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2024-05-20 05:10:39

Gene list

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COG category: Transcription
Organism: Synechococcus sp. CC9605, CC9605

Number of genes found: 75

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Synechococcus sp. CC9605, CC9605
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Syncc9605_2080 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1902041 279 + 0.630824
NA Syncc9605_2621 urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS2433517 606 - 0.60066
NA Syncc9605_1839 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS1677242 768 + 0.61849
NA Syncc9605_0353 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS365087 939 - 0.604899
NA Syncc9605_0479 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; chromosome CDS465725 201 - 0.587065
NA Syncc9605_2066 DNA-directed RNA polymeraseRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS1886614 1905 - 0.606824
NA Syncc9605_0915 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; Flags: Precursor; chromosome CDS881891 678 + 0.635693
NA Syncc9605_1080 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS1019214 705 - 0.607092
NA Syncc9605_0406 possible Pex proteinSubName: Full=Possible Pex protein; chromosome CDS407964 384 - 0.596354
NA Syncc9605_0588 membrane-associated 30 kD protein-likeSubName: Full=Membrane-associated 30 kD protein-like; chromosome CDS570311 774 + 0.612403
NA Syncc9605_2065 DNA-directed RNA polymeraseRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1882478 4089 - 0.623135
NA Syncc9605_2661 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2470828 468 - 0.621795
NA Syncc9605_1911 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1732393 210 + 0.609524
NA Syncc9605_1179 putative SOS mutagenesis protein UmuDSubName: Full=Putative SOS mutagenesis protein UmuD; chromosome CDS1107185 432 - 0.655093
NA Syncc9605_0179 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS185574 711 + 0.600563
NA Syncc9605_1612 cell envelope-related function transcriptional attenuator common domainSubName: Full=Cell envelope-related function transcriptional attenuator common domain; chromosome CDS1481299 933 - 0.639871
NA Syncc9605_1847 putative transcriptional regulator, ArsR familySubName: Full=Putative transcriptional regulator, ArsR family; chromosome CDS1683981 318 + 0.628931
NA Syncc9605_1110 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1044841 669 + 0.578475
NA Syncc9605_2472 NusG antitermination factorRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS2276907 669 - 0.620329
NA Syncc9605_0140 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS136719 711 + 0.600563
NA Syncc9605_2406 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; chromosome CDS2218820 279 + 0.569892
NA Syncc9605_2427 two component transcriptional regulator, LuxR familySubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS2235668 738 - 0.661247
NA Syncc9605_1561 putative ribosomal-protein-alanine acetyltransferaseSubName: Full=Putative ribosomal-protein-alanine acetyltransferase; chromosome CDS1435838 876 + 0.624429
NA Syncc9605_2384 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS2198346 780 + 0.608974
NA Syncc9605_0469 Protein of unknown function DUF193RecName: Full=Transcriptional repressor NrdR; chromosome CDS458312 495 - 0.561616
NA Syncc9605_0149 Ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; chromosome CDS151016 726 - 0.652893
NA Syncc9605_0384 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS384194 1446 - 0.643845
NA Syncc9605_2104 two component transcriptional regulator, LuxR familySubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS1927864 702 + 0.655271
NA Syncc9605_1432 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS1345768 498 + 0.606426
NA Syncc9605_0556 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS539755 351 - 0.527066
NA Syncc9605_0010 NusB family proteinSubName: Full=NusB family protein; chromosome CDS11872 636 + 0.613208
NA Syncc9605_0012 serine phosphataseSubName: Full=Serine phosphatase; chromosome CDS14081 1413 + 0.625619
NA Syncc9605_2284 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS2092861 645 + 0.694574
NA Syncc9605_0601 Twin-arginine translocation pathway signalSubName: Full=Twin-arginine translocation pathway signal; chromosome CDS582743 1014 + 0.659763
NA Syncc9605_0681 Sigma-70 factorRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS651331 1308 - 0.571101
NA Syncc9605_1336 probable ribonuclease IISubName: Full=Probable ribonuclease II; chromosome CDS1250528 2031 - 0.605121
NA Syncc9605_2398 putative Rubisco transcriptional regulatorSubName: Full=Putative Rubisco transcriptional regulator; chromosome CDS2209636 990 - 0.622222
NA Syncc9605_1025 ROK family sugar kinaseSubName: Full=ROK family sugar kinase; chromosome CDS975797 909 + 0.665567
NA Syncc9605_1618 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS1487672 765 - 0.598693
NA Syncc9605_0785 DNA-directed RNA polymeraseSubName: Full=DNA-directed RNA polymerase; EC=2.7.7.6; chromosome CDS749331 1524 - 0.549213
NA Syncc9605_1979 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1799305 1308 + 0.644495
NA Syncc9605_0083 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS85084 1002 - 0.622755
NA Syncc9605_2417 heat-inducible transcription repressor HrcARecName: Full=Heat-inducible transcription repressor hrcA; chromosome CDS2227230 975 + 0.66359
NA Syncc9605_0593 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS574372 594 - 0.585859
NA Syncc9605_2158 putative DNA-directed RNA polymerase (omega chain)RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1975022 228 - 0.583333
NA Syncc9605_0109 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS107540 762 + 0.580052
NA Syncc9605_1300 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1212529 3579 - 0.612462
NA Syncc9605_2067 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1888567 3294 - 0.619004
NA Syncc9605_0879 type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS849184 939 + 0.600639
NA Syncc9605_2664 type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS2474971 987 + 0.594732
NA Syncc9605_1288 DNA-directed RNA polymerase specialized sigma subunit-likeSubName: Full=DNA-directed RNA polymerase specialized sigma subunit-like; chromosome CDS1202581 552 - 0.596014
NA Syncc9605_1536 response regulator receiver domain protein (CheY-like)SubName: Full=Response regulator receiver domain protein (CheY-like); chromosome CDS1414287 429 - 0.657343
NA Syncc9605_0038 DEAD/DEAH box helicase-likeSubName: Full=DEAD/DEAH box helicase-like; chromosome CDS36970 1605 + 0.647352
NA Syncc9605_1225 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS1143302 2439 + 0.628126
NA Syncc9605_0929 LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS895181 624 + 0.641026
NA Syncc9605_1348 possible type 3 alternative RNA polymerase sigma factorSubName: Full=Possible type 3 alternative RNA polymerase sigma factor; chromosome CDS1262004 258 - 0.554264
NA Syncc9605_1314 RNA binding S1SubName: Full=RNA binding S1; chromosome CDS1227175 2322 - 0.59733
NA Syncc9605_2378 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS2191584 789 + 0.618504
NA Syncc9605_2079 NusA antitermination factorSubName: Full=NusA antitermination factor; chromosome CDS1900599 1446 + 0.642462
NA Syncc9605_1641 cell envelope-related function transcriptional attenuator common domainSubName: Full=Cell envelope-related function transcriptional attenuator common domain; chromosome CDS1509431 945 - 0.625397
NA Syncc9605_1663 two component transcriptional regulator, winged helix familySubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS1531127 768 + 0.658854
NA Syncc9605_1709 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1565410 471 + 0.59448
NA Syncc9605_1442 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1353645 1242 - 0.609501
NA Syncc9605_2455 metal dependent phosphohydrolaseSubName: Full=Metal dependent phosphohydrolase; EC=2.7.6.5; chromosome CDS2259841 2277 - 0.624067
NA Syncc9605_0070 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS68726 690 - 0.611594
NA Syncc9605_0631 secreted protein MPB70 precursor-likeSubName: Full=Secreted protein MPB70-like; chromosome CDS609269 1680 - 0.646429
NA Syncc9605_2308 putative transcriptional regulatorsSubName: Full=Putative transcriptional regulators; chromosome CDS2114539 726 - 0.630854
NA Syncc9605_2596 possible type II alternative RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome CDS2407948 1134 + 0.634039
NA Syncc9605_2565 sigma-54 factorSubName: Full=Sigma-54 factor; chromosome CDS2380697 1989 + 0.622423
NA Syncc9605_0079 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS78378 456 - 0.703947
NA Syncc9605_2520 DEAD/DEAH box helicase-likeSubName: Full=DEAD/DEAH box helicase-like; chromosome CDS2330541 3198 + 0.654784
NA Syncc9605_0969 possible acetyltransferaseSubName: Full=Possible acetyltransferase; chromosome CDS924674 504 + 0.638889
NA Syncc9605_0093 type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS93773 1008 + 0.581349
NA Syncc9605_1648 DEAD/DEAH box helicase-likeRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1515608 1824 - 0.622807
NA Syncc9605_1000 possible type II alternative RNA polymerase sigma factorSubName: Full=Possible type II alternative RNA polymerase sigma factor; chromosome CDS948952 930 - 0.583871