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2024-05-05 20:28:24

Gene list

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COG category: Transcription
Organism: Desulfovibrio desulfuricans G20, G20

Number of genes found: 156

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfovibrio desulfuricans G20, G20
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Dde_2977 transcriptional regulator, MarR familychromosome CDS2959446 417 + 0.549161
NA Dde_3327 transcriptional regulator, GntR familychromosome CDS3312770 756 - 0.648148
NA Dde_1732 hypothetical proteinchromosome CDS1790583 171 - 0.497076
NA Dde_3024 acetyltransferasechromosome CDS3011583 438 - 0.525114
NA Dde_0647 Protein of unknown function UPF0074chromosome CDS666161 441 - 0.571429
NA Dde_1352 putative transcriptional regulatorchromosome CDS1369597 468 - 0.540598
NA Dde_2387 two component transcriptional regulator, winged helix familychromosome CDS2411516 690 - 0.591304
NA Dde_2904 hypothetical proteinchromosome CDS2890529 285 - 0.533333
NA Dde_1307 hydrogenase accessory protein HypBchromosome CDS1326731 660 - 0.559091
NA Dde_2805 Prophage antirepressor-likechromosome CDS2795036 318 + 0.534591
NA Dde_0900 sigma-24 (FecI-like)chromosome CDS926234 585 + 0.558974
NA Dde_0749 regulatory protein GntR, HTHchromosome CDS775784 711 + 0.607595
NA Dde_0029 parB-like partition proteinschromosome CDS23708 918 - 0.54902
NA Dde_3360 DNA-binding proteinchromosome CDS3333012 435 + 0.542529
NA Dde_1151 metal dependent phosphohydrolasechromosome CDS1178366 747 + 0.598394
NA Dde_3179 putative transcriptional regulator, AsnC familychromosome CDS3165816 477 + 0.557652
NA Dde_2795 Prophage antirepressor-likechromosome CDS2787767 594 + 0.516835
NA Dde_0500 putative transcriptional regulatorchromosome CDS507441 303 - 0.508251
NA Dde_3684 hypothetical proteinchromosome CDS3645540 531 + 0.527307
NA Dde_0224 Protein of unknown function UPF0074chromosome CDS206952 600 - 0.63
NA Dde_0553 putative transcriptional regulatorchromosome CDS572745 1470 - 0.606803
NA Dde_3474 chromosome initiation inhibitorchromosome CDS3435579 951 - 0.645636
NA Dde_2052 Sigma-70 factorchromosome CDS2094872 1770 - 0.515254
NA Dde_1399 ATPasechromosome CDS1414035 1260 - 0.559524
NA Dde_0772 serine phosphatasechromosome CDS794704 1509 + 0.609675
NA Dde_0263 metal dependent phosphohydrolasechromosome CDS247395 1740 - 0.628161
NA Dde_1270 putative transcriptional regulator, Fis familychromosome CDS1286947 1395 - 0.556989
NA Dde_1561 putative transcriptional regulator, TetR familychromosome CDS1579115 660 + 0.563636
NA Dde_2822 response regulator receiver domain protein (CheY-like)chromosome CDS2806277 915 + 0.578142
NA Dde_1936 putative phage-related proteinchromosome CDS1987290 423 + 0.631206
NA Dde_0329 putative acetyltransferasechromosome CDS317378 441 - 0.600907
NA Dde_1635 transcriptional regulator, Fis familychromosome CDS1686704 1731 + 0.534373
NA Dde_0289 putative transcriptional regulator, Fis familychromosome CDS277236 1902 - 0.622503
NA Dde_0977 two component transcriptional regulator, LuxR familychromosome CDS1004919 672 + 0.559524
NA Dde_1771 Sigma-54 factorchromosome CDS1825203 1425 + 0.506667
NA Dde_3127 putative transcriptional regulator, TetR familychromosome CDS3120322 564 - 0.549645
NA Dde_3654 transcriptional regulator, LacI familychromosome CDS3616835 1065 + 0.622535
NA Dde_3721 putative transcriptional regulator, ArsR familychromosome CDS3681318 333 + 0.555556
NA Dde_2536 hypothetical proteinchromosome CDS2555526 945 - 0.593651
NA Dde_0960 putative transcriptional regulator, TetR familychromosome CDS984363 621 + 0.505636
NA Dde_0130 regulatory protein, DeoRchromosome CDS122008 846 - 0.601655
NA Dde_2991 NusG antitermination factorchromosome CDS2971317 555 + 0.562162
NA Dde_1158 transcriptional regulator, putativechromosome CDS1183359 813 + 0.584256
NA Dde_1248 GreA/GreB family elongation factorchromosome CDS1262867 414 - 0.560386
NA Dde_0157 regulatory protein GntR, HTHchromosome CDS143232 1434 - 0.604603
NA Dde_2438 transcription antitermination factor NusBchromosome CDS2458725 465 + 0.576344
NA Dde_2231 DNA-directed RNA polymerase, alpha subunitchromosome CDS2269114 1047 - 0.537727
NA Dde_1546 transcriptional regulator, IclR familychromosome CDS1564706 783 - 0.546616
NA Dde_1026 heat-inducible transcription repressor HrcAchromosome CDS1050835 1065 - 0.593427
NA Dde_2949 DNA-binding protein, putativechromosome CDS2927861 696 + 0.581897
NA Dde_1018 response regulator receiver domain protein (CheY-like)chromosome CDS1041286 396 + 0.573232
NA Dde_2002 putative transcriptional regulator, TetR familychromosome CDS2044882 576 + 0.496528
NA Dde_1748 DEAD/DEAH box helicase-likechromosome CDS1803994 3204 - 0.489388
NA Dde_1838 conserved hypothetical proteinchromosome CDS1889175 1203 + 0.544472
NA Dde_0950 hypothetical proteinchromosome CDS975219 990 + 0.630303
NA Dde_2344 conserved hypothetical proteinchromosome CDS2363627 1548 - 0.631137
NA Dde_1660 DafA proteinchromosome CDS1712511 312 + 0.503205
NA Dde_2457 metal dependent phosphohydrolasechromosome CDS2480081 1077 + 0.587744
NA Dde_1569 metal dependent phosphohydrolasechromosome CDS1591070 2148 + 0.554469
NA Dde_1564 DEAD/DEAH box helicase-likechromosome CDS1584094 3207 - 0.537574
NA Dde_2579 transcriptional regulator, GntR familychromosome CDS2595241 1041 + 0.567723
NA Dde_2490 putative transcriptional regulator, Fis familychromosome CDS2509640 894 - 0.558166
NA Dde_3426 putative transcriptional regulatorchromosome CDS3389784 1317 - 0.492787
NA Dde_0692 response regulator receiver domain protein (CheY-like)chromosome CDS706216 438 - 0.573059
NA Dde_0556 transcriptional regulator, XRE family with cupin sensor domainchromosome CDS578103 570 + 0.563158
NA Dde_1396 transcriptional regulator, Fis familychromosome CDS1412346 459 - 0.62963
NA Dde_3352 conserved hypothetical proteinchromosome CDS3329755 615 + 0.569106
NA Dde_2039 transcription-repair coupling factorchromosome CDS2080135 3459 - 0.583984
NA Dde_1942 metal dependent phosphohydrolasechromosome CDS1990462 1092 - 0.510989
NA Dde_0247 DNA-directed RNA polymerase, omega subunitchromosome CDS231033 222 + 0.563063
NA Dde_3135 regulatory protein, ArsRchromosome CDS3126147 1047 - 0.548233
NA Dde_0515 Elongator protein 3/MiaB/NifBchromosome CDS523453 930 - 0.621505
NA Dde_1611 transcriptional regulator, AraC familychromosome CDS1659190 900 + 0.52
NA Dde_2480 DEAD/DEAH box helicase-likechromosome CDS2499903 1593 - 0.61833
NA Dde_1932 LexA repressorchromosome CDS1983988 624 - 0.584936
NA Dde_3224 hypothetical proteinchromosome CDS3214173 432 - 0.581019
NA Dde_0669 transcriptional regulator, MarR familychromosome CDS684194 564 - 0.613475
NA Dde_0294 putative transcriptional acitvator, Bafchromosome CDS284016 792 + 0.603535
NA Dde_3719 Protein of unknown function UPF0074chromosome CDS3680327 495 - 0.608081
NA Dde_2217 putative transcriptional regulator, TetR familychromosome CDS2257030 633 - 0.557662
NA Dde_3227 transcriptional regulator, Fis familychromosome CDS3215833 1089 + 0.623508
NA Dde_2997 DNA-directed RNA polymerase, beta subunitchromosome CDS2974769 4128 + 0.580426
NA Dde_1708 Ribonuclease IIIchromosome CDS1765073 690 + 0.576812
NA Dde_3112 Protein of unknown function UPF0074chromosome CDS3101841 441 + 0.598639
NA Dde_2834 conserved hypothetical transcriptional regulator, LysR familychromosome CDS2821021 930 - 0.595699
NA Dde_0885 conserved hypothetical proteinchromosome CDS915543 174 - 0.477012
NA Dde_2349 putative transcriptional regulator, TetR familychromosome CDS2368887 1074 + 0.575419
NA Dde_3114 metal dependent phosphohydrolasechromosome CDS3105350 1572 + 0.566794
NA Dde_3051 putative transcriptional regulator, Fis familychromosome CDS3041163 1398 - 0.482833
NA Dde_3044 conserved hypothetical proteinchromosome CDS3035859 531 + 0.625235
NA Dde_2998 DNA-directed RNA polymerase., Acetylornithine deacetylasechromosome CDS2979009 4161 + 0.579188
NA Dde_2500 transcriptional regulator, XRE familychromosome CDS2525516 210 - 0.528571
NA Dde_3161 NusA antitermination factorchromosome CDS3147059 1290 + 0.58062
NA Dde_1264 putative transcriptional regulator, Fis familychromosome CDS1278502 1749 - 0.57004
NA Dde_1928 sigma-24 (FecI-like)chromosome CDS1980289 585 - 0.617094
NA Dde_2956 putative transcriptional regulator, CopG familychromosome CDS2936881 420 + 0.571429
NA Dde_2578 putative transcriptional regulator, AsnC familychromosome CDS2594769 495 + 0.537374
NA Dde_2318 transcriptional regulator, XRE family with cupin sensor domainchromosome CDS2336442 567 - 0.555556
NA Dde_1614 regulatory protein GntR, HTHchromosome CDS1662089 675 + 0.637037
NA Dde_1980 transcriptional regulator, putativechromosome CDS2025916 660 + 0.539394
NA Dde_0422 acetyltransferase, GNAT familychromosome CDS421604 492 - 0.664634
NA Dde_0349 transcriptional regulator, LysR familychromosome CDS338678 885 + 0.636158
NA Dde_0161 response regulator receiver domain protein (CheY-like)chromosome CDS148093 813 - 0.569496
NA Dde_3226 phage shock protein Achromosome CDS3214999 666 - 0.600601
NA Dde_1552 putative transcriptional regulator, Fis familychromosome CDS1570769 1578 + 0.570342
NA Dde_0188 conserved hypothetical proteinchromosome CDS173418 897 - 0.594203
NA Dde_2130 transcription termination factor Rhochromosome CDS2178283 1512 + 0.505291
NA Dde_3047 serine phosphatasechromosome CDS3037525 1194 - 0.582915
NA Dde_0621 regulatory protein GntR, HTHchromosome CDS640922 1644 - 0.601582
NA Dde_2226 transcriptional regulator, LysR familychromosome CDS2266322 960 - 0.53125
NA Dde_3702 transcriptional regulator, AraC typechromosome CDS3664296 927 - 0.580367
NA Dde_3132 hypothetical proteinchromosome CDS3123727 300 - 0.58
NA Dde_1244 regulatory protein GntR, HTHchromosome CDS1258907 696 + 0.583333
NA Dde_2665 conserved hypothetical proteinchromosome CDS2678036 744 - 0.571237
NA Dde_1916 hypothetical proteinchromosome CDS1968005 279 - 0.598566
NA Dde_2129 transcriptional regulator, CarD familychromosome CDS2177681 516 + 0.501938
NA Dde_1560 transcriptional regulator, MarR familychromosome CDS1578569 456 + 0.554825
NA Dde_3472 conserved hypothetical transcriptional regulator, MarR familychromosome CDS3433812 981 - 0.623853
NA Dde_2538 hypothetical proteinchromosome CDS2557002 378 + 0.55291
NA Dde_1941 response regulator receiver sensor signal transduction histidine kinasechromosome CDS1989255 1188 - 0.530303
NA Dde_2537 putative transcriptional regulator, TetR familychromosome CDS2556751 264 + 0.496212
NA Dde_2316 RNA binding domain protein, S1chromosome CDS2332138 2223 + 0.604588
NA Dde_3731 regulatory protein, DeoRchromosome CDS3688805 765 - 0.580392
NA Dde_3137 transcriptional regulator, AraC familychromosome CDS3128276 885 - 0.492655
NA Dde_1741 Prophage antirepressor-likechromosome CDS1796359 555 - 0.517117
NA Dde_2974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)-likechromosome CDS2957082 627 - 0.598086
NA Dde_0403 transcriptional regulator, MarR familychromosome CDS399233 471 - 0.539278
NA Dde_0126 putative transcriptional regulator, MerR familychromosome CDS117524 876 + 0.579909
NA Dde_2598 ribonuclease Rchromosome CDS2616173 2610 - 0.599234
NA Dde_2633 transcriptional regulator, MerR familychromosome CDS2649641 372 - 0.596774
NA Dde_0235 Protein of unknown function UPF0074chromosome CDS219976 663 - 0.582202
NA Dde_2674 two component transcriptional regulator, LuxR familychromosome CDS2684404 648 + 0.572531
NA Dde_0779 DEAD/DEAH box helicase-likechromosome CDS799703 1998 + 0.472973
NA Dde_0747 putative transcriptional regulator, ArsR familychromosome CDS774860 363 + 0.592287
NA Dde_0897 regulatory protein, LacI familychromosome CDS924950 420 + 0.514286
NA Dde_2512 GreA/GreB family elongation factorchromosome CDS2533456 708 - 0.518362
NA Dde_0173 RNB-like family proteinchromosome CDS156038 2097 - 0.611826
NA Dde_0152 DEAD/DEAH box helicase-likechromosome CDS138936 1719 + 0.576498
NA Dde_2924 ERF family proteinchromosome CDS2903508 822 - 0.53163
NA Dde_0893 LexA repressorchromosome CDS921657 624 - 0.519231
NA Dde_3291 transcriptional regulator, MerR familychromosome CDS3279069 870 + 0.491954
NA Dde_0638 putative anti-sigma-28 factor, FlgMchromosome CDS657648 306 - 0.54902
NA Dde_1899 hypothetical proteinchromosome CDS1950618 573 - 0.577661
NA Dde_0792 acetyltransferase (GNAT) family proteinchromosome CDS813102 504 + 0.595238
NA Dde_2910 putative transcriptional regulators with the CopG/Arc/MetJ DNA-binding domainchromosome CDS2893856 255 + 0.576471
NA Dde_0383 Sigma-70 factorchromosome CDS379211 684 + 0.53655
NA Dde_0407 transcriptional regulator, putativechromosome CDS401530 966 + 0.611801
NA Dde_1723 response regulator receiver (CheY-like) modulated serine phosphatasechromosome CDS1780447 1146 - 0.54712
NA Dde_1892 putative transcriptional regulator, TetR familychromosome CDS1944173 579 - 0.559586
NA Dde_3468 serine/threonine protein kinasechromosome CDS3428906 1392 - 0.612787
NA Dde_0341 DEAD/DEAH box helicase-likechromosome CDS330553 1590 - 0.606289
NA Dde_2116 sigma 70 family proteinchromosome CDS2165550 1083 + 0.56048
NA Dde_1283 putative transcriptional regulator, TetR familychromosome CDS1301850 585 - 0.504274
NA Dde_0087 putative transcriptional regulatorchromosome CDS80378 906 - 0.62362
NA Dde_2776 putative transcriptional regulator, ArsR familychromosome CDS2779050 333 + 0.402402
NA Dde_1230 hypothetical proteinchromosome CDS1251148 540 + 0.514815