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# Thiobacillus denitrificans ATCC 25259, ATCC 25259

>Tbd_0533 Sigma-54 factor transcription regulator protein
MKHSLQLKLGQHLTLTPQLQQSIRLLQLSTLELNQELEQMLQDNPLLERE
DDDEANHAATEAPAHTAEAEAQSSETPQLERAEAEPVTTLDDSDWNDYSA
GSADEDEDGDYAQGSVAGATLREHLLNQLIVSPLTVRDRVLVAALIDDLD
EAGFLTQPLEDITASLRDELEDLEHEEVETALKHLQNMDPTGVGARNLAE
CLTLQLRALPDDTPVRAAAMRLTTHYLELLAARDVGKLKKMLGIDDPTLR
AARALILSLNPRPGSAFSAEQTHYVIPDVYVRKVKGMWIASLNADAMPKL
RVNRVYADILARHRESGGSQLASQLQEARWLIKNVQQRFDTILRVSQAIV
DRQKHFFEHGEVAMRPLVLREIADAVDLHESTISRVTTQKFMMTPRGLYE
LKYFFGSHVATDNGGACSSTAIRALIKQLIAAESGKKPLSDGQLADVLGQ
QGIVVARRTVAKYRESLQIPPANMRRAL
>Tbd_1287 Two component Transcriptional regulator, Winged helix family
MESKRILVVDDDQELLDMVCRYLGENGLDAHAAADSVHMDAWLASSRPDL
IVLDVMLPGEDGLSVVKRLKSRLDVPVLMLSARSSDVDRILGLEMGADDY
LTKPFHPRELLARIHARLRRSPAPRQEDALEAGSFRLDFVRRDAYKHGQP
LALSTADFSLLSLLMRHSHRVLDRTQLVDLASAMERMPFNRSIDVRVARL
RRKIEDDPAQPRYIRTVRGSGYLFVPDGGDER
>Tbd_0679 Possible Cold-shock DNA-binding domain protein
METGTVKWFNDAKGFGFITPDNGGEDLFAHFSAINANGFKSLQENQRVSF
EVTTGPKGKQASNIQVVS
>Tbd_0469 ATP-dependent DNA helicase RecG
MKTASPFSFPVSPALAAKLAKLGLKRDSDLILHLPLRWEDETRITPIGEL
LPGQTAQVQACVREAKVTYRPRRMLTLIVEDDSGVLGVRFLHFYPSHLKA
FQAGARFRFNGEVRGGFLGLEMVHPRFAKADDDTPLPAGLTPVYPTTAGL
GQASLRKLIERALAAPIDETLPPEWREELGLAELESSIRLLHQPPPGCAQ
HALESRAHPAWQRLAFDELLAQQLSLATSRQAREARTTLPLPHRRRLTAA
FVDTLAFELTAAQARAWQEISTDLAAPHPMRRLLQGDVGSGKTVVAALAC
LQAVENGMQAAFMAPTEILAEQHYRKLAPTLAALGVRSGWVSGSQRRAER
EAAWRAIAAGEADLAFGTHALFQEAGNFCRLGLVVVDEQHRFGVGQRLAL
MGKGTEPHQLMMSATPIPRTLAMSFFADLDVSAIDELPPGRTPIVTKLVS
AARRDEVLARVRDACVGGGQAYWVCPLIEESEKLQLQTAEDTYGTLVEQL
PGLRIGLVHGRLKAEDKQSVMAAFQSHEIDLLVATTVIEVGVDVPNAALM
VIEHAERMGLAQLHQLRGRVGRGARESVCVLLYETPLSELARARLKVIFE
HSDGFEIARQDLLLRGPGELLGQRQSGLPMLRFADLERDVALLERARDLA
QRCLRERPEVAARHVERWLGSRQAYSGS
>Tbd_2388 Carbamoyl-phosphate synthase L chain, ATP-binding
MIFSGAVHSVTENISGEKPVAVRGRKPGGGAKKPEALLPLKELTPVEAEA
RRTQLKNLIILGKERGFLTYAEINDHLPDEVLDADQIEGVISMINDMGIQ
VYDEAPDAETLLMQEAAPAVADEDVVAEAEQALTTVDSEFGRTTDPVRMY
MREMGSVDLLTREGEIEIAKRIEEGLRHMVQAISSCPLTIQQILDMAAQV
EKDELRIDELIDGFVEAETEAAAEEETAAGDDETDEDDEDASAAVAAANL
AQLKAEALAQFDYIRKAYKKAQNAHVKYGLGSAQHMKAQAEVTELLMAIR
FSVRQVDNLCEQIRSAVEEVRSHERKIMEFCVNRSGMPRAHFIKAFPGNE
TNLAWLDREIAAKKAYCSTLSKVQYEVKAHQEALIAMQDRVGLPIKNLKD
INKQMSTGEAKARRAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETI
NKMNRISRQILQETGIEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETP
IGDDEDSHLGDFIEDASTLSPDDSAIYANLRDATREVLDSLTSREAKVLR
MRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSEKLKSF
VGSGEQ
>Tbd_2822 Possible Transcriptional Regulator
MCGLFAFTGPEREIMAARNESAIREAKETRILRRKQVEARTGLSRSSIYA
RLRQNPKRPGDYDPTFPKPVSVGAKAVGWIEAEIEAWLTAQIQKSRKA
>Tbd_0351 Transcriptional Regulator, LuxR family
MNNAIELGDEDCGHLARILLASRRVNLRHNFFSWVHGPVQSLIPHEILLC
GIADEGGYLLHQRFTACRYFKDDHYHRVIHPADGLIHQLTHEWGAKREPR
LIAALTDDPDGWHRRLLDLELKNLAFHGLCRVDGQMWGYASFSRLRVPFD
ARLALFMELLLPHLLVTLARVLANEARTRSLGDRHAGLITAREAEVLAWV
RDGKTNEEIAAILGLSMLTVKNHLRHAMQKLVVRTRGQAVARAIALGFLR
AQSSRRPE
>Tbd_2464 Two Component Transcriptional Regulator, LuxR family
MSLTRIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRP
DVLILDLNMPGTDGITLMQQLRNAGFALPILILTLSETEDDLARALRAGA
NGYLLKSMEPDEVVDAILRAQRGETVVAPAMTAKLVKLYDQKGQDAGSLL
DALTPREREILSHLSRGESNKAIARTLDISHDTVKLHVRHILAKLNLSSR
VEAAVFAVEHKVAPGSRSDGR
>Tbd_2604 transcriptional regulator, LysR family
MLNYKHLHYFRTVAKAGAINRAAEKLHLTPQTLSGQLSAFEQRLGVALFR
RSGRRLELTDAGHTALTYADEIFQVGAELEDALQNRAAAPVRPFRVGIAD
VVPKAIAYQLLAPALTLAEPVRLVCKEDRLEALAAALSIHRLDMVLADRP
LPSTMDVKGYSHPLGECGIAFLAAPAVAASAGSDFPANLHGAPLLVPGED
SALHGPLLRWLERRGLQPVVVGEFDDSALMSAFGQAGAGVFPVPLSTAGE
VMRQYAVVDLGRTLEIRERFFAISVERRLSHPAVVAVSEAAHQRFQHAND
D
>Tbd_0136 Two component Transcriptional regulator, Winged helix family
MRILLVEDDALLGDGLKAGLSQSGFAVDWLRDGEAAVTALTTERFAAVVL
DLGLPRRDGLSVLQWLRGRGDPTPVLVLTARDQLEDKVRGLDLGADDYVL
KPFDLDEVAARLRALMRRAHGKSAPLLKLGDIELDPAARSVTQRGQPVDL
TGREFDLLHVLLQSSGHVLTRRMLEEQLYTWDEGVGSNALEVHVHHLRRK
LGNDVIRTVRGVGYMAAPPT
>Tbd_2267 Transcriptional Regulator, MerR family
MNIGEAAAASGISAKMIRHYERIGLVRESGRTPAGYRQYEARDVHLLRFV
RRARDLGFSLEQIRQLLSLWEDPARASADVKRLAEAHIAELDARIAALSE
MRATLVTLARDCRGDHRPDCPILADLASPRAD
>Tbd_1249 RNA polymerase sigma-70 factor
MYTASGKTAKSEKNDLLEQYMPMVKRLAHHMMGRLPPSVEEDDLVQAGMI
GLLDAVSRYDEAQSAQFEAYAIQRIRGSMIDELRQSDWMPRSARQSMRKI
EQAIAALQHQLGRQPSEGEIAEAMKIPLADYQSMLGDARGHQLLYFEDFG
ESDEDDSFLDKQSADEATMPLPQLLDANLRACIIAGIENLPEREQLLMSL
YYEQELNLREIAEVFGVSESRICQLHGQAIARLRARLKEDSWIAAA
>Tbd_2457 Transcriptional Regulator, Fis family
MIEENEIAACVRRSLNRYFKDLDGEIPSEIYGMVVSAVEKPLLAYILDRA
EGNQTRAAEMLGINRNTLRKKMREHGLSD
>Tbd_1028 Transcriptional Regulator, MarR family
MPKQPEFLPTLRALVECYQAFEASSAADIRAAGLTPPQFDIVATLGNTAG
MTATELGEKTLITKGTLTGIVDRLVARGWVERAAHDSDRRCQIIRLTQAG
ERLFSTVFPAHMDYLAQRFAGTGAADHARWREALRGLEQIFRKEAS
>Tbd_1344 Transcriptional Regulator, XRE family
MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGT
VEMAARVGITRNTLRAVEAGDPAPSLGTYLRVMSALGISGELALLAGDTL
QPAPADSAAARSRRTAPVVQVHISADEGKHRLQDLQSLALHEEAVRLAKA
NPTLVRQAENTAKRWLATGDARSASLWLEWLNILGSGSWRKALGRTRHAQ
QLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTSQDAGCSKERQ
RREKNSST
>Tbd_2389 Possible Transcriptional Regulator, TetR family
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRH
FSSKAQMYEGLIEFIEQTLFGLIARIVADTHSPPAQVEAILVTLLSFATK
NPGMTRVLIGEALVHENTRLQKRINQLQDRIEAQLRQCLRLGGDRLANAS
APLANLLLCLVVGRWHQYAKSGFTRGPEGDVAFMLSHLLADAASTGSARA
TDRA
>Tbd_0732 RNA polymease sigma-54 factor protein
MNRPALALEPRQTQTLTPRLQQAVRLLQLSTFDFALELQELVSSNPFLEL
EDGEFADEDAAAPDTATTAADTPPAADGAQAEDYAETAYEERLGDGGEAP
GRYSEANADAIDFACAPVTLRQHVHSQLNMLDLPPREHFLAWIIAEALDD
DGYLRVELDALRAMAGLEPRVDAREMLAALTRVQSLDPAGLAARDVPECL
TLQLRRRPPSPQRELALRIVRDELKLLQQRDLQRIAQRVGSTPAEVEAVC
AYIRRLEPRPGACFGHHVAAAIRPDVIVRKIRGQWTALLNSSAVPRVSLN
RTYAELFQRHREPHHGDLAGHLREARWAVQNMEQRFSTILRVAQALVDRQ
QHFFEHGTLAMQPLGLKDIADELGLHESTVSRATCNKFMVTPLGVFELKY
FFSRALNTEQGSQCSTTAIREAIRKMILSEDARSPHSDADIARILMQQGL
RVARRTVTKYRQMMAIPNVDMRRYHG
>Tbd_0074 Possible Transcriptional Regulator, AsnC family
MSDIQLSLLNDFQRGFPLTSTPFDAIAQRLGLDVEALLDTLRRLTREGVV
SRVGAVFRPNRVGVSTLAAMAVPEGRLDEVARLVSARPEVNHNYEREHRF
NLWFVAAAANPAQLEQALHDIEQQTGLAAMRLPMVQDYHIDLGFDLRRSV
GLTDRHQQKAAPSRALELDALDYVLVEAIQEGLPLVARPYAEVAAFIGTS
EADVLIRLGRLLDHGVIKRLGIVVRHHELGFRANAMVVWNIPDEQVDEFG
RCVGASGLVNLCYQRPRRLPEWPYNLFCMIHGKDRDAVLEHLDHLRDQCG
LTDFPCEVLFSKRRFKQTGARYLAAQPKAAAEAT
>Tbd_1424 Putative Transcriptional Regulator, ArsR family
MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMES
KDAVIALSALAQATRLNIFRTLVEAGPAGLNAGRLAEIAAIPPSSLSFHL
KELSHAGLAESRQEGRFVVYSARFETMNRLLAYLTENCCGGTPCGASDTP
ACTGGGSS
>Tbd_2178 Possible Transcriptional Regulator, TetR family
MEIIRHEGVAKLTTRSLSQAVGIAQPTLFLHFGSKSHVLVALIDTIQERL
QQEMAGLGLARLPPLERLKAVIRAHLNFIQRQPGIPRLLFSEELQSGDPV
FRARMNGLVQFFLGFIADLIAAAQAEGEIRPEIVPQQNACILIAAVQGLA
FRWVLSDNRFELSEQADAVIATFIDGWAARP
>Tbd_2354 Two component Transcriptional regulator, Winged helix family
MGKETIYVTDDDRGIRELVAEYLTSQGYAVETAEDAAALDRLLAARLPDL
VVLDWMMPGEDGLSVARRLRARPGFPPIIMLSAKGEDIDRIIGLEVGADD
YLPKPFNPRELLARIRAVLRRQPTAAEPTESARLVRFGPFSVNLDARMLS
RDGVEIPLTGGEYELLEIFVRHANRALSRDWLMDQLRGFERDPFDRSIDV
RVNRLRKKIEDDPTNPAYIRTQRGQGYLFVPQGKG
>Tbd_0608 exoribonuclease II
MSSSKSRSRGAKHQVPAIRLADPFYARETERYESPLPSREYILQLLSDAG
CPLDVDAFAEQLQITEAERDLFQRRLGAMQRDGQLMLNRKRQLCLPDKLD
LIKGRVEGHPDGFGFVVPEEGGDDLFLSPKEMHRVLHGDKVLVRVAGFDR
RGRREAKIVEVLEHVNKFVVGRYYLEGGVGFLIAENRRINQDILVPPENA
GNAKSGQVVTVEIVSQPGAHNEAVGRVTEVLGSFTGPGMEIEIALRKHDL
PYVFPPEVEAQASKLPNKVLKKDLAGREDIRQLPLVTIDGETARDFDDAV
YCEPLGRSGYRLVVAIADVSHYVHPRDALDSEGFNRGNSVYFPRRVIPML
PEALSNGLCSLNPEVDRLSMVCDMRITTAGNIKEYRFYPAVIHSHARLTY
NQVWDWLSGAAKPEKKHAALMPHLEALDKLFRTLLKARAKRGAIDFGSTE
TQIVFDDNGKIKEIVPVIRNDAHRIIEECMLAANVCASDFLHENKQPALF
RVHEGPTPEKLTALRGFLAEFGLDLGGGDKPHAKDYAALLENIKDRPDHG
LLQTVMLRSLRQAIYSPDNKGHFGLAYEAYTHFTSPIRRYPDLLVHRGIK
AVLNGEKLPAKGLAEIGAHCSMTERRADDATRDVDAWLKTYFMQDRIGDE
YDGTVSAVTSFGMFVAIDEIFIEGLVHVSELGQDYFHYDQAKHMMLGERT
GKRYRLGDRVRIKVMRADIETSKIDFSLVETIETATQPEESVAPKKKRSK
TRGGGKKK
>Tbd_1129 GreA/GreB family elongation factor
MTKFPLTVVGAEKLRAELQHLKSVQRPAVIQAIAEARAQGDLSENAEYDA
AKEKQGFIEGRIAELEGKLSNAQIIDPTTLDADGRIVFGATVDLEDVESG
DSVTYQIVGDDEADIKQGKISVSSPIARALIGKYAGDAVDVQAPGGVRQY
EVLDVLYK
>Tbd_1419 Possible Transcriptional Regulator, TetR family
MNPETRMTAAPPIPDATRADARRSQIRAAAAECFRQHGFHGTSIAQISKA
AGMSTGHIYHYFENKEAIIAEIVAQDLERLLTLTAELRAASDVKAAMIER
AVEGVQQNLDPAHAGLQLEVVAEAARNPRIAHIVRAADRQCRESLLQTIR
TLRRAAGHQDSEATLAGMAEAISAMFEGLRIRAIRNPDIDRDVVVQMFRR
MVGDLLSQAPQPPPRGRRDT
>Tbd_1483 peptidase S24, LexA repressor
MPRCFMRLKARGLIFPSFIMRVSCDARQPGHRALAFFGLGTYTVRTYSNV
LYMHTVSGGSPMRDLTPRQEEILNLIREWIDTTGSPPTRAEIAQHFGFSS
PNAAEQHLKTLAKKGALELVSGASRGIRLPGGGGLAVVGQVAAGSPILAQ
ENIERHVQVDTALFSPRADYLLKVRGQSMKDIGILDGDLLAVHRSAEARA
GQVVVARIGDEVTVKRFQKRGHTVQLLPENADFEPIVVDLKRQELVIEGI
AVGVIRSGRSL
>Tbd_0997 helicase c2
MSDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGT
GTGKTLAYLIPALRSGGKVVISTGTKALQDQLFHRDLPAARRALKSPVKV
ALLKGRANYVCHHHLQRNLADGRFAHRDDAAWLQKIARFAEASASGDRAE
AEGIPEDATAWQYAVSTRDTCLGSECAHFKDCFVMAARKAALDAEVVVVN
HHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQFFGETLSTAQL
LDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAE
IGRHEKWPDALAGLSTALGAARKLLETQAERDADLKNCHERAEALAATLD
RWRRDDEPDAPRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILT
SATLSVGGDFSHLKTRLGIEEAETLCVDSPFDYPRQGVLYVPPNLPAPNT
PSFTEAVVDAALPVLEISQGRAFILFTSLRALEKARELLAAAFTFRGWAF
PLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGDVLSVVIIDKL
PFQPPDDPVVAARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETD
RGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFFCGA
>Tbd_1717 transcriptional regulator
MADRRLQVFYTVAKQLSFTKAADILYMTQPAVTFQVKQLEEHFNTRLFER
SHGKISLTPAGELVLGYAERILALSGEMEARVGELTGQVTGPLMIGASTT
IAEYQLPRILGEFKERFPQVQARLTVANSETVAAKVADHSLDVGLIEAPS
HNPNLTTVACCEDELVMICAPAHTLATRSNVSAREIADQRYVSREHGSGT
REVVDDFFKDHGVNPDDLHIEMELGSREAIKGAVEAGLGVAIMSASTVTK
EIQLGTLVAVPLNPRLTRELSMVYAPEKFRSKLLDAFISFVENKFQQCNI
DVAPFRRPFKGRAR
>Tbd_0838 RNA polymerase sigma-70 factor
MSREHSDESDDLTPDETEADEERHAASDSNEELASAILDEPQVDVTQLYL
NEIGQAPLLTAAEEVALARRTVLGDFEARQTMIERNLRLVVNIAKHYANR
GLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQS
RTIRLPVHIIKELNIYLRAQRHLETHGVTDATSDDIAALTGHPVADVRRI
MQLNERIASLDAPLDVDPTLSLGEAIADDNAHLPDEMLQLEEIENHVQEW
LTQLNDKQRWVIERRFGLNGCEACTLEDLALELEVTRERVRQIQMESLRV
LRQLLRRRGVTKDELF
>Tbd_2237 Two Component Transcriptional Regulator, LuxR family
MIQVAIVDDHQIVRTGFRELLGDDSAIRISFEAADGDEALAQLRTAPCDV
LLLDISLPGKSGVDVLRTIRQRHPDVKVLILSGFPEESYALAMIKNGANG
YLCKDCEQEDLLRAIHTVSNGRRYVSARTAELLAEEMSGERRGVLHEALS
DRELQVFLRLARGESVSDIASQLHLSVKTISTYRSRVTEKLNVASNAELA
TYALRHGLIAE
>Tbd_0482 Possible Transcriptional Regulator, TetR family
MYDQVMHASAKTPDLTRQTLLEAAFAEIHRNGFQAASLAQILGDTGLTKG
ALYHHFPDKKALGLAVVDEVIRPHLAAMMFAPLEETDRPLEAMQALLAAK
AAEDDPAVVALGCPLNNLMQEMSPVDEDFRLRLNRVFEAWVAVLAAALGR
GLGAGHVRADVDPAATAFFIVSALEGCVGMSKNTQSVAAYRNCLGQLAHF
LDTLKPATHAPDR
>Tbd_2307 conserved hypothetical protein-putative acetyltransferase
MREGGTYAIDPALRADEALGYWTSADKESFVAEDEGGIVGTYYLRPNQAG
GGRHVCNCGYVTRAEARGRGVARAMCEHSLAYAASRGYRAMQFNFVVSTN
THAVRLWQALGFEIVGRIPEAFCHPEHAYVDAFVMHRFL
>Tbd_2677 Possible Transcriptional Regulator
MAAQLKTALTILRRRQVEKRVGLTRSPLYARIQAGTFPKPIRLGNGRAVG
WIEAEIDAWLDEQIEKSRKA
>Tbd_1362 transcriptional regulator, TetR family
MTWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGE
LQRGGDTAPKRMVQTLIRQYGERLHRLLEAGKTQGELDPALDTEAAATLF
IGTIQGLVMQSLLAGDVAGIRRDAPRVFAIYRRGIGRTL
>Tbd_0399 RNA polymerase I subunit A
MKALLDLFKQATHEEEFDAIKIGLASPDKIRSWSYGEVKKPETINYRTFK
PERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRE
RMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEGFVVVEPG
MTPLNRGQLLTEEDYLGKLEEYGDEFKALMGAEGVRELLRSLDVASEVET
LHSEISKTGSDTKLKKLSKRLKILEGFQKSGIKPEWMILEVLPVLPPELR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYS
GRSVIVVGPTLKLHQCGLPKKMALELFKPFIFNRLEVLGLATTIKAAKKM
VEDEEPIVWDLLEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAFNADFDGDQMAVHVPLSLEAQAEARTLMLASNNVLSPANGEPII
VPSQDIVLGLYYMTREKVNAKGEGMMFADVTEARRAYDNREAELHARVTV
RIKEVTLDENKNRVETVKRVETTLGRALLSEILPPGLPFSFVDKALKKKE
ISKLINASFRRCGLRETVIFADKLMYTGFTFATRAGMSIAIKDMLIPQEK
GQILGAAEAEVKEIESQYTSGLVTQGERYNKVVDIWGRAGDAVAKAMMGQ
LGGEKVTDRQGKEVTQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLNMLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVTQDLVVTEDDCGTKNGLLVKALVEGGEVVEALRERILGRVAASDIIN
PETQETVFEAGTLLSEDVVDTIEALGIDEVRVRTPLTCETRYGLCANCYG
RDLGRGYLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQL
EAKSNGAVQYTATMRYVTNARKELVAISRSGEILIADDSGRERERHKVPY
GATLMVTDGAKIKAGAVLATWDPHTRPIITEYAGRVRFENVEEGVTVAKQ
VDDVTGLSTLVVIDPKRKSTSTKGVRPQVKLLDDAGNELKIAGTDTLVNI
TFQIGSIITVKDGQDVAVGDVLARIPQETSKTRDITGGLPRVAELFEARS
PKDAGVLAEVTGTVSFGKDTKGKQRLVITDLDGVAHEYLITKEKHVTAHD
GQIVQKGEMIVDGPVDPHDILRLQGVEALASYITDEVQDVYRLQGVKIND
KHIEVIVRQMLRRVVVADPGDTGLIPGEQVERSEVLQINDEMIAAGKEPA
VYDPILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDELRGLKEN
VIVGRLIPAGSGLAYHNTRRRQAAGEDMGADRLLEGGETPAAENQEVA
>Tbd_0348 Two component Transcriptional regulator, Winged helix family
MVDAATGERGLIEAGTRKPDLVILDLGLSDRDGVDVVRDLRNGQPSLSSS
CRPGSTKRTKWLDAGADDYLTKPFGVAELLARVRALLRRTHVTGSEGPLV
TFGEVTVDLARRQVTRSGAEVHLTPIEYRLLAVLIARAGRVITHRLLREV
WGPSHTEDTHYPRVYMTGLRRKLEENPPPPRHIRTESGLPSRRDNVRRHD
GLKRAFLFDPTCQAY
>Tbd_0037 transcription termination factor Rho
MHLSELKQKPITELLEVAAAHGIDNANRFRKQELIFTILKTLAKRGESIY
GDGVLEVLPDGFGFLRSPETSYLANTDDIYVSPSQIRRFNLHTGDKIEGE
IRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLERE
IKAEENITSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQHIAHAISSNHP
EVVLFVLLIDERPEEVTEMSRTVRGEVVASTFDEPASRHVQVAEMVIERA
KRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRF
FGAARNIEEGGSLTILATALIETGSRMDDVIYEEFKGTGNLEIHLDRKMA
EKRQYPAINVNRSGTRREELLMPHDILQKVWVLRKLLYPMDDMEAMEFLL
DKIRATKNNGEFFDSMRRG
>Tbd_1836 Sigma-24 (FecI)
MDHPRRLPSMSLMSHFLFGPFRPTLEALRPMLYRIAYAWCHDPALADDLV
QEALSKAWARRAQLREDAALKGWVVSIMNHCWVDHLRRRREFEDIEEWED
ELESAGDSPEACCDRERVVACIRSAVAQLPPAQRQVVTLVDLEEFGYAEV
AGILNIPVGTVMSRLSRARANLKKRLDAAQTAAGPSLWRVK
>Tbd_2275 hypothetical protein
MELKDYQARVLADLAGYLDVLDGTPNLAQAFRDYWAGKGVRVGGDDGIEP
YKNTVPGVPHICAKVPTAGGKTFIAVNALDTVFTALAKRSPRRPKMVVWL
VPSLTILDQTVKALNSPEHPYRKRLDQLFRHRVAVYEKRDLLMGAGFSYD
TAQEQLSIVVMSFDSLRARNKEDRKIYQENGNLASFLQPDQGDPGDWLLP
EHDASALINVIRRLRPVVVVDESHNAESQLSVEMTTNLNPDFILDLTATP
RNNSNIISFVDALALKKQHMVKLPVIVANRTSKGEVIESALILRRQLEDL
AKQEEAAGGKYIRPIVLFQAQPRTDEDNTTFEKIREKLIELKIPAEQIKI
KTADINELKDVDLMKRDCPVRFIITVNALKEGWDCPFAYILASLADKTSA
VDVEQILGRVLRMPHVQQHGHDLLNLAYVFTASNRFMDTLQSVVKGLNRA
GFSDKDYRAIDAQAADTAAQAGAAGTEQLPLGGLFGQATADAEAEPVGEL
DVSGVSPDWEAAAATTAQAGTGARESGATTPDVTPASAAFVADIKARALA
ENQAFEEKAQAGNDDVSPELEDKMNRHKIKDIFRDEALAVRLPQFFIQVQ
NGGFFTEEQPFQLFEREELLKDFRLSQGDATISFEDVETEIYRVDLEQLG
DENYAPRAFKLAARERVQFTNYLLALSHESQMMNLVSRLTELVGNMYPIT
DPEVKEYIRRVVTGMNAEQIRDCIERDVAYVRKIKQKITALANAHAQKTF
TDMLDVDRIAMQPSFALPDSITPSANASAVPKSLYVTEAAMGDFERRVIN
DVANLGSVQWWHRNGSRGKGFRINGFLNHYPDFIVKTKPGRIILLETKGD
DRDNTDSELKLKLGKLWEAKAGRGYRYMMVFEHNPIDGAERLADALVKLR
QL
>Tbd_0050 Transcriptional Regulator, IclR family
MKKVQSSIQVLDRAMGLIGALASGRGPTALTRLAEQAELHTSSAHRILAA
LAAHGLVEKTGAGEYELGVRWLEVGNRLRARLNIRQVALPFMQRLAETTG
ETVNLIVRRGDEAVYVERVSGGQTLIQVVQVVGAHAPLHVTAVGKIFLAE
DSASGVMGYAERTRLPAYTPNTLVTLEKLRRELDVIRAEQLALDREEAEL
GVACIGAPIRDAEGKLVAGLSISAPADRHKPEWAALLGTAAAGIGASLGY
DAGTERR
>Tbd_0855 Possible Cold-shock DNA-binding domain protein
MATGTVKWFSDAKGFGFITPDDGGEDVFAHFSAIQTNGFKTLKEGQKVSF
EVSQGPKGKQASNIQPQG
>Tbd_1700 Serine/Threonine protein kinase
MNIGRYEIIDGIGQGAMGTVYRARDPLIERTVAIKTVPIAQLQAEGADAE
SRFLREAQSAGRLSHPNIVTIYDVGEADGIAYIAMEYLPGATLRDLMNKG
PMPLDLVLDTALQMLEALAFAHEHGVIHRDIKPANVVVVGHRGRIKLTDF
GIAHLANSGQTQLGQMLGSPRYMSPEQAMGREVNGRSDIFSLGAVLYEML
TGRYAFDGDSLPTIVYRVIHDPPAPIASLRPQIPPALVTLVGQMLNKNPA
ARPDARTLVSAFHGLMPTVPQRLQAACGKDVSPVLRVLAFTAPIGVFLLI
GVSVIVIERFLGLPGTSGPPQARAPAAAQVASVGPPPPALPELAPNDRAA
PPDRATDENGASAPATDAYLEGLDRKRVELRIKRAELLLKYTRQHPDVVQ
IDAQLDRLRAERNRHLRQLQKQAAD
>Tbd_2285 Possible Transcriptional Regulator, Fis family
MAALERIHLEIVRAVDQHGSLTAAAETLHLTQSALSHAVRKLEDQLGLAV
WHREGRSLRSTQAGAYLLSIANRLLPQLERAEAQLDQFARGERGTLRIGM
ECHPCYAWLLKIVSPYLAAWPAVDVDVKQKFQFGGVGALFAYEIDLLVTP
DPFDAPGLRFEPVFDYEQVLVVGPGHPLRRAAYVRPQQLADETLITYPVE
TDRLDIYTRFLTPAGVSPRRHKTIETTDIMLQMVASGRGVAALPRWLVEA
QADSFDVAAVRLGRRGMAKQIFVGLREADVEIDYLRAFVELARGRATRSG
RGKERARGS
>Tbd_1014 Transcriptional Regulator, MerR family
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRR
GNRRYYQHHEVLLIRRIRELLYEEGFTISGARQRLEHDADSAPSPAPAGA
TTGLDVGELRSELAAILKILG
>Tbd_2323 oxidative stress transcriptional regulator
MTLQELRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDR
SLKRVTPTPIGREILQAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPT
LGPYYLPHALTLVHRKHPGLRLLLREEMTPQILEHLADGKLDAGLLALPV
TDEGLRVEPLFHEPFYAALPADHALAAREALSVADIMAEKLLLLDEGHCL
REQALDVCGARSSGREEVRATSLETLRQMVGMGLGLTLLPALAVDAAPRQ
TRKLVEIRPFRSPPPGRTIGLVWRRRAPFPETFERLAATLKASLPAGVEA
V
>Tbd_2216 ROK family protein
MAPSLRFGIDLGGSKIELIALDRDGREILRRRVPTPQGDYPATVAAIAAL
VGHAESGLGQQGSVGVGTPGAVSPASGRMKNCNSTCLNGQPLREDLERAL
GREVRVANDANCLALSEATDGSAAGAESVFGVILGTGVGGGVVVHGRLLQ
GANAIAGEWGHSPLPYFQFAGAQADRAMTGHHPATGEAIVHPWPQPRELD
AAPACYCGKKGCIETWLSGPGLAADHVRYGGEDLPAHEIVQLANAGYGPC
SATLARYEERLARALAGVINLVDPDVIVLGGGLSNIARLYDTVPRLWPRY
VFSDRVDTKFVPPKYGDSSGVRGAAWLWE
>Tbd_1163 Iron-sulphur cluster assembly transcription factor IscR
MRLTTKGRFAVTAMLDLALRGGKNPVTLAGISERQDISLSYLEQLFSRLR
RHALVESVRGPGGGYYLAKPLADVSVADIIRAVDEPIDATQCGGKENCHD
EHRCLTHDLWVGLNSHIYDYLDNVTLASLVAKQDECKEKVLQDRRASKMT
LAV
>Tbd_2681 Predicted transcriptional regulator
MTAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIA
LGIVREEMALFPAYEVEGITHPDKLSADIANQCRDMFNIPLRVDIATENV
HGKNVVVVFVPEAQPQDKPIFFKAQGLPRGAFRRIGSTDQRCTDDDMAVF
YQGRQQESFDAGIVADATQDDLSPEAIADYRKSRGDANPDAEELRWSDEE
LLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTRVDYIRVPGRE
WVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKP
VIPLRVIREALVNALMHRSYRSHSPVQIIRYANRLEIRNPGFSLKSPEHL
GEPGSQPRNPKIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDR
GADQFVARYFFHHFLGEDDIAWLAQFRDLHLSDEEAKALIVVREAGAIDN
ATYRELNKVDALAASGALRRLRDAGLLAQKGRGSATYYVPTDRLGADGDG
LPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETARRALLAELPG
DLAARVGALGRRSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNT
YLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE
>Tbd_1758 GTP diphosphokinase, RelA/SpoT protein
MNEIVRPRCYEATDRESARQALARVLPVAENDLPWRALDYAYERLGGSEA
FAHSVGSALIAAELKVGADAVAAALLHACLGDEAEMDERFNSAAQLARGV
AAMARIESLAATTTDKRIDPHAQLEALRQMVLAMVEDIRVVLLKLAERTH
ALRCAASPAPEGDDPDERAALREALGQQARELFAPLANRLGVWQIKWEME
DWAFRYLEPETYRTIAAQLDEKRADREAYILGIIERLKAELALHGIEAEV
TGRPKHIASIVNKMRRKHLSFEQLYDIRAVRVLVRQEIDCYTVLGLVHNL
WQPIPGEFDDYISQPKSNDYRSLHTAVIGPEDRALEVQIRTFDMHRHAEL
GVAAHWRYKESGKQDAQYEEKIAWLRRILEWKDDVADSSEFREQFKTELF
HDQVYVLTPQGRVVALDRGATPVDFAYAVHTDLGHRCRGAKVNGAMVPLN
TVLDNSQRVEIVTAKEGTPSRDWLNPALGYLATHRARSKVRAWFRQRDVG
EQVNLGRSLLDKELKRLGVGDVNHEKLAQRLKFSSVDEFFAALGRGDVGQ
RDLVGALQEPGKAPPALAPTAKPRSRPGSGSPVVIPGLGDVPLTMARCCK
PRPPEAIVAYTTVGRGVTVHRADCASLRRANQARQMPAEWALDLGTGFEV
DIRLKAFDRQGLLRDVSDVIAKDKLDVLRVNTETRGEYAQMQLTVRIKEL
QQLSRLLARLQHVQNVVEVRRS
>Tbd_0231 Response regulator receiver domain protein (CheY)
MNGPNPPLRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALA
LAQQTAVDAVLLDIRMPVMDGLECAAHLNRLAAPPAIIFSTAYDAYACQA
FDLNAVDYLLKPVRAERLVRALSRAHRLSAKTLDQLREAHPKARTHLSLN
EKGRIVLIPVADILYLKAELKYVTVRTAAREFLIEESLTQLEAEFGERFL
RIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSRRQYTALRET
LRAF
>Tbd_2815 DEAD/DEAH box helicase
MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSG
KTAAFLLPSIQRLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEM
RRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLE
VLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLAREL
TRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDALLRDVEMVQAIV
FASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLV
ATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAG
MREGGLVKNIERYTGNRIEVHTLPGLEPTQRPSTGRPGNGRPRGNGPRGG
YEKRSFGDRSEPRSYGDRPRGDSRDNRDRGYRGDARRNDGAPARRFDNGV
RGPSDVPRMTSEQTAGPRGAASKPEVNGNSVEYWEKREREAKAKAATGRS
YGDRGNAARPARGYGNENRGGAGRGGVRGRFKD
>Tbd_2395 Putative Transcriptional Regulator, ArsR family
MNMAAEWDEVDLLDKDEHIEQASRAMKAMSHPLRLKILCVLGDKEVSVQD
IVDHVGTSQSNISQHLAILRDKGVLRTRKDANRVFYRVGDTRTLKLLGMM
RDVFCGFTK
>Tbd_1656 transcription-repair coupling factor
MALLFHDPALAVRRASGLAGAADALYLAEAARSVAPLVIVCASAWDANRL
TEELRWFDPALRVCAFPDWETLPYDNFSPHPDLLSERLATLYQISRGEFD
LAVVALSTALHRLAPPSFLAAHTFFLKQKDRLDEAAFRAQMTLGGYSNVN
QVFAPGEFSVRGGLIDLFPMGSAVPYRIDLFDNEIETLRAFDVDTQRSIY
PVNEVRLLPAREFPLDEAGVTRFRQNFRERFEGDPSKSKLYQDVSNGLAP
AGIEYYLPLFFDATATLFDYLPQPTRLVAHGALDAAGQAFWSEAQGRHRL
LAGDKDRPLLPPADLFLATDAFFSRAKSYERFDVAQAGDGLARPLPPISV
DRREAHPVAKLRSFIDGFRGKTLIVAPSAGRRETLHEYLAEHGLDATPCD
GWAGCEAGRERILLTHGPLAEGFVTHDEALAVITETELYAIPPKTRRARE
ARATQIDSLLRDLSELKPGDPVVHAQYGVGQYLGLATMDLGDGDTEFLQL
EYAKGDKLYVPVANLHLISRYSGASEGEVPLHRLGTDQWEKARRRAMQAA
RDTAAELLNLYALRAAREGHAFSFSLHDYEAFAEGFGYEETPDQAAAIAA
VMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLL
AEQHFNNFSDRFSQWPVKLAELSRFRTAKEQAAALEALKDGRIDIVIGTH
RLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPR
TLAMSLEGIRDFSVIATAPQKRLAVKTFVRSFSGGLIREAVLRELKRGGQ
VYFLHNEVSTIQNMRERLEKLLPEARIRVGHGQMSERELEQVMRDFYQQR
YDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAF
AYLLVEEDRTLTPQAKKRLEAIQLMEELGSGFHLARHDLEIRGAGEVLGE
KQSGEILEVGFSLYNDMLAGAVASLKAGKEPDMSQPLDVVSEINLHLPAL
LPADYCPDVHERLVLYKRLASCQTPDDLTAMQEELVDRFGELPDTTRALL
AVHRLRMATRAYGIARLDVSGEGMSVQFVPSPPVDPGRIIALIQGKAGYK
LAGPDRLKLSVSLPDLARRVGAVNAFLAALGPPVGDSLSSATHHSS
>Tbd_2014 Protein of unknown function UPF0074
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGL
SGLVDTLRGRNGGLRLKREPTEITVGEVVRSTETDFDMAECFDPSGDRCL
YSPACVLKDVLSSATLAYLGVLDKVTLGDLVGGGRGRKKTAPIQVYPAAK
KPKVAA
>Tbd_1255 Possible Transcriptional Regulator, TetR family
MNIATDTRSRIIAAAKPRFHSRSYANVGIQEICEGAGVQKGSFYHFFPSK
RDLVLAVIDEFADEWAHGFVAEAFDPALPPMERIDYLVDAAYFWQKSIKQ
VHGRMLGCIFGNLTLEVSTQDDILRAKLLAIFSRAKSRFKETLEQAAAAG
AIAPLDADRTAEAMLAYLEGVILLAKSQNDPEVIHRLGPAIKTLRVETAA
>Tbd_1942 Serine/Threonine protein kinase
MSGTAGRAEAGPAPLAGPAMRGELEVSAGQYSDRGRKEINQDFHGIRIPE
ATQRRAKGVVVALADGISSSTVGHVAAQAAVAGFLEDYFCTPDAWSVKTS
AQRVLTALNAWLHAQSQRSPYRYERDRGYVCTLSALVVKSATAHLFHVGD
TRIYRLRDGTLEQLTNDHRLRLADDVHYLGRALGINAQLEIDYRAEALEA
GDVFVLATDGVYEHVAAGFVADAVATHGDDLDRAAAAIAGQAYAQGSADN
LTVQILRIDRLPNAGARELRNQLAARPLPPILQGRMRFDGYTIVREVHGS
SRSHVYLAVDEESGARVILKAPSIELQGEAGYLERFLMEEWVARRVDSAH
VLKPSPVRRKPGYLYTAMEFVEGQTLGQWMIDHPRPDLETVRGIVEQIAR
GLRAFHRLEMLHQDLRPENIMIEPNGTVKIIDFGSTEVAGMRETDPLAGR
GIELGTLQYTAPERLLGDGGTRAADLFALGVITYQMLSGELPYDTQVARY
RTRADQRRLRYRSLRDGRRAIPPWVDDAIRKAVHPEPERRYENLSEFTFD
LRHPSPSRPASPLIERHPLAFWQGLSLVLALVVVALAAALHATRLPATSA
EPSAERGAAFVSSQPSERRSR
>Tbd_1290 Two Component Transcriptional Regulator, LuxR family
MIRVLIADDHAVVRQGLRHVLSASPDIVVAAEAADGFEVLEKIRKEAFDL
VCLDLSMPNLSGIDLIKRIRLDCTTLPILVLSMHNEAQFAARALKAGAAG
YLTKDSDPETLIGAIRKVASGRKFIDPTLVDELIFEKILTDERAPHEQLS
DREFQIVRLIAQGESLNQIADKLSLSAKTISTYKARSMQKLGISNHTELV
RYAIAHHWI
>Tbd_2670 Metal dependent phosphohydrolase, HD region
MIVDDRGTARSLLEGLARTLEPGVIVQSYADPFEALAQMQLATPDLIITD
YRMPGMDGIEFTRRIRAERRLTDVPVVIVTVVEDRQIRYQALENGATDFL
TRPIDPQECRARCLNLLALRRSQKAIADRAMWLEEQVMQATREVRTRERE
TLMKLAKAGEYRDQETGNHIVRMAKYARLIAEELKLSAMECDEIEAAAPM
HDIGKIGIPDVILLKPGRHTPDEQQIMRRHPQLGHEILAGSPSRYLQMGA
IIALGHHEKFDGTGYPQGLAGEDIPLPARIVAVADVFDALTSDRPYKRAW
SFQDALQFIRSESGRHFDPACVRAFERRIDAVAAIARELSDPQS
>Tbd_0813 putative acetyltransferase
MLEVVRARYRDPVHAAALIALLDGYSRDPAGGGKPLSDFARTHLVDALAA
RPHVFSVLAFDDDLPVGLVTAIEGFSTFACRPLVNVHDVVVHREHRGRGI
ATAMFAAVEAIARECGACKLTLEVLSGNAPARALYEKLGFDDYRLDPALG
KARFMQKWLDD
>Tbd_1559 Transcriptional antiterminator, Rof
MSETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAE
WLRAETDGGEALTLRLDRLVLAEDA
>Tbd_2690 Two Component Transcriptional Regulator, Fis family
MNSVMRLLIVEDDVDFATALARAMKKRGFEVALAHDAVEAARIAAQFVPS
HAVVDLKLPGKSGLDVVATLAARVPAPAIVVLTGYASIATAVAAVRLGAR
HYLAKPADADEIVAALLRDEPDTTVDVSPQPLSVARLEWEHIQKVLNEHD
GNISATARALKMHRRTLQRKLEKNPPRTG
>Tbd_1736 Putative Transcriptional Regulator, ArsR family
MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPG
GLPAGRVSELTGIAPSSLSFHLKELSHAGLAASRQDGRFVIYTARYETME
ALLAYLTAHCCSGEACLPGLAAAAVAPPQMA
>Tbd_0670 Two Component Transcriptional Regulator, LuxR family
MDDHGFLATADGQAPRVARIFVLANPDFYLDGLLAVLARSAHIQIVACVK
PGADCWNAFVAAEADVLLIHRQAVLDVPGGFSRHVQHAPNLKVIVFGHDM
PDEFLLKIIRSGAAGYINERMSGEHLLTAVQKVLEGELWVERRILQRLIL
RVVELEDIINQAIESIRNVLTKRESEIFRHVLGGLSTKEIAGEMQVSEQS
VKLHLGNIFKKFDVSNKQQLILLTFQRVCPVSNVLRLFQIVMDKHQLAQG
KPPLIEDPLWRDGNG
>Tbd_2786 Two Component Transcriptional Regulator, LuxR family
MTAPLNIILIDDHPLLRMGVAGYIQQEPDLELTAQFANAAELRAWMAAGN
RADAALLDRSLPDADGLDLVSDLRDLGIKVIMLTIADSDEEISEAIASGV
DGYVVKSSEPDQVLAAIRSVCDGQSSFPLNIMQKMARGELNNSALSALTA
REMEIVDHVKEGLSNKAIAYKMTLSENTVRNHLRNIMEKLGLRNRVQVAT
LALKEDRKRH
>Tbd_2196 conserved hypothetical protein
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATK
DLKLYSDLAPGNLAYNHGVFGFVPAHGFAAAFADLSPARALPVIAANLAV
ANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSL
SGRDNQEPRLLEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLD
APAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYGASGEVIEVTV
RRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
>Tbd_0520 GreA/GreB family elongation factor
MNKAFVKETDADDADDGAEIAAPALPAGAKNYMTPAGYARLDAEFNQLWK
VERPKLVETISWAASNGDRSENGDYIYGKKRLREVDRRIRFLSKRLEHAE
VVDPATRAATDQVFFGATVTVADADGSESTYAIVGLDEADASRGRIAWMS
PMARALLKAREGDTVVVQTPDGRREVEIIEVRYVALE
>Tbd_1077 Predicted transcriptional regulator
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERV
VGFGEQEEANAIVSTLLEETQPAVENVSIEFLDTDGKGLVLHIGIPKSPK
VHYTASGDCFIRINAQKRKIKGERITQLGYSKGAEPYERKPVADVELQEI
AQSEELADYMRRVSTHLEPTIFLRKQRLLTSHDGTRIPNVGCVLLFDEEP
QATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEEVIRKTIDQVV
KYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDN
RIEVQSPGKLPGYMSLDNLYEERFSRNPNLVRMLHNLPNPVNHDIGEGLD
TAKNELKKAGLVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTE
ITNKLVRQLSGEDDMQKVKLALQKLRAAGHIVPLDENASAFNFRYVKA
>Tbd_0698 NusA antitermination factor
MSREMLMLADALAREKNVDKEVVFEALEQALASATKKRFKEESDVRVAID
RETGDYESFRRWLVVTEAELESEGYQILLVDAQDKIPDIEIGDYIEEPLE
NVEFGRIGAQAAKQVILQKIRDAEREQIISDFLARKEHLVNGVVKRIDRG
NAIIESGRVEGFLHRDQMIPRENLRVGDRVRAYLLRIDRGNRGPQVVLSR
TAPEFIMKLFELEVPEIEEGLLEIKAAARDPGLRAKIAVVSHDPRIDPIG
TCIGLRGSRVTSVTNELAGERVDIIHWSADPAQYVINALAPAEVSSIVVD
EDTHSMDVVVDEEQLAMAIGRGGQNVRLASELTGWELNIMSREAAEEKQS
SESQKTLQLFIEKLDVDEEVAQILVDEGFSTLEEVAYVPLNEMLEIEAFD
EALVNELRNRARNALLTAAIVGEEQVEASAGDLLSLDGMDAETARLLASK
GVHTTEDLAELAVDELTEMAAMDAERAKQLIMAARAPWFAQG
>Tbd_2805 chromosome partitioning protein ParB
MAKLKGLGRGLDALLAGEDNAAPPQGDLRMMAVSHLAPGKYQPRSQMDSE
SLQELADSIRAQGLMQPILVREVTGGYEIIAGERRWRAAQLAGLAEVPVL
LREVPDNAVAAMALIENIQREDLNAIDEAHGLQRLIQEFGMTHDAVAQAV
GKSRAAVSNLLRLLNLSRPVQDMLVAGLIEMGHARALLPLHAGAQRELAH
EIETRGLSVREVERRVARLKDADAAPPAKPRVSRDTLRLEEALSDALAMT
ARVQADRKGGGKLTLQFGSFDALQGLLQRLGIEL
>Tbd_1338 Transcriptional Regulator, MerR family
MESNLGNLSIGAFAKAVGVNVETIRFYQRRGLLPEPDKPYGSIRRYTTSD
VSRMQFIKAAQRLGFSLDEIAELLELEDGSHCSEARAQAERKLVDVRARL
ADLRRIERVLADLIQRCCAISGDVRCPLIASLKGS
>Tbd_2524 conserved hypothetical protein
MSKTPFEVSRLAEADVDAVQSLARTVWQATYPALISQAQIDTMLAARYAA
PSVREQLESPRDAWWVARQDGRVVAFAHAQATPPDCKLDKLYVDPTRQRS
GIGAALMDTVVAWARTQQATRLWLQVNRGNAQAIRAYEKYGFRIVEARVF
DIGQGFVMDDYILEKAL
>Tbd_1733 DEAD/DEAH box helicase
MTVETTFASLALAEPILRAIADAGYTAPTPIQAQAIPHVLAGGDLLAAAQ
TGTGKTAGFTLPILHQLSTRAAVAPKPGRPRCLILVPTRELAAQVEESVK
TYGKYLSLTSMVMFGGVNINPQFKALKARVDILVATPGRLLDHVAQKTVD
LSGVEILVLDEADRMLDMGFIRDIRRVLAVLPKQRQNLLFSATFSDEIRT
LANGLLNNPKSVEVARRNTTAEVVEQSMHRVPQAHKRDLLAHLIKHHDWQ
QVLVFTRTKHGANKLAEKLNKDGITAAAIHGNKSQSARTKALASFKDGSV
RALVATDIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGSAL
SLVDDEEMGYLRDIEKLIKRAIVRVEIEPGFVPPAKADLMSDERPPRPPQ
GRGASRAGQNGGPRQGQGGRGGQGSGRNANRPAQGKSAAAPVKPASGRAA
APNSPAQPRKPRPQAALFSAKPGSRGH
>Tbd_1351 transcriptional regulator
MIEKHRRKKQPRRHPHFVWADPERFHVERRTAGLTQKQAAEYLGVSLRTV
RNWETGCNRIPYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAF
QPWEIQQLRLVVGLARRYVEGRYVAPAAPAALPAFAEKVPVLRRVA
>Tbd_1654 Sigma-24 (FecI)
MRARSDLIEHLPRLRRYARALTGDASRADDLVQDTMERALVKLDLWKPGT
DLRAWLFTVMHNLYVNQARSLRPPGPAIEDLPDKPVSGGQMEALTARDIR
DALAKLPEEQRAVLLLVGLEQFSYAEAARVIGVPTGTVMSRLARARERMR
RMLTGEPVVNLKAVK
>Tbd_0933 DEAD/DEAH box helicase
MESLASTLVDSQVDLNPHQVEAALFACRNPLSRGVILADEVGLGKTIEAG
LVISQRWAERRRKVLIIVPANLRKQWHQELQDKFGLQGLILEAKSYNAIR
KQEQRNPFLFASGPIICSYQFAKAKADDVKGIDWDLVVLDEAHRLRNVYK
TSNVIAKTLKEALSRVHSKALLTATPLQNSLLELYGLVSFIDDRVFGDLD
SFRSQFTGREQSFSSLRDRLAPICKRTLRKQVQPYVSYTARKAIVEEFTP
SSEEQELSRLVADYLRRPNLKALPEGQRQLISLVLWKLLASSTHAIAGAL
ETMAKRLQGVLNETPVVADLAEELDEDYESLDETAEEWEDQEQGTKAASR
AERDAIAQEIEELRHFRTLATNIRDNAKGKALLTALDRAFAELDRLGAAR
KAIIFTESKRTQEYLLNLLADTPYGDGIVLFNGTNSDQRAQAIYKDWLKR
HEGTDRITGSKTADTRAALVEHFKERGKVMIATEAGAEGINLQFCSLVIN
YDLPWNPQRIEQRIGRCHRYGQKHDVVVVNFVDRSNEADARVYELLSQKF
QLFEGVFGASDEVLGAIGSGVDFERRIAEIYQNCREPEEIKSSFEQLQLD
LSGEINEAMVKTRQVLLENFDEEVQEKLRMRADDSRNARNRFERMLMDLT
RAELVHCAAFDDDGFDLRHIPTGVEHSGLTGIELGRYELPRRSGDAHLYR
INHPLARWGIEQAKARALNGARLVFDYNAHGAKISTLEAWRGKAGWLTVK
LISVETLGNQEQHLLVAAGTTDGVVLAEEDPEKLLRLPATTQAANLFNAP
DATLLADVEARKTALLRDVNERNLGYFEQEVQKLDAWADDLKLGLEQEIK
EIDREIKEVRRTAATSPTLEEKLSWQKKQRELEGKRSKLRRELFARQDEV
EAQRNDLISQLEAQLQQQVEERTLFTVEWELV
>Tbd_1116 transcriptional regulatory protein, LysR family
MDRLAHMQMFVAVVEAGSITAAAERMNLAKSAVSRRLAELEAGLGVSLIQ
RTTRRLNLTESGRTYYARCVAILADVEDAEAEVSQGHGALRGRLKVALPQ
AFGLLHLAPLIQTFMKRHPDVRLELDFNDRQVDLMQEGFDLAIRIATLAD
STLIARRLAAIPHRVVASPGYLARRGTPRAAADLTQHDCLAYSNVRDPGL
WSYRDPGGEPGQVRVVVRLAASSGEFLLQAAIADEGLVLLPAFYLHAALR
SGQLSEVLADHRWPEPAAYAVYPPTRHLSARAHAFIDFLAGHLGGAGEPP
AGDEVAPTLAPNTSAG
>Tbd_2739 transcription regulatory protein, ArsR family
MQKRELKNLLYEQVARIGRAVSSPKRLELLEILAQGEKTVEVLASEAAID
VKLASAHLKVLKEARLVETRREGRFVAYRLSGDDVSALWVDLRTVAEEHL
VELKVEMERIFAAPEKLDVETRRSLLAKARRGDVVVIDVRPAAEYATGHL
PFARSMPLEEIRQRLKELPADRDIVAYCRGPFCMMSAEAVALLKEHGYRA
HKIADGVPEWQAAGLPLAES
>Tbd_1257 Predicted transcriptional regulator
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALD
ELRAAWHGRGVELIQVADGWRFQTRAEMQPWLSRLKNEKPPRYSRAVLET
LAIIAYRQPVTRGDIEDVRGVAVNPNIIKALEERGWIEAIGHRDVPGRPA
LFGTTGHFLSDLGLRTLSELPPLEELGTLVTPDETALIPELREELQDNDA
APAFGAVIETAAPAGAVTENI
>Tbd_2791 Two component Transcriptional regulator, Winged helix family
MRVLLIEDDDLIAHGVQAGLGARGLTVDRVETAAQARTMLATVHYQLAIL
DLGLPDEDGMSLLQRWRAAGVDLPVLVLTARDAVEDRVAGLRAGADDYLL
KPFDLDELLARLQALLRRAAGRSADVVEHGALRLDLERGDVSLNGRPVVL
TRRELALLAALLHARGRILSADQLKDSLYGFSEEIESNALSVHIHHLRRK
LGADLIETVRGLGYRFNMSDA
>Tbd_0475 Serine/Threonine protein kinase
MATQPNQALPNGYRLNEYTIIRKIGGGGFSMVYLARDDANQSVAIKEYLP
GALVLRTEGSVVVQASSTENNNIFRHGMKCFFEEGRALARIDHPNVVRVV
NFFRANDTVYMVMRFERGKTLQQHIQANRGSIRESFIRRVFAQLLNGLRE
VHTHKLLHLDLKPSNLYIRLDGSPVLIDFGAARQTLTQEESKLQPMYTPG
FAAPEQYHNRERLGPWTDIYSVGASLYASLAGYPPQAADARLLNDKLVPA
TVNWRGAYSDQLLETIDSCLKLNYMERPQSVFSLQKVLMDRSAMMPPRSS
LLSSLRRQLNRELF
>Tbd_0430 DNA-directed RNA polymerase, alpha subunit
MQSATEFLKPRIVEVDRASPLHAKVIMEPFERGYGHTLGNALRRILLSSM
VGYAPTEVAISGVVHEYSTIEGVQEDVVDILLNLKGIAFKMHGKAEAILK
VSKSGEGVVTAGDIEVGHDIEVLNPDHVIAHLTKGGKLDMEIKIEAGRGY
QPATARKVSEETRAVGSILVDASFSPVRRVAYAVESARVEQRTDLDRLVI
DIETNGVVEPEEAVRTAARILVSQLSVFADLEGTPAESESPRSPQVDPLL
LRPVDDLELTVRSANCLKAENIYFIGDLIQRSETELLRTPNLGRKSLNEI
KDVLASKGLSLGMKLENWPPAGLERP
>Tbd_1658 Putative Anti-Sigma-28 factor, FlgM
MKIDKRITPPAAAKVSSTKGKGAGKTPSAPAGGGDSLTLTESSSRIRSLE
SQLASVDVTDAGKVESVKAALANGTFAVDAEVVADRLIDHTKETLRKRPR
KK
>Tbd_2736 rhodanese-like protein
MSPSMTPKKKLFEQFARVAKSLASSNRLELLEALAQGERSVDALAQATGM
SVANTSHHLQILRDSGLAESRKEGLQVIYRLSDDQIPVLLGSISRIAEKH
LAEVDRIVREHFDVRDTLTPVGRSELLARVKDGGAMVIDVRPAAEYQAGH
IPGAVNIPIDELPHHLEALPQGQEIVAYCRGPYCMLAFDAVATLRQAGYQ
ARRLEDGFPEWKAESFPVDTGTPDAEP
>Tbd_1639 Putative Anti-Sigma-28 factor, FlgM
MKIDPGAQPIPLPSIDNRPAQARANGHASTAPQTDVTLSPQATQLKQLES
QLAAIPVVDRARVDSIKQAIASGQYTIDTANIAEGLLDSVKEMLRAAK
>Tbd_1516 hypothetical protein
MSEPSERKTIPIQDINEASKCAGSEPYALMVLGDSMMPEFEEGEIIVVEP
SGLVKDGSYVVAYVNDEYIFRQIVKRDDGWMLKPVNPLYENIPVDDLDVA
KGVVIMKKKPGRRSEQKRYI
>Tbd_2192 NusB antitermination factor
MAGSRKVAREFTLQGIYAWMIGGADVTLIAANLKEDEQFKRADEAYFRTL
LYGVLKEEDMLSSRIAPLLDRAVAELSPIERSILLIGAYELLHCPDVPWR
VAINESVELAKKFGGTDGHKYINGVLDKLAQDVRAVEIEHAKKRD
>Tbd_1588 Two Component Transcriptional Regulator, LuxR family
MSAAKPYRILIVDDHAIVREGLKQILAEVDDVKVGGEADCSSGALRMARQ
EAWDLVLMDISMPDRGGLETLELLKKEHPGIKVLMLSMHRETQFAVRALK
SGAAGYLNKQSAPAELLDAIRLVASGKKYISSEVAQELASQVSGERDGLP
HESLSNREYQTLCMIASGLTVSGIADKLALSVKTVSMYRGRVLAKMQLKN
NAELTHYAIKHGLLD
>Tbd_0336 Protein of unknown function UPF0074
MILSRTSQYAVQALIYMATQPDATPVLNKDIAAKLGVPAPYLAKILQSLA
KGNLLFSFRGRLGGFCLREGGEKITLMQIFLLTEGPAFTQSCLLGLKKCS
DETACPLHFRWVPVKKKIIDLLHETTLDKLAKAVESGKYRLADVPGLLFE
QVKA
>Tbd_2301 Transcriptional Regulator, GntR family
MSLVALQRNGGEAIYSQIAKLLKGEIASFLSPGACLPSENELAERFGVNR
HTIRRAVEDLIAAGLLERRHGKGTFVLDAPADYVLGSGTRFTETFESLGK
TASSRVLRKLVIPARGGVATRLRLAENDPVVWIESLRLADDRAICVISHF
LPRQAFPDVLADYPGGSLHEHLAVRHGLKLRRIESLVSAALPQGDDASLL
GMAQNQPVLRVKSVNVDERDGTPLEYALTRFRADRIQLRINP
>Tbd_2611 Two component Transcriptional regulator, Winged helix family
MDTGTPLHILVIEDNPDLAANVCDFLEAKGHVADAAGDGLTGLHLAVTKN
YDAIVLDIVLPGIDGLTVCKKFRDEAKRNTPILMLTARDALDDRVVGLEC
GADDYVLKPFALRELEARLKALVRRAKRDVSAGVLQVEDLEFDPALFKAR
RGTRTLNLSPIPLKLLEILMRASPKVMRREELERAVWGDAPPDSDALRSH
MHTLRAAVDGAGERPLVHNLRGIGYRIAPADAL
>Tbd_1945 conserved hypothetical protein
MLPPIAHRLAAEVAATPAQVAAAIALLDEGATVPFIARYRKEATGGLDDA
QLRLLEDRLRYLRELEARRAAIIDSVNEQGKMTPELLSALSLAADKTQLE
DLYLPYKPKRRTKAQIAQEAGLAPLADALLANPLLDPEHEAGAYLREPFA
TDAGENPGVPDTKAALDGARQILMERFAEDATLLQDLRDYLLEHGVVESK
LREGKASAAEKYADYFDYAEALAAIPSHRALALLRGRREDLLDVRLRLDS
EEERPAWSAPHNPCEARIARRFGIADQNRPADRWLMDTVRFTWRVKSFMH
LELELMGALRSRAEAEAIKVFARNLKDLLLAAPGGPHVTMGLDPGVRTGV
KVAVVDETGKVVDTAVIYPHAPKNDWDGSLHALGKLAEKHHVTLIAIGNG
TASRETDKLARELITLRPELGLTSIVVSEAGASVYSASAYASQELPELDV
SLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQFDLARALDAVVE
DCVNAVGVDVNTASAPLLARVSGLGTSVAHAIVAHRDAKGRFATRGQLRE
VPRLGEKTFEQAAGFLRIVGGDDPLDASAVHPESYPLVQRILADIKQELK
AVIGNVQVLKTLSAAKYADEKFGMPTISDILRELEKPGRDPRPEFATAAF
RDGIETLADLKPEMVLEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSFV
KDPHTVVKAGQIVKVKVLEVDEKRKRIALTMRLGDAAAGNTARHETRQTR
HEAGQARRGLGQAPREARPAPGKGSGGKPNRPTAAAPAGAMAAAFAKLKR
>Tbd_0461 Putative transcriptional acitvator, Baf
MSGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECF
IASVASRVYEEKLAALLTAAGCSAVWLKSEAAFDDVTNDYRDPTQLGVDR
WMGLVAARARRRAPTLVVSAGTAMTVDALSGDGSFLGGLIVPGVALMQRS
LQQGTAGGAAAGGAWQAFPRCTADAAYSGIIAALCGAVEGQHVRLAAHEG
ISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARAGGRG
>Tbd_0816 conserved hypothetical protein
MNMAQVAVALAKLAGIRKALDLALNDDHKKAGRLPIQNFLIEEVGRYFTG
AATQLSILKKELPDLFGDFVEMPVEPKTEMAKTSTEGAAQYRYARSQLEV
LARDIDQIFELRANSELAPPLIAAATTRRVFISHGRAPDWREVQAYVEKD
IGLPTLELAQEPNQGRTILAKLMEASGQCDSAVIVMTGDDLDAAGQARAR
ENVIHEIGFFQGKYGLGRVCLLHEEGVSIPSNIHGLVYTPFPKGMVSACF
GVLTRELKAFY
>Tbd_1347 transcriptional regulator
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTV
RNWETGCNRIPYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAF
QPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA
>Tbd_1101 DEAD/DEAH box helicase
MTTFAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGGDILGAAQTGT
GKTAAFALPLIQRLLPFANTSTSPAKHPIRALILTPTRELAIQVEEAIQA
YTKHVPLRSLVVYGGVNINTQIPILKTGVEILVATPGRLLDHVQNKTLML
TQVNTLVLDEADRMLDMGFMPDLRRIVALLPAQRVNMMFSATFPEEIRKL
ADSILSTPTFIEVARNETAVTVTQVVHPVHHERKRQLLAHLIKSRDLRQV
LVFTGTKLGCNRLANELNKAGIHADAIHGDKTQQERIKALDAFKAGTIRV
LVATDVAARGIDIEALPFVVNYDLPHNAEDYVHRIGRTGRAGAKGEAISL
VSEAETRYLKDIERLIGTPLEPVIVPGFEPGAADVPAFESRPARAPRSSD
RGRERAPAKPQPSRDALFDAPYVPREPGQGDAAHAPARPAPTKQVAALFR
SPVKRNVPDQ
>Tbd_2575 ribonuclease II
MHVIFEEDGHFKAGSILSETEATAQVESASGKRSKVKAAAILLRFTAPAP
EDVMSAAEKLGEELDADFLWEAAGSEEFGFEQLAGEYYGHAPSPAESVAL
LQKLHASPIYFHKKGKGRYRPAPPETLAAAKAGLEKKRIAAERQAYLAHE
LAAFRLPPEYASLIPRILIAPDKNTLEYKALEDAAAATGLSPLRLVERCG
AIPSTLDFHLMSFLLEYFPRGTGFAPVTEPLDPPELPSSPVRAFSMDDEA
TTEIDDALSVAWHDDGSVRVGIHIAAPALGIAPGSELDRVARERLSTVYF
PGDKITMLPETLIHHYTLGEAHDCPALSLYVDVAADLRVLGTETRLEMVH
IADNLRHETLEIEFNAETLRNPAVADYPYRRELEWLHDFAAVLEAGRGKT
DTVERVDYSFKLDGDRISIAPRKRGSPIDKVVSELMIFANAHWGGWLAEK
RVPGIYRAQANGKTRMTTAPDPHVGLGVDQYAWSTSPLRRYVDLVNQRQL
ISLVRDEDPVYPPRSEALFSVVREFELAYDAYNDFQRRLERYWMLRWLIQ
ENVDEIVASVIREDLVRFDALPMVTRAPSVAGLAPGTRVRLAISNIDLLD
ISFHAEYLETVPDSTAAVP
>Tbd_0345 sigma-70 factor
MTQTMSLPIPAAYSLDSYIQTVSHYPMLSLEEEQKLARAWHDEQDLEAAR
RLVLSHLRVVVSIARHYLGYGLPHADLIQEGNVGLMKAVKRFDPDRGVRL
VSFALHWIRAEIHEYVLKNYRMVKLATTKAQRKLFFNLRSLKQSLNALTV
QQADAMAQELNVSRKDVLEMETRLSGHDVSIDPMVDDGEDDYSPIAYLAS
AEENPAQRLEREQTERLRESGLTSALEELDERSRHIIQARWLSEGDVATL
HELAAQYGVSAERIRQIEARALQKMRASIPA
>Tbd_0471 Metal dependent phosphohydrolase, HD region
MKSSTGAAPENSRTRKPAPAPRAPAMTHGFDTLREHLAHLGPEDVAQLEQ
AYEFSRSAHEGQFRKSGEPYISHPLAVAAILADWHLDAQTLCAALLHDVV
EDTPATAGEIEARFGKAVAVLVGGVSKLDKLAFESEQHAQAENFRKMLLA
MAQDVRVILVKLADRLHNMHTMGAMPAEKRRRIATETLEIYAPIANRLGL
HSVYQELEDLGFRYSHPNRYQVLAKAVKAARGNRRELVERVKVALQEKLE
QCKIEAAISGREKHLYSIYRKMQEKNLAFSEVFDIYGFRVVVRDQPACYL
ALGALHALYKPIPGKFKDYIAIPKANGYQSLHSILFGPNGTPIEVQIRTV
DMNRLAESGVASHWMYKSADTALNDVQTRTHRWLQSLLDIQADHGDSPEF
LEHIKVDLFPDEVYVFTPKGKIMALPRGATAVDFAFAVHSDVGHRCIAVK
INYELMPLRTQLRNGDHVEVLTASNASPNAAWLNFVVTGKARSHIRNYLR
NTRVEEAAALGERLLRNAIEALHPGAEADPTVWDRVVKDYGLQTRDELFA
GIGLGRKLPLVVAHQLLHVQGEKTGEPAHPHAISIRGTEGIAVELAQCCH
PIPGDPILGFIHKDRGLIIHTHDCPSIRAFRTDPEKWLDVEWEAEPGRMF
DVSIKVVVGNKRGVLAKVAASIAEHGSNIGNVSMEEEDGSPYTVLFFTVQ
VENRAHLARVMRGLRMLPDVVRIFRIKGKKDGRAAPLQ
>Tbd_1749 Two component Heavy metal response Transcriptional regulator, Winged helix family
MAGCGLFPGFYVMKILIVEDEPKTGAYLRQGLTEAGFVTDLARDGWDGLE
LAKSGHYDLMILDVMLPGLDGWQVLEGVRRAGIGTPVLFLTARDRVEDRV
KGLELGADDYLVKPFAFAELLARVHSLMRRGQAALESAVLKAADLELDLL
RRRATRAGRRIDLTAKEFALLELFLRRKGEVLPRSLIASQVWDMNFDSDT
NVIDVAVRRLRVKIDEGFDAKLIHTVRGMGYVLETSAESAAS
>Tbd_2095 Sigma-24 (FecI)
MSDRELDQMLVERAQRGDKRAFELLVTKYHRKLGRLLSRMVRDAAEVEDI
TQEAFIKAYRALPGFRGESAFYTWLYRIAVNTAKNYLVAHKRQPVSSDVL
AEDAENYEDGDLLRDIATPDAELQTKQIASAVNQAVDALPEELRTAITLR
EIEGMSYEEIAQMMECPIGTVRSRIFRAREAIAEKIRPMLGTSQDKRW
>Tbd_2086 ribonuclease III
MNNALLDARLQQALGYTFSRSGLLQQALTHRSYGALNNERLEFLGDSVLN
CSVARALYDAFPDLPEGSLSRLRANLVRQETLAEIAGALRLGDSLRLGEG
ELKSGGFRRPSILADALESLFGAVFLDAGFDEAQRVVRRLFDPLVAQIDP
KASGKDPKTRLQEILQSRRLPLPEYRLVGTEGEAHDQSFIVECLLAKPVL
STRGTGKSRRAAEQEAARQACAELQR
>Tbd_1275 conserved hypothetical protein
MSAAMLLETDWARDAPRLAAVRRAVFIDEQGVPEHMEWDADDAVSTHWLA
LVDGEPVGCARLLPDGWIGRMAVLPAWRGRGIGRALLGAALAAARERGHR
TVRLSAQRHAAAFYARAGFVVSGDVYEEAGIPHVAMQKTLAAT
>Tbd_2032 Negative regulator of class I heat shock protein
MLNDRARILLKTLVERYISEGEPVGSRTLSKHAGLDLSPASIRNIMSDLE
EMGFVASPHTSAGRVPTPRGYRFFVDTLLTVRPLDQVSVNHLENSLAASD
PQRLMTAASTLLSDLSQFAGLVMTPRRNPAFRQIEFLTLSDKRVLLIIVT
MEGEVENRVIVTEQSYSAAALTEAANYFNQNFAGHSFDHVRSKLRDELGR
MRDDITRLMAAAVDAGTQALDASQDNVVVSGSRKLLDVEELSSNMRSLRR
LFDAFEKKTGLLQLLDQSRSAAGVQIFIGGESELLPLDECSLVTAPYSVD
GVVVGTLGVVGPTRMAYERVVPIVDVTAKILSSALSQHK
>Tbd_0472 RNA polymerase, omega subunit
MARITVDDCIDNIPNRFELTLAVTYRARQLAQGSQPMVESKDKPIVTALR
EIAAGKVGREILNRGRA
>Tbd_2328 probable transcriptional regulator
MDTELARTFLTVAATGNFVAAASRLHVTQSTVSARIQTLETTLGARLFQR
GRNGAELTASGKRFLRHAKHLVRTVEQALHDVGLPQGFHDVLTLSGRIAL
WEGFLPHWVAWMREAAPDVSLRLEIGFEADIMQGLIEGTTDIGVMYTPTS
RPGLVVEPLFDENLMLVTSDLARGWPEEGYIHIDWGPEFHAQFSDHFPDA
PPPTVVANIGWLGVQQLLTYGGSGYFPQRLVRQLIEDGRLWRVPDSPQFK
LTAWMVFPREGSATLKSALDGLRTLARDEQARL
>Tbd_1399 Two Component Transcriptional Regulator, LuxR family
MPTTDPQTILIVDDHPLFRKGVIQLIQAAPEFRFVGEAASGGEGLTLAHR
LHPDMILLDLNMKDMNGVEVLKAIKDEGLDSRVIMLTVSDQAEDLIAALQ
AGADGYLLKDMEPEDLMQQLAEAARGKITISEGLTQLLVSSLREKTRPTS
LADAGLTEQENRILDHLVDGKSNKLIARDMGIAEGTVKVHVKHLLKKLNL
RSRVEAAVWADRCRRQAKP
>Tbd_0072 Possible Transcriptional Regulator, AsnC family
MNARDDFRPLDDTDRRIIQATQAGLPLTPRPYHAVAEQLGLPAAEVMQRM
QRMLDLGVIRRIGAVPNHYALGYRANGMTVWDVADERIDELGERIGQLDF
VTHCYRRPRHLPDWPYNLFAMVHGRTREEVEAKAALIADALGTASRARDI
LYSTRILKKTGLRIGA
>Tbd_2579 conserved hypothetical protein
MENVNLTNHFLIAMPGMVDPNFNGTLTYICDHSDQGALGVVVNRPIDLDL
STLFEQIGLSLPEGLHGEIVYFGGPVQTERGFVLHTPPLTFSSTLTVNDA
VSLTTSKDVLEAVSQGAGPEKFIVSLGYAGWSAGQLEDELKQNAWLSVAA
DPQVIFDLAPEERLPAAMKLLGIDFASLSDEAGHA
>Tbd_1383 Hydrogenase accessory protein HypB
MCDTCGCNLTPGNRHLAYKPVARGATAVSVLKGLLAKNDDQAGHNRAHFD
RRGILALNLMSSPGSGKTALLEATLTALKGEFTCAVIEGDLETENDAERI
RAKGVQAHQIVTGTACHLDAHLVHDALHEMKLDGVDILFIENVGNLVCPA
SFDLGQHLNVTLLSVTEGDDKPAKYPVMFRAADALLLTKTDLLPVLDDFD
LDRAEAHLRNLANPAPVLHLSARKDAGMGPWLDWIRVQLAQQLARVAAGQ
SRRPAIQPDGARYHHTEA
>Tbd_0073 Possible Transcriptional Regulator, AsnC family
MDELDRALVNTLQGGFPICERPYAEVAARVGSDEATVIARIDSLLARGLL
SRFGPMYHAAQMGGALSLAAMEIPPQDFERVTEIVNRQPEVAHNYARDHR
LSMWFVLATETPAAQQDTIARIERESGYPVYNMPKIREYFVELKLHV
>Tbd_0038 hypothetical protein
MPRLLPPRAHTPAMEFLLDKIRATKNNGEFFDSMRRG
>Tbd_1984 Possible Transcriptional Regulator, TetR family
MARTPAKVPSGEVYERIVDAALRLFTERGYFNTTVPDVARAAQVSVGSIY
HHFKDKEDVARALYLDLIARMQQALTEIAGGHASAHDRCRAVMAMLFELT
ESDRDAMDFMLYAKHRDFLPSERPVCSSKPFETMRKFVQEGMARGEIRGM
DVMVATSCLFGGAIRLITARLDGVLAEPLPAKLDEVWACAWRGIAA
>Tbd_0066 GreA/GreB family elongation factor
MEITTRPAITVSERDLERLEDMLAGLPDDLPGAEALRDELDRAEILRPEA
MPADVVTMNSRIRFVVEPAGKEMEMTLVYPRDFTGSPDQLPVTTPAGIAV
LGLAVGQEIEWQAPNGQKVGARIVDLAYQPERAGDYMR
>Tbd_1892 conserved hypothetical protein
METSETSETSMVTPEDIKSWITEKLPCDYIELDGDGQHFQAVIVSPAFAG
KNTIQQHRLVYDALGTRMHAQIHALSMKTYTPEDWAAR
>Tbd_2166 Protein of unknown function DUF193
MKCPFCGSLDTQVIDSRANEAGDAIRRRRRCAACDKRFTTWETAELRPPQ
IVKTNGTREDFSETKLREGFRRALHKRPVSTELVDAAVDRIRQRLLTLGE
REVPAREVGELVMTELKKLDKIAYIRFASVYKSFKDPDDFRDVLEDLAQG
PQAGDDPA
>Tbd_0216 Two component Transcriptional regulator, Winged helix family
MAANILLVEDEPGIQELLKFNLTQAGHQVTAAGDAEHALKFLKTTLPDVI
LLDWMLPGMSGIDLCRRLRGDARYQPVPIIMLTARGEERDKVLGLDTGAD
DYITKPFSPRELVSRIKAVLRRRAPQMTEEAVEVAGLRLDPVSHRVQGKG
IALELGPTEFRLLHFFMTHPERVYTRPQLLDQVWGDDVFVEERTVDVHIR
RLRLALEPSGHAALVQTVRGSGYRFSTEVG
>Tbd_0393 NusG antitermination factor
MRWYVVHAYSGFEKSVARALEERIERAGMRDRFGVIVDEKTGKPRPAIMV
PVEEVVEMRAGQKKTAERKFFPGYVLVQMEMDDDTWHLVKSTPKVTGFVG
GTATKPAPISEKEVQAILDQMREGVEKPKPKVLFEVGEQVRVIDGPFTDF
NGNVEEVNYDKSKLRVSVMIFGRATPVELGFGQVEKS
>Tbd_1972 transcriptional regulatory protein GntR
MSRYHDIAEHTEKLIVDGVLRAGDRLPSVRQACRIHDVSPVTVTQAYYLL
ESRGLIEARPKSGYFVRARLRQNLREPDMTRPVASSTQLQVSDFIFQILE
SVRDPSVVPLGSSFPSPFLFPLDKLGRFLASAARKLDPLATVIDLPPGNE
ELRRQLALRYLASGASVSPDEIVITCGAMEALNLCLQAVARPGDLIAIES
PAFYAGLQASERLGLKVIEIPTHPREGISMAALAETLQRHPVKACLFMLN
FSNPTGSLVPDERRKELVELLHRHDVPLIEDDVYAELYFGRQAPLCTKAV
DPHGMVMHVSSFSKNLAPGYRVGWVAAGRFAERVQRQKFSTTLATTIPVQ
IALAEYLKHGGYENHLRHLRRKLAEQEAALAAAIEPNFPEGTRLARPDGG
YFLWLELPPQIDTLVLHQRTLARGISTAPGPIFSAKREFTHHLRLNFGHS
DSQRQQDAMVTLGQLIAEQL
>Tbd_1653 Predicted transmembrane transcriptional regulator (anti-sigma factor)
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMM
HDAFDSVLNEPLPLNLVRATRRPAFAAPARAVAASLALLAAGLVGYAFGV
AGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRV
GTPLQAPDFSAQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAA
ADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTMQRLAVAAYGQ
LTP
>Tbd_0228 Transcriptional Regulator, MarR family
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFS
NTPQALTEYLGLTKGTVSQTLLVLARRRLISRYADPRDGRVVRLILTEGG
TTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGL
CGSCRYNRRLGPRSYFCELMQEKLGSPEVRRICREHAPPPAD
>Tbd_2070 Possible Transcriptional Regulator
MATKTDDPALITFDALPDSAFVQSATLAALFQTSGTTIWRWAKDGRLPKP
RKLGGNSTRWNVGEVRQAIAKMGA
>Tbd_1180 RNA polymerase sigma-70 factor
MVGKPSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDA
VSRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIH
KLEQRHGKAPSESEISAELGIPIDQYQSMLGDVKCSQLLYYEDFSDEDSA
SFLERYLVDGSNDPLAVLEDEGFRASLIAAIHHLPERERSMMGMYYEQDM
NLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD
>Tbd_2570 Two Component Transcriptional Regulator, LuxR family
MPLSSCRSAQLKTLLADDHPLMREGVRQVLSQLEPPVEIIDAHDYPSLFA
QTALHADLDLAVVDLNMPGFVGVQGISQFRARFPDVPLVVLSASESSHDI
RSVLEAGALGYIPKAASSATMLAALQQVLAGDIYIPTCPPAVREDGPRGA
RTADFDALQHSGLTARQLEVARLLAQGCANKAIAGSLAMSESTVKVHIAA
IFRALSVTNRTEAVLAIQRLTQGS
>Tbd_0661 hypothetical protein
MPSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPN
APAGVVFEVVDRDPRALEYALPWVKQAARRLKARFPALPMALVTHGQEMF
ALKDGARGTNPAIHQLAESLSRDDGIPVHVCETYAGTRGLGAEDFPAYVD
VAPEGPAQIRNYEALDYVRLVVPRAATLKPR
>Tbd_0398 DNA-directed RNA polymerase, beta subunit
MAYTFTEKKRLRKSFASRTNTLPVPFLLATQLESYRAFLQEGRSRDERLN
EGLQAAFTSIFPIESHSKNARLEYVSYQLGEPVFDIKECQQRGLTYCAPL
RAKVRLVIMDKEASKPTIKEVKEQEVYMGEIPLMTPTGSFVINGTERVIV
SQLHRSPGVFFEHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDAKDILFF
RVDRRRKMPVTILLKALGYTPESILDAFFNKDTFYINTLGIQFELVPERL
RGEIARFDICGKDDKVIVAKDKRITAKHIRELDAAGVKKWAVPGEFVVGR
VLAHDVVDKDTGELVARANDEITEELLKKLAAAGIDKFQTLYTNDLDHGA
FISQTLRTDDTTDEYAAKVAIYRMMRPGEPPTEDAVNALFVNLFFSDERY
DLSAVGRMKFNRRIGRDELTGTGTLSTEDIVAVIKILVELRNGRGEIDDI
DHLGNRRVRSVGELAENQFRAGLVRVERAVRERLSQAESDNLMPHDLINA
KPVSAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGF
EVRDVHPTHYGRVCPIETPEGPNIGLINSLALFARTNWYGFIETPYRKVV
DNKVTDEIEYLSAIEESKYVIAQANAELDAKGKFKDDLVSCRFKNEFTLS
APDRIEYMDVAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRP
EKPFVGTGIERTAAVDSGTVVIAHRGGRVDYVDAGRIVIRVHDEEARAGE
VGVDIYSLIKYTRSNQNTNINQRPLVKVGDVIARGDVIADGASTDMGELA
LGQNMLVAFMPWNGYNFEDSILINEKVVAEDRYTSIHIEELSVVARDTKL
GPEEITRDISNLAERQLARLDESGIIAIGAEVEAGDVLVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLKVPSGMSGVVIDVQVFTREGIERDKRA
QSIIDTQLAEYKKDLTDRMRIVEDDTFARLEKLLHLKVVNGGPKKLAKGS
KISKEYLDSLNRHDWFDIRLADDEASRQVESLKDSLTQKRVEFDAMFEEK
KQKLTAGDELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPV
EDMPFMADGRPVDIVLNPLGVPSRMNIGQILETHLGWASKGLGEKIGQMM
AAQTKSVVKELRHFFKEVYNQSGKAEDIDNFTDDEILELGQNLQKGVPFA
SPVFDGATEEEIRRMLALAGLPEGGQVTLYDGRTGEAFDRQVTVGYKHVL
KLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
SYVLQEMLTVKSDDVNGRTKVYENIVKGDHKIEAGMPESFNVLVKEIRSL
GIDIDLERY
>Tbd_2625 cbbR1, transcriptional regulator
MHSHTTFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAP
LIEHIGKRIHLTADGQQLAQATREIFAILDRFTMSVAERRGLKQGKLSLM
AITTASYFAPRLLGEFAKLYPGIDVSLRVTNKEQVLASIADNLDDLYFLG
QPPEDIDVIATPIMDNPIVVLAAPDHPLAHTRKIPLEQLAKESWLMREKG
SGTRNAIERRFAESGIAVHPRLELGSNEAIKQAILAGLGISALSRHALAL
NQPDQFAVLDVDGFPILRHWYAVYPAGRQLSVAARAFLDYLLGDGKDEKS
LGDKRRSAQRGRA
>Tbd_2639 cbbR2, transcriptional regulator
MRRLTLRQFRIFEAVARHLSFSRAAEELHLSQPAVSMQVRGIEVILGMPL
TEQIGRKIFLTDAGREVLHASQAITARLDDLQHNLVQLRGLEQGRLTLAV
TSTVNAVATGILARFRARYPDIAIHLGVSNRAEVLDMLVGNQVDLAIMGQ
VPDHLGLDATRFMDNPLVVIAPPDHPLASRRKVPIETLADEPFLVREAGS
GTRGAMERFFAARGLELKSSMEMSSNEAIRQAVQAGLGLGILSLQTLELE
LALKRLAVLKAEGFPIMRHWYVVHRADKRLSPVAQAFKKFVLGGQGGRRR
PA
>Tbd_2651 cbbR3, transcriptional regulator
MNVTFRQLRLLEAVARHSSFTRASEELHLTQPAVSTQIKQLEEEIGMPLF
EQMGKKIFLTEAGKEVYAFSRNLAQQFRDIESVLDDMKGVKRGTLSLTVT
STGKYFAPYLLAAFLKRYPGTQVHLEVTNREEVVQQLHDNTPDMAIMGTP
PEHIELHSQAFMQNPLVIIAPPDHPLVGVSRVPLSRLVEENFILRERGSG
TRNAVERFFEQRGIKLNTSMEMSRNEAIKHAVMAGLGLGIVSLHTLEFEL
ALSRIALLSVESFPIMKEWYLVHRNGKRMSPIAQAFHQFVLNEADRIMKL
PQPKPVTRSRRRVTRS