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# Chlorobium chlorochromatii CaD3, CaD3

>Cag_1463 NusA antitermination factor
MAKKKIKDEGQERRLQIASAFGEIEQSKMFLDKRTESAAVKMDIADLLKD
IIQKQLRKDYDPEVEANIFINPERGDFEVYILRKIVEDVDIPTIEISLED
IRKIDDSLEVGDYYEEGPIKLDDYLSRKSIQIIKQSVQKKVRDLERLIVY
EECLEKVGEVIAGEVYQVRSNEVIFTYNTSKDHRVELVLPKSEMMKKDNP
RRMPRMKLYVKRIEREKNKIRMDDGTVVEREKPDGGMKVIVSRVDDRFLY
KLFEHEVPEILDGLIIIKAVARVPGERAKVAVESTSARIDPVGATVGYRG
KRIQSIVKELNNENIDVIYYADEPQIYISRAMQPAKIDPMTVHVDIKTRK
ARVMLKPDQIKYAIGKNGNNIHLAEKLTGYEIDVYRDVMDKTTEDPTDID
IIEFREEFGDDMIYQLLDAGLDTAKKVLRAGLEEIELALLGPAKVDEPQL
FHKAPKGTIPMVRERKITDEERRYWHKIADNIYRTVREQFSDDDFDELWD
EELLPSEDAPLDSATEVEPQQDGEGED
>Cag_0776 arginine repressor
MNKQARHFKIREILQRHSVENQHDLLQLLREQGMSVAQATLSRDCAELGL
MRVRVNGSYRMVVPDDNAGRIIKGLVGIEVLSINANETTVIIRTLPGRAH
GVGSYLDQLKSPLVLGTIAGDDTVLVIPASVHNISSLIAYIHSNLSKT
>Cag_0352 NusG antitermination factor
MSAKRKDAEIQSVPVPRWYALRIYSGHERKVKEAIEFEVARCGLSDKILQ
VHVPYERFVEVKNGKKRSLTKNAYPGYVLIESVLDKQTRNLILDVPSVIG
FLGVDDNPIPLRPDEVEKILEPEKDVEHRSVVDVPFNVGDSVKVIDGPFS
SLTGVVHEVCTERMKVKVMISFFGRGTPTELDFTQVKPLAQ
>Cag_0214 putative cold-shock DNA-binding domain protein
MGKVEGTVKWFNEEKGYGFIEQQGGKDVFVHYSAINGSGRKTLVEGQKVT
MEVVQGEKGLQASDVTPLG
>Cag_0358 RNA polymerase I subunit A-like
MILSQGTSPLKGDFSRIKFSIASPESILAHSRGEVLKPETINYRTFKPER
DGLMCEKIFGPTKDWECYCGKYKRVRYKGIICDRCGVEVTTKSVRRERMG
HISLAVPVVHTWFFRSVPSKIGALLDLSTKELERIIYYEVYVVINPGEPG
EKQGIKKLDRLTEEQYFQIITEYEDNQDLDDHDPNKFVAKMGGEAIHMLL
KNIDLDETAVHLRTVLRESNSEQKRTDALKRLKVVESFRKSYEPHKKSRK
KPNALFAEDDMPEPYVYEGNKPEYMVMEVIPVIPPELRPLVPLEGGRFAT
SDLNDLYRRVIIRNNRLKKLIDIRAPEVILRNEKRMLQEAVDALFDNSRK
ANAVKTGESNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHECGLPKSMAIELFQPFVIRRLVDRGIAKSVKSAKKLIDRKDPVVWDV
LEKVIDGRPVMLNRAPTLHRLGIQAFQPHLVEGKAIQIHPLVCTAFNADF
DGDQMAVHIPLSQEAQLEASLLMLSAHNLILPQSGKPVTVPSQDMVLGMY
YLTKSRGGEMGEGRIFYSAEEVRIAYNEQLVGLHAQIFMRYDGQVDQKFD
AIRVMETFVEPTSEKAAWLRKQLDEKRMVLTTVGRVIFNQHVPESIGFIN
RVIDKKVAKELIGRLSSEVGNVETAKFLDNIKEVGFHYAMKGGLSVGLSD
AIVPETKAKHIKNAQRDSTKVVKEYNRGTLTDNERYNQIVDVWQKTSNIV
AEESYQKLKRDREGFNPLYMMLDSGARGSREQVRQLTGMRGLIARPQKSM
SGQPGEIIENPIISNLKEGLTVLEYFISTHGARKGLSDTSLKTADAGYLT
RRLHDVAQDVIVTIDDCGTTRGLYVHRNIEEETSGQIKFREKIKGRVAAR
DIVDTVTGNVLVQAGEIITEELADSIQETAGVEEAEIRSVLTCESKVGIC
SKCYGTNLSVHQLVEIGEAVGVIAAQSIGEPGTQLTLRTFHQGGAAQGGI
SETETKAFCDGQVQFEDVKTVAHTAMNEDGMEDVRTIVIQKNGKINIIDS
ESGKLLKRYMLPHGAHLACEDGVLVKKDQVLFRSEPNSTQIIAELPGTIK
FADIEKGVTYKEEVDPQTGFSQHTIINWRTKLRATETREPRLLILDENGE
VRKTYPVPIKSNLYVEDGQKVLPGDILAKVPRNLDRVGGDITAGLPKVTE
LFEARIPTDPAIVSEIDGYVSFGAQRRSSKEIKVKNDFGEEKVYYVQVGK
HVLANEGDEVKAGDPLTDGAVSPQDILRIQGPNAVQQYLVNEIQKVYQIN
AGVEINDKHLEVIVRQMLQKVRIEEPGDTDLLPGDLIDRSAFIEANRAIS
EKVRISERGDAPARIQENQLHKLRDITKLNRELRKNSKKMVAYEPALQAT
SHPVLLGITSAALQTESVISAASFQETTKVLTDAAVAGKVDYLVGLKENV
IVGKLIPAGTGLKKYKTIKLVGEESAPAPVVVEAVVSHEAEASPMVEEEV
AE
>Cag_0417 NusB antitermination factor
MKTYRRQIREKILQALYTVELRGITLDEAAGWLLTEEILADPNAMKFFNL
LLSSIKAHREEIDNYIAQQTFNWDMSRIAIIDKNIIRMALTEILYCEDIP
PKVSINEAIEIAKKFNSTDKSSKFVNGILDAIFNKLKTEGKVHKNGRGLI
DQSFSRPQKPESEATEIEE
>Cag_0473 sigma-24 (FecI-like)
MTRNNNKEAAFKRLVEQHMEMVVNTCYRFVMNREDAEDIAQEVFIEMHRS
LDSFREESKLSTWIYRIAVTKSLDHLRYMKRKKRFSSLKRLIGMEGEEDP
TENLPDVSQATPHEVMEQAHRAELLQRALDSLPEAQKAALLLSKQDGYGN
QEIAEILGTSISAVESLIHRAKKTLHKKLYDKYSKE
>Cag_1273 conserved hypothetical protein
MKPPFLITTLNKAHDRNAFYSGSEMLDRYLKQQVTQDIRRNLTACFVALN
NEKQIAGYYTLSSASIALDALPESLIKQLPRYTSLPAARMGRLAVAKTYQ
GMGLGATLLTDAIMRAKQLNREIGMYALLVDAKDEHAAMFYLHHGFIRFT
NSPQTLFLPLSQISLQN
>Cag_0440 two component transcriptional regulator, winged helix family
MRLLIIEDEPGIAAFLKDGLEEEYFAVDLAFDGKSGLAMALSNDYDVLIV
DWMIPALSGIEVCRQVRKAGCLVPIIFLTARDTLEDVLFGLEAGANDYIK
KPFAFEELLARIRVQLRSRTQGEESLSAGGVTLNPATHQVTYNGSELILT
PKEFALLEYLLRNKDRVCTRSRIIEHVWDIHFDADTSVIDVYITFLRRKL
EAVGCNNFIQTIRGIGYIIREATAS
>Cag_0425 putative transcriptional regulator, ArsR family
MQRTTTPITYSNDEAQLAIFAKALSHPVRLKILKLLANQTCCFTGELTTM
IPMAQSTISQHLKALLEAGLIQGEINPPKVRYCINRQNWVHAYTLFEDFF
APEDLFSCQCGHGEKESTPSVAVSSTQ
>Cag_1619 conserved hypothetical protein
MSEIMEMVKEMAEDFHKADVMDEITMKSITALCLPDKRSFQPTDIKRIRM
NNNVSQPVFAEILGIGKTTVQQWEHGKKKPNGAANRLLDLIDRKGISILA
>Cag_0459 transcription termination factor Rho
MANNPVVKGLDINLLQRKKVAELHALAKELGVMAAGLRKEELIFKIIEAQ
AQRTNDPDSATVMVNTGVLQVIPEGYGFLRSANYNYLSSPDDIYVSPSQI
KRFNMRTGDTVSGQVRAPKEGERFFALLKINTIDGNDPEITRERPFFENL
TPLFPTQRLRLETRQSEMCGRIMDIYTPVGKGQRGLIVAQPKTGKTMLLQ
MIANAIIQNHPEVYLIVLLIDERPEEVTDMARSVAAEVVSSTFDEDPERH
VLVADMVLEKAKRLVEVGRDVVVLLDSITRLARAHNTIIPHSGKILSGGI
DANALTKPKRFFGAARNIEEGGSLTIIATALVDTGSRMDDVIFEEFKGTG
NMELVLDRRLSERRIFPSIDILRSGTRREELLFSQEELSRTWLLRKYLAD
KNPVECMEFMREKMADTKDNRDFFKYMNA
>Cag_0328 ATP-dependent DNA helicase RecG
MDGTTSVAFLKGVGSRKAVVLGEVGIVTVDDLLAYYPRRYLDRRSIKRVR
ALVDGELTTVVGTIVRTQLEQPTSGKARFKAWLDDGSGLLELTWFRSVRY
FSRFFTKGESLAVHGKVSFFGNQAQMQHPDYDRLTPENAVGGEKGSDDFA
LFNTGAIIPLYHTTEAMKQAGLASRQLRVLIKRALEEVPFREQENLPLSI
IRQYGLIPQWEAEREIHLPSSPEKLEQARYRLKWTELFYAQLLFALRRST
LRRNRAAVRFTHSGELTRKLHESLPYQLTEGQKQAVRDIYRDLRSGSPMN
RLLQGDVGAGKTMVAMFAMALAVDNGLQAMVMAPTEILAVQHALVMKRFF
APLGIELGLLTGKQGKKERRATLEKLRTGDMQLVVGTHALLEPDVQYANP
GLVIIDEQHRFGVLQRKALQEKAANPHVLLMTATPIPRTLSMGMFGDLDL
SIIRDKPVGRQPIKTVLKKEQDKPSVYHFVREQIAAGRQGYIIYPLVEES
EKMDLKAAVESYEELSTAIFPDLSIGLIHGQMSPDEKEHVMERFRQREFS
ILVGTTVIEVGVDVPNATVMIIEHAERFGLAQLHQLRGRVGRGEHPSTCI
LLTAKMTADARERLLAMVSTNDGFVLSELDAKIRGVGNLLGKEQSGTLSG
LRIADLNTDEAIMAAARQAAFTLVEADAQLRATEHRMVREHYMRYYHERF
SLADIG
>Cag_2000 transcriptional regulator, Fis family
MPITHSLHELHRLMRTISNAIGSLHDPQELFHTIITQLRLFFAFDSAAII
TLDNNQRHCSLFFEMLRFQLPEGFVRYQRPVAGSWIEPHVEAQKVAVIRL
RDSLEHFPVDVELRQHLLELGLKQAVLSPLRAGGKVIGFLTFVFQEEQEW
LDEECELLATVSTPIAVAVSNALAYEELRKREAQTAMQLAVNNALLTIRE
RNSMMLAVCEQVQKLLPCTFLGIRVMDKEGNYRLYDNFRLQPDGAFAPVT
AALDMENYDSIARASFDLAIIGGYYGGNSFLELCARFPILEHVRQKYGIC
SFLSLPLWELPASRAGLIISTTMRPFDGHDQATANLIVPQLSLALQNYLA
FEEINELRHKLEGERSCLIEEITATHHVGEIIGSSSALTAVLYRLQQVAP
TDATVLIQGETGTGKELFARALHNLSARSKRALIKVNCATLPASLIESEL
FGHEKGSFTGATERRIGKFELAEGGTIFLDEIGELPLELQAKLLRVLQER
EFERLGGRHVIRANVRVIAATNRNVEQEVASGRFREDLYFRLNVVPLHVP
PLRERRDDIALLANHFANRYAREFSKPNRPIRQNDMQRLLGREWKGNIRE
LAHMVEQAVILSEGSTLDFATILAPQQTLNAPTNRAISSLRTMRAFEEEM
IAMEKQLILDTLEATGGRVSGSGGAAERLAMHPKTLYTRIATLGLSKRYG
>Cag_0534 Hydrogenase accessory protein HypB
MCDSCGCSGDGGMVIRKPSQAEEHHHEHAHHSHHHADHHHSHEHGEEHSH
SHSHEHSHARKVVVEQDVLLKNNLLAERNRGYFDARSIYAINLLSSPGSG
KTSLLERLIPALQQHFPVAVIEGDQQTTNDADRLHALGISAIQINTGSGC
HLDADMVNRAIKQLELKDHSLLCIENVGNLVCPAMFDLGEALKIVVISVT
EGEDKPLKYPAMFHAADVCIVNKIDLLPYVDFNVERCKEYAMQVNHHLQW
FEVSAKSGDGLAALQEWLEHQVVLH
>Cag_0706 hypothetical protein
MNIDHIASEALKLDPKSRAILAETIWESLEDPYLEFSDVTDEEAISLAMK
RDEEIETGIVMPLSHKGLMNSLRRHED
>Cag_1891 putative transcriptional regulator, ArsR family
MSSSMTAETTKAHTPQLVIPDEMLDAVANRFKLLSEPMRLRILRILSEED
HTVQDIVRKINASQANISKHLTLMHDNGMVSRRKVGLKCYYSLADESIIH
ACNLTSHSIVSSLHNQLHWLQKVAPKSEE
>Cag_1659 Ribonuclease III
MPPETLAYLQTLIGSLDGNARLYQTALTHRSVIGNTALSHHNESNQRLEF
LGDAVLGLLISHFLFQNFPASAEGDLSKTRAKIVNSKSLACFARSIGLGE
HLLLGESAAHYNIRDSESALADAFESLIGAIYLDKGLDAAYGFVDKHIIH
HQSFSAIVASEQNYKSCLIEYSQAHHVAAPVYTVIAEHGAEHDKEFTVEV
SCNNIKGCGTARRKKDAEQLAAKEAMERIIALQPLPHEPKDEENSTTT
>Cag_0199 glucokinase, putative
MSRWALGIDFGGTAIKAAVISEGQGLVEDCRVPTNSSAGPEAIFSQLAEL
IGAMYHKGCATCDAANFAGVGLGAPGVVDVERGVLKYPPNLHGWGLVPLR
EELQQRLQQEHGLQVQIHLDNDANVAAFGESRYGAGQPFPNFLMVTLGTG
VGGGIVLNRSIYRGSYGTAGEVGFMIVDVDSPHTHAGIHGTLEGMLGKKS
IVAMACSMMHNAATTSTMGNYCNNDFSRLSPRHIEYAAREGDAVALAVWE
RVGHLLGSALASVTALMDIRKFVIGGGISGAGSLIFEPARQQLLHSTHPS
MHEGLELVPAFLGNKAGMYGAASLCF
>Cag_1274 transcriptional regulator, XRE family
MFTMDDLGQALRERRKLLGLSQLEVAKRNNISRITINRLENGRLPELGIR
KIMMLCLSLGLELTLKEASPRPTLNDLIREQESHYA
>Cag_1798 transcriptional regulator, XRE family
MTTTSLLKRTVDKISPVTKKFVKRQGEFAVRVSEIMKSTGMTQRQLAEKL
GKKESYVSRILAGWANPTLKTITEFEVAIGHDIIDISVQKKFTYPVVIKN
PSWSTDGSQKTIATSSHVCAGNANYDINNDYALVG
>Cag_1424 Negative regulator of class I heat shock protein
MDYRELTARERQILGIIIQSYVVSAAPVGSKYIARHYNLGLSDATIRNVM
AELEELGFISQPHTSAGRVPTDKGYRYYVDLIMTVKTLDEQEKQRFEQHI
TPLERKGTSADVLLSAVKVLGTISRQLSVVLSPTLSNALFEKLDMVLLSS
TRMMVIISIQSLFVKTIVMELHMQVSRQMLDEVVDVLNERLSGLTLSEIR
RSINQRLADCSCDNELKNLIVRSAGTLFDEMPVFERLYISGTEYLVEQPE
FQQPEKVRDLITMLEDKFSVATLVEQHHANNPDVTITIGKEHGKRQAEDL
TVLSAPYYVGDMVGTVGILGPKRMDYEHAVRILHYMAGSLSSTLSIQN
>Cag_1889 sigma-24 (FecI-like)
MYLKVAFSFGRYSMEMDAVMTKKTITTTKTATSSPPKALSAAEQKRQLEF
QREAIVHLNSLYNYALHLTMNADDAEDLVQETYLKAYRFFDSFEKGTNCK
AWLFKILKNNYINRFRKDTREPGFVDYDAIKDFYHTIKDVQSDTSETESD
YFHSLLHEEVYQALKSLPEEFREVIQLCDIEGFTYEEIANMVESPIGTVR
SRLYRGRKLLHEQLKEYAEKHGWHMNDAPNNPA
>Cag_1885 putative transcriptional regulator
MTQQQIITELGLGNGYAVEFIPAIKIAKLGTVACGYLNCGGGYVICGVNE
DGSVVGCNLEQLEQLEEALHNDIAPKALITIEQETLEGKPILLIEVPAGH
DVPYAFANTIYLRTANYTHNANVEAIRDLVMRRNVEPERWERRFSLAAIE
SDLDVDELYKTIADAKSANRTFFRNERDVVQTLEDLAVSRYGRLTQGGDV
LFSRNPALRYPQVRVRAISYASDKTGNTYRDIKSFEGPLHRVFVEAYTFI
LRNTPTVAHFSKASPIRQEQPMYPEFALREALINAFAHRDYATASGGVAI
HIYPHRLEIWNSGTLPDGVTPNNFTNGQLSILRNPDIAHVLYLRGLMEKA
GRGIVQIVKACLNAGLPAPQWASDAARGVTLTFIAGEVSGEVSGEVSGEV
SGEVSGEVMRLLQAISGEMKRTDMQEQLGLKHEDYFRKAYLLPALHNGFI
EMTIPDKPKSRFQKYRLTTKGQQLMEQGVQA
>Cag_1097 conserved hypothetical protein
MIDSREQKIIEYLKQAGACSSKELHEHIGIAVSYATLKRILSKLIAENFL
VSVGQGKGTKYTISPIFELLEPIDIERYYEKEVDERDIKEGFNFSLINGV
LVKYNVFTKAELEKLNKLQAKFEHNISQLTANEYKKEFERLAIDLSWKSS
QIEGNTYSLLETERLLKEKQTASGKTKEEATMLLNHKDALDFIIEHPDYL
YPLSVSKIEDIHTILTKELSVERNLKKRRVGISGTNYCPLDNEFQIAEAL
RSSCDVINAKSSVFEKALLALVLISYIQPFMDGNKRTARIVSNAILINER
HCPLSFRTVDSLDYKKAMVLFYEQNNISHVKEIFINQFEFAVGTYF
>Cag_1493 Protein of unknown function UPF0074
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELM
HHHLVASKEGAHGGFRIETNPDNISVKQLIEIFQGEVQVSECMFRKQVCR
NRSSCVLRHEIMRIEEVVSHEFGQLTIGSLLRKLQMQQGTGAA
>Cag_0381 transcriptional regulator, XRE family
MDDLQRAITKRKSIDTEFAQTFDKGYEEFKIGVLLKEARKNAGLTQEALA
IKLNTKKSAISRIENHADDIRLSTLYHYAEVLGKQIKVSIQ
>Cag_1882 Transcription-repair coupling factor
MKTQLASEESSVAVVRHNPSWLFDILRQSAPYNQLTSLLSKSNAQQKGDI
LLPLAGLYGSFSSLLAATLFADATAPLMVVCSSNSFERYENDLEVLLPKG
SLCNSADELSHTIEALATKRRSLLLSLFDDLDVPLCSPSEVESRMFHVTL
DATIGYDALKHFLTANGFEQRDFVEDEGEFSLRGSIIDVYPFGAAEPLRI
ELFGDTITSLRLFDSNSQLSGKNLQQATLTANFTTPNSPITLLDYLAPET
VVLVDDVAELIAQSDGKELLERLCYFRCLSINHAEVQALNFGGEAQQKLQ
GNFRTLATLLHTAHHEARQPLFAMSSKREIGELNDFLAQESSQEALPQSG
WLPVTLHSGFRFGSLDLYTESDIFGKMHTHKVHRKRKVRGISLKELQKLK
VGDYVVHEDYGIGIFKSLETITAGNSEQESVLIEYANGDQLFVNVQNIHL
LSKYTASENSSPTLSKLGSSKWAAKKEKVRKKIRDIAINLIKVYAQRKMQ
PGFAFAPDSIFMREFEAAFIFDETPDQLRAINDVKKDMQASHPMDRLICG
DAGFGKTEIAMRSAFKAVESKKQAAVLTPTTILAHQHADSFTRRFANFPI
SIAVLSRFVSRKEQLSLLKKIEEGKIDIVIGTHRLVSKDVHFKDLGLLVI
DEEQHFGVEVKEKLREQFPTIDTLTMSATPIPRTLQFSMLGARDLSIVST
PPKNRQPVETIITDFDAALIQSAIQRELQREGQVFFLHNRIAGLETIAES
LRELVPSARIVYAHGQMPTRELEKIMMDFMQQEVDVLISTTIIGSGLDIS
NANTIIINRADLFGLSDLYQLRGRVGRSERKAYCYLITPPMKTLKKDALQ
RLAVIESFTELGSGFNIALRDLDIRGAGNLLGAEQSGYIHELGFDLYQKM
LEETVAELKTNEFSHMFEEEGNKPLRQQKPCDLLFFFDALIPDYYVAATQ
ERFAFYNRIAKATRNEQLDAIASELCDRFGKLPEEVTNLLMITKLKLIGT
LLGLEKIDIQPQSTMLYLPDQASEHVAQRHYLQYLFTAVQAEWMAEYKPG
FKMEKKMKLQLHHPTHADTTSAGLMERYSALLHKVYEEAKSEVEAAMVG
>Cag_0855 conserved hypothetical protein
MDAKEKVLEVLTQESEPLNAGKITEISGLDRKEVDKAMKALKDEGAIVSP
KRCYWTAAGK
>Cag_1328 transcriptional regulator, MerR family
MYNKEQENKMAFESTKSYYSISEVTKIASVPAYLLRYWENFFTELNPSRD
TRGNRRYTNRDIAMVLHIKELVYEKGYKLGKASELIKGKPRDTEEDHKTA
EILRLQKQMGNDKNRFHTIEERRTLLLREIKLEIEEMLQMLG
>Cag_1589 putative transcriptional regulator, AsnC family
MSCHLDVIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKGGI
IKGFTLEVDERQLGFDIHAFVRVRIDSSKHYKSFMEHVLKEDEIMECFSV
TGEGSHILKVMTHNTASLEQFLSRIQSWPGVLGTNTSFVLSQIKKNRKIC
SDIVRRNLQDRQVLTTFDEKKSKR
>Cag_0387 RNA polymerase sigma factor rpoD (Sigma-A)
MRQLKISKQITNRESLSLDRYLQEIGKYDLLTAEDEVRLTKAIKEGFDMP
VDTPEYKRAKRALDKLIKGNLRFVVSVAKQYQNQGLTLGDLINEGNLGLI
KAAKRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGTLNKI
SKAYSQLEQEYERDPNTRELASLLEMDSQDVADTLKIAGRHVSVDAPFAQ
GDDNRLLDVLQNDGHMPDYGLTRDSLTLEVERSLSVLAPREADVIRSYFG
IGMDNPLTLEEIGEKFRLTRERVRQIKEKAIRRLRQSAYSKVLKEYIGG
>Cag_0664 putative transcriptional regulator
MEHEIIDGKQLLIVRVRKGYAKPYATSSGVYLTKSGSDKRKMSREELRRL
FAESGGLSADETVIHGSDIRDINTEILNDFLIKRDREIFEALRAQRVQLV
TICENLDLVAHGQLTLAGNLLFGREPQRFSKSFYVQCVHFDGNDVGCNSF
ISKDIIYGTLQSMYKQTLNFLKSSLRRVQKGKNFNTLGEFEIPEICLTEA
LINALIHRDYFISSSIKVFIFEDRVEIISPGKLPNSLSVEKVRLGISIHR
NPILNSLGQYLLPYSGLGSGIRRIEAHYPLVKFFNDTDKEEFRCVFFRS
>Cag_1858 transcriptional regulator, XRE family
MSKRSNVKTLDQFVDEQYGKKGIVKREKFEKGYEAFKLGFLIQQARLEKG
LTQEELAEKCGTNKGYISKIENNIKEVRVSTLQKIVELGLGGHLELSIKL
>Cag_1811 transcriptional regulator, XRE family
MKNKSKTYQSEAFAAIHETASGMYDVGVIDKQTMREFDEVCLTPIHHVTP
SDIKALREREEVSQSVFARYLNVSKDVVSQWERGAKKPAGTTLKLLALVE
RKGIRTIA
>Cag_1300 Protein of unknown function UPF0074
MLQVSRKFEYGLHAITYLATKGQNRVVTVKELSEELGFSQEFLSKAMQSL
KKAGITKSVQGLRGGFRLIKPITEITVADIAVATEGEPHLVQCNISAERC
HVYATCQHKAFMNTLQHKIHELLATTTIVALLEQCDIPFTPYTLIIDTEE
TEKMEDGEESLEDMESSKPIIPFSPLYYAPVKTHSK
>Cag_1221 putative transcriptional regulator
MITETEVQLLLSNMEADTIERTTAVADTDKFGQAICAFANDLPNHRAPGY
LLIGVKDNGELSGLTVTDELLKNLGGIRSQGNVLPQPYMNIAKFSFASGD
VAVVEVYPSDLPPVRYKGRVYIRVGPRKGIANEQEERVLTERRIALARTF
DARPCGEATLSNIALGQFDAYRREVIDAETIAANNRSIELQLASLRLFDL
KYNTPTHAGILLFGKNPRYFLHGAYIQYLRFPSTDITDIPLDQAEISGDL
YVVLRELEMRVKLLIQTSMRQVSTLKEQLLPDYPEWAVRELLMNAVMHRN
YESNTPIRFYAFSDHIEIQNSGGLYGEATPENFPTCNSYRNPVIAEAMKS
LGFVNRFGYGVQRAQALLAQNGNPPATFEFNEHSVLVKVWKRMK
>Cag_0584 conserved hypothetical protein
MSVTTIHLQPEIEQSLQAMTVALKKSKDWLINQALQEYIDRQHVEQERWQ
QTLHAMDSVAQGNVVSGDAVHAWLRSWGDENELPPPIKEKK
>Cag_1890 conserved hypothetical protein
MTCTEARLLMSAAVDCEISFIEQEQLQQHLALCAPCCIEFETVKKTKLIV
RARLIQFKAPQSLVNSIMELTNADCHHE
>Cag_0084 transcriptional regulator, XRE family
MPKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQ
QAGMTQEAVAEKIGTTKSAVSRLESAGKHVPSLSTLRKYAEAVGCELEIK
LTPKKQGFA
>Cag_0308 hypothetical protein
MSEDKRHRTKFYSIEDMSGGHQLSKAETLLDNFNAAADFSLNDLLEFYNI
KLYFDKNLFLTTWTEDKKKSYKANVELAYNQLKERIYKVTDESLEQGLTD
IEYNFYDDYWSLLNNINDLKKITDTILTEVLGKHPRQISYILKEKKLVDK
YDKTIRNFLIGYSDSAQILLSSLEEKDTLGRREKNHFPKSLTLNDKETII
NSYLDTDEPNLNYVRLIENSRDTSEFKLSDKTRLKAKKKSKELNDKVLEN
GHTWNVGVGVSLSKDQKEPFKFKSEGTTFEASYSESFIDMLPTDLDLFLV
FKYLFFYTDEKNLISLVSKQSELDVLERTFMKSKNEYEIGFSFFRKENLS
NLQLYIFSDYLKRKNKSLESIINSYVTSLNESISPNKIVFKLPLNESSYL
EKIRTLTPDFEFFLKQYKLLIDEKSIDLELIQISSTPIRISEIYSNKTKK
YLYSDDNLILQLKYLFFSDQSHLYYVKHFENKYHCLFDLLTNENVKLEYF
ENYQKDTIQSLINDGYLKLSNDEYVTLNKEILIYLIGELHHKEVISYWNY
PVQCRPVMDELIEKKLVIAENTLLSRQERNYYNFYLNKKEFTNGYDLRNK
YLHGTNAFSEKEHEFDYHRLLKLIILTLLKIDDDLHAEK
>Cag_1540 two component transcriptional regulator, winged helix family
MFIVKRLVNPQFLLLMADNKKIIVVEDDSDFLDSIVEYLTLSGFDVTGVK
SALEFYYSISQNNYLLVVLDIGLPDQNGLVLADYVRNNTDIRIIMLTAQS
SLETKITAYKAGADIYLVKPIDLSELAASIQSIIGRLENTTHSLHSEPIS
NEREIIHEQPSALWKLLRSNEALYTPEKNEIKLTSKEFYLLEMLASSPNK
IVQRQTLLETLDYGNDEFGNRALDALIYRLRRKKGDRNEKLPIKTAHGAG
YYFSSPIVIA
>Cag_1101 putative transcriptional regulator
MDSRLRGNDRNIKHTTMNEEFIKELISKGETSSTQFKLNISNELSIAQEM
VAFANTKGGRILIGVDDKTWEVIGLTDNDIRRLTNLLVNASSEHIKPPLF
IETETFIIDDKKIIVVVVPEGSDKPYKDKDGIIFLKNGANKRKVTNNEEI
LRLLSKGKHLFADELPVNQATIEDINKDKFDKFFLREFNAEYEALGLSYQ
EALKAKRVLKEGKITLAGFLFFGKMPQNIKPAFCIKCVAFYGNSLGGTEY
RDSRDINGTIPILFDEGMAFFKRNLLHTQQGQNFNSQGILEISIIALQEL
LENALIHRDYIKNSPIRLLVFDNRIEIISPGCLPNSLVVEELRYGNPVVR
NNLMVSYALHTMPYRGLGSGLKRAFEQQPNIELINDTEGEQFKVIIPRPE
KR
>Cag_0435 two component transcriptional regulator, winged helix family
MRGAFSSCSSTFFLQNLMSEPLLLVVEDDQNLAALMEYNLNRAGYRCHIV
GSAEAAMVELGRKSFALVLLDVMLPGMDGFELCRHIRNTHLYRDLPIIMV
TAKGEEIDRILGFELGIDDYVVKPFSFRELNLRIRAILKRERRQSGKAQE
VLGTGGLEVDLVRHCVTLDGQELVLTLMEFKLLVALLKRKGEAQSRETLL
SDVWDIDKSISTRTIDTHITRIREKLGNYGALIKTVRGLGYRLEPQEDEQ
HAS
>Cag_1218 putative transcriptional acitvator, Baf
MDISASTDRLLLVVEIGNSSTSFVVFQGDQSLALQKVATNLLTTVDGVAA
SVEPIFAAHPMLVDAVVCSVVPQAEEAVVTYLHGSITGKVMQVNSALKLP
FTLAYEDVTTFGADRLALCAWCCLSHTAYAFIALDIGTACTIDVLNSKLH
YLGGMIMPGLELMARSLHEHTARLPLVDVSTVSLSLLGNSTTECMQLGIV
WNFTLGLEKMIESIKMYLEYEEHDREILLVATGGAAPFVTSLFTMQCQVE
ELAVAHGARLLFSYNQ
>Cag_0216 response regulator receiver domain protein (CheY-like)
METIAQNSFECHKEHADAKYIKHMKIVNQNIVHVWVETEYGTEIDLEHMD
IDLLQSLLPKIQSPDKKLHILYNLTNIKSITYNYKYAITKLLFHLSPSIG
VIAFYNISPSVNAIIQIFEAITPKGIIILQEKTYDDALTKIMQYNDGKPP
TSSHAMLNNNDAQYIRCFLEGCARLSWLNIYDQPITIPPEGHPLQLLFQA
FDSLREDLIVKEKTQGIEIARLRQEADRAIQDKIIVLKAKQELYAKKIQE
KEEEIATLAKQIAHQENVKSYSIDHQKKHRKEIASLLSLINSLDINDSAK
EKLQAACNKILKDEKELYNKISEVDKFYIQRVKEKFPILSDKELHTCLLI
TKNFNSKEIALEMGIAERGVETFRYRIHKKLTLPKNQSLKNYLLSLTL
>Cag_0781 Sigma-54 factor
MADFTLQQKQVQHLSAQQILGSQLLQLPMQQLEERIYQEVQENPMLELVE
APRDGQIDGVVAEPSNGAVGEMFDSIDRFSRASLNSRVHSGSPSSGQGGS
DDSKERFFQAVQHDSLAELLCRQLALQEHIGEREMAIAEEILGNLDSDGY
FTESIELIVASLQQAEVIVSNAEVEAVLHSIHFLDPAGIAVRNVQQRLMV
QLQVAAHRYPAATYNVAMRLLGDYYDDFLNRRLDMLLKKLGVPKAELEAA
VTAIIALDLHPGVFYDEGGHYISPDVIVTYENGELTAALNDRSALSVKVT
DRYRELLANRKAPKEEKQFIRHNIQRAQDFATALAMRRQTLLKVMEALLK
QQYAFFVSGPEHVVPLGMKSVAEETGLDISTISRAVNGKYVQTRFGVFEL
RYFFGSALSTDEGEELSSKIIRQHLAEIIKAEDSAHPLSDDTLAEMLVSK
GIRIARRTVAKYREQMQIPVARLRKKIF
>Cag_1228 transcriptional regulator, Fis family
MLITQQNDYGSISLLAEVSRTITHEEDINKVLRLVLFIMSENMHMQRGMI
TILNRSTGEIVINESFGLTEEERERGRYHIGEGVIGHVVKTGKAVIVPSI
QDEPLFLDRTGSRAQAKKEELCFICIPIKAGSEIIGTLSADRHVEPVTAD
EHRRKTRQTDDRDERIDKLQFYVDQLSIIAAMISQAVRLKQLAYEAGSKN
VQDLSNLPPFAASIPPRSEDRQVNAIPPPSPDRPANIIGNTKPMVSLYSM
IDKIAKTSATTLVLGESGVGKELVASAIHFKSRRAEKPFIKFNCAALPEN
IVESELFGHEKGAFTGALATRHGRFEMANNGTIFLDEVGELSLSVQAKLL
RILQEKEFERVGGSKTIKVDVRVIAATNRNLEELIRQGQFREDLFYRLNI
FPITVPPLRERKTDILLLADYFVEKYNKANQKGVRRISTTAIDMLMRYHW
PGNVRELQNCIERAVILSEDNVIHGYHLPPTLQTAESSGTPYTGSLQQKL
DAIEKEMIIEALKRTQGNMSRAAMQLGLSERIMGLRIKKFNIDYRKFRV
>Cag_1116 DEAD/DEAH box helicase-like
MSEQQLPLENNFFSLQLPELLMKALEEVGYESPTPIQAQTIPFLLAGRDV
LGQAQTGTGKTAAFALPILASIDIQQAEPQALVLAPTRELAIQVAEAFQR
YAEYLKGFHVVPIYGGQDYGIQFRMLRRGVQVVVGTPGRVMDHIRRGSLN
LTHLKTLVLDEADEMLRMGFIDDVEWILEQTPAGRQVALFSATMPPPIRR
IAQKYLDQPAEVTIQTKTTTVDTIRQRYWVVGGSHKLDILTRILEVEPFD
GMIIFSRTKTMTIELAEKLQARGYAAAALNGDMPQNQRERTIEQLKNGNI
NIVVATDVAARGLDVERISHVVNYDIPSDTESYVHRIGRTGRAGRAGDAI
LFVAPREKNMLYAIEKATRSRIEQMVLPTTEVINNKRIAKFNQRISDTIA
AEDLGFFTRMIEQYCNEHNVPMLDAAAALASLVQGETPLLLADKPERSRS
SERDSYGSSRDRGFEREGRDSRSGGREGRSDRFERDGRSGRDDRGGRDER
SAPRKRGRSEVYGEEPKDRYRLEVGSTHGVKAGNILGAILNEAGLAPESV
GHISISDTYTTIELPKQMPDTMFHELRKIRVCGRQLRLSRMEEHEGGHST
HSSHGTGAYGGGAKKSFRKPNKSANDEGEFFAGFKKKRKG
>Cag_0541 putative transcriptional regulator
MRKMAQQPSSRSFALPPPDGRVAMAVVQQQIEAIVFAANEVVTIATIRQV
TGLLLRPAEIKNMVERLNEEYEATGRTFRIHAIAGGYRMLTCPEFSDLLR
PLNAPKTRRAFSRSLLEVLAVIAYNQPVTRADIQQVRGVSPDYAVERLLH
HGLIEVRGRADAPGRPLQYGTTAAFLDMFHLSSLTDLPKLREIREILQEQ
EEERELQPSNKSNNPLNVYEAGKE
>Cag_0914 transcriptional regulator, XRE family
MAKTEIKSYSLAEMKDKYIGKLGTEERDQYEYELRMDVLGKMIKTARQER
NLTQEQLGKLVGVQKSQISKLESNTHSATIDTILKVFKALKADIHFNVTL
EKRYVQLV
>Cag_0411 transcriptional regulator, AraC family
MQASHKAPIHQNSAFSKKVDEAALLSPIHSLVPSEAGEVVCNTVQLSAGM
SMQWCTLHCSNAVLHEGTLLPIATLTDHWEEPMLCIYHSANGRFSFADAV
EGLDGEEMMFGGKECLITYTQERHALLCMEATKGKVELSTLILSKSLLLE
LLDSNYAMLLLDGLQVSSAPSAHLHALPPHVTKLLEPPQQSPSPNLPNLP
LDSLACLTLQVRVLDYLAALLQMVLHRAEHEKNAATLSERIEHLHSTLMQ
YEGKIPPLQELAKRYNLSVRTLQTAFVARYGSTIGAYITRYRLEQAHRKL
LESDLPMKIISRNLGYSHVNHFITAFSRHFGYSPGSVRKTASPKKGNS
>Cag_0368 hypothetical protein
MHAKDVVSKDILKRIALDIARILLHLKVDHAELLETEHQRVEERRADVVV
LVQGESGRFILHLEIQNDNQANIAWRLLRYRSDIGLAHKGYDIKQYLIYI
GKAPLSMPTGIHQTGLDYRYHVIDMHSVDCQALLTQDTPDALVLAILCDF
KGRSEREVVRYIIQRLQELTAENESRYHDYMRMLEILSANRSLEKIIEEE
EAMLSVVDQTRLPSFRIGMRHGIEQGVQQGTLSLVKRQLTRRFGTLSYHH
VARLDKLNIEQLEELSDALLDFNTVTDFDVWLENRKN
>Cag_0357 DNA-directed RNA polymerase, beta subunit
MADATTSRIDFSKIKSIINSPDLLKVQLDSFHNFIQDSVPLAKRKDQGLE
RVLRGAFPITDTRGLYLLEYISYAFDKPKYTVEECIERGLTYDVSLKVKL
KLSYKDEADEPDWKETIQQEVYLGRIPYMTERGTFIVNGAERVVVAQLHR
SPGVVFSEAVHPNGKKMFSAKIVPTRGSWIEFQTDINNQIFVYIDQKKNF
LVTALLRAIGFARDEDILALFDLVEEVSLKASKREQLVGQYLASDIVDMQ
TGEVISARTAITEEIFEQILLAGYKSIKVMKSFSNNEKGMDKSVIINTIL
NDSSATEEEALEIVYEELRANEAPDIEAARSFLERTFFNQKKYDLGDVGR
YRIKKKLRREFEELYSFIGEKPELKALSDTIEEKILQTIQTYSDEPIGED
ILVLTHYDIIAVIYYLIKLVNGQAEVDDVDHLANRRVRSVGEQLAAQFVV
GLARMGKNVREKLNSRDSDKIAPSDLINARTVSSVVSSFFATSQLSQFMD
QTNPLAEMTNKRRVSALGPGGLTRERAGFEVRDVHYTHYGRLCPIETPEG
PNIGLISSLSVYAEINDKGFIQTPYRLVDNGQVTDTVVMLSAEDEENKIT
VPVSIPLDENNRIAVETVQARTKGDYPVVAATDVHYMDVSPVQIVSAAAA
LIPFLEHDDGNRALMGANMQRQAVPLLTSDAPVVGTGMEGKVARDSRAVI
VAEGPGEVVDVTADYIQVRYQLDADNNLRLSMLDPDEGLKTYKLIKFKRS
NQDTCISQKPLVRIGDKVEKNTVLADSSSTEYGELALGKNVLVAFMPWRG
YNFEDAIILSERLVYDDVFTSIHIHEFEANVRDTKRGEEQFTRDIYNVSE
EALRNLDENGIVRCGAEVKERDILVGKITPKGESDPTPEEKLLRAIFGDK
SSDVKDASMHVPAGMKGIIIKTKLFSRKKKIGLDIKEKIELLDKQFAAKE
YDLRKRFAKWLKHFLDGKTSTGVYNDKGKVVVPEGTVFEESVLAKFATAQ
FLESVDLSRGVVSSDKTNKNVTRLIKEFRFLLKDIADERENEKYKVNVGD
ELPPGIEELAKVYIAQKRKIQVGDKMAGRHGNKGVVGKILPVEDMPFMAD
GTPVDIVLNPLGVPSRMNIGQLYETSLGWAAKKLGVKFKTPIFNGATYEE
VQRELERAGLPTHGKVSLFDGRTGERFDDEVTVGYIYMLKLSHLVDDKIH
ARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASNILREMLTVK
SDDVVGRNKTYEAIVKGQNLPEPGIPESFNVLVRELQGLGLEIRIDDKVP
>Cag_0752 Ribonuclease R
MAKKRSRRKSKDSAYKGKKPSTRVPQGDRVSPNDHLLINEFLFKRGETSL
AAEIVTFFADHEGERFRSVELARLLGYTESRQLPGFWYVLHKLHEDGTLD
KDSNRSYGMVGIDDASYQDHLVHVKPFPLLGKKQYKAGELYSGRLITHPN
GYGFLEVEGFDDDIFIKAGDLGAALHGDEVEVLVSSTPETYTAKASPHQR
CEGVVQRVINRHLTMIVGTLTKVARKFQLKPDDRKILPEIFVALKHARKA
KDGQKVLVGELDFTQLGEINGKVVEILGTAGDSAVEVSAIARSKGIDETF
DDALLQQVQSVSDTISEADIKDRLDIRDKVVFTIDPIDAKDFDDALSVEM
LEDGLCRVGVHIADVSHYVQENSPLDREAQKRATSVYLVDRVIPMLPARL
SEQICSLNPGVDRMAYSIFFTLTPEAEVRNYEFHKTVIHSKRRFTYEDVE
EILHKGEGDYLQELQLLDRYSTILREKRFRDGGLDFETEEVRFKLGKEGE
PLEVIKKERLGSHRLIEEFMLLANRKVAKHLTKTFRENRKTPLPVLYRVH
GSPQEEKVVMVANFVKRLGYDLKINRSKEGIIVSAQSLRQLLQQVKGTNV
EFLVSELVLRCMSKAVYTGDNIGHYGLGFEHYTHFTSPIRRYPDLLIHRM
LFEYERMRKKRRKMSETRLGELETTMQRVCQISNEREKSAAEAERESIKL
KQVEYMANHVGKSYAGIISGATDYGIYVRMVDFAIEGMVHMRNLTDDYYE
YDEKTYSLIGKRRKRRLQIGQRVTVKINNVDIHRRTIDLVMELE
>Cag_1386 transcriptional regulator, XRE family
MEKINNNLTSWDDHLDNKYGKQGTTTREKYEQEFEAFKIGVLIQEARKKQ
HLTQEQLAEKVGTTKNYISRIENNASDIRLSTLMRIISEGLGGHLKLSVD
I
>Cag_1085 conserved hypothetical protein
MKRQPHTLPLSTTPITPCNTLHTLYTVAYWLTQQSNEAEELVRAAYQHRQ
GDTTLHSLLDALRHHAHRVGATTNPLEAEALDIRFTVLLADVARLKHSEI
AAIVQQPLAVVRYWLLIGRQQLASEQTLRASA
>Cag_1363 serine/threonine protein kinase
MRKRLFIKKQKFDKWELKRFLGGGGNGEVWECCDEEGNKGAIKLLKHVKS
KSYARFCDETKIMEQNFDIEGIIPILDKFLPEKLDGSIPYYVMPMAESAE
KVFKAKNIVSKIDSIIEICKTLAKLHERGIAHRDIKPPNLLVFNSRLALA
DFGLVDYPDKKDISLQNEEIGAKWTMAPEMRRESSKADSLKSDVYSLAKT
IWIILTENPKGFDGQYSIDSIIELKRFYNKTYTTPIDNLLTKCTDNDPNQ
RPTVNEIILELENWKVLNKDFHERNQEQWFEIQTKLFPMTFPKRVIWENI
EDIVKILKVVCTYDNLNHMLYPNGGGMDLEDVRLSHEKSCIELDCQLINI
VKPKRLLFESFGYTAEWNYFRLELYELEPSGAYENDEYYENIQYYEEYDG
YVSPENTMQLLRWFRGSFVIFNKRSVYNRISSTYDGRHNKMNTEEFRDYI
QEMVSHTIEMNKKKSAMATIESKRRKTR
>Cag_1775 metal dependent phosphohydrolase
MIAQIDKEHYQKIHEILALARRNLKNVDESLIQRAFFMCYRAHEGEKRAS
GEPFFYHPVEVATILLNELPLDGVSVAAALLHDVIEDSGYTYDDIVAELG
VEVADIVEGLTKISGITINRETTQAEGFRKMLLSMVKDIRVILIKFCDRL
HNMRTLESLPEHRRLKIALETRDIFAPLAHRFGLGKMKVEFENLALKYID
PEMYRFLEQKLRMNKGDRVSYLSKMIQPIKSDLEQQGFKVEVQGRAKHLF
SIYNKMRNKNKSFEDIHDLYGIRIIIDTERIADCFSVYGFITQQYPPLPQ
YFKDYISIPKHNGYQSLHSAIIGPKGNMVEIQIRTRRMHEFAELGVAAHW
RYKEKISQDDAHVDSFLRWARELIKDADSATEFMEGFKLNLYHEEIYVFT
PKGDMKTLPAGATPIDFAYAIHTEVGHGCIGAKVNGKIVRLNAILKSGDR
VEIITSKTSKPKADWLNIVVTQRAQMKIRSAINEDRRLQIEKGRNIWDKL
VSNTKKLLTDNEIVQQAKKYGIKTPSDFFSALANQEINGEEVLAQASAAK
KAEQLTKSVMDEARELDEYLQAARQEAEPEQQKIASRRDEVVIAGMSNIA
YSYAKCCQPVPGDDVIGFVSTDGVVRIHRKNCINVSNDSLVKSERVVAVA
WNRKIDTEFLAGIRIIGEDRVGIMNQITTVISKLDVNIRTISLNANDGMF
VGIMTIFVRNADKLSSLMEKLKKVQGVFTVERLIS
>Cag_1601 conserved hypothetical protein
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPL
EFKVREAIHGFNDVDDVLHQGGPVQVNSIHFLHSRGDLIHNSQEVLPGIY
WGGNKDEVSYLLNTGVMHPSEIRFYLGYAGWSAGQLFSEFEEGAWYTAEA
TPDVIFSDAYERMWSRTVRAKGGAYQLIANSPELPGMN
>Cag_0495 GreA/GreB family elongation factor
MNDRIYLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYD
AAREEQSQIEARIGDLESKLSAATILDPKQIKTDKVYILTSVKLRNLDNP
DEIIEYTLVSSEEADTDAGKISVRSPVGRSLIGKTVGAKVTIVVPKGELH
YEILEIFVKP
>Cag_1078 transcriptional regulator, AbrB family
MPITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVD
DLFGRLFDPTRKAFSTEAINDALRQKFQHDEQ
>Cag_0149 NusG antitermination factor
MAEIITPQNWYAVYVRSRYEKKVYQALLEREVNSFLPLYETIRQWSDRKK
KVSEPLFRGYVFVNIAMQQESIKVLDTEGVVKFIGIGRKPSVIAEREIEW
LKKLVREPEAISRTVASLPAGQKVRVIAGPFKDMEGVVVKEGRESQIVIY
FDSIMQGVEVSIYPDLLQPIGKERQPLPTHSSEDELVSVEKHLLRVS
>Cag_0895 hypothetical protein
MMQSIIRNATLSDLSRCAELLAILFSQEKEFAPNATAQLHALTMIAESPA
SGQIFVAEVNGKVEGMVLLLFTISTYLGKRVALLEDMIVTPEWRGKGIGS
QLLRHALAYAQSNGMGRVTLLTDLDNEAGHQFYKAHGFVRSSMVPFRYVW
E
>Cag_1804 ParB-like partition protein
MGEMQKKGLGRGLKALIPDELMPDEQVVVQPPETSPSEPATVGSICSLPV
EKIHANPFQPRKEFDATALEELKNSIIENGVIQPITVWRNGDIYQLVSGE
RRLRAVTLAGFKFIPAYLIEAPEDSAQIEMALIENIQREDLNAIEVALAL
KSLTTRCNLSHEEVARKVGKNRSTISNLLRLLKLPLSIQESIRNHDISSG
HARALINLPTEQQQLKVWKQILSQQLSVRQTEALVNRLANEQEQSTQPPR
ERATRLAALEAYLRDNLATKVKIVEKKDGKGEIHIQYFSHDDLERLLEFM
RRD
>Cag_1824 DNA-directed RNA polymerase, alpha subunit
MIYQMQMPAKIELDESSHSDSFGKFIAQPLERGYGVTLGNLMRRVLLASL
PGTAITGIKIENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTT
VTLVGPMEFTAGVIQPQEGEFEVLNKDLHIATINAGTTVTLDIFIGRGRG
YVPAEENRAEGMPLGFIPIDSIFTPIRNVKFTVENTRVGQRTDYEKMILE
VETDGSITPDDSISLAGRVISDHVLLFADFSPAEEEYTEEEFKQQDDEFE
TMRRLLATKIEDLDLSVRSHNCLRLAEIDTLGELVSHKEDELLNYKNFGK
KSLTELKEQLDKFDLKFGMDITRYQMK
>Cag_0657 putative transcriptional regulator
MFCDDLKGLIASGEDSFTQFKENIFDSKKLAEEFVAFSNAEGGVILLGVN
DKRELVGLDNADIHRLNQLISNTANENVKPPIYPLVEHEIIDGKQLLIVR
VRKGYAKPYATSSGVYLTKSGSDKRKMSREELRRLFAESGGLSADETVIH
GSDIRDINTEILNDFLIKRDREIFEALRAQRVQLVTICENLDLVAHGQLT
LAGNLLFGREPQRFSKSFYVQCVHFDGNDVGCNSFISKDIIYGTLQSMYK
QTLNFLKSSLRRVQKGKNFNTLGEFEIPEICLTEALINALIHRDYFISSS
IKVFIFEDRVEIISPGKLPNSLSVEKVRLGISIHRNPILNSLGQYLLPYS
GLGSGIRRIEAHYPSVKFINDTDKEEFWCVFSRSI
>Cag_0562 putative PAS/PAC sensor protein
MIKNTPLSNDLALLRAQAEELLTKGQQQLSDPSISPGDMQRILHELAVHQ
IELEMQQEQLLQARVELEESIECYTELYDFAPLGYVTLSRNGTIQQVNLT
ATKLLGIERSRLVGDYFGRLIVAEDIKAFQAMLEQVFVQQKHTSCEVKLF
NTRQQSTSPLLPSPAHNETLPHTIRIDAVLSTDGEECSVVVSDISMQKQI
ERENQALKEQLNQTLLPELTPNEITNSEIDDNNAADFNHALLDKVIHSRI
RFAILSYLSTAGKASFVTIKRQINTTDGNLSVHLRMLESAAYVSSDREIN
ENKMQTTLYTITEAGNHALQAYKRQLRAFLGL
>Cag_1260 transcriptional regulator, XRE family
MEQTLFTSVSDAAAFLADDNSIKEKVEQEIASSQLVNRLIQLRINKKVSQ
KELARQMGCDASKLSRMEAGTDQQLRMGDITDYLSALGVHVSLVFEDTTL
PAAEQIKQHVFAIHEQLENLANIARQVDGDNEIIEKIHKFYGEVLLNFML
RFSDSHEKLCMVSGYKSATPHKEEYIKKPLFAKPLTN
>Cag_0102 transcriptional regulator, XRE family
MTDKAFKYWHSMSDQALAAHIGNFVKHHRLEQNKTQNALSHEAGISRSTL
SLLERGETVTLATLIQVLRVLNQLQVMDAFEVQQRLSPLVLAKAEQEKRK
RARSTKTQDSEKSDW
>Cag_0166 putative transcriptional regulator
MLKAELLEIIANGENSGIEFKRDDIRPEQLAKEIVAFLNVQGGRIILGIE
DNGTISGIQRSDIQEWVLNVIRDKVHPQIIPFYEEITLDDGIRLVIITIT
KGISKPYVVRHNNREDVFIRLGDRSELATREQQLRLFESSGLLHVETLPV
AGTSFATLDIIRLDFYLRDLIKDPEMPTNEAEWISRLIGLGLMTDDGLGH
TVCTIAGLLCFGIQPRQYLRQAGLRVMVFSGTDKEYSSLLDTVIDAPLVG
RWQFNAIGKMQLIDDGLIEKFTAAITPFIGEEASDINELMRKEKIWHYPW
QAIRETVINALVHRDWTRNVDIEVTIYSDRLEVISQGRLPNSMTIEKMIA
GQRSPRNMLIMEILRDYGYVDARGMGVRTKVIPLMKNVNGQAPIFTATDD
YLKTILPRRKEE
>Cag_0845 transcriptional regulator, XRE family
MKCPSCGFAEMSDKVLEETLSYGGKAMTLHAMHGQFCSNCGEGIWDEESY
RRYTEAQEGLVRAVKGDPAADIRRIRKKLNITQANLALAFGVGKVAFSRY
ERGETRPPAPLVKLLKLIDRHPDLLDEMQKM
>Cag_0507 hypothetical protein
MSREVKIHLISESKSLVNSFFKKTIHNLPNNDSLISSGITITSIKTSDLK
FFPQNSALENTVLHFWDLSIDSSIPQSIYPLFMTPNSVYLLLLDNFNQNE
KFWLKLIKTHGKSSPIMILKDKSKGVFSIEEKSLNLEFPLIDNQFINVNF
DDDDDKGIVDFMENFAQLLMFKQNKCIIELQNSWLLIKEAIFKETEQVKF
ISKKKYKQVCYDKGVYNQTDSELLFEYLKNLSIILFFKEIPFADIYIINF
SDNSSNLCWLIDGINRILTSKKINNGCLYWRDLDFMLEDDEEKNIYDTKD
LYYILELLILLNVCYEIDKGCYLFPNKMPSDFVLSLPTNRSQTCFIMQYN
YLPFDIISRLMIMMKKDIIDDQYWVYGILLKSHNFSKLHASINPEAVNDV
TALIIADPDNKQIRITVYGPDRYRRHYFQVIWNHLHDINKKYDDLEVKEL
VPLPDRPDKLINYQDLLGYELHNIKKYPVLQSYRNYLVSDLLDTVIDNKK
VNKKEIVINNIVNNQNSESQVEYEKLQKDVLKLINAISEKISTLPNNEDE
KKLKSILNNTSNDLENIESPTYKKQLRQFIEMLQSNPHITNLVKFIANGP
DKVNAIIDLYNHIM