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# Synechococcus sp. CC9605, CC9605

>Syncc9605_2158 putative DNA-directed RNA polymerase (omega chain)
MLSAGVDSKDLSKRGESLIRQSSNRYLTTVRIAFRAKQRRFDDFDGLLEE
SSVKPVQRAIVELSDEQDQPDLLPG
>Syncc9605_1709 hypothetical protein
MMHINGVTQYDIARELGVTQARVSQFIQQAARSHPVNKLSLDERMAISEE
RWNLSEREMREAITQQRLNGRTVTETVTEPSGRITTKVTRQAGVDPALLR
ALLTHHDRRARQLNNQLSPDTGVQAVQVNVVKDFIQQGETAGKLTPEQWN
QQAIDV
>Syncc9605_0070 hypothetical protein
MGSTRKRTRRARSKPGLGLAGGGVVAPRSHPAAWAPATGASRHLLRTGVQ
GDVDATITALAEQGLQRCQSEDIASEAGTTPATNGAITDLLRDPFLSTDP
DQARPAPADLVTAMPWLSNDAEPRAMPTADPFPPLTPIPAPVQSPEPTVS
PEANPQAEMQQEPEPTTEEPPLDAIKPTPQPQKPEAAKLLEHSWLRVQLQ
PEIKSPTDSVEPMGLINRIKGVFARSAGR
>Syncc9605_0929 LexA repressor
MTRAPQEPLTTAQQELYDWIADYIGTHRHSPSIRQMMQAMGLRSPAPIQS
RLRHLQQKGWITWQEGQARTLQLLGDMVGAAGIPVLGAVAAGGLVTAFDD
VQEHLDLAPVLETRGLFALTVNGDSMVDSHIADGDVVLMEPVQDPQRLRN
GTVVSALVAGSGTTLKHFHRHGATVVLEAANPAYQPIELAAEQVDVQGRL
VAVWRQV
>Syncc9605_2065 DNA-directed RNA polymerase
MTSSSKSRKSKSSKASKAAKEAPVSASRPLSKTPPPFRNQVIDKRALKQL
VAWSYKNHGTAVTSSMADNLKDLGFKYATQAAVSISVDDLKVPEAKKDLL
GQAEEQITATEERYRLGEITEVERHTKVIDTWTETNERLVDAVKKNFDEN
APLNSVWMMANSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIRTNFREG
LTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREDDCGT
TRHIVVDAEDGKFGSRLVGRLTAAQVVNADGEVLAERDTEIDPPLSKSFE
AAGVKAVSVRSPLTCEANRSVCRKCYGWALAHNELVDLGEAVGIIAAQSI
GEPGTQLTMRTFHTGGVSTAETGVVRSKVAGTVEFGSKARVRPYRTPHGV
NAQQAEVDFNLTIKPSGKGKAQKIEITNGSLLFVDNGAEIDADVTVAQIA
AGAVKKSVEKATKDVICDLAGQVRYEEAIQPREVTDRQGNITLKAQRLGR
MWVLSGDVYNLPPNAQPVVGSETQVTEGQVLAEASQRSEYGGEVRLRDSI
GDSREVQIVTTAMTLKDFKLLEESTHSGEIWNLEAKDGTRYRLNTIPGSK
IGSGEVIAELADDRFRTGTGGLVKFAPGLAIKKARSAKNGYEVNKGGTLL
WIPQETHEINKDISLLMITDGQWIEAGTEVVKDIFSQTAGIVTVTQKNDI
LREIIVRSGEFHLCTDAKALERFEGDGQMVNPGEDIAKGLSVDTMKYVQT
VETPEGKGLLLRPVEEYTIPNVAQLPELSHVKQANGPHLGIKATQRLAFK
DNELIKSVEGVELLKTQLLLETFDTTPQMTVDVEKAPDKRAKTISRLRLV
ILESILVRRDTMSDSSHGSTHTELQVEDGVSVKAGDVVATTQILCKQAGL
AQLPEATEADPVRRMIVERPEDTTTLSTSGKPVVSVGQRIVDGDALAEGE
TASCCGEIEAVSGNSVTLRLGRPYMVSPDSVLHVRDGNLVQRGDGLALLV
FERQKTGDIVQGLPRIEELLEARRPRESTILCKKPGTVEIKQGEDDESLA
VNVIESDDAIGEYPILLGRNIMVSDGQQVTAGELLTDGPINPHELLECYF
EDLRSRKPLMEAAQEAIANLQHRLVTEVQNVYKSQGVSIDDKHIEVIVRQ
MTSKVRVEDAGDTTLLPGELIELRQVEDTNQAMAITGGAPAEFTPVLLGI
TKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPA
GTGFSGFEEELQKEAGPHPDILSEDPAGYRRMQNLRPDYTVDMPPAASAS
AVLDDPSDADLEATRTRHNIDPSASNFAAFTRPDADNELKEEQVVDAEAV
EGLQEEGLLSDE
>Syncc9605_2621 urease accessory protein UreG
MSSKLRLGVAGPVGSGKTALVEALCRRLRDDLQLAVVTNDIYTQEDAQFL
TRAGALDPERIRGVETGGCPHTAIREDCSINRAAVAELEAQFPELDLVLV
ESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLLVINKI
DLAPQVGADLALMEQDTRRMRGDRPWCFTNLHSGEGLEQVLAFLSQQLPN
S
>Syncc9605_1110 conserved hypothetical protein
MVSCLDPSSCGIGRSISSAPHLFTPSVRAGIGIDADDFRLSPTASSDRFT
FHLLRADALLIQGYWSLRRSIFCSEQHVFEESDRDELDAIAYPIAALHHS
SEPKHDDGAETDVVGVVRIVETEPRLWYGGRLGVHADFRRQNQIGKGLIW
KAVTTANGWGCDRFLATVQIQNVRFFRRLHWTSIDELEIRGIRHHLMEAD
LGYYLPSREQRPIASHHVLAAA
>Syncc9605_2284 putative transcriptional regulator
MSASAPANTRDAVLSLLLERGEEDAGTLAGAVGISVQAMRRHLRSLADSG
LVRASSNASGPGRPSNRWCLTDEGRAQFPDGSGRFALGLLNSMRSHLPEA
TVRQLLNQQAESKASQYRQSLGEASLEARLEHLARLRRDEGYVTVCNRDD
DGISWRLEEAHCSVQRIAEEFPAVCDQELLLIRRTVPDCRVERVHWRLEG
GHACGFRITPLAQG
>Syncc9605_0093 type II alternative RNA polymerase sigma factor, sigma-70 family
MAPAATAASKPKTSVKTAKAVTADVDLVRSYLRDIGRVPLLTHEQEITLG
RQVQELMDLESLESELKSKAGEKPSRDQLAKASGLSSIQLKRKLQHGRRA
KERMVAANLRLVVSVAKKYTKRNMELLDLIQEGTIGLVRGVEKFDPTRGY
KFSTYAYWWIRQGITRAIAEKSRTIRLPIHITEMLNKLKKGQRELSQELG
RTPTVTELAEFVELPEDDVKDLMCRARQPVSLEMKVGDGDDTELLELLSG
DGDLPSDQVEEDCLKGDLRSLLGQLPHLQEQVLRMRYGMDGEDPMSLTGI
GRILGMSRDRVRNLERDGLAGLRRVSDQVEAYVAC
>Syncc9605_1979 conserved hypothetical protein
MFAGPGAGKTLGAMLGFRAMRDQGRLDHFVVFCHRTSILNQWKSAAARLG
LQLEEWSCPPEQSQDADGLLVTYQGAGRQLEALGARLEQWGLSACMAIAD
EAHHLGVDPDEPDATAWGQTFLELTGSVRLRLGLTGTPFRADNLAFCAAR
RMRVRLDDGGWVEQIRPDLCVEPRDLIAAGDVRPLEFRFQDGWVEHSREG
HPDRDVSPLSVEQRESWRARNLRRAIRLADSSSIGQQVLLRAQQKLNKLR
ERQPQAAGLVIARDISHAEAISRVLIDDGNRVELIHSQSPQATERLNAFQ
SGDADWLVSIDMCAEGFDAPRLRVVAYLTTVVTRSRFVQGITRAVRMTPE
LAAREAIPREASYVFAPADPLLMDYARSWSVAEPYVLRPQEHEVEDEQPG
VGAWRGPSLPLEAVEDGAGAVIRLKMPELPTFLQR
>Syncc9605_2079 NusA antitermination factor
MALVLLPGLSNLIDDISEEKKLPPQVVEAALREALLKGYERYRRTLYLGI
SEDPFDEEYFSNFDVGLDLEEEGYRVLASKIIVDEVESEDHQIAIAEVMQ
VADDAQVGDTVVLDVTPEKEDFGRMAAATTKQVLAQKLRDQQRRMIQEEF
ADLEDPVLTARVIRFERQSVIMAVSSGLGRPEVEAELPRRDQLPNDNYRA
NATFKVFLKEVSEVPRRGPQLFVSRSNAGLVVYLFENEVPEIQEGSVRIV
AVAREANPPSRSVGPRTKVAVDSIEREVDPVGACIGARGSRIQQVVNELR
GEKIDVIRWSQDPGQYIANSLSPARVEMVRLVDPVGQHAHVLVPPDQLSL
AIGREGQNVRLAARLTGWKIDIKNSTEYDQEAEDAVVAELISQREEEEAL
QQQAEERLAAEQAARAEEDARLRELYPLPEDEEEYGEEQPEQEFSEEEPA
EVEAGTESETEATDAAVEADADADPDQEQVR
>Syncc9605_1839 two component transcriptional regulator, winged helix family
MPSHCIPSAHPLMGMSRDTMIWLVDDDPELRKMVGTYLIDQGYDVRSLCD
VKQFEARLECQRPDLVVLDLMLPGDDGLTALRRLRDAGDDLPVVMLTARA
DGVDRIIGLEQGADDYLAKPFLPRELTARIEAVLRRRNAMPAGTPVECGE
CIRFGDNQLDLSARTLLQNNQPVVITSGEFSLLAAFVRYPHRPLSRERLI
ELARGPGSDTDSRSMDVQVSRVRKLVEPDPTRPRYVQTVWGYGYVFVPDG
TPRSR
>Syncc9605_1442 hypothetical protein
MPALLLGTSSLQTPSLNRRGTAELFEISQRARLVQSFEADPSAPVPRIWQ
QRLGPTAAPGRWARHGRGLWWLIWLEDGEPLLALPAASHSSSLDLLFADE
LHRSSFDQLPSLKRQEPSALEQSCLQRLTSGTAVQWQPSGLASISGSLFP
ALASVSHGCLRVALQGDRLLAEGPVAPGTFAFLQPHHEKHPANFVRFDPP
SAYLELNSVSLQPLLGSLFNNSLFAEQLDSRYGLPKEVREVLLNAPVVVR
LDALEAGRFQALIQARLMLAADQTDRIKRSLDAVASALLQRGFQPVQRSL
LSLEGQPSDRVADVWLDPQGHPQGGWSLSPPLRGQVELLLALGDAPKLGP
NPLKRRGQQWLCLQARPDQLVRLDWLRPGWPRVLRQASQLELEMTALPKP
QQPGWIRLQLEVR
>Syncc9605_0588 membrane-associated 30 kD protein-like
MGFFDRLSRLVRANANAAVSSMEDPAKILDQSVADMQADLVKLRQAVALA
IASQKRLTSQAEQAAAQSKTWYERAELALKKGEESLAREALTRRKTFQET
ATSLTAQVQAQDGQVESLKKSLVALEGKIAEAKTKKDMLKARAQAAKAQQ
QLQSTVGSIGTDSAMAAFERMEEKVEALEATGQAAAELAGSDLESQFAAL
ESGGGVDDDLEALRAQLKGGPEAVALPASEASEAVKPVQVEEVDAELEDL
KRSIDKL
>Syncc9605_0631 secreted protein MPB70 precursor-like
MDLTTLRAVLWDLRPKLLPSRFEKAQQPGPATIQLGCRSLEGMVWLELSW
QADAPRLVEVNPPPRSGSGSTFAQQLQHSLRQLALVELHQSGFERVVEFR
FAQRPGEPIQRVLVLELMGRHSNLLLLDEQRRIIALGRQVRDHQSRVRPL
STGDSYSPPPMLQGLAPDRTEGFERWRERLSLVPIPLRKALQQTYQGISP
ALALQLAGDHVNTPVDSLDARHWNHLFERWSLWLDQLEREQFALVVENDG
RYRVWGSPRGEVHPQPALALTLGSLHQHCQEQRALARVSHDLRQRLERWR
SKEQSAQEDQHQRLSATDGHGALQRQADALLCLGNPSRDQVDEAQSLYRR
AKKLRRSRPILEQRLEHHQQRLELISESETFIEDQLSATWQDGSARLSAL
NDLREELDELLQPKERRRSTRQQRQRDQPKPLELTTPGGLKVQVGRNHRQ
NDWISLRQARSGDLWFHAQECPGSHVVLKSSNGLAEESDLSMATDLAAYF
SRARGNTRVAVVMVPTDQLQRIPGAGPGTVRHGQAEIRWGDPQGAEERLL
APSLSPHSG
>Syncc9605_2520 DEAD/DEAH box helicase-like
MSLLHATWLPAIRTSSSSGQPALLVWADTWRVATPEGPGLTPALHPFTLS
HEDLRAWLSERDLLPGGCIDATACLTLPSRTVKLRKSRSTKEEPTPEPPG
WTGLPMQAGEPIPKQTEWWPWQVQGLAVEPSAATEWLSRLPLSGTNPDLA
DELRWWSHLQRWALSLVARGRWIPQMEFSKGEGYPHRARWVPLLNREEDR
RRLEDLAASLPLVATCALPWREPLGRRSNRTTRLRPEAMRAANPVASCRP
RSGRLRVATLLEDLVDAQLRKDFEPSTDGLDPLLTLWQEALGSETGVIEI
GDEEAERLATASHHWREGIAGDFAAARTCLELHTPPDGEDLWELRFGLQA
EADPSLKLPAAAAWAAGAEPLQLGEIRVDQPGEVLLEGMGRALSVFPAIE
RGLESATPETMQLTPAEAFVLVRTAARQLRDAGVGVELPPSLSGGLASRL
GLSIKAELPERSSGFTLGECLAWEWDLMIGGVTLTLRELERLSGKRSPLV
RHKGAWIELRPNDLKNAERFCGAKPELSLDDALRLTGTEGELLMRMPVHR
FDAGPRLQSVLQQYHQQKAPDPLPAPEGFSGQLRPYQERGLGWLAFLHRF
DQGACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWRRE
AESFTPELKVTEHYGPRRPSTPAELKKALKEVDLVLTSYGLLQRDSELLE
TQDWQGVVIDEAQAIKNPGAKQSQAARDLARTGRIKSNRFRIALTGTPVE
NRVSELWALMDFLNPKVLGEEDFFRQRYRMPIERYGDMSSLRDLKGRVGP
FILRRLKTDKTIISDLPEKVELSEWVGLSKEQKSLYSKTVEDTLDAIARA
PRGQRHGQVLALLTRLKQICNHPALALSEGAVDDGFLGRSAKLQRLEEIL
DEVIEAGDRALLFTQFAEWGHLLRAWMQQRWKSEVPFLHGGTRKNERQAM
VDRFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATD
RAYRIGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDVIGSGEDWLGS
LGGDQLRDLVSLEDT
>Syncc9605_1348 possible type 3 alternative RNA polymerase sigma factor
MLLSAKAGDAANKHSLDKTCLKRRNRQIHDNLHMVRPIARHYAQQTGLES
DDLLQVGCLGLIKAYNRYEAKRGAPFPSFAKPHIR
>Syncc9605_2066 DNA-directed RNA polymerase
MTNSNLRTENHFDYVKITLASPDRVMEWGQRTLPNGQVVGEVTKPETINY
RTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESR
VRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVV
LDPGDHKDLKYKQLLTEDEWLEIEDEIYAEDSEIENEPVVGIGAEALKQL
LEDLTLDEVAEQLREEINGSKGQKRAKLIKRLRVIDNFIATNARPEWMVL
DVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR
QNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQN
IVNNIKAAKKLIQRADDEVMQVLQEVIEGHPILLNRAPTLHRLGIQAFEP
KLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLMLASNN
ILSPATGEPIITPSQDMVLGSYYLTALQPGASKPDFGDRSCTFAGLEDVI
HAFEDNRIGLHDWVWVRFNGEVQDDEELDAPSKSESLSDGTRIEEWSYRR
DRFDEDGALISRYILTTVGRVVMNHTIIDAVAAA
>Syncc9605_2596 possible type II alternative RNA polymerase sigma factor
MPSKPRRTGGTRERRSSGTTDLLRLYLQDIGRVDLLTNEEEVTLARLVQR
REALLSQQQKLAESDAAIGELHRLEELQRREANQHSHWPTKQEWARAADL
PLPELQQRIDRGYQAWAEQAQLEAKDLKLALRNGRRAKDHMIQANLRLVV
AVAKKYQQRGMEILDLVQEGTLGLERAVEKFDPTRGFRFSTYAYWWIRQG
ITRAIATQSRTIRLPVHVTEKLNRIKRVQQEIASNEGRIASIADLARELG
ISEDTVRQTLARVPRSVSLDTRVGREQDTQLGDLIEDGHATPEQTLTHDE
LHNDLEHLLDELTSREAAVLRRRFGLEDDTPQTLAQIGEELKLSRERVRQ
IETRALLKLRQPQRRSKIRDYIQSLDS
>Syncc9605_1288 DNA-directed RNA polymerase specialized sigma subunit-like
MNSWISSTDPLISQRHLRHESRRVLPPYIARRNQQALEHLGLAHCAARRQ
QQRGPEEFDDLLQESRVGLIRGVDRFDPQRRVKPSSYLLSRATGQILHYR
RDRSRMIKVHGGCVLYAAGMKIQREREQNTQPSLSDLELATALSVLPERW
SEAVKSHGVSQVVDLSASPLEPTQACEVDEHLD
>Syncc9605_1080 hydrogenase accessory protein HypB
MHMPLEDTLGLNLLAANNHQAEHNNEHFQSWELLCLNLMSSPGAGKTALL
ERSLPALARELSMAVLEGDMTTQLDADRLETVGIPVVPITTGRACHLDAA
MVSGGLKLLQQRLDPSALDLLLVENVGNLVCPAEFDVGEHHKVALLSVTE
GDDKPLKYPLMFRNADLVLITKVDLLPHLPVDVAAIRRNIQSINPNATVI
EVSALTGEGLDAWHIWVRQVLASRTTTTPALATA
>Syncc9605_2565 sigma-54 factor
MKSCSVLDPSASLLLLSPYATGRPHRGVVGASRYAQRLRQDLINAAEDPN
NRTLMIRGEPGLGKNNLAALVHFGSNQRRKLLVRLDATDLKTKADVLLDA
IGENTLLVSSVDQLDPELQQRLAAMANGEHPGFSGRVIFTSESCVPSLDA
ISQVIRVPPLRVRRSDLGDWLRYQLRLQSPGLGWVKPPALPEAVVRRLQN
HDFADNLRELEGLVNRALRQARRQNHDLPPAVLVEEMFWTEQRKERARFD
LWRWKPQLRGWMRAPKLWDGLLFGLVSWLFVVVNLVLWLGPQDRAANPML
NLFWAWWWPLILLSYPLVGRLWCAICPFMVWGQIAQKLTPWRKKSWPHGD
MDRWGAPVLAAGFAVILLWEEVWNLENTAWLSSCLLLLITAGAVVGSLLF
EKRFWCRYLCPVGGMNGLFAKLSILELRAESGTCSGSCSSYACFKGGAAD
GEGLETNGCPLGSHPAHLSDNRNCVLCMSCVQACPNRSPQLRLRPPAADL
QPNMHTPSSERGLILVLAGGICLHHWQRLLGWLPLAPSSLHEGPLLARLS
FAVLALALPAAIGLWLNHRWLYAGLPLLWALLLARHLPIGMAEAGTVLPH
GWPQWSADPHVIGFCQTLVVGIGWIGAAILSRRLLDLDSRAWVMGSMVLL
LVSFSGRWLVAL
>Syncc9605_1612 cell envelope-related function transcriptional attenuator common domain
MNWLSPPRVRGALCVGAAVLGIGVTGWLLATLWPKPDRVAADAPLSSDQS
VTLAPFPEAPVTVLVIGVDGDRLGAASNQAAPQGPANADALLLLRIAAQE
PLQVLQIPTELGVQLPGEENPGRLAQLWRQGGVSLLSDAIRDIVGLQEGD
PKRYVVVPRAALRRLVDGLGEVEVVLSESYKRQDKTQDYTVLLQAGRQRL
NGAQAEQLVRHLPDPKAVSQRRQRQNILVEGLIEQVKDPSGIGMIPGLVN
QLNLELETNLSRSEQLSLAAALIASPEPARISRLPLAERAGERTLRQIEA
SASRPLWPQP
>Syncc9605_1561 putative ribosomal-protein-alanine acetyltransferase
MLEIRPFTPADLDVITALAREQDFAPGIGDIEIYANTDRQGVWLAWHDNT
PVGCIAAVTYNPDYAFIGLFVVKPEHRGQGIGRRLWQHALKTLSGVQCIG
LEAAVQMVGFYERAGFQKDCITTRRQMLFRSEATLDLSPSQRSDVAVVPL
REVSLDAIQRYDERHEISPRPHFLELWLRHRAGDVFAARDAEGECHGYVR
IRPCLMPIGEGWRVGPWLAEDPGMASLLLNNALDHHNGVVLIDTPGHNPS
AKTILSARGFKPMTSTVRMYKGVIPKGHDRNVYGLACLELG
>Syncc9605_2398 putative Rubisco transcriptional regulator
MADLPFTLDQLRILRAIVSEGSFKKAADSLYVTQPAVSLQIQNLEKQLEV
SLFDRGGRKAQLTEAGHLLLSYCDRILSQCHEACRALDDLHNLKGGSLIV
GASQTTGTYLMPRMIGLFRQKYPDVSVQLQVHSTRRTGWSVANGQIDLAI
IGGELPAELNELLQVVPYASDELALVLPVKHPLARLAELTKEDLYRLGFV
CLDAQSTTRKMVDQLLARSGLDVQRLRIDMELNSLEAIKNAVQAGLGAAF
VPVVSIERELSAGTIHRPQVADLQVRRQLKLITHPARYCSRSSVAFRNDV
LPVFASADSPIRQAAKVVPEAIGEQLVQN
>Syncc9605_0010 NusB family protein
MATRSLTRELALLVLGQVPEQRSASVADLALDSILDQALDTLTQHWRESL
DASAAELDQAQQSLLDSELQQGEPGTHDTVRTHLRASLSSAEQVLNGLSA
SLELPRLLLLGDQEQIRRGAMERVQKVLTQREGIDKRLDQVMEGWRLTRL
PRIDRDILRLAVVDLESLRTPAPVAFNEAVELANRYSDEQGRRMINGVLR
RFHDAQSKASA
>Syncc9605_2067 DNA-directed RNA polymerase, beta subunit
MSSSAIQVAKTATYLPDLVEVQRASFKWFLDQGLIEELESFSPITDYTGK
LELHFIGSEYRLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQ
EVFIGELPLMTERGTFIINGAERVIVNQIVRSPGVYFKDEMDKNGRRTYN
ASVIPNRGAWLKFETDKNDLLHVRVDKTRKINAHVLMRAMGLSDNDVLDK
LRHPEFYKKSIDAANDEGISSEDQALLELYKKLRPGEPPSVSGGQQLLQT
RFFDPKRYDLGRVGRYKINKKLRLTIPDTVRTLTHEDVLSTLDYLINLEL
DVGGASLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETD
SLTPAQLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGP
GGLTRERAGFAVRDIHPSHYGRLCPIETPEGPNAGLINSLATHARVNEYG
FIETPFWKVEYGVVLKDGDPIYLSADREDEVRVAPGDVATEDDGRISADL
IPVRYRQDFEKVPPEQVDYVALSPVQVISVATSLIPFLEHDDANRALMGS
NMQRQAVPLLRPERALVGTGLETQVARDSGMVPISRVNGTVTYVDANAIV
VQDEDGNDHTHFLQKYQRSNQDTCLNQRPIVRCGDPVIVGQVMADGSACE
GGEIALGQNVLIAYMPWEGYNYEDALLVSERLVTDDLYTSVHIEKYEIEA
RQTKLGPEEITREIPNVAEESLGNLDEMGIIRVGAFVESGDILVGKVTPK
GESDQPPEEKLLRAIFGEKARDVRDNSLRVPGTERGRVVDVRIYTREQGD
ELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRILPREDMPYLPD
GTPVDIVLNPLGVPSRMNVGQVFELLMGWAASNLDCRVRIVPFDEMHGAE
KSQQTVETFLKEAAKQPGKGWVYDPEDPGKLQLRDGRTGLPFDQPVAVGY
SHFLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALE
AYGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPRPGTPESFKVLMRE
LQSLGLDIAVYTDEGKEVDLMQDVNPRRSTPSRPTYESLGVADYDED
>Syncc9605_2406 transcriptional regulator, LuxR family
MSSLDGTDPLEISLSAREIEIIELVAEGLTNQEIADRLTISKRTVDNHVS
NVFTKTGSKNRVALLNWAMDNGKICRDGFNCCVLPEHDPPSA
>Syncc9605_1618 two component transcriptional regulator, winged helix family
MRLRAEWACPCHVDVTTLSASVSTRRLLVVEDDDSIRETVGEALRAEGFE
VHTCADGASALTLITAGSSDPVDLIVLDLMLPGLGGLDLCRELRRLNNTT
PILVISARDSETDRVLGLEVGADDYLVKPFGLRELVARCRALLRRSSQSE
TSPSQPHSFTHANLCLFPSECRVTRDGTDLTLSPKEYKILELFIQNPKRV
WSRDQLLEKIWGVDFIGDTKTVDVHIRWLREKVEQEPSSPQLIRTVRGFG
YRFG
>Syncc9605_0179 conserved hypothetical protein
MSSISQPIPIFIGYDPRERAATNVLIDSLYQNSSVPLAITPLVTPQLEAQ
GLFRRERDPKQSTAFSFTRFLVPYLMGYEGWALFMDCDMLCRADIKALWD
QRDDAYGAMCVQHEHVPGETVKFLGEVQSPYPKKNWSSLMLLNCSRCTKL
TPDYVNTATGLELHRFHWLEGDHEIGAIQGGWNHLVDVQAPPESEQAAPM
LHWTLGGPWFREQRTMGGPLAAEWFSARDDAMKLWD
>Syncc9605_1648 DEAD/DEAH box helicase-like
MSLISEINQAKPPFMTEQQQQRDDSACAVDLSASELPEANSNAEVFTTTI
TSAEPESGFAGFGFSEALLRTLADKGYSEPSPIQKAAFPELMLGRDLVGQ
AQTGTGKTAAFALPLLERLESGQKTPQALVLAPTRELAMQVAESFKAYSA
GHPHLKVLAVYGGTDFRSQISALRRGVDVVVGTPGRVMDHMRQGTLDTSG
LRSLVLDEADEMLRMGFIDDVEWILDQLPEQRQVVLFSATMPPEIRRLSK
RYLKDPAEVTIRTKDQEGKRIRQRSITVPMPHKLEALQRVLDACGSEGVI
IFARTKAITLTVAETLEAGGHQVAVLNGDVPQNQRERTVERLRSGSVDIL
VATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFV
TPRERRFIRNLERATGQPIEAMEVPGNTAINQGRLDRLRKRLSDAAQSQR
PDADEAALLQELMQRVATELELSPEQLAMAALNLAIGPDALLRKGDDDWI
QNTRRNDRDRDRHSGDRRERRERPARAPEENMQRYRVEVGHRDRVKPGNL
VGAIAGETGLQGRMIGRIQIFDNHSLVDLPKGMPEDVFNSLQRLRVMNRE
LQISKAS
>Syncc9605_2455 metal dependent phosphohydrolase
MGCALPEVRRHPIRHPDDYGIALPEWLRECIANVPPGIGQSCPTDAEALL
VSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHD
VVEDTDVTPDQIELHFGSEVRELVEGVTKLGGIHFNDRTEAQAENLRRMF
LAMASDIRVVLVKLADRLHNMRTLGALKEEKRQRIARETREIYAPLANRL
GIGRFKWELEDLAFKLLEPEAFREIQEEVATKRSEREQRLGVTVGLLNER
LERAGLDHCEVSGRPKHLFGIWSKMQRQQKEFHEIYDVAALRILTPNVES
CYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHRPIEVQIR
TLEMHHVAEFGIAAHWKYKEGGSPASSSSDAERFNWLRQLVDWQQEGGND
DHNDYLSSIKEDLFDEEVFVFTPKGDVLGLRKGATAVDFAYRIHSEVGNH
CHGVRINDRLCPLPTPLQNGDFVRVLTSKTAHPSLDWLNFVATPTARNRI
RQWYKRSHRDETIERGKDLLERELGRDGFDALLNSEAMQRVAQRCNVPTT
EDLLASLGFGDVTLQQALNRLREEMRLLAEQQQAPPSNEDVAAALVPSRD
PAADRSVGAGAILGLEGLDYRLGGCCSPLPGELIVGTVALGNHGITIHRQ
DCSNVETIPRERRLPVRWNTAHAEQEKQRFPVQLRIEVIDRVGILKDILL
RLSDGAINVSDARVTTAAGKPARIDLRVELEGADQLSRTMDQIRSMADVI
GIARVGTS
>Syncc9605_2417 heat-inducible transcription repressor HrcA
MSKPLSLRQEQVLQATVHHYVDTMEPVGSRTLVQRFGIPASSATVRSAMG
ALERRGLLHQPHTSAGRVPSPMGYRHYVDALLPEPGVAVQHLDRELTGFS
LRWAGLDDLLMHLARRLTDFTGLMSLITQPQQENQQLETIRLVPSGDRLL
VMLVEANGRASHLNLRLPHGAEAELTAMECWASAQLEQGDLNWDALPRQL
QRSGAVLRNALDQPAPANSTQVVVHGLSRLVSEPEFESTSSLRPLLELID
DQPATLISRGESARVWIGDEHPQPALEACAVVQAPYRCNEGLGHVALVGP
MRMAYATARAAVQRVARHLELLLA
>Syncc9605_0079 conserved hypothetical protein
MTPIRLVHHAPGAPGLRWLGLGPDLRPSRALLKLQRLFDRHAFWARGRSF
SQLRRLLAGSDAVVSLWRGKRLVGFGRATSDGFSRAVLWDIVVAGDLQGH
GLGRRVIEELLHTPPVVGVERVYLMTTKSAGFYRQLGFQDANPQQLMVLR
R
>Syncc9605_0681 Sigma-70 factor
MKDVAKGSEKEAKKAPARRRTSKASAKDLNAAADELLAAADQAKASGTTK
KAAAKSTKAKTTTKKATTTKKAATTKKTATKATTAKAAAKPTAEEKAKTA
AAEKEAKAKALASIKIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELAR
KIADLLYLEELAAQFESDNGREPDNKEWAALVEMPLIRFRRRLMLGRRAK
EKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK
FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGR
KPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD
IENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIG
QIFDVTRERIRQIEAKALRKLRHPNRNGVLKEYIK
>Syncc9605_0012 serine phosphatase
MSSKPPGRHPSSAQRTGNPSPEAMASLRQLFDSLSSEQRRNQDLLVSLGF
ALRSFTNLQRFLELVPVVASRLVGVEGALLVPFQSDGRLWRDQLQGSPAE
LSQDLLQRLAAFEPGSAVGFGSDDQQLLALDRLVQRCLPKAALFATSVTA
RGRTRGRLYVYARNGALVWTEVHRRHVQLVADLAGVAIENDQMLQDARRH
ERVDRQLSIGAEIQAQLLPDRCPVIEGVDLAARCRPAFQVGGDYYDFIPT
RPELIGRRRERGRWALVMGDVMGKGVPAGLLMTMLRGMLRAEVLSGLPPD
RILHDLNQLAQEDLAQSHRFVTLFYSDLDPRTLRLRYANAAHNPPLLWRA
ERRVIMRLDAAGLLIGLQPEAEFALGEVRLEPGDVLLYYTDGVTEAPGIT
GDRFDEARLIRALETACRSGQGAQGILDSLFERLDRFVGPDRQLEDDASL
VVLKVPEAVTLPIVQVRTIA
>Syncc9605_1314 RNA binding S1
MKFTVADLLDQLSTEHPSESDQLAKILKLSNKTDKAALELAVSSLMKIGV
IEQTSEGGLTRPQESDLIDARLRCSSKGFCFAIRDDGGEDIYIRDHQLNH
AWNGDRVLVLVTREGGRRRSPEGGVQCILERATQSLLAQVEQQSEQLLAS
PLDDRVLAGIELPAEDAKHLPGDEVSSVVEVRIDRYPVAQHAAAGHVVRS
LPLNGGPAADRDLLLTKAGLQDRPAAPRSSGKTPAAKGRVDLTDQPSLLL
KGWSQEDAPGLPAVHVEPKDGGCRLWVHVPSVGERIGIGNSLEACLRDRG
EALCLGEVWQPLLTPSLNKVTSFSAGSEADAISVRIDLAANGEATDWEFM
LSSVRPVADVSADQLIALAERKPKARSIPAALKPIKDQLGQLETLRFCST
LLLEHERSSGVVQLDLCPPQLEALGDLRSADPSGLRHRWVDAFNPVDPHA
FLQPLLRAADRAWTAQRLDLQLPGITIEADEPDGSVLTDVAKTAIALDLP
LELDDDGCPSASELIQVFKHSSQRRVLEQQLSHALPPLSLVASIEASSAA
ADSDGEDAAPIRPNTSLTPWTCATQHYAHLVNQQVIVALLTDAKDRPTVR
HKTRLKLGLKGAGADLTWPLFTASQDEKLNGLVNERTVQRLNTRRRQVLE
LEKDLLSMIQARSAQPLIGEQVEGRISGVQSYGFFVEVGESRVEGLVHVS
SLNDDWYEYRSRQNRLVGRKNRQTYQLGDAVQVRVINVDVLRNQIDLEVI
SQASDASSEPESSEPLPVALSER
>Syncc9605_2378 two component transcriptional regulator, winged helix family
MKPCILLIEDDQDMRDLVSGHLEHSGFDVQRADDGIKGQALALQYTPDLI
LLDLMLPKVDGLTLCQRLRRDDRTAGIPILMLTALGGTKDKVSGFNSGAD
DYLTKPFDLEELQARVKALLRRSDRAPVGSTNHNEILSYGPLTLVPERFE
AIWFDQPVRLTHLEFELLHCLLQRHGQTVAPSLILKEVWGYEPDDDIETI
RVHVRHLRTKLEPDPRKPRFIKTVYGAGYCLELPTSAQMDGLEDVVAMAR
EERKQQGDRASA
>Syncc9605_1663 two component transcriptional regulator, winged helix family
MTSTPHDLTAEASAARTDPVVMPSSTNGQEPSRVLVVEPHPTLRTVLVQR
LRQDGHLTAAVASAAEALEVCQEQSPDLLVSAELLERSSALRLAEQLRCP
VIVLTARAGAEPVVGLLDDGADDVLRKPFGLEELAARCRTLLKRGHSGLQ
ERVTVGPLEVHLLLRQVTLREQPVELSPREFALLCALLMPPGLVRSRQEL
LRMAWPPFSGGPRSVDTQVLTLRRKLEQAGLGEGGGITTVRQRGYRFSLD
NLPAS
>Syncc9605_1000 possible type II alternative RNA polymerase sigma factor
MMTSSLSAFLGEIGRHQLLTPEQELMMGRKVQAMVAITERCHLAGGSGPA
CEYSDEEKGVIRRGERAKNQMITSNLRLVVNLAKRYQGKGLDLLDLIQEG
TLGLTRAVEKYDPTRGHRFSTYAYWWIRQGLNRALSTQSRTIRIPVNVNE
KLTKLRAAKARLMQRNGLSPSGEQLAEFMEIPIAEVEDLLACELRSVTVS
LQGVVKSKSDPSELVDVLPSDELPPMERAEIAERTASVWSLLAKANLTPK
EHTVVTLRFGLDGTNEWRTLAEVARHMNCSREYCRQVVQRALRKLRKTGI
QSGLVESTL
>Syncc9605_1536 response regulator receiver domain protein (CheY-like)
MVACCGDRFTLTCLCLAEPIRRAGVGAATTEEEGLELVLRHKPSLLICTS
DLETGYGMNLLRRVKAELPTCQLLIVLVRETQAVVQEAMQAYADAVIFKS
SLGTGKGDFVQALQTLSEGGVYLPEEIRQLGAAQAPNPTCRR
>Syncc9605_0083 transcriptional regulator, GntR family
MRFHIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHR
NTISKVYRQLETDGVVEAMAGSGIYVRDQQKPREIKTPPHIRNRGVTDLD
REVRKCVDGLLNAGCTLQQTRELLTREIDWRLRCGARVLVSTPREDIGAS
MLIAEELEPCLDVPVEVVPLEELESVLENSSNGTVVTSRYFLQPVEELAK
KHSVRAVAVDLNDFRQELAMLKELRPGSCVGLVSISPGILRAAEVILHSM
RGNELLLMTATPDVGSRLLALLRASSHVLCDRPSLPLVEQSLRQNRSQLM
RMPQVHCAESYLSTDTIDLLRKEIGLQTPAAAS
>Syncc9605_1336 probable ribonuclease II
MNNSIQPGDTVAVVLKGSPLFGRLLSIKGSKAVLSFGGQRRDQGLPLRDL
IAIDPEHRFANSALPAPEQVQDSAPSARALLEAWQLLETDQPGGLARLRL
CDFGELVLTPFNLAGLAALWAWLHGNQQLFRWRRDRLIQPLPRGERDSLR
RQRRAERQAQQHEQRQLALLRAERALSDDERLELDPVWDEQFRHWIQLLK
DNPAAVGSDLDLQQWSAALSIGSDAADLRQWLIVRGLLDPNEPIGLRGSV
WSRRFPSDLMEEANRLVALSEEELPADEQRIDLTHLATYSLDDAGTREID
DALSLERRDGVNWIWIHIADPSRLIDIDSPLDQEARRRATSLYLAEGVMP
MLPLELAAGPLSLRAGQRCAALSAAVHLDADGAVVEQRIARSWIRPRYGL
TYGDGDELIELAPPGDEALSDLSGLLMQRMRWRRSKGAVMFDRPEGRFRR
SDGSLTLQVIDPSPSRLMVSEAMLLMGAVVASFGQKHNLPLPFRSQPAAE
LPSSDELDRIPEGPARDAAIKRCLSRGVQGTRAMPHFSLGLEAYVQATSP
IRRYADLIAHRQIIAQLSALEPMDEERLGEVIDDLDDPLRQSIQISREDQ
RHWQQVWFAEHHNTVWTAVFLRWLRPQDRLALVHVSDLAMDLVGFVSADD
PCPGDVLELKVGRADPVRGELQLQLA
>Syncc9605_0879 type II alternative RNA polymerase sigma factor, sigma-70 family
MSTASKPLETQRRRSSDPVSWYLATIGRIPLLTPAEEIELGNQVQAMMAF
TEDGSREIEDGELTTAQRRLLRIGRRAKERMMKANLRLVVSVAKKYQGKG
LELLDLIQEGSLGLERAVEKFDPTRGYKFSTYAFWWIRQSMTRAIACQSR
TIRLPVHLSERLTTIRKVSLDLAHKLGAMPSRVEIAEAMDIPLDELDSLL
RQALTTSSLDAPVNGEEGRSFLGDLIADSSLDEPLDIVEQRIHHEQLGRW
LSHLSEQEQHVLRMRFGLEGNERHTLAEIGRLMEVSRERVRQVELKALRK
LRNLTRRLPSGI
>Syncc9605_0785 DNA-directed RNA polymerase
MTSSWVTAKQSKTTSLGWWDEAAGLLPQPHLFFQLKDLEVSYDHVSFVAL
RKLIDCIHTKQNQRTHVCTAIGKAIQEELRNQFFTLNLDEDGKKIRDKRL
KKPRSTPKYRNLGVKLSMERRLLEKGWAKDDLYQDWPSLLCTQFGSLLLD
AAVKERYFEVPTKWVAKNRSEKFVVPSPALEEHLTKRTEQIDELVTTQEV
LIEPPLDWQLQDGEARFNFSGGYHLPTTRKPNNPLCRGRHYSTRFGSDAI
NLLNTLGRTAFQVDPQVFEVIDDCWDKQHSIAGFNSPFENPQLNQEMPEH
LKALENKHPDRVAWRKRQAYLHELEQKHIEKTLSVQAVLFSARKNLTRPR
FWLSWSCDFRGRIYSQQSWLDPQSRDFERSVLRFADGCRLDEQGKEWAAR
AVGAAFGGTKQSFASRSQWTYDNAELIAAIASDPIRHSSQWENAEEPWQF
LQLAMDWNAVVLQQTKPLWQVPVSVDSTASGLQLLSAMRRDPVGMKWTNL
IPSEDPD
>Syncc9605_0384 conserved hypothetical protein
MLEAQAHHQIKTLLRQEESDWPHHLTLSRLVARSLRRRDTTLVQLPPSSS
ERWWLGLLVPLCLAPEAGALVLTPPQRRRLLQLELPRLRNQGLRLPCWQG
STPPEGPQLWLMDVGELIQAHRDGHLGTRQLLIPEMDQLSRRMRNALTFE
IEHQHWDELRQASPQAESGLLELHDRMSRQLFADATRPGGAVRLEGSAGQ
ALRDLLQLLPASPEPWNTLRSINPAEWSQWAELDHRLLQWRWKLAPLEPL
QLLRGVLLDHPCLMFSSNGDNARLDLEFEQAGVVPDVRASLRERELNEPL
PLYAPRRQPLPNTRIYAQHLLEESRRLILGQAGLTLVLINDDQLRRQLTS
SLAAEFGRRVLHESTAPESNGVVTCNWDWWLEHQEQLPAPAQLIVAMLPI
ASLDNPLTSARVERLKQQGEDWFRTLLLPEALSLIPAAIAPLRRSGGRLA
ILDGRLRGRSWGDQVLHRLEPWIPLQRLLPD
>Syncc9605_0969 possible acetyltransferase
MIAPLPMPAEPLLEQYGQGARLCPCANDQITLVFSQEYPFDLVELEQLLE
AVGWSRRPIRRVRKALSHSLLKVGLWRHDPRVPRLVGFARCTGDGVFEAT
VWDVAVHPLYQGNGLGKQLMAYILEALDQMGTERVSLFADPGVVSFYQGQ
GWDLEPQGHRCAFWYAN
>Syncc9605_0915 two component transcriptional regulator, winged helix family
MNADPLLLLAGSSAVALAPRLAASGYATLDWLSAGPSAHAAEPGESPLAA
VLAADQTALIQDLRSRFGAMPILLDLERDSVEARADCLGTGADDFWLSEI
GPSDLLLRLRLHRTIQQRSGQRPVLLQIDDLSVDPTNRTVRRGERVVALT
AREFMLLQVLLRRRGQVLSRELLLQEVWQGERSSSNIIEVYVRYLRQKLE
AGGERRLLHTVRGRGYCLGQVLPKA
>Syncc9605_2472 NusG antitermination factor
MPDDLTTPDAPEVLDLPAPNEGEDSTLPAAAVANTAIARWYAVQVASSCE
KKVKATLEQRAVTLGVSNRILEIEIPQTPAVKLKKDGTRQSTEEKVFPGY
VLVRMVLDEDTMMAVRSTPNVINFVGAEDRRATGKARGHIKPRPLSRSEV
DRIFKRAAEKKTVVKVDLTEGDQILVTAGPFKDFQGEVIEVSGERNKLKA
LLSIFGRETPVELEFSQISKQN
>Syncc9605_1179 putative SOS mutagenesis protein UmuD
MELQHRPLPLQPKRSRLTLPLAGERVAAGFPSPADDYVDVGIDLNEQLIR
HPTSTFFLHVSGESMTDAGIHDGDLLVVDRSLDPRPGQVVVAVLDGAFTL
KRLMHHRGRLRLEAAHPDYPPLELHRCGEVQIWGVAIHVIHPL
>Syncc9605_0556 hypothetical protein
MVMDVVVKEGIVAGDCVLLSCGDSAQLLKVSDVDGCQIQLDGEVTSVDGE
WCKVRVQLESKHGIFGRQPITTVLTTRLKTVELTDRVHVWNQLKAKSIDR
VRRTGTDECEFWAPLS
>Syncc9605_0149 Ribonuclease III
MDPSRAAELTDLIQRLDAEIPIEPELLILVDQAMTHVSSGRDRNLERLEF
LGDAVLRLAATEFIDRHHADLTVGACSNLRAQLVSDRWLADVGEALGIEE
HLLLGRHAQGDRSARSRLRADATEALIGALYTALGNLKAIHRWLTPHWSA
TTQAVLATPHQFGGKTTLQEWSQGQGLGLPRYATEECSRQHGDPERFRCQ
VSIQGRNLAEAKGRSRKEAEQNAATAALQALEGSDAPQKSQ
>Syncc9605_2661 conserved hypothetical protein
MALRPIAPEDQPLLREIYADAIESQAPLLYSEEQVRAWAALAWLPGVLDE
SFREGSGWLTTDGSAFAIRHPEDRLSLLYCRGCASRRGHGSALLNQIEAD
ALASSVRQLRTEASQFSRPLLERRGWEVEAPETILIGGVPFERYRMVKLL
RQVQS
>Syncc9605_1025 ROK family sugar kinase
MPDVQVIGVDLGGTAIKLARIRADGTVMAEAQCPTPQPAVPGAVTMALCE
AIEQIDPGHAAQAVGIGLPGPMDASARVARVCINLPGWEDVPLADWLESR
INRQVTLANDGNCAVVGEAWLGAARGVEDVVLLTLGTGVGGGVILRGELL
TGHNGAAAEPGLIGVQPDGPACNSGNRGSLEQFASITGLRRLCDRDPREL
SAEADAGDPAALEVWTLYGERLGCGVASLVYVFTPQLVLLGGGLAGAARH
FLPAVRREVESRVQAVSREGLRIEAACLGNGAGRLGAARLALQRLNGMMA
PD
>Syncc9605_2080 conserved hypothetical protein
MSDRPVLRRCVACRQLLDRRQLWRVIRDHQDGVRLDEGMGRSAYLCREEN
CLQEATRRKRLQKALRCQVPETVLAVLKQRLNQSVGESAEAD
>Syncc9605_1225 ATP-dependent DNA helicase RecG
MLPIQRSLGLEADRGFQNLQGRQQRFHAFLQQQLAAPPALPFPQEVSERM
SKLSSGFADYPNLADPARRRLVTDARQWLHELRHRLEPSAPMAPPRLKVQ
ASPQQRTSSPLQLDSPITQIRGVGPKFAARLASIGLLLVRDLLRYYPRDH
VDYSAMRRIEALVSGETATIVATIRRCNGFVSPRNTNLAIIELQLQDPTG
RLKVSRFLAGKRFSSPAYLKGQQRLYPVGATVAVSGLVKDGPYGITFQDP
LIEVLDSPSSPVKSPSIGRLLPVYPLTEGVGADRFRSLIDQVLPLAASWP
DPLPALLQRQFQLPALSDSLQALHAPKDRESLDQGRRRLVFDEFLLMQLG
LLRRRQALRSRTGPDLDLQSSSSGLVGEFMDLLPFRFTAAQQRVFQEIEV
DLARSEPMARLVQGDVGSGKTVVAIAALLSTIASGWQGALMAPTEVLAEQ
HYRNLCQWLPQLHVSVALLTGSTPRPRRRELLDDLANGSLKVLVGTHALL
EDPVVFNRLGLVVVDEQHRFGVHQRDRLLNKGLQPHLLTMTATPIPRTLA
LSMHGDLDVSQIDELPPGRTPIRTRMLTAAKREKAYELIREEVQLGQRAY
VVLPLVDESEKLELRSAVEVHAELASEVFPDLAVGLLHGRLSSADKQAVL
TDFSAGKTQVLVSTTVVEVGVDVPEASVMVIDHAERFGLAQLHQLRGRVG
RGAAASHCLLINGSSNPLARQRLDVLVRSTDGFEIAEMDLRLRGPGQVLG
TRQSGLPDLALASLADDGAVLEDARTAAQELLKTDPELEQHPLLRETLDA
QQRRLSGGTPLN
>Syncc9605_0353 DNA-directed RNA polymerase, alpha subunit
MLQYQIDRIEHQVADDRAQSGVFLIGPLERGQATTLGNALRRVLMGGLEG
SAVTAIRIAGVNHEYATVPGVREDVLDILLNCKELTVNSRSAELEIGRLV
VAGPAEVKAGDLQFSSQVQVVDTDRPIATVADGHSLELELHVERGVGYRP
VDRHNEETSAIDLLQIDAVFMPVTRVNFTIDETAVAEGGSARERLRMEIV
TDGSITPDEALAQSANQLIELFQPLATVTLVEEVPAEPEPSAEAQIPLEE
LNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTSA
>Syncc9605_0469 Protein of unknown function DUF193
MPSGMQCPSCQNTDSRVLESRAADGGRSVRRRRECLNCEFRFTTYERVET
VPITVIKRNGNREIFSRSKLLHGLNRACEKTGLDTSRLESLVEELELRLQ
QRTGKEVSSTEIGEFVLRDLKQISEVAYIRFASVYRQFRGIDDFVSTLET
LNADQEQNHLATVR
>Syncc9605_0479 transcriptional regulator, LuxR family
MLLEGLNNRAIAQRLVISHRTVECHISRALRKNGCRNQLELVLWLISDQD
PALNRLAAGTMQPMPA
>Syncc9605_0406 possible Pex protein
MFSRRKPSRTCLADIEQYFHQPPPQFLDLELAVCWILECLLKDDNYPSGL
LQKLIREEPQLRLSETVLQQALEFLEQHGSISSYTQRCPSRGRPRRMLHL
ESDARGEAERLMQPWRSWLDSHRFALN
>Syncc9605_0109 two component transcriptional regulator, winged helix family
MTGDLPSQPKATILVVDDEAAVRRVLVMRLQLSGYRVICAEDGEEALEMY
HNESPDLVVLDVMLPKLDGFAVCRRLRAESCVPIIFLSAVEAISERVAGL
DLGADDYLPKPFSPKELEARISTILRRVGRGNAVIESRELPTGQGVLRLG
DLVVDTNRRQVTRGSERINLTYTEFSLLELLFRDPGHVVPRAEILEQLWG
YPPRRAADLRVVDVYVARLRGKLEPDPRNPELILTVRGIGYASQRMGEAF
AAG
>Syncc9605_0601 Twin-arginine translocation pathway signal
MNLWSERLGPLSRRHVLQMIGATGTALLAGCRPTTSAPTLMAPAGVLPKP
WADALPKPWRLTLAPAQQDWTPADQARADVLVIGDGWLDSHPADTLQPIA
SEPLVSQLDGQAKALLASLGALQDRVLPLAVSPWVMLLRDDPAMTQQGWP
LLLDSSLAGRVVLPASPRLVMSLADHLGGGQALPALRRQALTYDDRQVTN
WLLKGEAKVVVLPLSRCIALLGRDPRLRAILPASGAPLHWTVLLRPEASR
EPVPQSWVEQGWRDPLRRRLVQQGWRAPIASSGAIVDQNALSARLRPLLF
PSADTWLRCWSLPPLLPEDRSGLEERWRDSAPEPPSR
>Syncc9605_2427 two component transcriptional regulator, LuxR family
MSDAPTPTAESAEAVAPAPRLLLVDDEPGLRAAVQAYLEDEGFEVTTAVD
GEEGFAKAQQMLPDVVISDVMMPRLDGYGLLQKLRADERLGGTPVIFLTA
KGMTADRTQGYLAGVDDYIPKPFDPDELVARVRNVAQRQQRLLQEAARFA
DTDMGQMAKQITEIRSLLAQAEALPSTEPVVHSFTPREASVLQLVAEGLM
NKEIARQLETSIRNVEKYVSRLFNKTGTSSRTELVRYALEHRLVT
>Syncc9605_0593 two component transcriptional regulator, winged helix family
MELQRSSTPPHQFARQGEPQTRALHPFAIPFGLAPDKRRRPAFQILRSHR
SVKALEAGVDDYLIKPFSIDELMARLRAMHRRAETFSGLVGGPDVNEILK
VADLSMNTRTRDVMRGDRAIRLSVKEYDLLNFLMRGAGRVLERQEIMHGV
WGENFCGDDNLLDVYISYLRQKVELDDAPTLIHTVRGVGFILREQTN
>Syncc9605_1911 conserved hypothetical protein
MAVTVCQNCGSRRFRSDRSMGGRLVCQDCGTPAGSRAIRATPRSTRRNNG
KLWLVILLIAVIVLVVVTS
>Syncc9605_1847 putative transcriptional regulator, ArsR family
MIQNTLNREQSRQLLKALADPIRLNVIHALAQGERCVCDLTGDLNIPQSK
LSFHLRVLREAGLLTDRQSGRWIYYCLQPDALAALEAWLAELRRNCTQSA
APCPS
>Syncc9605_0140 conserved hypothetical protein
MSSISQPIPIFIGYDPRERAATNVLIDSLYQNSSVPLAITPLVTPQLEAQ
GLFRRERDPKQSTAFSFTRFLVPYLMGYEGWALFMDCDMLCRADIKALWD
QRDDAYGAMCVQHEHVPGETVKFLGEVQSPYPKKNWSSLMLLNCSRCTKL
TPDYVNTATGLELHRFHWLEGDHEIGAIQGGWNHLVDVQAPPESEQAAPM
LHWTLGGPWFREQRTMGGPLAAEWFSARDDAMKLWD
>Syncc9605_2664 type II alternative RNA polymerase sigma factor, sigma-70 family
MGIPLESSATTKQSSRKEPALPSTGRRPSTRQGGRLATDSIGFYLSSIGR
IPLLTAAEEIELAHHVQAMKQLQELPEEELTSRHRHKIRMGKRARDRMMA
ANLRLVVSVAKKYQNQGLELLDLVQEGAIGLERAVDKFDPAMGYKFSTYA
YWWIRQGMTRAIDNSARTIRLPIHISEKLSKMRRISRELSHRFGRQPNRL
ELASAMGIEPRELEDLISQSAPCASLDAHARGEEDRSTLGELIPDPNGEE
PMEGMDRSIQKEHLGGWLSQLNEREQKILKLRFGLGGEEPLTLAEIGRQI
NVSRERVRQLEAKAILKLRAMTNHQQAA
>Syncc9605_0038 DEAD/DEAH box helicase-like
MPSKPTMTCCLDLSPAGLVRVVSPFDAVTQSQLRRIKPRGRWIGPGHGWD
FPLAAAGALQQTLGRRFPVTAALQQWLDWCQHPLPPLPPHRTLVAAADLD
EALQDGRRPLRHQRSGVRWLLARRGAVLADEMGLGKTLTALLAARALMRC
AEVRLLVVAPVGLHPHWRRESEALGVELELVSWARLPDTLPPAGTLLVVD
EAHYAQSLQAQRTAALLRLARHPRLRAIWMLTGTPMKNGRPSQLYPLLAA
MDHPIARDQRQFEERYCQGHWREGRTGKRWQASGASQLEELRRLSRPLIL
HRRKQQVVDLPPKQRRLHPVMLSEAELTGFDHRVELVLDDYRRRARLGEV
RRDAEHLALLTSMRQIAAEFKLPAAQQLVESLRRQGEAVVLFSGFVAPLH
LLQQTLGGELLTGRQRPAERQESVDRFQQGQNDCLLATFGTGALGFTLHR
ARHVVLLERPWTPGDLDQAEDRCHRLGMGDGLTCHWLQLGAADQLVDGLL
ASKAERIEVLLGPRRFSLQRQSLSAMVGDCLQVL
>Syncc9605_1641 cell envelope-related function transcriptional attenuator common domain
MPQVPPAKASSVAMNWPVAAAVVAGLSGGLILSVPLSRLITAPSSTADEP
FALPQPAPLANPFAGWTGFGAREVVVLGRDRLGSNTDVIFTVRVDGTTTS
ITQIPRDSYIDAEGFGGIKLNALMAYGGVEAVEQELSRLMNRPIRHHIVV
RLDALETLANLVGGIEVDVPKRLYYVDRSQNLVIDLQPGPQLLKGKDLEG
FLRWRNDGRGDFGRLERQQLALKGLFEQMKQPQNLIRLPALITAAGQALE
TDLGPMELGGLITAMGTTDLQASSLKAVPFNADGISYLDTEWPANSSNGA
DSGDPNDRRFRFMF
>Syncc9605_2308 putative transcriptional regulators
MTGSERGGGRALLIGNSRWHWAQRQDNDVRVDHGPPEPGRIGNDPPIWAA
VAPVPESLMAHQDLRIRLEDVPLPKAPPWLGVDRALGAWMAWRCSQEQQL
DCSRGLLLVDAGTVLSLTRVTADGCFGGGQLIPGYRLQLQAMAEGTLGLP
STPEVPSNDALQEVFPQQTVAAMQRGVLEAMLASIAAAQQHAQGLLWICG
GDADLLKQHWTGATKLLQLEGDLQLQALLSLGAGLSSGRDR
>Syncc9605_1300 transcription-repair coupling factor
MPLRSLVTKLQETALTGELDERSIRAQRLLMRGAGRCSRALVASALAQRR
GAPLLVVVPTLEEAGRWTALLELMGWSQAGLYPTSEGSPYEPFDPTSEIT
WGQLQVLSDLLGDPDALSWAIVATERCLQPHLPPPDVLKTKTRTLRKGDQ
VDLEALGETLAQLGYERVNTIEQEGSWSRRGDIVDIFPVSSELPVRLEFF
GEELDKLREFDPASQRSLDPVDALRLTPTGFGPLIADQLRETMPDGLEPL
LGAEGTEQLLNGGTPEGMRRLMGLAWGQPASLLDYLPDTTTVVIDERRQG
LAHGQQWLSHVEEHHHDMAAEAGLDEGDRDRLWPAVLHREIEAAYALTEV
FHGFDMAELLEVDQHPNSFDLASRPVAAYPNQFGKLGELIKGFQTERTAV
WLVSAQPSRAVALLEEHDCISRFVPNAGDSNAISRLIEQNTPVALKVRGT
AELEGLQLPAWRIALVTDREFFGQQSLSSSGYVRRRRKAASRTVDPNKMR
PGDFVVHRNHGIGRFKAMEKLAMSGDIRDYLVVQYADGILRVAADQLGSL
GRYRATSETPPQLNRMGGTAWNKAKERAKKAVRKVALDLVKLYAERQQAA
GFAFPTDGPWQVEMEESFPYDPTPDQLKATADVKRDMERQEPMDRLVCGD
VGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIK
VALLNRFRTASERKSILDGLKQGTIDAVVGTHQLLSKGASFQELGLLVVD
EEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTP
PPLRRPIKTHLASLDPEAMRSAIRQELDRGGQVFYVVPRVEGIEEVAAGL
REMLPGLKLLVAHGQMAEGELENAMVAFNAGEADVMLCTTIVESGLDIPR
VNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNASLSDTARQR
LRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVQQSGQMETIGFDLYMEML
QESLAEIQGQDIPSVEDTQVDLPVTAFVPADWITDPDEKIAAYRAAADCL
TAEALVELAAGWADRYGALPAAVVSLLQLMELKLLAKRCGFSRIKPEKPN
IVLETPMEEPAFRLLRQGLPQHLHGRLVYQAGNGIQHKVMARGLGVLPME
KQLEQLMEWLRLMAAQIPDADGKTEAQRQEELRAKNAVVVQV
>Syncc9605_2104 two component transcriptional regulator, LuxR family
MRDLPQRHRPLLEGRRIVVASADRVLISGLVHSLNGIGSLVGAASTEAEA
LACLSHTAADLLICSDQLERGNGPSLVAAAKAQQPSLRCLMLIQRPLLST
IHAAAKAQCEGLCSHERIGNGGLLSVLRAMESDGSHMDSVIAGVANHDRG
SRDAAHPLSDVLSLREEDVLRGLCKGLSNQEIADQLHLSIETTKHCVTGL
LRKLDAKSRTQAVLIAFQRNLVDPPLPIPRWTP
>Syncc9605_1432 putative transcriptional regulator
MTSPSLPTRLEAILYLKGRPVSIGELAELADSDRRSVEEALVALTASYAQ
RDSALEIVEQSGRYGLQLRPGMGDLVKDLLPVNLSTATLRTLATIALKKR
ILQSDLVDLRGSGAYDHIKELLAQEFIERRRQTEGRSYWLTLTEKFHRTF
SVLPDLGTTDLTEAA
>Syncc9605_2384 two component transcriptional regulator, winged helix family
MWREVTNASVPMTATAPTKETILVVDDEASIRRILETRLSMIGYNVVTAC
DGTEALELFPTCTPDLVVLDVMMPKLDGYGVCQELRKESDVPIVMLTALG
DVADRITGLELGADDYVVKPFSPKELEARIRCLLRRVEKEQVAGIPNSGV
IQVSDLRIDTNKRQVFRGDERIRLTGMEFSLLELLVSRSGEPFNRGEILK
EVWGYTPERHVDTRVVDVHISRLRSKLEDDPANPELILTARGTGYLFQRI
VDSVASEGP