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2024-05-05 19:09:06

Gene list

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COG category: Transcription
Organism: Nitrosococcus oceani ATCC 19707, ATCC 19707

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Nitrosococcus oceani ATCC 19707, ATCC 19707
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Noc_0569 transcriptional regulator, Cro/CI familychromosome CDS616565 354 + 0.550847
NA Noc_2206 Transcriptional regulator, AbrB familychromosome CDS2549811 243 - 0.530864
NA Noc_3082 ParB-like partition proteinchromosome CDS3473637 876 - 0.501142
NA Noc_2330 DNA-directed RNA polymerase, alpha subunitchromosome CDS2669642 4212 - 0.487654
NA Noc_2491 Protein of unknown function UPF0074chromosome CDS2837326 477 - 0.524109
NA Noc_1096 conserved hypothetical proteinchromosome CDS1202901 303 + 0.547855
NA Noc_1147 transcriptional regulatory protein, MerR familychromosome CDS1255205 357 + 0.456583
NA Noc_2044 Transcriptional regulator, AbrB familychromosome CDS2353853 249 - 0.401606
NA Noc_2684 Anti-sigma-28 factor, FlgMchromosome CDS3040653 324 + 0.459877
NA Noc_1027 transcriptional regulatory protein, MarR familychromosome CDS1137493 522 - 0.519157
NA Noc_1636 Ribonuclease BNchromosome CDS1827782 1344 + 0.467262
NA Noc_2401 Phosphate regulon transcriptional regulatory protein phoBchromosome CDS2750894 690 - 0.555072
NA Noc_0660 conserved hypothetical proteinchromosome CDS713769 906 - 0.537528
NA Noc_2300 DNA-directed RNA polymerase, alpha subunitchromosome CDS2651873 999 - 0.44044
NA Noc_0686 chromosome partitioning proteinchromosome CDS742909 162 + 0.5
NA Noc_2592 Transcription termination factor Rhochromosome CDS2945628 1257 - 0.479714
NA Noc_0676 Two comoponent transcriptional regulator, winged helix familychromosome CDS733591 696 - 0.557471
NA Noc_2967 Protein of unknown function UPF0074chromosome CDS3353799 462 + 0.419913
NA Noc_0203 Cu(I)-responsive transcriptional regulatorchromosome CDS223337 408 - 0.52451
NA Noc_2458 Ribonuclease IIIchromosome CDS2804551 702 - 0.497151
NA Noc_2609 Cold-shock protein, DNA-bindingchromosome CDS2964160 210 + 0.466667
NA Noc_1088 trancriptional regulatory protein, MarR familychromosome CDS1193648 600 - 0.486667
NA Noc_0414 hypothetical proteinchromosome CDS455863 279 - 0.408602
NA Noc_1354 two compnent transcriptional regulator, winged helix familychromosome CDS1500026 660 + 0.580303
NA Noc_0189 Bvg accessory factorchromosome CDS207230 801 + 0.514357
NA Noc_1474 ECF sigma factorchromosome CDS1634128 567 - 0.536155
NA Noc_0545 Helicase-likechromosome CDS584133 2733 - 0.622393
NA Noc_1303 RNA binding S1chromosome CDS1446114 2298 + 0.497824
NA Noc_0616 Prophage CP4-57 regulatorychromosome CDS664804 246 - 0.520325
NA Noc_0368 Protein of unknown function DUF179chromosome CDS400863 564 - 0.52305
NA Noc_2292 transcriptional regulatory protein, LysR familychromosome CDS2645086 921 + 0.507058
NA Noc_2813 Negative regulator of class I heat shock proteinchromosome CDS3189550 1050 - 0.489524
NA Noc_1567 Helix-turn-helix protein, CopG familychromosome CDS1743105 243 + 0.526749
NA Noc_0617 Peptidase S24, S26A and S26Bchromosome CDS665310 678 - 0.520649
NA Noc_1837 transcriptional regulatory protein, LysR familychromosome CDS2085820 951 + 0.540484
NA Noc_2793 Sigma-54, RpoNchromosome CDS3166839 1449 + 0.461698
NA Noc_1648 Iron-sulphur cluster assembly transcription factor IscRchromosome CDS1843366 501 + 0.477046
NA Noc_1702 RpoSchromosome CDS1905251 912 + 0.432018
NA Noc_1441 hypothetical proteinchromosome CDS1597838 936 + 0.461538
NA Noc_0199 regulatory protein, TetR familychromosome CDS216937 645 + 0.516279
NA Noc_0063 Type III restriction enzyme, res subunitchromosome CDS64658 2889 + 0.606438
NA Noc_0803 NusB antitermination factorchromosome CDS875762 447 + 0.496644
NA Noc_1716 Protein of unknown function UPF0074chromosome CDS1920232 426 + 0.469484
NA Noc_2121 Transcription termination factor NusAchromosome CDS2443399 1521 - 0.496384
NA Noc_2897 Ribonuclease Rchromosome CDS3275464 2169 - 0.55325
NA Noc_2066 RpoDchromosome CDS2376951 1740 + 0.521839
NA Noc_2820 transcriptional regulator, TetR familychromosome CDS3196829 642 + 0.515576
NA Noc_2410 transcriptional regulatory protein, LysR familychromosome CDS2757529 978 - 0.635992
NA Noc_0290 Penicillinase repressorchromosome CDS317679 408 + 0.539216
NA Noc_2781 BolA-like proteinchromosome CDS3158123 228 - 0.513158
NA Noc_2331 DNA-directed RNA polymerase, beta subunitchromosome CDS2673930 4080 - 0.465931
NA Noc_0045 RpoDchromosome CDS43212 1809 + 0.478718
NA Noc_1300 RelA/SpoT proteinchromosome CDS1438866 2145 - 0.529138
NA Noc_2611 DEAD/DEAH box helicase-likechromosome CDS2965264 1503 + 0.510978
NA Noc_2542 transcriptional regulator, XRE familychromosome CDS2891872 498 - 0.528112
NA Noc_1864 Conserved hypothetical protein 2243chromosome CDS2118695 2079 - 0.497835
NA Noc_2571 transcription elongation factor GreAchromosome CDS2923264 477 - 0.48218
NA Noc_1652 transcriptional regulator, XRE familychromosome CDS1847033 231 + 0.419913
NA Noc_0964 Stage II sporulation Echromosome CDS1064683 744 + 0.532258
NA Noc_2944 transcription regulator containing HTH domain-likechromosome CDS3332276 468 - 0.467949
NA Noc_1364 Helicase c2chromosome CDS1510384 1923 + 0.525741
NA Noc_0256 S-layer protein, putativechromosome CDS282317 1062 - 0.548964
NA Noc_2484 Transcriptional activator RfaHchromosome CDS2830902 525 + 0.491429
NA Noc_0384 hypothetical proteinchromosome CDS425856 381 + 0.580052
NA Noc_2582 DEAD/DEAH box helicase-likechromosome CDS2935489 1296 - 0.469136
NA Noc_1918 transcription elongation factorchromosome CDS2195239 390 - 0.535897
NA Noc_1049 Helix-turn-helix, Fis-typechromosome CDS1156596 327 - 0.489297
NA Noc_0659 DEAD/DEAH box helicase familychromosome CDS712450 1323 - 0.54195
NA Noc_1935 RpoHchromosome CDS2213065 864 + 0.497685
NA Noc_1028 Ectoine synthasechromosome CDS1138167 402 + 0.504975
NA Noc_1040 chromosome segregation and condensation protein ScpBchromosome CDS1149255 669 + 0.496263
NA Noc_0449 conserved hypothetical proteinchromosome CDS485289 297 - 0.468013
NA Noc_2738 transcriptional regulator, XRE familychromosome CDS3108487 288 - 0.53125
NA Noc_1919 transcriptional regulatory protein, LysR familychromosome CDS2195760 924 + 0.517316
NA Noc_0891 transcriptional regulator, GntRfamily, with Aminotransferase domainchromosome CDS971206 1515 - 0.489769
NA Noc_0334 transcriptional regulatory protein, LysR familychromosome CDS361375 906 + 0.513245
NA Noc_2155 Sigma28 (Flagella)chromosome CDS2489824 705 - 0.524823
NA Noc_2060 transcriptional regulator, MarR familychromosome CDS2368933 708 + 0.54661
NA Noc_1216 ATP-dependent DNA helicase RecGchromosome CDS1329485 2139 + 0.558672
NA Noc_0619 hypothetical proteinchromosome CDS666360 1533 + 0.53816
NA Noc_0283 transcriptional regulator, XRE familychromosome CDS312416 309 - 0.540453
NA Noc_2930 transcriptional regulator, XRE familychromosome CDS3315526 339 + 0.528024
NA Noc_1521 conserved hypothetical proteinchromosome CDS1686789 210 + 0.519048
NA Noc_2466 Sigma 24, FecI-like, ECF familychromosome CDS2812129 579 - 0.471503
NA Noc_0057 conserved hypothetical proteinchromosome CDS57899 1668 + 0.543165
NA Noc_1213 RNA polymerase, omega subunitchromosome CDS1326641 261 + 0.521073
NA Noc_2026 Protein of unknown function DUF193chromosome CDS2338195 525 - 0.56381
NA Noc_2877 Urease accessory protein UreGchromosome CDS3257843 612 - 0.511438
NA Noc_1465 conserved hypothetical proteinchromosome CDS1621788 2745 + 0.507104
NA Noc_1642 Transcription-repair coupling factorchromosome CDS1833219 3477 - 0.50302
NA Noc_1057 hypothetical proteinchromosome CDS1163559 462 - 0.482684
NA Noc_2538 Transcriptional regulator, AbrB familychromosome CDS2889675 270 + 0.551852
NA Noc_1214 RelA/SpoT proteinchromosome CDS1326967 2130 + 0.5277
NA Noc_0656 helicase, DEAD/DEAH box familychromosome CDS709314 2283 - 0.537013
NA Noc_2336 transcription antitermination protein NusGchromosome CDS2680701 534 - 0.486891
NA Noc_0183 RpoSchromosome CDS202201 966 - 0.462733
NA Noc_1562 Proteinase inhibitor I3, Kunitz legumechromosome CDS1737008 489 - 0.470348
NA Noc_0445 Helix-turn-helix protein, CopGchromosome CDS480279 243 - 0.518519
NA Noc_2545 Transcriptional regulator, AbrB familychromosome CDS2894285 270 - 0.451852
NA Noc_2760 Hg(II)-responsive transcriptional regulatorchromosome CDS3132209 408 + 0.615196