPWLEPQAGMF
LWCRLPGGVDAADVARAALERKIVLAPGNAFSLSQSATNFMRFNVSQTLD
ARVFAVLGDVLGR
>RHE_PF00220 hypothetical conserved protein
MPTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPA
SRFEKLRGHAGKGLDTNAIMALTRGET
>RHE_CH00729 probable transcriptional regulator protein, LysR family
MNWDDVRIFLAVARTGQILAASKRLGLNHATLSRRLTSLEEALKTRLFIR
RTNGCELTAEGEVFLHAAERMETEMLAVQANLGHTDTAIAGTVRVGAPDG
FGVSFLAPRMGRLIERHPELKIQLVPVPRSFSLSQREADIAITLERPEQG
RLVSSKLTDYTLGLYASRDYLAAHGRPGDVEALKAHPRIGYVEDLLFTAS
LNFSGEVMRSWDAGFEISTAIGQTEAVRSGAGIGILHDYIARQYPELQRI
LPEISIRRAYWTTYHETARDLVRVRSVVDFLQELVSAERQIFL
>RHE_CH03696 probable transcriptional regulator protein, GntR family
MKLESTEEQGRTESSRSERRPRVRRNVTAAIAQHICADRYPSGSPLPREN
DLCELYGVSRTVIRESLKVLESKGLVRGKPRVGTTVCDRDEWNILDAEVL
DWMGPYIKDFDLLGCILEARRTIEPAAAEYAAERASAQEIADLDKAWRQM
RDSASEPESFTDADVMFHAVLLAASHNQVFRRLSSAIHAALKYALHASNI
AVENREDAVLVHGELVEALRMRDKAGARECANRMLDLAVRDLAAAEKAIG
RTK
>RHE_CH01122 probable transcriptional regulator protein, LysR family
MDKVGLSFDRMRTFVRVAERANLSMVARELGVGQSTVTRHLNELEEAVGV
ALLSRTTRRVTLTEEGSRYYTNCLQILRLVEQAAEEARDARQAPAGAVRL
SCTAALGVMHVTRMIFDFQDRHPDIRVDLNLTDERIDLVREGVDVALRLG
PLADSSMKLHAIGESQRLLVGAPAYLSAQGRPERPADLSRYETVVMSNVA
GSNQLLLSAPDGTSLVIPVSGRLRVDHGLAARAALAAGRGIGPTHLWLVH
DLLDDGRLEVVLGDHRPSPVPVSLLIVPERAAIARVRLLVDFLAAEVAKL
PGIRPS
>RHE_CH02745 probable transcriptional regulator protein, TetR family
MTLSVDTAEPSEFSPRQNAVLEQALRLLVDGGEKALTTSGVARAANCSKE
SLYKWFGDRDGLLSAMIAYQASKVRTFERNGERLTAASLHDHVVIFARDL
LEVLAGDVSLALNRLAIGQSHRDGSKLGKLLLERGRRQIDRRAMALIDAG
KRAGLLRFADADEAYHTLYGLVVSDLHVRMLLGEPGLKDTARQAEKAVTA
FLRLYGTEKVLAEMPALG
>RHE_CH01734 probable two-component response regulator protein
MTQITVGVVDDHPLFREGVTRSLSEMSDFVVIGEGASSEDAAMIASNNRP
DIMLLDVSMPGGGLAAIGNVLALSPTTKVLMLTVSEEVDTLLGALQEGAM
GYVLKGVGSRGLAEAIHTVLSGSRYVSPTMSAKAMENSLQNGSSDKNSLT
PREREVMDLVAQGLSNKHIGLRLNLQEKTVKHHMTQILSKLGASNRTEAA
LQWRERR
>RHE_CH01772 putative acetyltransferase protein
MGKTPASLKAHITRLEMTAPPKASMPVPVNIQTAIMRAPGIPLPFYRYLY
RQVGARWQWVDRLRMSDEQLSEMLNDKRNNISVLYVNGAPAGFYEYFCED
EETIELSHFGLIEHALGLGIGKWFLLQALYAIWALDPKRVTTTTNNLDHP
RALQLYQMYGFSPVSTGTGIVRPLSDKELLELARKG
>RHE_CH00267 probable transcriptional regulator protein, LysR family
MNRTQLSQLAVLAAVSEHRSFRAAARELLVAPSAISHAISSLEESLGVRL
LARTTRSVAPTEEGRLLLERLRPALEEIDVALEAVRDTRGKPAGNLRITA
PRFASDILLAPRLGDFLNLYPDITLEIANEDGFTDIVREGFDAGIRLEES
LEADMIAVRISPKLTTVIAASPDYFERYPKPEHPRDLVHHRCIKRRFTNG
SIYRWEFEKDGQELIVAVDGPLVVSEDRLALLAALNGAGLAYLFDMRVHA
ELAAGRLVRVLEDWCAPYPGPFVYYPSRRQMRPALRAFIDFFKYAETGKG
GR
>RHE_CH02284 probable transcriptional regulator protein, GntR family
MTNWLPDLSRGSGPVYLRLADSIESAIASGALPAGSKLPPQRNLAYDIGV
TIGTIGRAYALVHERGLVAGEVGRGTYVLNRAETPPGEQTDPLAVSLGGT
RFQDAPADKIRFDTTAAPDLGQGKIIAAILAEIGEQHLTEISSYSRSFPR
NWFDAGRRWLARSGWTPEVENIVPTLGAHAAAVAVIAAVSAPGDKIVFEN
LTYTQVSRSARLLGRRTVTVDSDEFGVLPDDFERLCQQQHPKIAFLMPTV
HNPTVTVMPYERRATIAAIARKHSVWLIEDDLYGGMADDETPLIAALAPD
RTFLVNGLSKSVAAGVRGGWVACPPHFAQRIKVTHRMVTGGLPFILAETC
ARLVESGRAHEIRREVIGELSRRAHLAREHLQGFDFASHPHAPFLWLKLP
EPWMSGTFKNAAFRDGVLVDDEDEFKAARSEKTYYRIRIGFSSPKTGQEL
TAGLMILRRLLENGGSAYDGEI
>RHE_CH02977 probable transcriptional regulator protein, ArsR family
MDKDEIIKALAHPTRMDILSWLKNPEEHFPTQEHPFEMGVCASQFERCGL
SQSTVSAHLGTLQRAGLVTTKRVGQWIFYKRNEETIAAFLKQLKQDL
>RHE_CH00526 probable transcriptional regulator protein, TetR family
MRVSRAQAEANRETVINVASRLFREHGFDGIGLKDLMKGAGLTQGGFYKQ
FRSKDDLAALASGRAMESAIRRWSRVAAGSSDPFGAVVGMYLSTGHQEEK
GDGCPLAALGSDAARQSEEVRAPFQNGIEAHLQVLDELIPASDGTKQYEK
AMVVLSLMVGAVTISRIMTDQAMSERLLETAADAVKHIAGGTEEE
>RHE_CH03511 putative RNA polymerase sigma factor protein, ECF-family
MPPDAGRAAEQVARQSYGKLIAFLAARSRDVPAAEDALSEALAAALRVWP
ERGVPDNPEAWLMVAARRNLMQAARHRTVQANAQATISLAFEEAEERMNE
AGKSVFPDERLKLLFACTHPVIDRSVHTALMLQTVLGIEARTIARSFVVS
PEAMSQRLVRAKVKIREAGVPFAVPSGAALSGRLAAVLSAIYAAYGLGWD
GLDGEEERHSLAGEAIWLGRALLTVLPDEPEAIGLLSLMLHCEARRSARR
DGNGRYVPLDEQDTATWNAIMITEADVLLRKAGSFDRFGPFQCQAAIQSV
HAARRFSGATDWQALTTLYAALVTMKPTLGARVGQAAVIGRAVSAAAGLE
RIDTLDPRDVAAYQPYWAVRAFLLANAGDDIAAADAYMTAIGLSDSPAVR
NFLASRLEQVRQASPG
>RHE_CH02525 probable transcriptional regulator protein, AraC family
MDFAMNRMQIKKRSLVFFMVPQFTMLPFSAAVDTLRIANRMLGYQAYTWR
LASVDGEKVYSSRGIGIEANSSLAEERRHLGGENRPGMVLVCSGIDIEEF
NNKSVNAWLRECYNRGVAVGSLCTGAHVLAQAGLLNGKRCAIHWENLPGF
SEAFPQAEVYADLYEVDGNLYTCAGGTASLDMMLNLIGEDFGESLVNRIC
EQHLTDRVRNPHDRQRLPLRARLGVQNAKVLSIIELMEGNLAEPLSLIEI
ADGAGLSRRQIERLFRQEMGRSPARYYLEIRLDRARHLLVQSSMPVVEVA
VACGFVSASHFSKCYRELYHRSPQQERAERKMTMATARQAVAA
>RHE_CH01552 probable transcriptional regulator protein, ROK family
MAMTSSIVQTPIARKISTNAVIRTVLAKGKISRADIAKLTGLSKQTISDV
VRDLEDDGWLKPVGQTDGRPGRNAIIYEINASAGLAVSIDLGGTKIAAAI
CDLLGNVVVETEVPTDPRGGPHLVNQFSDLITQLALAAGTTADKLHLVVL
GSPGVLDPATGHINVAPNIPGVDAMDLRQAFSDKMGIPVIIENDVNLAAQ
GERWRGHGVEVGNFAFVALGTGIGMGIIANGALLRGARGAAGEIAYLPLG
GDAFDPGGFTLGTFESAVGSVAMLRRYAGFGGSSASTVADLFAAFNAGET
SAIAAIEETARLVAIAIAAIGATLDPELVITGGSIGARPELVNAIRAFLP
RCTPYPPRIEISRFGNRAALMGGMGIAVERMHDDLFGVKLRDA
>RHE_CH03258 probable transcriptional regulator protein, TetR family
MRFKQFSRFSLTKPSGRYLYNLMSNAHHRKKQPALVRQQLLEVAARLAAS
DGMAAVTLDAVSSASSVSKGGLLHHFPTKNALLDALFESLLEKFDVDIEE
LMRGDPQPQGRFTRAYLRAVSGLKDRPDDSRSWTQVTIALLAEPRLRLRW
RRWVQARAEEYVGTDSSLDAQIVRFAADGLWFADTLESHEISDSLRRDLI
NRLVELTGK
>RHE_CH00344 probable transcriptional regulator protein, LysR family
MIKVEGIAAFVAVVEAGSVSEAARRLRLSKSVVSERLAELEKALGGTLLH
RTTRKLALTEDGAVFLERAGRIVREIEEAAADMAERRGTLSGPIRIAAPV
TFGRMHLGPALYPFLTAHPDIRLTLDIDDRRVDAASDGYDAIIRNGPLAD
SRLVAWKLAPSRRLLCASPDYLARQGMPRSLADLNNHRGIFYTNRGVADW
RFQTPEGAILVRAKPALGINNGDMLRDAAIAGLGIALLPAFIAGPAIREG
RLAEIDVGHRPEAEFIYMAHPAGRNPSAKLRAIADHLKKSFGDPPYWDIA
DRA
>RHE_CH00678 probable two-component response regulator protein
MIVVVDERELVKDGYTSLFGREGIPSTGFDPSEFGEWVQTAADSDIAAVE
AFLIGQGQRSFELPRAIRDRSMAPVIAVSDQPSLENTLALFDCGVDDVVR
KPVHPREILARAAAIRRRLKAIANYTDVGGIRVFSDGRDPEINGEVFALP
RRERRILEYLIANRGRRVTKTQIFNAIYGIFDEEVEENVVESHISKLRKK
LRKKLGVDPVDSKRFLGYCIDWA
>RHE_PF00052 probable RNA polymerase sigma-E factor protein (sigma-24), ECF family
MASSSSARPASHCKEKSAIEREIVELTPALRAFARRFLRSDDDIDDLVQE
TLLKALNSLHLYQPGTSLKSWLFTILRNTFCTNYRRKKREPAGMDAAMEQ
VAIAPTQEWVLREHELQRALTLLSDDRRRALTLVAAGTSYEDAAKMCGCR
IGTLKSRVSRARECLIAMLGNHLVD
>RHE_PF00332 probable transcriptional regulator protein, LysR family
MDLSSIEIFLAVASDRSVTKAAKAVGRVPSNVTTRIQQLEEDLGACLFSR
DGKKMTLTREGETFLTYANRLMALALEARRAVRPLAPSGTLRVGTMESTA
ASRLPAALTQFNRMWPDVSLHLTMGASRDLARDVLADVLDCALIARPPET
MREEDSDFDAELMALEMETVFVEDLLIVLPSGHPAINSAADLRVGSLAAL
EPGCTYRRIAENWARKSNTLPTSELGSYHAILASVATGNTAGVMPRSVLD
LMHWPTAVHTHQLGPVETLLVYRKDNCPSAFRAFHEVLGATKGREVRLAA
N
>RHE_CH00925 probable transcriptional regulator protein, LysR family
MQLPPLNALRAFEATARLMSLSKAGDELHVTHAAISHQIKHLETWLGRKL
LQKSGRGVALTPAGAEYHLAVSGSLAAIAHATGNMRRDHNMRSITVGCIP
SIASRWLVPALPSFRESDPDLDVRIVYARAEERFDDESLDVLITMGEDLS
GGRESRLLFSRRNQPVASVHYLARRNWPIENVPFAMADLLHDESMDGWRE
WFRKAEIKPAAPIRGPIFQDFNILATAVIAGHGIALCPVEVFRREIERGD
LVVLSDISTAQTQGYYLITSSSAKKPVRRFAEWFMKECQAVGLR
>RHE_CH01719 probable transcriptional regulator protein, LacI family
MTKARVTVIDIAKAAGVSKSTVSLVLQGSSLVNEATRAKVNAVMRELGYV
YNRGAANLRQAGSKSRIIGVVVNDLTNSFFAELAVGVDTVVQSAGFVQFL
SNTGESIDRQREVVASMREHGISGLIVSPARATDAADFKPLVAAGIPVVV
VVRNLPGAKVSSIVSDNRAGMISAVQHLVGLGHKRIAFLGGFPDTAVFDD
RLAGYRSGTEAAGLSYDEALVISSAPSRAGGVEAIGKAIAVGDRPTAAVC
FNDAVAFGVCDGLRARRLEPGADFAVVGFDDVIEAQAAVPALTTVSVDPQ
GIGRRGAQMLLKQINAGKAEAETVTTAVRLVVRESCGAGTASPARAGRAV
N
>RHE_CH02777 putative transcriptional regulator protein
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLS
QASLVDTTLGPSGGYRLARSPSEINFLDIVEAVEGKARSFTCTNIRENNP
CRPAGYCDSKPCAVARVMWEADEAWRNTLRAVRLSDLVGTLSEEVPADIW
QGTFQWVLQRAG
>RHE_CH03569 probable transcriptional regulator protein, LysR family
MQGITVIEDLDLLDLSQLRSFVAIEQTGSFTLAAERLGLSQSTVSQHIQR
LEAALGRKLLARDTHKVLLTGDGEALLSHARAMLSIAGQVHALFKSNSLR
GSLRLGVSEDFVTSQLPAVLEDFVRSHPSVDLELTVALSGVLYEMQDNDE
IDLVLAKRRLGDARGKLVYREPLVWLARDPERVLASGPLPLIAFPPPSVT
RAIALETLGRNGVPWRIVCTCGSLSGLTAAARAGMGVLVQPRSMAPSGLK
EIAAGKLPVLEDVEFVLVPRKGADQALVSALSDDILQKVRGLRSA
>RHE_CH01125 probable transcriptional regulator protein, LysR family
MTGREFTNIDWDDLRHFLALAQTGTLLGAAKQLGVEHATVSRRISSLEAS
LGRKLVDRRGRRISLNRDGEQVARHAALVAVHTAAIEQLGRSSTTELRGH
VRISAPPALSSVLLAQPIAAVRRDHPGVEITLVGEKRLASLNRREADIAV
RMSRPEEGDYSIVKLGETSFHLYASRTYLETVPPKDWTFIGYDETMNASP
QQLRLVELAAGRPIAVRSSVLEFQAAIANLGAGVVMLPDFVVAESSGLQR
IETEHPLTREVWLVVHSDIKDVPSIRVVIDALKKVLEE
>RHE_CH01197 probable transcriptional regulator protein, TetR family
MKDEKKRGRPRAFDAKAALGKARDVFWDRGFAAASLDNLSAATNLNRPSL
YGAFGDKEDLYLDTLEAYRQDGMDALAQALDPSLPLRDNLARVYESALAI
YLHGETAARGCLLIGTATAEAVERERVREVLGRSLSDFDGEIEKRMRLAV
ERGELPESADPQMLAKFASAVMHSLAVRARAGDSRDTLEAIARSGVDLIC
GTARS
>RHE_CH00992 probable transcriptional regulator protein, ArsR family
MKEGPDIAQIGALIGDPARANMLAALTGGRALTATELAGVGGITVQTAST
HLAKLEAGGLLTQRKQGRHRYFTLADEAAARLIESMMGFAAGRGHLRHRP
GPKEPALRKARICYDHLAGDYGVRMLDSLIASGAIDAVGDGLALTEKGEN
DLRRIGIDVGTLRSSRRPLCRSCLDWSERRAHLAGSLGKALLSSFLDKGW
ARRIAESRSIIFSPEGDRQFLTLFPVEG
>RHE_CH00278 probable transcriptional regulator protein, MarR family
MSEEKQDHVDRILAQWRRERPDLDVEPMGILGRLKRLGTHLGREVEAVLM
QHGLSTSAFDVLATLRRSGAPHRLSPGELLEMTMVSSGTMTNRIDQLEKA
GLVERIVNPQDRRSVLIALTEKGLATVEEAVGAHVANQQRLTRNLTAGDR
AEFDRLLKKFLADFE
>RHE_CH01175 probable transcriptional regulator protein, MarR family
MSNSVEIPFSTTLLVRDTCLCLHAQRAARALARLFDDALRPAGLTNGQFS
LMMSLNRPEPPPMGPVAALLAMDQTTLTAALKPLQRKGWVSVMENPKDRR
GRLLALTGEGRTVLARALPIWKDTHAALDQKLPDGSSARLRQDLQTVSGM
TGETPKPVVRRSRHNGRATGE
>RHE_CH02678 putative transcriptional regulator protein, ArsR family
MKEQNSEPAADAVASRTVSRVVPEPSALKALAHPVRLRMLGMLRLDGPAT
ATQLAVRLGLNSGATSYHLRQLAQYGFIEEAPHASRRDRWWRASHELTSV
PPTEAEGEALDLDMAFNQAALSLQVGQMQQALEEYAELPAEWRRATAADD
IIIPMTAEQAEALTKRLSDIILEAMRAAPPLGEAASGNPDMVPFYVMLHA
FPFPGRLPHREREDEP
>RHE_CH01322 putative RNA polymerase sigma factor protein (sigma-70)
MERVIEEIYRTQSRRVLATLIRLLGDFDRAEEALHDAFAAAARTWPVEGL
PGNPSAWLVSTGRFKAIDTIRRRARFDASQHHIEDSLYTVDTTEIGDMEP
IEDDMLRLIFTCCHPAIPSDAQTAMALREICGLTTEEIAHAFLVPAPTVA
QRIVRAKNRIRAANIPYEVPGRDALPQRLDQVLHVIYLVFNEGYSASSGE
DVVRADLTAEAIRLARLLLALLPHPDARGLLALMLLQDSRRLARSNEQGS
LVLLADQDRSLWDRAKIAEGLALLAEAMRAAEIGAYTVQAAIAAEHARAP
TAEETDWQRIAFYYDLLLAAQPSPIVELNRAVAIAMADGPAKGLDLIDAI
LGRQELTAYHLAHSARADFLRRLGRTEEAIAAYQTALSLCRQEPEQAFLR
KWISELAAAPERQ
>RHE_CH02554 probable transcriptional regulator protein, LysR family
MLDLNDIVIFARVVEAGSFTVAARLLAMPKTTVSRRIAALEREFGVRLLQ
RTTRSLRLTDAGRLYYEESSEALRTLEQANLRLAEARAEPAGTIRISAPV
GFGGHFLAAAIFDFLAAYPKTKVELRLTDDRLNLIENGIDLAFRTGILED
STLIARKLGSTYRILCASPGYLARCGTPGRPADLTAHDCVIAGPSAANAP
WVLEGADIRETVTVSGRFAANEMQAVMAAAIAGYGIAQLPHGVAEACIAD
GRLRRVLDGYTTPAGGLHVVYPSSQHLSPLVKAFIDLAATRLNARDGAND
NLAVILR
>RHE_CH02754 putative transcriptional regulator protein, DeoR family
MSQNRNASSAPVALPDEQMQVRVVWLYYMEGRTQGEIAEALSTNRLRVNK
IIAEARRSGLVTITLNSRLTSCVALEQQLAAEFNLNRAIIVPTPEDAELI
PVLLGQAAADYLVQLLNGGNIRGVGVGWGATLREMVRHMPSLRRPDICVN
SVMGGLTHGIEINTFDIASDLARQLNAECSYLAAPIYAGSPESRTAIVRQ
DVFESAFRQIEANDIIVLSIGDMTERSLLMRYGLPRNINIEELLAAGACG
DVLGQFVDKIGRPIDHAINRCAIAPELEALRVIPNVVFASGGLNKAQAIA
AVLLSGLGNILISDEDTARQAQKLAVELRTSGGF
>RHE_PF00563 putative transcriptional regulator protein
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLT
RTELGRHSGLTGPGITNILRRLAEEKLVTSNRRNGLGGGATATEFALRPE
GAFSIGVKLRRTRGEIVLIDLSGQVHDRVYFGVEPEDGVGAVHAAVRDII
DRHATLPIVGLGIAANDWSDARSEQLAAMATIPRIYVENECTASLLAERT
IGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSIGEMLTGPDSV
QLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPII
AMAGFIAPSVVMIGGDLPQGVIEALIHQLSVERRDTSTRPLLTPWISPMR
PASFSGGVALGAALLPFLNTLLLPPASA
>RHE_CH03845 putative transcriptional regulator protein, LacI family
MGAETRERVKRIAGEIGYRPNALARGLLSKRSFTIGLLTNDTYGRFTLPV
MAGISDALVDHGVSVFLCAIEDDPALAQIHVDAMLDKQVDGIIATGKRLD
RRLPVDLSNLHVPVVYAFTEGTQNSVTFRSDDEQGARLAVEWLTKIGRRR
IAHVTGPEDFFSVRERAGAYHQVAGHCEPVLYGVWSESWGHEAIERLWKR
SGEKPDAIFCGNDQIARGAVDALRERGIKVPQDVSVIGFDNWEIVAAQTR
PPLTTVDMELKELGRQAGLTVLALAEGRPVEPGVRKLPCRLVVRQSCGGK
APE
>RHE_PF00305 putative transcriptional regulator protein, LacI family
MTTIRDVARLAGVSISTVSLALNSPKRVGAETLDRIQQAIKSTGYRIDPV
AQTLARGRSSLVGFVSANLGNMFFGDIRREIEHQALDHGYFVLIADSSGR
ADLERALLERMEAQKIAGIALATNGHGEEYAAFLRDFKTPIVMFDQKVEG
AERDFVGSDNPLTTTILTEHLLQLGHRRIAFISGPSGLHTADERLKGFID
TMAAAGVDVDPSLVTEGGYTRTGGHTQAMRLLTLRDRPTAIIGANNMMGL
ATLQVMQEMGFRCPEDVSLAMVDDVPWSNVITPRITMVVQDAQKLGELAA
QRLLARISSPEAAAEPPRDFILTPRFVRGESTKRL
>RHE_CH02910 probable transcriptional regulator protein, GntR family
MKSAAKAMQAEEVAETGAHQIRDAIREAIVERRLSPGTKLSESDVGNLFN
VSRTLARAALQALSYEGLVSVEKNRGAFVAYPSPDEARQIFSARRLVEPG
ILREAAARITADDIRNLRELLQEEGRLMSERGQTARRAEIKASGDFHLML
AELSGNAIMQRFMEELVARSSLVIALYGQSTASSCGHSEHGDIISAIEGN
ELDRACQLMLYHIAHIEADLDLRERKSLGLKEAFEL
>RHE_CH03767 putative acetyltransferase protein
MATIGADRPLVQASISSKNLPLVRRLEAVGFRAWPAASVQYDGSWQVRLT
AGHPSNRLNSIVPLDPSDHRDVEIRLEKASRKFEAYGRAAVVRQTPLASP
VLIELLSARNWTRFDETVVMTCDLAEAELPDTLDHLPTHDVGRFVDANLA
VDRGPLSLKPALAEIISAIKPPSGLFMIENAVEGPLATVLCVQDNDLAGI
MSLSVCETRRREGLGTEILTSALRWARMRSARSAWLQVRLSNRPAIALYE
RLGFRDAYHYCYWQREAR
>RHE_CH02976 probable transcriptional regulator protein, LysR family
MPLDWDKLRIFHAAAEAGSFTHAADKLHLSQSAISRQVSALEQDVGTKLF
HRHARGLILTEQGELLYRTAHDVLLKLETVKMQLTETTETPSGKLRVTTT
VGLGQGWLTDKIQEFLQLYPDVQIQLILDNEEVDVNMRHADCAIRLRQPQ
QSDLIQRKLFTVHMHVYAAPSYINRHGEPQKIEDLDNHRIITFGEPAPSY
LLDVNWLEVAGRSSDNKRIPHLQINSQTSIKRACLLGIGVACLPDYIVGR
DPGLIQLAINADVPSFDTYFCYPDEIKNAAKLKAFRDFIVSKARNWNF
>RHE_CH03286 probable transcriptional regulator protein, LysR family
MPLPCGLHLSAPSRLRSSRYIVENLSAVAILNRQNGAIMETNMEQLKGIS
IFVQTAEAGGFSAAAERLHLTRSAVSKTIARLEQRLGVRLFNRTTRSQSL
TEEGRFFYERCLRAIEEIRIGEAQLESGRRAVRGRLRVSMPVLFGRHCAA
PILTRLLDDHPDLELDFSFSDRVVDLLEDGFDLAVRNGPLKDNPDLMARA
IARQSMTVCASPTYLEKYGVPQTFDELAHHQGIIYRRGDNDRAWIFPSAV
GPPREVLPKSRLRLDDLASIADAAVEGRGLAWLTCWLVRDRVLSGELVRV
LTDVPSNIFEAYAVWPRSPVMLPKVRLAIDILAANLPRLMD
>RHE_CH00713 putative transcriptional regulator protein
MAERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQ
LLLKLAAVYRVDLEELRGQTGGSLGQLKEVFADPLLAGELPGDQELVEVA
EAAPNAAAGMIKLYRAYREQAARLSDLTALMAAEGHTPIAASRLPLDELR
ETLERRPAYFGRIETAAEAFAATLPGGVDLAAGLKDWLRAERGIAVRVLP
VHVMPDLRRRFDRHSMRLFISERLSPADRAHEIAIETANLALLPAIDAEL
DDLSLSSAEARRIARFELARIAALALAMPYEAFLAAAKATRYDIDILRAR
FGVSFGHAATRLTMLQRPGAAAIPFFMMEIDAAGYRLRRGGAQGFPQARF
GGGCPKLNIHAAFLQPGQILAETVIMPDGASFLTVARTLEGPSVEFGERV
RRTAMLIGCDAALSDGLAYGQMTAVDPVTIGPACRLCERRGCLSRAEAPV
TRPLGLDEMVAGLSAFDFQ
>RHE_CH00055 actR, two-component response regulator protein
MTEQNQGNFAASDEDHIGPDASLLIVDDDGPFLRRLARAMETRGFQVETA
ESVAEGVAKSKGRPPKYAVVDLRLGDGNGLDVIEAIRQRRDDTRIIVLTG
YGNIATAVTAVKLGAVDYLAKPADADDVFSALTQRPGEKAELPENPMSAD
RVRWEHIQRVYEMCERNVSETARRLNMHRRTLQRILAKRAPK
>RHE_CH00695 aglR, transcriptional regulator protein, LacI family
MNLKQLSELLGLSQTTVSRALNGYPEVNEATRERVLQAVKETGYRPNKAA
QRLATGKAGSIGLVMPTAPGHQSDVHFGEFLAGLGEEAVRHDFHFVIMPS
DPDDEVAALRRLAISGNVDALFIAYMRGHDPRLAMLKSLSMPYVVHGRSF
GAELDYPYLDIDNEGAFYDATRLLLQLGHTRFALMNGPMHLDFAIRRRNG
VISALAERGLTLEEDCMSHALMTDEQGLLAMERFLQLPERPTAILCSSTV
MALGAIRAVNQAGLRLGEDVSLIAHDDVLPLLKPENFSVPLTTTRSSLRA
AGVRIAQRLIGTVKQAGPFPEQELWKTELIVRASTGPAPQQS
>RHE_CH01769 aldR, leucine-responsive transcriptional regulator protein, AsnC family
MADLDTIDLSILKVLQVNARITNAELAERIGLSPSACSRRLDILERSGVI
DGYHARLSHKALDYKMIAIVHISLSGQFAKTLAEFESAVKLCPNVLVCYL
MSGEYDYILRVAARDLEDYERIHRDWLSALPHVVKINSSFALREIIDRPN
VGL
>RHE_CH03193 ampR, transcriptional regulator protein (activator), LysR family
MVRQFLPLNGLRAFEASARHLSFTRAAIELCVTQAAVSQQVKGLEKRLGV
ALFQRLPRGLKITAEGEALLPTVTASFDQMATTLDRIEAGQVRELMFLGV
VGTFAVGWLLPRLADFQQRHPFIDLRISTNNNRVDPAAEGLDFAIRFGSG
SWHRTDAQRLFEAPLSPLCIPKLADDLRSPADLAGVTLLRSYRTDEWSTW
FAAAGVPAAPQVNAGIVFDSSVGMMDAALQGFGVALAPPSMFSRHLCSGA
IVQPFATAISLGSYWLTRLQSRPVTPAMRAFSDWIFSEVERSAQLSGRSD
>RHE_CH01138 betI, transcriptional regulator protein, TetR family
MEPVRRKALVDAALRVIGDHGSLAVTMSDIARRAGVSPALAHHYFGSKEQ
LLIETIRSLLRQLRRDTVAALKAARTPRERLSAVIRVSFHADQFAADTIA
AWLAFYAEAQRSEETRRFLVIYARRLRSNLLADLKALLPADAAERIAEGA
AAMIDGLYIRQSLKSAPIGIEASIALTEDYLNALLAATSPSPRGERDDHI
EHPKDK
>RHE_PF00169 casR, calsymin transcriptional regulator, TetR family
MDIADETADEPRKRGRPKVSSDEDKRTHIVEVARRVFVKYGYAGSTTAVV
ASEAGVSKQTLYKLFQSKEELFAAVVGAHRRLMLDLPRPAEDIPIAESLE
RIFMLDMDEDTDAERAGFLQLVFREAAQFPELIDILQREGILASRQHLAD
WLSDRRAEGRLSLDDPDSGARMLMDMIFGGMGPPEGRVQAWPDRALMLAH
LHRCIAIFAAGVRAA
>RHE_CH00036 chvI, two-component response regulator protein
MTETNTMPTIALVDDDRNILTSVSIALEAEGYKVETYTDGASALDGLLAR
PPQLAIFDIKMPRMDGMELLRRLRQKSDIPVIFLTSKDEEIDELFGLKMG
ADDFITKPFSQRLLVERVRAVLRRASSREAAAAGGTSPGGAPKAGAVQQA
RSLERGQLVMDQERHTCTWKGEAVTLTVTEFLILHSLAQRPGVVKSRDAL
MDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDTDFDMIETLYGVGYRFREA
A
>RHE_CH02915 cinRch, autoinducer transcriptional regulator protein
MPCIYDGPHGRIEGTGTMEMIENSYSDKFEPAFEQIKAATNVDAAIRILQ
AEYGLDFVTYHLAQTIASKIDSPFVRTTYPDAWVSRYLLNSYVKVDPIVK
QGFERQLPFDWSEVEPTPEAYAMLVDAQKHGIGGNGYSIPVADKAQRRAL
LSLNARIPADEWSELVRRCRNEWIEIAHLIHRKAVYELHGENDPVPTLSP
REIECLHWTALGKDYKDISVILGISEHTTRDYLKTARFKLGCATISAAAS
RAVQLRIINP
>RHE_PF00046 cscR, sucrose operon repressor, transcriptional regulator protein, LacI family
MRQGWMPLVGLVADDLITSPFATEIIRGLDGAVRAADMAVFAMTLGGHRS
IASILDEMRRFRPRAIAYAAMYHKSVDLPPEFADAVGVMINCRDANDRVT
SLVPDESGAAIEITNYLIDAGRRNIAFINLPGLLAGELRELGFRQALEHA
GIDGAGAIVLPAVSKAIYSDRAHSLVSAHVQELMIGPRRPDAILCGNDRV
AMEVYAALRRAGAAIPDDVAVASFDNQVEIASRLDPPLTTMALPHRAMGR
QAAQILLAEDRAPVGVQKLPFQLVERASV
>RHE_CH00560 cspA1, cold shock protein
MNTGTVKWFNATKGFGFIQPDDGAADVFVHISAVERAGMRDLKDGQKLSY
DLVRDNKSGKMSADRLQAA
>RHE_CH01169 cspA2, cold shock protein
MNSGVVKWFNGTKGFGFIQPDDGSTDVFVHISAVERAGMRELTEGQKVRY
DLVRDKRSGKNSADNLQAA
>RHE_CH01885 cspA3, cold shock protein
MADRISSNAYADVDELSSEAVDLVEITGVVKWFDVAKGFGFIVPDNGMQD
VLLHVTCLRRDGYQTILEGTRIVALVQRRERGYQAFKILSMDQSTAIHPS
QLPPVRTHVQVTATSGLERALVKWFNRTKGFGFLTRGEGTEDIFVHMETL
RRFGLTELRPGQVVLVRFGDGEKGLMAAEIHPDVPSPASRSH
>RHE_CH02568 cspA4, cold shock protein
MATKGTVKFFNQDKGFGFITPDGGAKDVFVHISALQASGIQSLREGQQVT
FDTEPDRMGKGPKAVNISAA
>RHE_CH03005 cspA5, cold shock protein
MAETGTVKFFNTDKGFGFIKPDRGGADIFVHISAVQASGLAGLTENQKVS
FDTEPDRRGKGPKAVNLQIAG
>RHE_CH03334 ctrA, two-component response regulator protein controls chromosomal replication initiation
MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDYDIILL
DLNLPDMSGYEVLRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMT
KPFHKDELVARIHAIVRRSKGHAQSVIMTGELIVNLDAKTVEVGGQRVHL
TGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKK
LANAAGGANYIETVWGRGYVLREPDGTEYAETA
>RHE_PF00438 dadR, alanine catabolic operon transcriptional regulator protein, AsnC family
MPALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVI
RGYTALVDTGNADDMIAVIINITLERQTEDHLDRFEAAVRRHPEIRECFL
MTGGSDYLLRVEVASAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRT
RGRR
>RHE_CH02179 deaD, ATP-dependent RNA helicase protein
MTEFNGVVPAIAKALQKRGYAELTPVQQAMLDPALAASDALVSAQTGSGK
TVAFGLALAPTLLDGHERFGNAGAPLALVIAPTRELALQVKRELEWLYEM
TGAVIASCVGGMDIRSERRALERGAHIVVGTPGRLCDHIRRRALDMSDLK
AAVLDEADEMLDLGFREDLEFILDSAPDERRTLMFSATVPAAIAKLAKSY
QRDAVRISTAAEEKQHVDIEYRALMVAPSDRENAIINVLRYYEATNAIVF
CSTRAAVNHLTARFNNRNFSVVALSGELTQNERSHALQAMRDGRARVCIA
TDVAARGIDLPGLDLVIHADLPTNPETLLHRSGRTGRAGRKGISAMIVPL
NARRKAERLLENAGISAAWARPPSAEEVNERDDERLLADPIFHDAPQEEE
QGLVQQLLSSHGAEKLAAAFLRLYRTNHSAPEDLIEVTVQDGGSRKRRDN
AESYEPAQKGPREDFGPSVWFSVSVGRKQNAEPRWLIPMLCRNGNVTKRE
IGAIKMQPEETYVEIAVASADGFQEALGPNKTLERGIRVTRLSGTPDFSR
AAAPKPYAGKSSRDERPGEAFRDERPKKKFGKGSGGGYAATDNAGQERRD
SKPWSKKPGKPGFDGPQSDKPRYDKPKFEGGKFEGKGGAGPKNKFSKKKP
G
>RHE_CH02128 drrA, two-component response regulator protein
MHLVLVDHNLPRTSGRAFAQKLRSEANIGIVMVTAAGSAADRVLGLETAA
DDYVVKPFEPIELTARIKAVLRRTVPSLKQEKESEREHERPSLLLGDWAI
DLMGRQAVCLADRSKTLTTAEFALLEILAQTPNQPVSRAQILDRLGSESD
RYIDRNVDVLVLRLRRKIERNPDIPRHIKTRRGKGYVLHTGDGEPST
>RHE_CH01286 feuP, two-component response regulator protein
MRILVIEDDVNLNRQLTDTLKEAGYVVDQAFDGEEGHFLGDTEPYDAIIL
DIGLPEMDGVTVLEKWRGAGRGMPVLILTARDRWSDKVAGIDAGADDYVT
KPFHVEEVLARIRALIRRAAGHASSEIICGPVRLDTKSSKATVNGAALKL
TSHEYRLLAYLMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKK
MGVDLIETVRGLGYRIQAPKHAN
>RHE_CH00464 frcR, sugar transcriptional regulator protein, ROK family
MSSLDGPAHAPVPPPILNPAGGANQVRVRAYNERLVLSLVRLYGALSKAD
IARRSGLSAQTVSVIMRVLEKEGLLSRGAPVRGRVGQPSIPMHLNPDAVY
SFGLKIGRRSADLVLMDFVGRIRMQLHQTYAYPLPDEILAFVTSGIEEIE
SRLDDKQRSRIAGLGIAAPFELWNWAEEVGAPPGAMEVWREVDLQADIAA
RVSHPVFLQNDATSACGAELVFGVGPSYPDFVYFFIGSFIGGGIVLNSAI
FSGRTGTAGAIGPLPVRDRNGETKQLLEIASIFVLENMLRERGIDPEPLW
YSADDWVDFGEPMEVWIQDSAKALAQAIVAAASIVDFSAAVIDGGFPDWV
RSRMVQATIDEAAKLDLQGVVMPEIIEGAVGAQARAIGGASLPIFSRYLT
DQNVLFKEIDHAEGT
>RHE_CH03166 gbpR, transcriptional regulator protein, LysR family (possibly activator of the expression of chvE protein)
MTIVSEPVLMDHVDIHSDNFGDDSFLRSGLKLNHLRIIVAIEDSGQISAA
AEVLNISQPAASRMLSEMEAITKTSLYERVARGVVLTTFGAALARRARKI
LLELREASREIGELKSGKGGSVFIGAVTAPAMSLVVPAINRVRKAYPGIE
INIQVETSNVLARELLAARHDFIIGRIPDDLNPRLFEVKEIGIERACLIV
RNRHPLLKRKKTSSLSDVRDYDWVFQPPGTLLRRTIEDIFLSRGVALPEN
IVNTSSLLLTCAIVCETDAIAPVAVDVAHFLASQGAKASDVRMLPIDFDI
NVKPYSLITARERALPPSAKLLYDIILEESRTQGG
>RHE_CH01786 gntR, transcriptional regulator protein, LacI family
MRRITLDDVANLAGVSPITVSRVLRKPDVVSPALRLRVDAAVKELGYVPN
LAASRLASSRTHAIGVIVPTLYNVIFAEYLFALHDVLVAAGFQVIVVNSR
YSEIEEENAIKALLGQRVEAIIITGTHHTPLSRQLLTQAHLPVVETFELS
PDPIDLNIGMSQEQAGQTATRHLIERGFRRIAFLTGNLDHRAQSRFEGYR
VAMQQADLPNLPIVAERPRHSSVALGSDLFAITCAHGDVPEAIFCTDDNL
ALGAMQECRKRGIRVPDDIAIMGFHDLEFAACAAPSLSSVVTRRFETGKL
AAEKVLAALASSARSKSEQIDLGYALIPRESTAV
>RHE_CH02969 greA, transcription elongation factor (transcript cleavage factor) protein
MVEKVPMTQGGFVKLQEELRWRQQEERPRIIEAIAEARAHGDLSENAEYH
AAKEAQSHNEGRITELEDLTARAEVIDLTKMSGDKIKFGAKVKLVDEDTE
EEKTYQIVGDQEADVKAGRISISSPIARALIGKEVGDSIEVNAPGGSKAY
EILQVSWG
>RHE_CH02501 greB, transcription elongation factor protein
MAVAFTKEESFETASETLLPDRPISPHPNLVTEAGLRALELQFQQARAAY
DTAIAIEDVNERRRQAANPLRDLRYLSARLRTAQLIPDPTSADVVAFGLT
VTFTRDDGRVQTYRLVGEDEADPKAGSISYVSPVAQLLMGKAVGDVVETG
GQELEIIAIS
>RHE_CH01277 gstR, transcriptional regulator protein, LysR family
MDRLEAMTVLLTVVEQGSLSAASRHLHSPLATVSRKVSELEAHLGARLLQ
RTNRKVALTEAGRAYVEAAREILDRVEEAERTAAGEYSAPKGELTMTAPI
VFGRLHVLPVAVDFLKAYPDINLRLMLGDRLANLVEDHIDLALRIGNLAD
INLIATRLGLIRRTVYASPDYLALHAAIRHPSDLSAHDCITFEGMASTRS
WTFVEGKRELVVPIRSRLAVNTAEAAVDATVAGLGITRVLSYQAAGAEKA
GLLVPLLADFEQQPAPVHLVYPSQGLVPLKMRALIDFATPRLRAALK
>RHE_CH00364 hrcA, heat-inducible transcriptional regulator (repressor) protein
MGSKRFMGIRSTSVSDAVAALDERSREIFRRIVEGYLESGEPLGSRNLSR
LLPMSLSPASVRNVMSDLEELGLIYSPHVSAGRLPTQIGLRFFVDAFMQI
GDLSAEDRANIDRQVRAESGGNPVESMMNEASRMLSGISRGAGLVITSKS
DPVLKHVEFIRLEPTKALAVLVGDHDQVENRIIELPAGVTSSQLTEAANF
LNAHMSGQTLPELRKQLSRLKDDVRHELDALSRDLVERGIAVWAGSPDEG
KPAQLIIRGRANLLEGLAGAEDLDRLRMLFDDLEKKDSLIEILNLAETGS
GVRIFIGSENKLFSLSGSSLIVAPYRDDDDRIVGAVGVIGPTRLNYSRIV
PMVDYTAQLVSRLSRNPL
>RHE_CH01928 lexA, transcriptional regulator repressor LexA protein
MKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNRARALEV
IKLPEAYNPSLQPRRGFSPSVIEGSLGKPQPVAAPAAPKPVADNGNSISV
PVMGRIAAGVPISAIQNNTHDIVVPADMLGSGEHYALEVKGDSMIDAGIF
DGDTVIIRNGSTASPGDIVVALVDDEEATLKRFRRKGASIALEAANPAYE
TRIFGPDRVKVQGKLVGLIRRYH
>RHE_CH02974 lrp, leucine-responsive transcriptional regulator protein, AsnC family
MNVQCYYSRAALHYQQGKWPCCARIRHRLETFLRIPLLYIEARRGELKKG
HGVGRTELDVIDIKILRELQADGRMTNVELADRVGISAPPCLRRVRKLEE
AGIIEGYHAMLNSPKLGFDLVAFCMVGLKHQSEGNLKAFAAATAEWPLVR
QAWMVSGDSDFLLHCVAENLTHFQDFVIEVLTANEHVDTVRTMLTIRQVK
KLGLVEV
>RHE_CH00919 matR, transcriptional regulator (activator) protein, AsnC/GntR family
MSENVGRWLRDEIENAILSYEFAPGERLDETVLANRFGVSRTPVREALMQ
LDAIGLIEIRPRRGAVVIDPGPHRIYEMFEVMAELEGLAGSLAARRLDKV
SREAITATHSRCEQSAAAGDSDAYYYDNEEFHKAIYAASRSDFLQEQCAQ
LHRRLRPYRRLQLRVRNRLSTSFSEHCAIVDAIFAGDGDEARRLLRTHVG
IQGERFSDLVASMAAR
>RHE_CH02095 mfd, transcription-repair coupling factor (TRCF) protein
MIPGFDAKKLAAVAEPLTIGNVPTGLEPLLLAELARAGEPVAYVMSDGHR
MADLEQMLGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALGGLIA
HRKKPHAAIVLVTANAMLQKVAPHDVIESLSFSARPGNQLRMDDLAGRLE
RNGFDRVATVREVGEYAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFD
PASQRTTGQVRSLDLNPMSEVTLTPDTISRFRKNYLSAFGATTRDDALYL
AVSEGRRYPGMEHWLPLFYEKLDTVFDYLSGFRVVTDHTVREAAEERSKL
VLDYYDARLNSGQPAKGQMAQGTPYKPVTPGQLYLDSKHFTKTLDALGAI
RISPFNEHEGEARRVINVDARQGQRWARSNAEGGGDAERVNIFDIVVKHI
ADRRAAGAKVLVTAWTEGSLERLLQVLNEHGLEKVKPVEALKDIRSLEKG
EAAAAVLNLESGFEAGELVVIGEQDILGDRMVRRSKRRKRAADFISEVAG
LDEGSIVVHAEHGIGRFIGLKTIEAAGAPHACLELQYADEAKLFLPVENI
DLLSRYGGEGTDAQLDKLGGGAWQMRKAKLKKRLLDMADALIRIAAERLT
RHAPVLTTPDGLYDEFAARFPYDETEDQDNAIEAVRSDLGAGRPMDRLVC
GDVGFGKTEVALRAAFVAAMNGVQVAVVVPTTLLARQHFKTFSERFRGLP
VRVQQASRLVGAKDLALTKKEVADGKTDIVVGTHALLGAGIKFANLGLLI
IDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLIT
TPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLADVHA
FLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDV
PTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTATAE
RRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQ
MLEEAVAEVKGVDEIHDTGWSPQISVGTTVMIPENYVPDLHLRMALYRRL
GEITDLKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRTANVEKLDA
GPKGVVVQFRNKEFPNPANLVGYIGKQGTMAKIRPDHSLFLTRDLPTPEK
RLQGAAVIMTQLAEMAK
>RHE_CH04022 mgpS, ATP-dependent DNA helicase protein
MILSGRGVTAVLGPTNTGKTHYAIERMVAHGTGVIGLPLRLLAREVYTRV
VEKVGLQNVALVTGEEKISPPDARFSVCTVEAMPRETKAAFVAIDEVQLA
GDLERGHIFTDRILHLRGRDETLLLGAATMRPILQQILPGITIVERPRLS
HLLYAGQKKITRLPQRSAIVAFSADEVYAIAELIRRQRGGAAVVLGALSP
RTRNAQVALYQAGDVEYMVATDAIGMGLNLDVDHVAFAQDRKFDGYQFRN
LNPAELGQIAGRAGRHVRDGTFGVTGQVSPFDEELVQRIEGHEFDNVKVL
QWRTTAMDFSSIQSLRASLEAGPRVPGLTRALPAVDQQALEQLSRYPEVI
DLADRPARVEKLWEACALPDYRRITPAQHADLISTLFSDLVRYGTVNEQF
LAEQVHRSDRTDGEIDTLSARIAQIRTWTYVSNRPGWLADPTHWQEKTRE
IEDRLSDALHERLTKRFVDRRTSVLMKRLRENAMLEAEISVNGDVFVEGH
HVGQLSGFRFTPVAGTDGPDAKAVQAASQKALALEFEARAARLHAAGNSD
LAIGSDGLIRWLGDPVARLSGSDHIMRPRVILLADEQLTGNARDHVAARI
ERFVNHHVSTVLKPLDDLSRAEDLQGLAKGLAFQLVENLGVLFRRDVTEE
VKSLDQEARASMRRYGVRFGAYHIFVPALLKPAPAELITLLWALKNDGLD
KQGYGDLIPVLAAGRTSVVTDPSFERMFYKLAGFRFLGKRAVRIDILERL
ADIIRPLLQWKPGQNNRPEGAYDGRRFTTTTAMLSILGATLEDMEEILKG
LGYRADAVKAEEASTHLAAQDAASAPAASAETSGEEAAEKADHDDADGAT
EEAASEPSAEPASTAADVPATEANDSNVAAEVTDAAASAEAVVSGEAGEP
AEPKPVLLWRLGGRNDNHRQARGGHGERRGGQNQERGERNRRPNGGEGGE
GNRGGDGRDNRHGRGKDGGSREGGRPQQARGERKDQPRGDRQDRGDRKDR
GERNDRNDRNDRNNNRGAQPLRFEAKPPRKEKPIDPDSPFAKLAALKEQM
KK
>RHE_CH03089 nolRch, transcriptional regulator protein (repressor of nodulation genes), ArsR family
METPNLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQ
SALSQHLSKLRAQKLVKTRRDAQTIYYSSTSESVMKILATLEDIYLVPSR
NRSAA
>RHE_PF00226 nolRf, transcriptional regulator protein (repressor of nodulation genes), ArsR family
MNNQSSVAPSPKTNAFDNEANFLSAMGNSKRLHILHLLTEGEMSVTVLAD
EVGLSQSSTSQHLAILREQELVQTRRAAQTIYYSLQSDGVRAMLDTLADI
FGSHRRTAAEPTRAVGT
>RHE_CH00118 nusA, N-utilization substance protein A
MAVSANRLELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGTESNI
RADINPKTGEIRLQRLLEVVDKAEDYSTQIPLELARDRNPDAALGDFIAD
PLPPMDFGRIAAQSAKQVIVQKVREAERDRQFDEFKDRVGEIVNGTVKRV
EYGNVIVDLGRGEGIIRRDEMIPRENVRYGDRVRAYVYDVRREQRGPQIF
LSRTHPQFMVKLFTMEVPEIYDGIIQVKSVARDPGSRAKIAVISNDSSID
PVGACVGMRGSRVQAVVGELQGEKIDIIPWSQDPATFVVNALQPAEVAKV
VLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDIMTEAEESE
RRQKEFNERTNLFMDSLDVDEMVGQVLASEGFAAVEELAYVDLDEIASID
GFDEDTAQEIQTRAREYLEKLEAEMDEKRKALGVKDELRQIDGMTAQMMV
ALGEDGIKTIEDFAGCAADDLVGWTERKNGETKKFEGLFSKFDLSRVEAE
QMIVQARLAAGWITEEDLAKGTEEEVTEAEQEA
>RHE_CH01526 nusB, transcription antitermination protein B
MNDDKTERPVKTANQRGAARLAAVQALYQMDVGGTGVLEIVAEYEAHRLG
QEIDGATYLKADAGWFRSIVSGVVRDQVRLDPLIAVALQDDWALSRLDST
VRAILRAGVFELLDRKDVPVAVIVTEYVEIARAFFDDDEPKLVNAVLDRI
AKQVRGEAKK
>RHE_CH01662 nusG, transcription antitermination protein
MAARWYIVHAYSNFEKKVAEDIENKARQKGLEHLFEKILVPTEKVVEVRR
GRKVDSERKFFPGYVLVRANLTDEAYHLIKNTPKVTGFLGSDNKPVPIPD
YEAERILGQVQEGVERPKASVTFEIGEQVRVSDGPFASFNGTVQDVDEER
SRLKVEVSIFGRATPVELEYAQVEKV
>RHE_PF00003 oxyR, hydrogen peroxide sensing transcriptional regulator protein, LysR family
MKNLTLKQLRYFEALARDGRFRRAADACAISQPALSMQIKELEQELGSEL
FERSAREVKLTPFGQTFALRVRDILRAVDELGEFARASRDSFLTRLRIGI
IPTIAPYLLPTVINDLNKSFAGIQIEVRETQTGKLVHELAQGQLDMAIVA
LPVSEPSLTELELFREEFVLVRPHEDGDKPVPEREALREMRLLLLEEGHC
FRDQALSFCKVGAARPREIMEGSSLSTLVQMVGAGIGVTLIPEMAVPVET
RSAHVSISRFPSPQPSRTIGMVWRNSTPMAKQLQEVGEAVRRSAETMRQQ
YGGG
>RHE_CH04119 parB, chromosome partitioning protein B
MNDDVSKRRLGRGLAALIGEMDQPIPVEAERTVSADRMIPIEFVSRNPRN
PRRFFDDTELHDLASSIRQHGIVQPIVVRTMSQDRYEIIAGERRWRAAQL
AGLIEIPVIIRDVDDKTALEIAIVENVQRADLNPLEEALGYEQLIAEYGY
TQNDLGEIIGKSRSHVANSLRLLKLPEPVRDLLAAGSLSAGHARALVSTS
DPASLARTIVAKGMSVRDAEKLAQNNIRAQSEPQQPVLRRDQKDSDTLAL
ERTLSDALGLEVAINHRNGGGQIKIAYKSLEQLEEICRLLERR
>RHE_CH00514 phoB, phosphate regulon, two-component response regulator protein
MIPRVAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQERTPDLL
ILDWMLPGVSGIELCRRLRMRPETERLPIIMLTARGEESERVRGLSTGAD
DYVVKPFSTPELVARVKAMLRRARPEVLSSVLKCGDIELDRETHRVHRKS
REVRLGPTEFRLLEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVG
RLRKALNFSNMQDVIRTVRGAGYSMEA
>RHE_CH03443 pobR, transcriptional regulator protein, AraC family
MSRHIPTYELYGENTGRSPEFWLHCETIRSRSSLHHWEIRLHRHESFFQI
LYIEAGSGDAIFGKRSHAIRPPAVITVPPGLDHGFRFSRDIDGLVITILR
SHLSHPPGERSHLGEWLAMPRLTPLDPDNAEAAYVMQTLRRLGDEFENRR
GGRNEVLAAYVGLALRLTARISHEGHAQELPSNENERRMVMLDELIQQHF
RSHRPASFYAKELGVSSTHLTRIVRSMTGNTPHELIAGKLIEEAKRQLVF
TIGSVQEIGFRLGFADPAYFSRFFLKYTGETPRIWRTNEKARLERA
>RHE_PF00385 putR, proline dehydrogenase protein
MATEPDVFSELDQFDRKILAALAEDGRLSITDLAARVGLSKTPCQIRFKR
LISDGYIEGFKAVLNPAKMQLDHIAFVEVKLSDTREAALKSFNDAIKKIR
EVEECHMIAGRFDYLLKIRTRDIGRYRRVLGERISTLPHVANTSTNVAME
TIKEGWDKFGSGLS
>RHE_CH01294 ragA, two-component response regulator protein
MIAMSAAPQPDALSLAETQPVGNVGRMKILIIEDDLEAAAYLTKAFREAG
IVADHASDGEAGLFMGSENTYDVIVIDRMLPRRDGLSVISELRRKGIHTP
VLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEVLGRRKGTPEQ
DVVYRVADLELDRLSHEVRRGGKEIPLQPREFRLLEYLMKNAGQVVTRTM
LLENVWDYHFDPQTNVIDVHVSRLRSKIEKDFSQPLLKTIRGAGYMIKDE
G
>RHE_PF00439 raiR, transcriptional regulator (activator) protein, LuxR family
MLSSSRFFYCLDRISASPTLQDLETALDEVRHIYAISHMVLHVTRSSGAT
VSNPLLMLTYPPEWVKQYRDRDYFSIDPVVRLGRRGFLPVEWSASKWDSG
RAYGFFKEAMAFGVGRQGVTLPVRGPQGERSLFTVTSNHPDAYWRQFRMD
CMRDLQFLAHHLHDRAMVLAGMREIADVAHLSRRELQCLEMTASGFLAKQ
ISARLCISISAVQLYLASARRKLTVATTSEAVAKATALELI
>RHE_CH02093 recG, ATP-dependent DNA helicase protein
MRPAILDPLFSPISGLPGVGPKIAELLVKLFGRETVEDCRVIDLLFHAPF
SLIDRRNQPGIGLAPQGAIVTITARVDRHLVPPRGKSNVPYRVFLHDETG
ELTLVFFRGQAAWLEKQLPVDAEVTVSGKVDWFNGRASMVHPDYIVKAEE
VESLPLVEPIYPLTAGLSPKTLRKIIDAALPRFPEMPEWIDLTLTQKQGL
PSIRDSFHMLHEPRDPSDVDPQAPARRRLAYDEFLAGQLSLSLVRQRLHK
VAGQPVHATGAVSSKIVKALPFSLTSSQNDAIAEILKDMAGAERMLRLLQ
GDVGSGKTLVALMAMAAVIESGGQAVLMAPTEILARQHHATISKFAASAG
LGIEVLTGRTKGREREEILERIASGAAQIIIGTHALFQDSVTYDKLMLAV
VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLT
EKPVGRKPIQTITVPMERTGEIVGRLQSALAEGKKAYWICPLVEESEELD
LMSAEERHATLVAALGSDIGLIHGRMSGPEKDAAMVAFKNGETRLLVATT
VVEVGVDVPDATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGP
LGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRIASL
EAHADLLEIARKDAAYLIERDPELTSERGQAIRTLLYLFRRDEAIRFLRA
G
>RHE_CH01385 relA, guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
MMRQYELVERVQQYKPDANEALLNKAYVYAMQKHGQQKRASGDPYISHPL
EVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGL
TKIKKLDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHM
SADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPEAYETVTK
RLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQS
KSLSFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPK
QNDYRSLHTTIVGPSSQRIELQIRTKRMHEIAEFGIAAHTLYKDGATNAD
GDILSRESNAYSWLRHTIEALAEGDSPEEFLEHTKLELFQDQVFCFTPKG
KLIALPRGATPIDFAYAVHTNIGDTTVGAKINGRIMPLVTRLANGDEVEI
IRSGVQVPPAAWEEIVVTGKARAAIRRATRMAIRKQYAGLGHRILERTFN
RAGKIFSREAMKPALHRLGQKDVEDAIAAVGRGEMSSLDVLRAVYPDHQD
ERVTVKPSGDDGWFNVRSAAGMIFKIPGKAKAGAEGAHSELDADVDVGSI
RGLSGNVDVKFASTGAVPGDRIVGIMDQSKGITIYPIQSPSLQRFDDQPD
RWIDVRWDLDEANKSRFMARIMVNALNEPGTLAKVAQTVAGLDVNIRMLN
TVRVAADFTEMMLEVEVWDLRQLNQLLAQMKELDCIATVRRLYE
>RHE_PF00572 repBf1, plasmid partitioning protein RepBf1
MARKNLLEGLAEMPDENAGAPNYPMRGAGRSLVRSLDELAKQAEKFLEGE
AVVDLDPELVETSFVKDRLSEDDEAFRTLVEAIRARGQDTPILVRPHARI
DGRYQVVFGHRRLRAARELGRNVRAVVKAIDDRTHVIAQGQENSARADLT
FIERALFAKRLEELGYDREVISTALAANAASVSKMMSVMERLSREVVQAI
GSAPGVGRERWVELSLLAGKAANAANVAKVLEGDNFHQLPSDKRFEALYA
ALNKSARPVKKTVAPRKVTWQPLDKAVQAEMKNDGKAFSLSMKARNAGRF
GEFLSGRLDALYEQFLAEESKQGD
>RHE_PF00213 repBf2, plasmid partitioning protein RepBf2
MARKNLIEISAPSAARVEAIAPRDNRPIAGFVPQERVGVPVGGITKTLGN
ITEKMERAGELERQLAAGQMIIELDPSLIDASFVSDRLAIDAAELADLVE
QIREHGQQVPILVRPHPEAKGRYQVAYGHRRLAAIRDIGIKVRAVVRDLT
DDQLVVSQGQENSARTNLSYIERALFASRLEERGFGRDVIMAALSVDKAA
LSRMLIVMRQVPLDLINAIGAAPEIGRRRWLELGDRLEKADVRTIIAELS
ADDARRISSDERFHRALVLATKKTAAPKPAVAKTEVNGVPVMIKKTAAGA
TFVFDGKTAPGFDRFVQERLQGLFQEFKKHRGA
>RHE_PF00212 repCf2, plasmid replication protein RepCf2
MESGYVTTPFGRRPMSLGMLASQQQAGTIEPGMMRSKWKLFRAICEARPA
LGVTDRALTVLDALLTFYPDDEISEEKGLIVFPSNAQLSLRARGMTPATL
RRHLAVLVEAGLILRKDSPNGKRYARRDRAGAIGEAYGFSIAPLLARAVE
IENLAAQAVADRELLRATRERLTICRRDISKLISAAIDEAVPGDWEQMTV
MFRALVARIPRVASTEELASLLEEMGLLRDEAVNLLERQIKREKLDANES
QIERHKQNSNPDSTIELEPSFDTKQGEKAAANNEGVAEPSDSQRLKLPRP
SAGSGGKAPNAANPIAGHSLKSFPLGLVLQACPAILDYGPGGAIANWRDL
MSAAVVVRSMLGVSPSAYEEACAGMGPENAATVIACILERGGHINSPGGY
LRDLTRRTERGEFAIGPMLMALVRANGGAKRHAG
>RHE_CH02265 rhlE1, ATP dependent RNA helicase protein
MRHAIPPTRSELGRTGTETVFPLTTFADLGLSQKVLSAVTDAGYTIPTPI
QAGAIPFALERRDICGIAQTGTGKTASFVLPMLSLLEKGRARARMPRTLI
LEPTRELAAQVAENFEKYGKNHRLNVALLIGGVSFEDQDRKLERGADVLI
CTPGRLLDHFERGKLLMSGVEILVIDEADRMLDMGFIPDIERIAKLIPFT
RQTLFFSATMPPEIQKLADRFLQNPERIEVARPASAAKTVTQRFVASHSK
DYEKRAVLRELVRAQTELKNAIIFCNRKKDVADLFRSLERHGFNVGALHG
DMDQRSRTMMLQNFRDGNLQLLVASDVAARGLDIPDVSHVFNFDVPIHSE
DYVHRIGRTGRAGRSGAAFTLVTKRDTKFVDAIEKLIGEKVEWLNGDLNS
LPPAEESADSDRPRRNSRERGAKGERGERDRGRGRGNRSAAGHKSDNDIQ
DSDVQVIAAAPAKAEVVKNERKAEQKPQNNARNNRPYPANDDSRDRRRHR
DHDDGPTPVGFGDDIPAFMLIAGSAKV
>RHE_CH03152 rhlE2, ATP-dependent RNA helicase protein
MKPDRMVRSGASRCGAPKGYTLTNFESLGVSKPIVATLFQLGIETPTPIQ
EQAIPLLLEGRDLIGLAQTGTGKTAAFGLPLIEKLLADERRPDNRTTRTL
ILAPTRELVNQIAENLKKFIRKSPLRINVVVGGVSINKQQLQLEKGTDIL
VATPGRLLDLVNRRAITLTTVRYLVLDEADQMLDLGFVHDLRKIAKLVPK
KRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGG
KNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGN
KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDA
YVHRIGRTARAGRDGIAIAFCAPDEAKLLRDIERLMGIDITVASGEPPAH
ISAGGPRRGNGNGNNRNRGGGQGRGEGRGDQNRSEHRGSRPERRPRPERP
GRNEDFRGQRRGEAAADFGPDNDLASTSDFRPAKPQRPAHNGPNGHHANG
EPSGHHRGNGRHAHGRPARKHGEDRGPHQAQGGEQRRDGNGGNRRGGSGS
RNGGQRRERA
>RHE_CH04124 rho, transcription termination factor protein
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDV
EIIGEGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTV
EGPIRGPKEGERYFALLKVNTINFDDPEKIRHKVHFDNLTPLYPNERFKM
ELEIPTSKDLSPRVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITA
NHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAVRHVQVAEMVI
EKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDR
KVADKRIFPAMDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIE
FLIDKLKQTKNNSDFFDSMNT
>RHE_CH00735 rirA, rhizobial iron transcriptional regulator protein
MRLTKQTNYAVRMLMYCAANEGQLSRIPEIAKAYGVSELFLFKILQPLNK
AGLVETVRGRNGGVRLGKPAADITLFDVVRVTEDSFAMAECFEDDGMVEC
PLVDSCGLNSALRKALNAFFAVLSEYTIDDLVKARPQINFLLGLTGEQAY
RKPAIVAPAA
>RHE_CH01390 rnc, ribonuclease III protein
MSKAQTLSAADRAKLEALIGHDFAEKERLDRALTHASARTEKGSNYERLE
FLGDRVLGLCIAELLFRTFGTAGEGELSVRLNQLVSAETCAAVADELNLH
LYIRTGADVKKLTGKRMMNVRADVVESLIAAIYLDGGLEVARRFILRYWQ
GRAVRADGAKRDAKTELQEWSHAKFGVTPIYRVDERSGPDHDPRFRVTVE
VAGIKPESGVERSKRAAEQVAATKMLEREGIWQQSPAGN
>RHE_CH01637 rnr, exoribonuclease protein
MSRTPRDRTNLAGKRPGKIGRAGRDVSAVEPLNIVHGTLPSREVILRFIA
DHPQKASKRELAKAFGLKGDSRVELKHMLQELEQEGMLQKSRKSLIRPGA
LPPVTVLDITTRDKDGDLIGRPAEWPEEQGVAPAVAIRQQSPAGRQKGKA
PVAGLGDRILAKIFPAVDRGGPAYTARIIKVIDRRRGAAMGVFRSAPGGG
GRLLPIERRGEEMVIDPDYTGGAEDGDLVEIEVARLGRFGLPRAKVLSVV
GSVGSEKAISTIAIHAHGIPHVFPPAVIAEAEAAKPATMSHREDWRDVPL
ITIDPADAKDHDDAVYAELDPSPDNPGGVIVTVAIADVSWYIRPNSPLDR
EALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMSFSGEGR
KIGHTFHRIMMKSAGKLSYQQAQAAIDGRPDDKTGPMLETILKPLWHAYG
VMKRGRDRRQPLELDMPERKILLKPDGTVDRVFVPPRLDAHKLIEEMMIQ
ANVCAAETLEKKRQPLVYRIHDGPTLAKQEVLREFLATLGISLAKGGNVR
ANSFNGILAKAEGTAHQTMVNEMVLRSQSQAIYSPENIGHFGLNLMKYAH
FTSPIRRYADLIVHRALVGSLGLGEGGITPDEEASLDDIAAEISTFERRA
MAAERETIDRLIAHHLSTRVGEEFAGRVSGVTKSGLFITLPDYGADGFVP
ISTLGTDYFIYDEAHQALSGEKTGLGYRLGDSVTVKLAEAIPLAGALRFE
MLSEGREMPTAVRSFHKAGRRDRDQVRKKPGTRPPRGRR
>RHE_CH01699 rpoA, DNA-directed RNA polymerase alpha chain protein
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLS
SLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKR
MVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGK
GYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLNM
TIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEEEAVTELAFNP
ALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
>RHE_CH01667 rpoB, DNA-directed RNA polymerase beta chain protein
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGR
PDEGLQAVFKSVFPITDFSGASMLEFVSYEFEPPKFDVDECRQRDLTYAA
PLKVTLRLIVFDIDEDTGAKSIKDIKEQSVYMGDMPLMTNNGTFIVNGTE
RVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDAKD
IVYARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYKRDGEGWRIPFK
PETLKGAKAITEMVDADTGEVVVEAGKKLTPRLLRQLSDKGLKALKAGDD
DLYGNYLAEDIVNYSTGEIYLEAGDEIDEKTLAVILANGFDEIPVLGIDH
INVGAYIRNTLSADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFF
DAERYDLSAVGRVKMNMRLDLSVEDTVRTLRKDDILAVVKMLVELRDGKG
EIDDIDNLGNRRVRSVGELMENQYRLGLLRMERAIKERMSSIEIDTVMPQ
DLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRLSALGPGGLTR
ERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRIVDGKVTNDVLYLSAMEEAKYYVAQANAELNADGSFVDEFVVCRHAG
EVMLAPRDSMNLMDVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAV
PLLRAEAPFVGTGMEPVVARDSGAAIGARRGGVVDQVDATRIVIRATEDL
EAGKSGVDIYRLQKFQRSNQNTCVNQRPLVTVGDVVNRGDILADGPSTDL
GDLALGRNALVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMAR
DTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTIVEVRVFNRHGVEK
DERAMAIEREEIERLAKDRDDEQAILDRNVYGRLIDMLRGQVSIAGPKGF
KKGTELSNAVVSEYPRSQWWMFAVEDEKVQSELEALRGQYDESKSRLEQR
FMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSR
IVPVEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLGWACAGMGRQI
GELIEAYKANGNIEPLRKTIGDVVGAGPKAEQVHEFDDESVLRLADQWKR
GVSIATPVFDGANEGDVNDMLRLAGLKDTGQSTLYDGRTGEQFDRQVTVG
YIYMLKLNHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVK
EMRSLGLSVELENTKLDEAQATQLPDAAE
>RHE_CH01668 rpoC, DNA-directed RNA polymerase beta` chain protein
MNQEVMNLFNGQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTF
KPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRR
ERMGHIELAAPVAHIWFLKSLPSRISTLLDMTLKDVERVLYFENYIVTEP
GLTALKEHQLLTEEEYMLAVDEYGEDQFTAMIGAEAIYEMLASMNLEKIA
GDLRSELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMIMKVVPVIPPD
LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVD
YSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK
KLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGKAIQ
LHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGAP
IIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALESKVVTLHTKI
RGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFGKDDMVIPATK
AKIVADTENLVKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMAR
IKAVEFDENTGRQKPMNSIYMMSHSGARGSPNQMRQLGGMRGLMAKPSGE
IIETPIISNFKEGLTVNEYFNSTHGARKGLADTALKTANSGYLTRRLVDV
AQDCIVTHVDCGTETGLTMTAIVDAGQVVASLGARILGRTALDDIDHPVT
GERIVDAGKMILEPDVIEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASY
EGTVQIKNRNVLRNSEGSLVAMGRNMTVQILDERGVERSSQRVAYGSKLH
VDEGDKVKRGQRLAEWDPYTRPMMTEVAGTVQFEDLVDGLSVLEATDEST
GITKRQVIDWRSTPRGSDLKPAIVIKDASGNVAKLSRGGDARFLLSVDAI
LSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFEARRPKDHAII
AEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQDGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEV
IVRQMLQKVEITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPASGEPV
LLGITKASLQTPSFISAASFQETTKVLTEAAIAGKTDGLQGLKENVIVGR
LIPAGTGGTMTQIRRIATSRDELILEERRKGTGAAVATPMLQDMAENAPA
AE
>RHE_CH00746 rpoE1, RNA polymerase sigma factor protein (sigma-24)
MEPERHVRMSVALTSFPAYSRARTESPVHPAVSKNAGSSEAAIASEADIR
SGLTENLARLWRYGLVLSHQRDVADDLAQATCLRALERADQFVPGTRLDR
WLFSILHSIWLNEIRSRRVREGQGFVDASEVLIFDGAHDTETHVMASQVL
RRVSALPEAQRTAVFLAYVEGLSYREVAGILDIPIGTVMSRLASARARLS
GDGTEGGRQ
>RHE_CH02779 rpoE2, RNA polymerase sigma factor protein (sigma-24)
MSPNLDAKRAGVKTPAPETFEGQILALLPSLRRYSRSLTRSDADGEDLLQ
DCVEKVLTRRGQWRGLNLRGWVLTIMTNLYRNGRRGKARDGLVELDAAQD
VAAPEPPADPLERARLDNALNSLSEEHRAVLMLVVIEGYSYSEVAAALEI
PIGTVMSRLSRARQRIAERLKADNVITLRRPK
>RHE_CH03065 rpoE3, RNA polymerase sigma factor protein (sigma-24)
MRQPATTIDLRRDLVGLLPHLRRFAITLAGEATVADELVQAVCLRAIAKG
HHWNGEGRLESWIYTLARQQWTEDSRKRKPKASARGNITDIREAARERSA
SVDPDAIHRMIAEMPDGVSSIFLLVDVEGHSYQQAADIMGISTASVVSQL
ATARLHFAGLAGTHPIHRY
>RHE_CH03273 rpoE4, RNA polymerase sigma factor protein (sigma-24)
MEEKLQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQD
HFEMGTNMKAWLFTILRNELYSQMRKSGREVQDSDGLFTESMAMHPSQYG
ALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRV
NRARQRLQELLQISGEADFGPDATSAPLTSKAFAF
>RHE_CH03342 rpoH1, RNA polymerase sigma factor protein (sigma-70)
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAA
HKLVTSHLRLVAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFR
LATYAMWWIKASIQEYILRSWSAVKMGTTANQKRLFFNLRRLKGRIQAID
DGDLKPEHVSEIATKLNVSEEEVISMNRRLSGDASLNAPIKAAEGDSGQW
QDWLVDDHESQEDVLIEQDELETRRRMLAKAMSVLNERERRIFEARRLAE
DPVTLEDLSAEFDISRERVRQIEVRAFEKVQDAVRKEALERAKAIRVVEA
TA
>RHE_CH04026 rpoH2, RNA polymerase sigma factor protein (sigma-70)
MKNMSADRRMIKIAMAAPYLARQEEHDLATRWKDHDDRGARNQIAMAHMR
LVISMAGKFRNFGLPMSDLVQEGYVGLLEAAARFEPERDVRFSTYASWWI
RASIQDYILRNWSIVRGGTSSAQKALFFNLRRLRAKLARGDTQLTLQSIH
QEIAAALGVSLADVQTMDARLSGNDASLQAPSVSGDAESAEKMDFLVSDD
PLPDEQVSNMIDGERRRVWLASALKHLNEREMKIISARRLAEDGATLEEL
GADLGISKERVRQIESRAMEKLRSALVSADPHMAAYA
>RHE_PF00462 rpoI, RNA polymerase sigma factor protein
MRASHRDVNGNAVVNAMIENKDKLLKTIESVIKSRSYSEDIFQDGVIKAY
GVNVEGVRCPIGYAFRMVYNLALDESRRRRQQMNNYRSIDQVQEMTAPIP
TVLDQLVAAETLRDVLASLEALPKRTNDAFIRHRLNGVPQKDIAAELGVS
RTLVNFMIKAAEQHCHLAMTEPARPDHERPREITASRRAAPAANRSTAIP
ALPAQQRNGSSARSRRTG
>RHE_CH00404 rpoNch, RNA polymerase sigma factor protein (sigma-54)
MALSANLFLRQSQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVEKNPLLE
FPSNDGEAGDERAAGEDEQFGHSPEDAGSDDGADNRAEALSSDWYDNGGS
ESSSRLNDELDANYTNVFPDDGGPQRLDAPELVGQWKSMPGSADGADYDL
DDFVAGQVSLRDHLAQQIPFVLPDMSDRLIAQKFIDQLDDAGYIQVDLLE
TGERLGTSLTQVEHVLAALQTLDPPGVFARSLAECLAIQLRQKDRYDPAM
QALVENLELLARRDFATLKRLCGVDEEDLLDMLGEIRQLNPKPGSGFETG
VSEAIMPDVVVRPSAEGGWLVELNPDTLPRVLVNQSYFSRVTRNGEDHAF
LSECLQSANWLTRSLDQRAKTIMKVASEIVRQQDAFLLHGVDHLRPLNLK
TVAEAIKMHESTVSRVTSNKYMLTPRGLFELKYFFTVSIGAVEGGDSHSA
EAVRHKIRALIMQESPEAVLSDDDIVDMLKKGGVDLARRTVAKYREAMNI
ASSVQRRREKRALAKVAGF
>RHE_CH01384 rpoZ, DNA-directed RNA polymerase omega chain protein
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVAL
REIADETLSPDDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGAAAADSEE
QDDLPETITFDQMSEEELLAGIEGLVPPEKSDDY
>RHE_CH02950 sigA, RNA polymerase sigma factor protein (sigma-70)
MATKVKENEDAEVERDGASDGPLLDLSDDAVKKMIKAAKKRGYVTMDELN
AVLPSEEVTSEQIEDTMSMLSDMGINVIEDEEAEEAGASGGGDDDDAGGD
EDSEGGELAPSAGTALATAKKKEPTDRTDDPVRMYLREMGSVELLSREGE
IAIAKRIEAGRETMIAGLCESPLTFQALIIWRDELNEGTTLLREIIDLET
TYSGPEAKAAPQFQSPEKIEADRKAAEEKEKTRRARSGDDDITDVGGEGL
PPEEEEEDEDESNLSLAAMEAELRPQVMETLDIIAETYKKLRKLQDQQVE
QRLAATGTLSSAQERRYKELKDELIKAVKSLSLNQNRIDALVEQLYDINK
RLVQNEGRLLRLAESYGVKRDSFLEQYQGAELDPNWMKSIGNLAARGWKE
FAKAENTTIRDIRQEIQNLATETGISISEFRRIVHMVQKGEREARIAKKE
MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFS
TYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREP
TPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKNA
LLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQ
QFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS
>RHE_CH00429 sigK, RNA polymerase sigma factor protein, ECF family
MNDRTEAEEALQEVYISIWQRARSFQAASGSSSAWLSAIARNRSIDLLRA
RKPVADELDSAYDLADAAPDPERQAVTKDDGRRIDTCMEELEADRAVAVK
RAYVEGLSYQELADQFGVPLNTMRTWLRRSLLKLRECMER
>RHE_CH03683 smoC, sorbitol/mannitol operon transcriptional regulator protein
MAKRSETPARLDDAARAGWLYYVAGRTQDEIAAAMGISRQSAQRLVSLAV
AERLIKVRLDHPIAACLELANQLRRKFGLKHVEVVPSDAGSSSTTVGIAE
AGAAEIERWLKRPEPIVLAVGTGRTLKAAVDQLPAIECPNHRIVSLTGNI
APDGSAAYYNVIFSMADAVKARHYPMPLPVLVTSAEERELLHGQQLVRST
LDMSAQADVTFVGIGELGIDGPLCVDGFLEKDEMMELMRGGAVGEICGWI
FDVDGKLLDNPINERVASAPIPSREASMVIGLAKGKRKYKAIRAAVIGHQ
INALITDEETAEFLLTS
>RHE_CH03863 soxR, redox-sensitive transcriptional regulator-activator protein
MNRISATPLGRLLTVGEVAQRSGLAVSALHFYEAKGLISSIRTRGNQRRY
GRDVLRRLGIVKVAQRVGIPLSEIQTAFASLPQGRTPTVADWQTLSARWK
DELDTRIRRLSLLRDRLTGCIGCGCLSIESCPLRNPFDRLGEEGPGPRLL
ESENEV
>RHE_PF00211 thuR, trehalosemaltose transcriptional regulator protein, LacI family
MKLREFAKQLGLSPTTVSRALSGYPEVSEATRARVASEATRLGYRPDINA
VRLKTGRAGAIGVMMARSGEIHFAEFMSGMAQRLETADTDILITPITAHN
DDDEIQAYRRLVESRRVDAVIIHSPRPRDPRIEMLSSLRLPFLVHGRSET
EHVHAWLDIDNENAVRRSTEHLLDLGHRRIAMINGLRGKTYSIHREQGFR
LAHQERGLIADPNMMICDKFSDESGFRHARSFLERANAPTAIVAGSTMTA
LGVYRAVRSLGMTVGQDVSVIAHDDVFPYLTAENMVPSLSTTRSSMRAAG
TRCAELTLQLIAGRAAEEVHELWPVELILRESTAPPR
>RHE_CH03300 ureG, urease accessory protein
MKSRNGPLRVGIGGPVGSGKTALTEKLCKAMRDDYSVAVVTNDIYTTEDA
EALVRMQALPSDRIVGVETGGCPHTAIREDATINLQAIAGLNERIPDLDV
VFIESGGDNLAATFSPDLADITIYVISVCQGEEIPRKGGPGITRSDLLVI
NKKDLAPYVGADLEVMDRDATRMRASRPFVFSDMKRGDGVSSIVNFLREQ
GGL