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2024-05-19 05:08:50

Gene list

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COG category: Transcription
Organism: Synechococcus sp. CC9902, CC9902

Number of genes found: 76

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. CC9902, CC9902
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Syncc9902_1067 putative transcriptional regulatorchromosome CDS1028378 498 - 0.538153
NA Syncc9902_1130 possible type 3 alternative RNA polymerase sigma factorchromosome CDS1094566 621 + 0.415459
NA Syncc9902_1600 transcriptional regulator, LuxR familychromosome CDS1548315 684 - 0.44152
NA Syncc9902_1731 secreted protein MPB70 precursor-likechromosome CDS1664751 1689 + 0.566015
NA Syncc9902_2196 transcriptional regulator, AraC familychromosome CDS2107990 966 + 0.52588
NA Syncc9902_1816 GCN5-related N-acetyltransferasechromosome CDS1739691 882 + 0.452381
NA Syncc9902_0448 DEAD/DEAH box helicase-likechromosome CDS464789 1377 - 0.446623
NA Syncc9902_1557 hypothetical proteinchromosome CDS1505578 1368 - 0.477339
NA Syncc9902_0682 conserved hypothetical proteinchromosome CDS690393 1371 - 0.598104
NA Syncc9902_0926 ROK family sugar kinasechromosome CDS916630 894 + 0.600671
NA Syncc9902_0607 DNA-directed RNA polymerasechromosome CDS615979 4095 + 0.528449
NA Syncc9902_1735 apocytochrome fchromosome CDS1668303 936 + 0.549145
NA Syncc9902_1678 Sigma-70 factorchromosome CDS1624646 1356 + 0.535398
NA Syncc9902_0905 possible type II alternative RNA polymerase sigma factorchromosome CDS895463 930 - 0.521505
NA Syncc9902_0079 conserved hypothetical proteinchromosome CDS78049 456 - 0.576754
NA Syncc9902_0593 conserved hypothetical proteinchromosome CDS600673 279 - 0.602151
NA Syncc9902_1420 two component transcriptional regulator, winged helix familychromosome CDS1385102 705 + 0.585816
NA Syncc9902_1771 two component transcriptional regulator, winged helix familychromosome CDS1702830 735 + 0.491156
NA Syncc9902_2139 metal dependent phosphohydrolasechromosome CDS2039223 2331 - 0.581725
NA Syncc9902_0385 putative transcriptional acitvator, Bafchromosome CDS399300 759 + 0.59025
NA Syncc9902_1946 conserved hypothetical proteinchromosome CDS1861705 1446 + 0.580221
NA Syncc9902_0287 transcriptional regulator, LuxR familychromosome CDS298826 279 - 0.491039
NA Syncc9902_1738 transcriptional regulator, XRE familychromosome CDS1671072 822 + 0.549878
NA Syncc9902_0067 conserved hypothetical proteinchromosome CDS66229 735 - 0.555102
NA Syncc9902_1245 conserved hypothetical proteinchromosome CDS1210196 1200 - 0.555
NA Syncc9902_0565 transcriptional regulator, LuxR familychromosome CDS570789 720 - 0.581944
NA Syncc9902_0900 conserved hypothetical proteinchromosome CDS893482 519 + 0.539499
NA Syncc9902_2293 type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS2201132 987 + 0.533941
NA Syncc9902_2097 Negative regulator of class I heat shock proteinchromosome CDS2001894 975 + 0.588718
NA Syncc9902_0314 two component transcriptional regulator, winged helix familychromosome CDS325529 780 - 0.546154
NA Syncc9902_1481 Peptidase S24, LexA repressorchromosome CDS1432938 624 - 0.589744
NA Syncc9902_0377 conserved hypothetical proteinchromosome CDS390254 294 + 0.622449
NA Syncc9902_0130 transcriptional regulator, GntR familychromosome CDS139330 1002 - 0.596806
NA Syncc9902_1176 Transcription-repair coupling factorchromosome CDS1140587 3579 + 0.524448
NA Syncc9902_1138 Exoribonuclease IIchromosome CDS1103747 2025 + 0.556049
NA Syncc9902_0160 serine/threonine protein kinasechromosome CDS165513 1929 + 0.621566
NA Syncc9902_0010 NusB antitermination factorchromosome CDS11833 636 + 0.540881
NA Syncc9902_0606 DNA-directed RNA polymerasechromosome CDS614027 1905 + 0.524409
NA Syncc9902_1373 Cell envelope-related transcriptional attenuatorchromosome CDS1331864 960 - 0.56875
NA Syncc9902_1161 RNA binding S1chromosome CDS1126914 2355 + 0.495966
NA Syncc9902_1776 membrane-associated 30 kD protein-likechromosome CDS1706812 774 - 0.565891
NA Syncc9902_1866 Protein of unknown function DUF193chromosome CDS1793780 477 + 0.501048
NA Syncc9902_0519 putative DNA-directed RNA polymerase (omega chain)chromosome CDS532347 249 + 0.53012
NA Syncc9902_1855 transcriptional regulator, LuxR familychromosome CDS1786628 231 + 0.528139
NA Syncc9902_2077 Resolvase, RNase H-like foldchromosome CDS1984217 447 + 0.559284
NA Syncc9902_0402 putative transcriptional regulatorchromosome CDS417779 645 - 0.606202
NA Syncc9902_1488 transcriptional regulator, AraC familychromosome CDS1439752 1053 + 0.519468
NA Syncc9902_1189 putative type III sigma factorchromosome CDS1153644 375 + 0.570667
NA Syncc9902_2234 possible type II alternative RNA polymerase sigma factorchromosome CDS2142471 1134 + 0.589947
NA Syncc9902_1244 ATP-dependent DNA helicase RecGchromosome CDS1207719 2553 - 0.567959
NA Syncc9902_1494 response regulator receiver domain protein (CheY-like)chromosome CDS1446327 684 - 0.584795
NA Syncc9902_0034 DEAD/DEAH box helicase-likechromosome CDS33579 1596 + 0.599624
NA Syncc9902_2157 NusG antitermination factorchromosome CDS2057385 669 - 0.562033
NA Syncc9902_1978 DNA-directed RNA polymerase, alpha subunitchromosome CDS1881366 939 + 0.559105
NA Syncc9902_0139 type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS147667 999 + 0.542543
NA Syncc9902_1798 conserved hypothetical proteinchromosome CDS1725587 771 - 0.571984
NA Syncc9902_0308 two component transcriptional regulator, winged helix familychromosome CDS318785 747 - 0.57162
NA Syncc9902_1520 type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS1470572 942 - 0.539278
NA Syncc9902_2175 DEAD/DEAH box helicase-likechromosome CDS2079374 3192 + 0.611216
NA Syncc9902_0594 NusA antitermination factorchromosome CDS600948 1458 - 0.547325
NA Syncc9902_0012 serine phosphatasechromosome CDS14074 1410 + 0.56383
NA Syncc9902_0605 DNA-directed RNA polymerase, beta subunitchromosome CDS610672 3294 + 0.525501
NA Syncc9902_1566 hypothetical proteinchromosome CDS1514451 1029 + 0.36346
NA Syncc9902_1923 possible Pex proteinchromosome CDS1837455 396 + 0.55303
NA Syncc9902_1407 DEAD/DEAH box helicase-likechromosome CDS1370207 1875 - 0.559467
NA Syncc9902_0179 Ribonuclease IIIchromosome CDS184800 750 - 0.582667
NA Syncc9902_2251 Urease accessory protein UreGchromosome CDS2160888 606 - 0.542904
NA Syncc9902_0297 NADH dehydrogenase I subunit Mchromosome CDS308895 348 - 0.574713
NA Syncc9902_0153 two component transcriptional regulator, winged helix familychromosome CDS159963 762 + 0.576115
NA Syncc9902_2107 two component transcriptional regulator, LuxR familychromosome CDS2010546 738 - 0.607046
NA Syncc9902_1567 transcriptional regulator, AraC familychromosome CDS1515479 957 + 0.410658
NA Syncc9902_0979 transcriptional regulator, LuxR familychromosome CDS960961 687 + 0.47016
NA Syncc9902_0295 putative Rubisco transcriptional regulatorchromosome CDS307292 996 + 0.557229
NA Syncc9902_0882 possible acetyltransferasechromosome CDS878642 504 + 0.553571
NA Syncc9902_2290 conserved hypothetical proteinchromosome CDS2197011 462 - 0.606061
NA Syncc9902_1291 putative SOS mutagenesis protein UmuDchromosome CDS1247863 444 + 0.619369