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# Prochlorococcus marinus str. NATL2A, NATL2A

>PMN2A_1196 response regulator receiver
MTCILVVDDEPAVLKVLVTRLNLAGYKVLSAQDGEQALEVFHKEAPDLVV
LDVMLPKMDGFAVCRRIRAESCVPIIFLTALEAISERVAGLDLGADDYLA
KPFSPKELEARIATILRRVGPAPTIDEPREVPSGQGVMKLGDLVVDTNRR
QVSRGGERIGLTYTEFSLLELLFRDPGRVVPRAEILEQLWGYPPRRAADL
RVVDVYVARLRGKLEPDPRNPELILTVRGIGYASQRIGEFPTAIAS
>PMN2A_1016 DNA-directed RNA polymerase, beta subunit
MSRSAIQVAKAATYLPDLVEVQRSSFKWFLDKGLIEELDNFSPITDYTGK
LELHFIGAEYKLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQ
EVFIGELPLMTERGTFIINGAERVIVNQIVRSPGVYFKDEQDKNGRRTYN
ASVIPNRGAWLKFETDKNDLLHVRVDKTRKINAHVLMRAMGLSDNDVIDK
LRHPEFYKKSIDAANEEGISSEDQALLELYKKLRPGEPPSVSGGQQLLQT
RFFDPKRYDLGRVGRYKINKKLRLTIPDNLRTLTNEDVLSTLDYLINLEL
DVGGATLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETD
SLTPAQLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGP
GGLTRERAGFAVRDIHPSHYGRLCPIETPEGPNAGLINSLATHARVNEYG
FIETPFWKVENGRLIKEGDPIYLSADLEDECRVAPGDVATNEEGKIMAEL
VPVRYRQDFETVSPEQVDYVQLSPVQVISVAASLIPFLEHDDANRALMGS
NMQRQAVPLLRPERPLVGTGLETQVARDSGMVPISKVNGKVTYVDANAIV
VTDDEGNDHTHYLQKYQRSNQDTCLNHRPIVFNGDPVIVGQVLADGSACE
GGEIALGQNVLIAYMPWEGYNYEDAILVSERLVKDDLYTSVHIEKYEIEA
RQTKLGPEEITREIPNVSEENLGNLDEMGIIRIGAYVESGDILVGKVTPK
GESDQPPEEKLLRAIFGEKARDVRDNSLRVPSTERGRVVDVRIYTREQGD
ELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRILPREDMPYLPD
GTPVDICLNPLGVPSRMNVGQVFELLMGWAASNLDCRVKIVPFDEMYGPE
MSNQTVQAYLKKAAKQPGKSWVYNPKDPGKLLLKDGRTGEPFDQPVAVGY
AHFLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALE
AYGAAYTLQELLTVKSDDMQGRNEALNSIVKGKPIPRPGTPESFKVLMRE
LQSLGLDIGVYTDDGKEVDLMQDVNPRRSTPSRPTYESLGKEYEE
>PMN2A_1049 urease accessory protein UreG
MESKLRVGIAGPVGSGKTAIIQRLCENLKDRLEIAVVTNDIYTQEDAKFL
TNSKALAPERIKGVETGGCPHTAIREDCSINRIAVEELEHKFTTLDLVFV
ESGGDNLAASFSPELVDVCIYIIDVAAGDKIPRKGGPGITRSDLLVINKI
DLAEMVGASLKIMERDTLLMRKNLPWCFTNTKTGEGIKIIEGFLCNQIPS
VHKMV
>PMN2A_0814 conserved hypothetical protein
MIKSYLGYIEIIEMVSRRLTKTQKTEILEAYRSGDNTNALAEKYNCTPNT
INRTVKTLLSESEYTLLKKKRSKIINKKEKLVENEKVKQEKEDLENESLL
ISFKEKIKEEDQYLKVNEEYHRLGVDEITSLDPEDADGFVEDQYSVIQKS
KDYDKDINNQNFDDNFEEIAPLVSGFDFDLQKQKSDFEILDYECLPESVY
MIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQ
RVIKIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN
>PMN2A_1231 acetyltransferase
MKPIILIKHLNGAPGLRLFGLGPKCIPVNAIDQLKNLLENQSFWAKGRKK
NEIKKMIKNSSCVITLWQKNRLIGFGRATSDYIYRAVLWDIVIVKDQQNS
GLGKLLVNSLLSSKSIKKVEKIYLMTTNSQDFYKTCQFEEINTQSLLVYK
YIDQQN
>PMN2A_0637 response regulator receiver
MTLIPADQLATEQIQGSPTGSSPIQATTQSPSKVLVVEPHPTLRTVLVQR
LRQDGQLAAAVGSAEEAVDLCRDQSPDLLVSAELLEKSSALRLAQQLGCS
VIVLTARTGVEPVVGLLDDGADDVLRKPFGLEELAARCRTLLKRGRIGLQ
ERVAVGPLEVHLLLRQVTLREKPVELSPREFALLCALLMPPGMVRSRHEL
LRMAWPPFSGGPRSVDTQVLTLRRKLEQAGLGDGGGITTVRQHGYRFSLD
NLPT
>PMN2A_1207 type II alternative RNA polymerase sigma factor, sigma-70 family
MTTAVEAPKTKNSSSAASARSVTDIDLVRSYLRDIGRVPLLSHEQEITLG
RQVQDLVSLENLETELESDLGEKPDINFFADKAGISPIQLKKKLKSGRRA
KERMVAANLRLVVSVAKKYTKRNMELLDLIQEGTIGLVRGVEKFDPTRGY
KFSTYAYWWIRQGITRAIAEKSRSIRLPIHITEMLNKLKKGQRELSQELS
RTPTLKELSEYVELPETDVKDLMSRAGQPVSLETKIGDGEDTILLDLLSN
EIDMPSEQIESDCMKGDLETLLEQLPELQNRVLRMRYGIDGDDPMSLTGI
GRVLGISRDRVRNLERDGLRGLRKTGDSVEAYMAS
>PMN2A_0828 peptidase S24, LexA repressor
MPEETLTTAQQELYDWLVDFIGDHHHSPSIRQMMQAMGLRSPAPIQSRLR
HLQQKGWIKWQEGQARTLQLIEESISGVPVLGAIAAGGLVETFDDVQETL
DLNSVLQLKGLFALTVNGDSMIDSFIADGDMVLMEPVNEPARLRNGTIVS
AMVPGLGTTLKHFFRDGSLVRLEAANTSYDPIEIDAEQVHIQGKLAAVWR
KT
>PMN2A_0275 putative SOS mutagenesis protein UmuD
MGSNRSRSSSTEGLSSLLIPTISAGFPSPAEDYIELGIDLNKYLIKNPIS
TFFLRVSGNSMNNAGIYNNDLLIIDRSINPNPGHIVVALLDGEFTLKRLI
KKQDSYYLKADKENYPAINLYEYIDIQIWGVAIYSIHELQQSKV
>PMN2A_1179 ribonuclease III, bacterial
MKISNHRVEEIINFIKGLKLDQKFQKEFTKEKIKNILYINESLTHSSANS
EINYENLEFLGDAVLRLIASDFIKNKYPYMQVGERSELRSHLVSDLWLEE
VGKKIEINSVLVIGNKALRDKSANATIQAEATEALIGALYESLTIVEPIK
DWLIPFWEEKSKEVLADPHKKNYKSALQELTQSKGLSIPIYKTIEIDKKH
DNPKRFFCNVYVKNRSIAEGSGKSIKQAEKNAASKALKYFENNVIDQ
>PMN2A_0298 prokaryotic chromosome segregation and condensation protein ScpB
MSESIQISLPAKIEAILYLKGRPTSSKEMAELLDKDIAEIEKALWELKAG
YAQRDTSLEINENKSHYSLELRQGLGELVQDLLPADLSIATLRTLATVAL
KKKILQSELVDLRGSGAYDHIKELVEKNFVERRRQKDGRSFWLTLSEKFH
QTFSVLPEPDQAEDKKAA
>PMN2A_1015 RNA polymerase I subunit A, N-terminal
MTNSNLRTENHFDYVKIKLASPERVMEWGQRTLPNGQVVGEVTKPETINY
RTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESR
VRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVV
LDIGDSKDLKYKQLLTEDEWLEIEDEIYAEDSTIENEPIVGIGAEALKQL
LEDLNLKEVAEQLREDIATSKGQKRAKLIKRLRVIDNFIATSASPEWMVL
DAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR
QNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQN
IVNNIKAAKKLIQKADDEVMQVLQEVIEGHPILLNRAPTLHRLGIQAFEP
KLVAGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLMLASNN
ILSPATGDPIVTPSQDMVLGSYYLTAIQPQSKQPKFGDYSNTYASLEDVL
QALEDKRIDLHDWVWVRFSGEIEDDDELQNPLKSETLKDGTRIEEWTYRR
DRLDEDGSLISRYILTTVGRVVMNHTIIDAVAATS
>PMN2A_0369 transcription-repair coupling factor
MSLESIAKYLENHHLTTELIERTNREERLILTGASRTAKALITTSLAKNE
SKRLLVIVPTLEDATRWYPLVKDCGWTKTCLYPTSEVSPYETTQVTSEII
WGQLQVLSDILELKDDENIAIIATERSLQPHLPPFEHLREKCIKLNVGDE
INLSDLSLKLSESGYIKSNNIDQEGTWTRRGDIIDIYPVSSELPIRLELF
GDLLDKIKEFDPISQRSLDQINNVCITPTGFDPLIINKLISTDNKDISSL
FTNDEFSELVDSNKLDSAKKYLGVAFDKPSSLLDYLDDKTFIVVDERFQG
ISHGKAWYNIVNDNYTDVITTIKGSEATKTIFKPNLHKDINDIYDSLNNY
KGIDITDLEDTTKKTNVFSISSKVHNWLPNQYGKISLSLKDYIKNKYSIW
IISAQPSRAVSLLEEHECISKFIPNNTDLNGIKNIIDDNIPVAIKNKNEG
EIEGFYLPAWKIALLTDKEFFGQQNISTTGYIRRRKQSQSKKIDPNKMKP
GDYVVHRNHGIGLFQKIEKLNINGESRDYLVIKYMDGKLSVAADQLGSLG
RYRSSNAKTPTISKLGGANWNKIKEKAKKSVKKVAIDLIKLYAERSKEKG
YKFPCDGPWQNELEDSFPYALTPDQATATSQVKSDMESEKPMDRLVCGDV
GFGKTEVAIRAIFKAITSGKQIALLAPTTVLSQQHWRTISDRFAPYPIKV
SLLNRFKTNSEKKHIVSGLKDGQIDAVVGTHQLLNKKLVYKDLGLLVIDE
EQRFGVNQKEKIKELKKSVDVLTLSATPIPRTLYMSLSGVREMSLITTPP
PLRRPIKTHLAPLDNEIIRSAISQEIDRGGQIFYIVPRIKGIEDVAEKLK
IMIPNVKLLIAHGQMEEGALENAMLAFNAGEADILLCTTIVESGLDIPRV
NTILIEDSHKFGLSQLYQLRGRVGRSGVQAHAWLFYPSDEKLNETSRQRL
KAIKEFSDLGSGYQLAMRDMEIRGVGNILGIEQSGQMETIGFDLYMELLQ
ETIAEIQGQDIPSVDDTQIDLPVTAFIPGDWITDPDEKINAYRLATQCEN
NDSLVQFASNLVDRYGTLPKAVESLIEVMKLKIIAKKCGFSRIKLSKPNV
ELETMMDEPAFKLLRKGLANHLHGRFIYKKGDKCSTVTIRGLGILDSDKL
LDQLTEWLKLMNSEINA
>PMN2A_1338 Protein phosphatase 2C-like
MKENSPISEQQNQHPTNIFSSAASKSLSDLVHSLSQEQVVNQDLLLSLSF
ALRSFTNLQRFLELIPLLVTQLVGVKGSLLIPFQDNGSLWREQLQMVPID
EDQELFRKLFLLEKGKKTGFGMEGKNIEMLDCLVQRHLDSSNVIATSIVS
RGRQRGRLYAFDKKEIVFGSNVHRKHIQIVADLAGVAIENDAIFQVIRNH
EKVDRQISIGAEIQSQLLPDQCPVIEGVELAACCRPAFQVGGDYYDFMPT
RSDLNETAKASGRWALVIGDVMGKGVPAGLLMTMLRGMLRAEVLTGLPPD
SILHDLNQLALEDLTQSHRFVTLFYSDYDAKSRKLRFANAAHNPPLLWSS
KTKSINRLDTPGLLIGLQPEAEYGCGEIFLQPGDVLLYYTDGVTEAPGIS
GERFDENRLITFLDKFAKEGLGAKQILNKLFERLDGFVGVSDHHLEDDAS
MVVLKVKESTVPELT
>PMN2A_1520 regulatory protein, LuxR
MFTGEIANSSHMGLSAREMEIIGLVADGLTNQEIAEKLTISKRTVDNHVS
NMFTKTGSKNRVALLNWAMDHGKICRDGFNCCSLPDDETDS
>PMN2A_1500 response regulator receiver
MTATSPSKETILVADDEASIRRILETRLSMIGYQVVTACDGNEALDLFRN
CEPDLVVLDVMMPKLDGYGVCQELRKESDVPIVMLTALGDVADRITGLEL
GADDYVVKPFSPKELEARIRCVLRRVEKEQIAGLPNSGVIAVMNLKIDTN
KRQVYRNDERIRLTGMEFSLLELLVSRSGEPFSRGEILKEVWGYTPERHV
DTRVVDVHISRLRSKLEDDPANPELILTARGTGYLFQRIVDSMIPEGS
>PMN2A_1513 RuBisCO operon transcriptional regulator
MAEIPFTLDQLRILKAIVDEGSFKKAADSLFVTQPAVSLQVQNLEKQLDI
AIFDRGGRKAQLTEAGKLLLNYCEKILGECLETCKAVEDLNNLKGGSIII
GASQTTGTYLMPRMIGVFRQKYPEVSVQLQIHSTRRTGWSVANGQIDIAI
IGGQLPLELNELLEVIPFATDELALVLPTNHPLAKSKELTKEDLYSLRFI
TLDNQSTTRKVLDQLLSSSGLDVQRLHIEMELNSLEAIKNAVQSNLGAAF
LPVVSIERELSGGSIHRPIVADLEVKRELKVITNPGRYSSRAAEAFTRDI
LPLFASSFSPLFNPQN
>PMN2A_1024 nucleic-acid-binding protein implicated in transcription termination
MSQNPILRRCIACKKVLDRKYFLKVTRDFQNGVVFSGGMGRSAYLCPTES
CFEEALKRKRLQKSLRCDIHSSVFNMLQKQLNTCIDSDTEA
>PMN2A_0446 regulatory protein, ArsR
MSSAVDSEIVSDKTKKLLKALSEPLRLQIIEALSSGEKCVCDLIEEMGLA
QSKISFHLKVLKDAELIIDRHSGRWVYYHLNIEALNSLQNWIVLLKENSQ
RSTKDCC
>PMN2A_1135 conserved hypothetical protein
MLEVHSHKHLKKYYQKNLALWPHNLTLARLISRSLSRKDNTFIQLSSDSR
NFWWPGLLIPLCLHNNNIVLILSERQYRLLFEVELPKLSSSRLGFDYVEG
IELIPSDEKIWVLRYQDLIFANEKDLLKNRQLIFPESEFISNELRESMSI
KITPKDWQNLIASRSRFEASIIEAHERLSRSLFSHSLSSDAVIRIDYKEL
LALKEILKDDLPSIMPWRRALNVVNNRWVTWAKLDNQKLSWDWYIQPLLP
LQTLSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVDLGNKYDQEP
IPLFVPKRQPLPNTSHFYRHIIRQCQRLILGRTHPTIVLVDDLQLRLQIT
SELAGEFGLRVVHETTNIETNGIVCCSCQWWIVNQYNLPTPDQLIFPVIP
LPTLESPWIAAKVEMLKHQGRDWFREFLFPETLAILLKSLAIIRGKDVRV
AILDGRMRYRNWGKLIFEALEPWVALERLLPY
>PMN2A_1558 RelA/SpoT protein
MPKVTSSQNSNQTNTVCDQFFDGQPRLRTHQIKHIDDYEIILPEWLKNCI
ENIPPGIGASCPRDSEALLVAAFDLAYQLHKGQFRKSGEPYITHPVAVAD
LLREIGASASVIAAGFLHDVVEDTDITPEQLEGYFGSEVRYLVEGVTKLG
GIHFNNRTEAQAENLRKMFLAMSSDIRVVLVKLADRLHNMRTISYLGEEK
QTRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPDPFREIQQQIAS
KRSEREERLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKKE
FHEIFDVAALRIIVSDVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY
QSLHTAVIGRHRPIEVQIRTPEMHRVSEFGIAAHWKYKEGGSPANPDSEK
FNWLRQLVEWQQEDGVNDHNDYLASIKEDLFDEEVFVFTPKGDVLGLRNG
STAIDFAYRIHSEVGNHCNGARINDRLCVLSTPLENGDFVEILTHKSSHP
SLDWLNYVATPTARNRIRQWYKKSHRQETISRGKELLEQEFGRKGIDNLL
KGHAITKVAERCNLKSTEDLLAALGFGALTLHQVINRFREEIKILNQVPE
TELSDLELATQIGTQANLASNKSKVSQTKYSPIVGLEGLDYRIGGCCSPL
PGEAILGTVALGNHGITIHRTNCVNIESIPNSRRLSVQWNTNARIKEEKF
PIQLRIEVIDRVGVLKDILMRLSDRGINVIDARVQTSHGKPECIDLKVEL
ESVNQLEITINQIRSMVDVLDIART
>PMN2A_0856 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)
MVSTAPKPAESQKRRSSDPISWYLSSIGRVPLLTPAEEIELGNQVQTLMS
LTEDGQIKEQSKEFTSHQRRLIRIGRRAKERMMKANLRLVVSVAKKYQGK
GLELLDLVQEGSLGLERAVEKFDPTRGYKFSTYAFWWIRQSMTRAIACQS
RTIRLPVHLSERLATIRKVSLDLAHKLGAMPSRIEIAEAMEIELEELDSI
LRQALTTSSLDAPVNGDEGRSFLGDLIADGSGEEPLDKVEQKIHQEQLGR
WLSHLSEQEQHVIRLRFGLEGNERHTLAEIGRLLQVSRERVRQVELKALR
KLRNLTRKLPSGI
>PMN2A_1798 RNA-binding protein
MNTVPIQIMDLTTLKAVVFELSQEIVPSRFETAQQIDSHTIQLGLRTLEK
LTWIEISWLPESPIIVSIPPPKKYGEKSTLAKQIKHLLVNLALVDITQIG
FERIVRFKFSSRPGKEIEKELIVELMGRHSNILLLDRSGKVITLGKQIKE
SQSRLRPIGTGDIYTSPPPLKGLVPVLSEPFNSWKENICLVPSTFKNSLK
DTYQGISPALTLQIVSSDYNESLKIINKPVTSIELETWEAIYKRWKEWLL
DLENSNYTINFEGPTDYIVWGKKESTAKNKKIGLSLSIYYSNKIVERKIN
SIREKLKQDLANSKGHEKRKLDVQELLIKNISEYTTMQNKAKSLLTLPSP
TKKQIIEAQSLFKEAKRKKRSRESIVNRINFHKKKISDIQCCESFIDSFL
YEENEDNKNKLESIIELKEEVEEYICIKKNNSKFKLKRKKETSLHIKEIQ
SPSGLKIQIGGNNRQNELISLKKGKKGDLWFHAQEIPGSHVVLKSSDGIV
DETDIQLAADLASFFSRARGNKLTPIIMVPIENLKRISGSLPGTVSHRGG
KVLWGKAERAAKYFHHK
>PMN2A_1892 acetyltransferase, GNAT family
MINLGSTKIGMSGWKNEKLLSDETLKNIYGKQAFQYFNQTNSSLFVFSHS
KSFDLIELEQLLQAVGWGRRPLRRVKRALDNSLIKVGLWQHDPKFPKLIG
FARCTGDGIIDATIWDVAINPVYQGYGLGKQLMEYLMKSLKREGISRVTL
FADSDVITFYKRQGWTLEPKGNKCAFWYSN
>PMN2A_0291 conserved hypothetical protein
MSVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDS
IFSTGLKEVFSKFTSGYKPSEHATKLFDAICNCNGFNPTEINNSSEQLVS
NAKSFTKEDLNSFLSKTNNDNKGYDYYSRINAIGIYKLVSEMPLFKEVKE
EDLNKEINDISKSLGYQYSRVEKDISMYKSNIEKMKQALEIIALNLKTK
>PMN2A_1014 HPr serine phosphorylation site
MTSSSPKTRKSSTKSKAKRGSKSKKAAEIIAVQRLSKTPPPFRNKVVDKK
VLKNLVAWAFKHHGTAATAAMADNLKDLGFRYATQAAVSISVDDLKVPEA
KQDLLGQAEELITATEECYRLGEITEVERHTKVIDTWTETNERLVDAVKK
NFNQNDPLNSVWMMANSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIRT
NFREGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVRE
EDCGTTRSILISAEDGKFGNRLVGRLTSEQVVNADEEVLAERDTPIDPQL
SKKFEQSNMQGVRVRSPLTCEATRSVCRKCYGWALAHNQLVDLGEAVGIV
AAQSIGEPGTQLTMRTFHTGGVSTAETGVVRSTLSGKVEFGSKARVRGYR
TPHGVEAQQAEVDFNLSIVPTSGGKPQKIDIPIGSLLFVDNGQNIDIDVT
VAQIASGTVQKSVEKATKDVICDLAGQVRYETIIQPREVTDRQGNITLKA
QRLGRLWVLAGDVYNLPPNALPVVSGNVSVKEGQVLAEASQASEFGGEVR
LRDSIGDSREVQIVTTSMTLDDFKLLEESTHSGEIWHLEAQDNTRYRLNT
IPGSKIGNNEVIAELSDDRFKTETGGLIKYAPGLTIKKARSAKNGYEVSK
GGTLLWIPQETHEINKDISLLMIKDRQWIEAGTEVVKDIFSQTAGIVTVT
QKNDILREIIVRSGTFKLCKESKALDRFEGDGQIVNPGETIAKGIKTDSM
VMVQSVETPEGKGLLLRSVEEFNIPDQAQLPELKHVKQPKGPSLGVKASQ
RLAYKDGELIKSVEGVELLKTQLMLETFDTTPQMTVDVEVIQDLNSKGDR
LKLVILESILVRRDTTSDSSHGSTHTELQIENAQVVSAGDVVATTQILCK
QEGVVQLPDAVDGDPVRRLIVEREEDTITIDSKGTTLLKVGQRVVDGDFV
SKDQSIDACGEIENIDGKKVKLRLGRPYMVSPDSVLHVRDGDLVQRGDGL
ALLVFERQKTGDIVQGLPRIEELLEARRPRDSAILCKKSGTVDIKKGDDD
DSVVVSIIEDNDVISEYPILLGRNVMVRNSQQVIAGEFLTDGPVNPHELL
ECFFTDLRDKKPLMDAAQEAIAKLQHRMVSEVQNVYKSQGVAIDDKHIEV
IVRQMTSKVRIEDAGDTTFLPGELIELRQVEDTNQAISITGGAPSEFTPV
LLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGR
LIPAGTGFSGFVEELNAEAGPHPDILAEDPAGYRRIQNLRPDYTVDMPSS
PVAKNTAVLDDPSEEDLEATRSRHGIDPTTSNFAAFARPVGDDELSAEDQ
MPDPAALEGLQEEGLLSDE
>PMN2A_1572 transcription antitermination protein NusG
MSEIETTPAKDSKIIDRSEASEDDQSSFANQSIKTNIARWYAIQVASSCE
KKVKATLEQRAITLGVSDRIIEIEIPQTPAVKLKKDGSRQTTEEKVFPGY
VLVRMVLDEDTMMAVRSTPNVINFVGAEDRRATGKARGHIKPRPLSRQEV
NRIFKRAAEKKTVVKLDVEEGDQIVVTAGPFKDFQGEVIEVSGERNKLKA
LLSIFGRETPVELEFSQITKQN
>PMN2A_1690 Protein of unknown function DUF193
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPIN
VLKRSGAKELFNRSKIINGLNRACEKTLIHGSKIEFIVDEIELELHQGVC
KEIKSIEIGEMVLTHLKDINEVAYIRFASVYRQFNGINDFMKTLEALKPI
KKEQLASVI
>PMN2A_1146 GNAT family acetyltransferase
MLGLNSANKCPQIPEGFLLLRSELISIRKINRLLSRCNQDTHQPRKLELA
LKNSDFYLTLIRKTPENLVGFVRVTSDKGLNANLWDLVAEPGDQQEKYMS
IIVFKAIEIIRRELPGCSISVAAPLISLDSLKANGFLLDPNGIKTMGFRL
>PMN2A_1494 response regulator receiver
MKPCILLIEDDQDMRDLVAGHLEHTGFDVQKAEDGIKGQALALQYAPDLI
LLDLMLPKVDGLTLCQRLRRDERTSAIPILMITALGGIKDKVTGFNSGAD
DYITKPFDLEELQVRIKALLRRTNRAPLGSNNQQEILDYGPLTLVPERFE
AIWFESPVRLTHLEFELLHCLMQRHGQTVAPSLILKEVWGYEPDDDIETI
RVHVRHLRTKLEPDPRKPRFIKTVYGAGYCLELPTGDKISEIQPSITQAR
ETNSFKNNTDERVIA
>PMN2A_1537 regulatory protein, LuxR:Response regulator receiver
MSDPNPSTQEVSQTPRILLVDDEPGLRTAVQAYLEDEGFQVTTAVDGEEG
WEKAQKMIPDVIISDVMMPRCDGYGLLKKIREDERLGGTPVIFLTAKGMT
ADRTQGYQAGVDDYMPKPFDPDELVARVKNVVQRQERLLTEAARFANADV
GQMAKQITEIKSMLSHGDKNHSRKDDSIPNFTPREASVLQLVAEGLMNKE
IARQLETSIRNVEKYVSRLFIKTGTSSRTELVRYALENHLVT
>PMN2A_1216 regulatory protein GntR, HTH
MRFHIQQDSEIPASSQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHR
NTISKVYRQLEKDGVVEAIAGSGIYVRDQQKQKDLRSSSHALRKKGIQDI
DHEVRKSIDELLNTGCTLQQTRELFTREIDWRLRCGARLLVSTPREDIGA
SLLIAEELAPHLDVPVEVVPMEELESVLESSSKGTVVTSRYFLQPLEELA
NRHQVRAVAVDLSDFQKELTILKKLRSGSCVGIVSISPGILRAAEVILHS
MRGNELLLMTANPDVGSRLIALLRAASHVICDSPSLPLVEHTLRQNRSQL
MRMPQIHCAHKYLSDSTIEELRKEIGLLE
>PMN2A_1336 antitermination protein NusB
MQLKSISRELALLLLGQIKKKDINKLNIESLLSKAIESLTQHWREQLDSC
ASQLEKANQELLDSEFQVDAGLLIKSQNHLKTCLIDSENILNCLSESIEL
PRLLALVDQKEIRELALRRVDLVIEKQDEIDHKLDSVMEGWRLKRLPRID
SDILRLAWVDLIDFNTPMAVTCNEAVNLANRYSDEQGRRMINGVLRKLQN
SALILNLK
>PMN2A_1106 DNA-directed RNA polymerase, alpha subunit
MLQYQIDRIDHQVSNDRSQTGVFLIGPLERGQATTLGNSLRRVLMGGLEG
SAVTAVRIAGVNHEYATIPGVREDVLDILLNCKQISVDSRSQELEIGRLV
VTGPADVKAKDIQFSSQVEVVDGDRPIATVQEGHNLELEIHVERGVGYRP
VDRKNEETSAIDLLQIDAVFMPINRVNFTIDETAVAEGGSTRERLKMELV
TDGSTSPDDALAEAANQLIELFQPLATVSMVEEIPEEPEPAAEAQIPLEE
LNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTSA
>PMN2A_1023 transcription termination factor NusA
MALVLLPGLNNLIEDISEEKKLPSQVVEAALREALLKGYERYRRTLYLGI
SEDPFEEDYFSNFDVGLDLEEEGYRVLASKIIVEDVESDDHQIAIAEVMQ
VADDAQVGDTVVLDVTPEKEDFGRMAAATTKQVLAQKLRDQQRRMIQEEF
ADLEDPVLTARVIRFERQSVIMAVSSGLGRPEVEAELPRRDQLPNDNYRA
NATFKVFLKEVSETPRRGPQLFVSRSNAGLVVYLFENEVPEIQEGSVRIV
AVAREANPPSRAVGPRTKVAVDSIEREVDPVGACIGARGARIQQVVNELR
GEKIDVIRWSSDPVQYICNSLSPARVEVVRLVDPEGQHAHVLVPPDQLSL
AIGREGQNVRLAARLTGWKIDIKNSQEYDQATEDSEVAELISQREEEESL
QREAEKRLEAEQTARAEEDARLRELYPLPEDEEDFQNEELSNIDSNETES
ESDFESSEIDSNIDTDDAETEESDIDETIEDTVTAKDKIITEEEGTR
>PMN2A_1829 sigma-70 factor
MLKEKQTSKNISINQDPKNNSKKIKKTAAKLNVTKETQTLPQESSNDLKI
DLDLEADKLIAEANKVPEADIDLDDDDDNASVLSSAQEAAAKALASIKIG
PKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEEEAAQFES
ENGHFPSVKEWAVLADMPLARFRRRLMLGRRAKEKMVQSNLRLVVSIAKK
YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAI
ADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEK
LRFIAKSAQLPISLETPIGKEEDSRLGDFIEADIENPEQDVAKTLLREDL
EGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKA
LRKLRHPNRNGVLKEYIKLN
>PMN2A_1302 GCN5-related N-acetyltransferase
MASFSSLNRYLRPCESSDEMALREVYEDAIRTCDKSLYSQEQIEAWSALA
YLPGILDKPLKQGVGWVSCVDKTIEAFALKYPHNRLALLYCRGRSSRQGH
ATALLHQIEADTLTDKPITLKTEASLCSYQLLLRHGWTIIAPEEIQIGGV
HFSRYLMEKTLY
>PMN2A_1305 type II alternative RNA polymerase sigma factor, sigma-70 family
MGIPLESAKEISDVSSGKSNSASTSQKLSASTVSSQKSRSSRRQSNRLAT
DAIGFYLTSIGRVPLLTPAEEIELAHHVQQMKDLLNLPLEERSTRQKHKI
KMGKRARDRMMAANLRLVVSVAKKYQNQGLELLDLVQEGAIGLERAVDKF
DPAMGYKFSTYAYWWIRQGMTRAIDNSARTIRLPIHISEKLSKMRRISRE
LSHRFGRQPNRLELANAMGIEPQDLEDLVSQSAPCASLDAHARGEEDRST
LGELIPDPNSDEPMEGMDRSIQKEHLGGWLSQLNEREQKIMRLRFGLDGE
EPLTLAEIGRQINVSRERVRQLEAKAILKLRVMTTHQNAA
>PMN2A_0341 exoribonuclease R/ribonuclease II
MGTKIIEDEIKDIIFRSNTSNNLNSAVKDLTHLKTYTIDDSKTVEIDDAI
SLEQVSGQNKLWIHIASPASYIEYQSGIDEKARKLVSTVYLSNNTYYMLP
KALINNVFSLSDKEKRESLSLGVILNDDGSISSTEIVQSLIQVDYRLDFI
EADELIDYAPKEEIDLSLISTILESRKSWRKNLGSIEILESYGKIVVEDK
IPNIKIIDPTLSRQLISEAMILYGDIISNFTKLNKIPVPYRVQERSDKVS
NDNIQLSDNKILYNFLLKKTMGKTYYSINPMQHDSLALTSYLHATSPIRR
YADLLVHYQLNRFLNNKVLISKDDVQQIIHEINIQGRQNIMRFREDQKYW
LGKWFENNTFNEYSVILLNWINRYKNTCLLYFVDYNFSTISNLHSKLNIN
IGDNFNVKNTNHDNNDMNNFEIIQ
>PMN2A_0160 ATP-dependent DNA helicase RecG
MVEGYNKNITSSDSKPTPDRQSSELTTWIRSLQQALTVEVDHGFINIQGR
TNKFSNFVTGYLLSGPSTAVNEFDFSRLQELALDYEKYQTMSTDDRRKII
VQTRQALHTLFKYKEGEERAEPNKLKIRRSQESTLHKRSSSAYSLSLQST
ISSVKGVGSKQAERLSTLGLILIRDLINYFPRDYVDYSSLKTIDKTQAGQ
NVTIVAKVRRCSSFKSPKNPNLAILELFIKDKTGGMKITRFFAGRRSSSI
AYVKSQQSLYPVGATVAVSGLVKESKYGKSLNDPLIEIIDSPNDYLKSRT
IGQILPVYSLTEGITADKFRDLIQSILYLTSNIKDPLPKETLNRLDLPNR
KEAFFHIHNPENSMTLAKAKRRIVFDEFLLLQLSLLLRRDLHKKSDSPQL
SIEPNINSLVGKFLSILPFSLTNAQRRVLKEIESDIVKAEPMSRLLQGDV
GSGKTVIAISALLTAVQSGWQGAFMAPTEVLASQHFQTLSKWIPQLEINV
DLLTGSTPKSRRKQILTDLVNGSTKILVGTHALFEDPVVFERLGLVVVDE
QHRFGVKQRNKLLNKGLQPHLLTMTATPIPRTLALTLHGDLDVSQLDELP
PGRTPINTQLISPNEKKYAYDLIRSEIKKGHQIYVVLPLIEESEKLELSS
AVDVHYQLSTEIFSEFNVELLHGKMKSVEKQEVIQNFINKKSDILVSTTV
IEVGVDVPNASVMLIEDSDRFGLAQLHQLRGRVGRGASKSYCLLSHQNKN
KLSRQRLDVLVNSNDGFEISEIDLRFRGPGQVLGTKQSGLPDFALASLAD
DADVLEIARKEARIILDSDPLLSNNSMLRLSIKEQWDRLKIGNKLN
>PMN2A_0360 RNA binding S1:Cold shock protein
MTSVLKILESLDCVDGLEVSKLERSLKITKKIDKDNLNVAIKALTKLGIV
QTIIDDKLTINNDRDFLRGRVRCSSKGYCFVVREDQGEDIYIREGNLNNA
WHGDSVIVLITKQGVRRRAPEGKIQCVLKRYNETLLAKVEPDKSTGELKA
YPLDDRIPATIELEDEIETNKKYPDKDLIHEIKITKYPIAQFNAKGSIVR
ELSINSGVEGDIELLLSKNYISKSLVAPKVAPKKISSKGRSDLTAQPSLL
FESWESTNSPSLPGLYAQPYEGGNRIWVHAPTISERINLGGKLDRYLRDK
GEVICLGNNWLEFLNESLRSASQFKINKECEAISLMIDINADGNITDWKF
TLSIIKPVKIITPKHLIAINNRKATSKSVPIALKGIKDNLEVLYTLLHSA
KIINNMNNISIKLDEYIPKLERLSELSKTFPGRDFNGWSKTYDCCDPQSL
IDIYIRLSNNILSKHLIGYRLPFIYKEHEEIDQSSINELTKSALALDKKI
TVNADGTITSSELIKSFESSTEKKILQKLVKHIIPGVNLKLYEINTPEDI
SYLNYDAAQTNIESPWCCPSLNYWNIFNQFILTLLLSEGKNKPTSRSKQT
VELGKNDSWREVDWEIFPSKLKEIIASHSNLRLINNLNEIRKKSKSFRNN
IISIAQGREAQKIIGKEVTAIITGVQSYGFFAEIDDLTAEGLVHVSTLGD
DWYEYRSRQNLLVGRKSKKTYQLSQKINVRVLKVDILKNQIDLELVNDTE
TETINTINVESDNDD
>PMN2A_1764 putative chloroplast membrane-associated 30 kD protein
MGLFDRLSRLIRANLNAFVSDAEDPIKILDQSVADMQEDLVKLRQAVAMA
IASQKRLENQANQAKEQIKNWFTRAELALKKEEDDLAREALSRKKTFQET
YESLSTQFQTQNGQVEKLKKSLLLLERKIAEARTKKDMLKARAQAAKAQE
QIQSAVGDLGSKSAMAAFERMEDKVEALEASGQAALELAGEDLESKFAAL
EGGDDIEKELETLRTQLKSGVEAIALPPSDLDVNEVKTVEIQEVEVELEE
MKKSMDNS
>PMN2A_0013 possible type II alternative RNA polymerase sigma factor
MSSLSDFLGEIGRHELLTPEQELTLGREVQAMVALNERCQQAGGHGPECE
YSSAEKKKFKAGERAKNQMITANLRLVVNLAKRYQGKGLDLLDLIQEGTL
GLTRAVEKYDPKRGHRFSTYAYWWIRQGLNRALSTQSRTIRIPVNINEKL
TKLRAAKSRLMQELGVHPSTNQIAIQMKIPLEEVEELLACELRSITVSLQ
GAVKSKADPSELVDILPSEEVPPMELAELAERSASAWSLLDKSNLTPKER
TILSLRFGLDGSNEWRTLAEVARQMNCSREYCRQVVQRALRKLRKTGIQS
GLLEKSI
>PMN2A_0436 response regulator receiver
MTSRVSDKISKAKRLLIVEDDKSIRETLNEALVAEGYQVEACKTGDEAEA
RVFSQFDTRKKIDLIVLDLMLPNLNGIELCRRVRKNNIKTPILIVSAKDS
ESDRVLGLEVGADDYLIKPFGLNELIARCRAILRRSETNHEKAQDSSQVL
SYKNISLYRQEYRVTKNSKEINLAPKEYKIMELFLQNPKRVWSRDQLLEQ
IWGIDYVGDSKTVDVHIRWIREKIEDDASDPDYIRTVRGFGYKFG
>PMN2A_1444 bordetella pertussis Bvg accessory factor
MYSEENFLMIGNTRWHWANKVKKDWKYFHTSPNPIEFKDKDYSQLTWASV
GPIPEDIKLCPSKEITLDNVPLNNLPTNLGIDRALSSWSAFKKQSFLKSK
EQDLIVIDAGTILSVTKVSNKGEFIGGQLISGFSLQLSSMSNRAMNLETP
IVKKIPTETFQYETHNAMIRGSMNALIGLILTLFEETKLPIWMCGGDAPI
ILNELKNTNIDINHSPNLVLEGMIDVYKKINSI
>PMN2A_0647 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
MTNKNPHEDSSCPVEQDVLEESSEEILEEIEQNSENGFSEFNFSEELIQT
ISDKGYSSPTPIQKAAIPELLLGRDLVGQAQTGTGKTAAFALPILERLKK
NVGHPQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDFRNQIN
TLRRGVDVVVGTPGRVMDHMRQKTLNTSHLSCLVLDEADEMLRMGFIDDV
EWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITIKATELKERLI
RQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGY
NVAVLNGDIPQNQRERTVERLRQGSINILVATDVAARGLDVDRIGLVINY
DMPFDREAYVHRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEK
MDIPDNDLINNNRIKKLQAKLIKAASTERDNPEEANILEELIKNVEKELD
IDPKDLTLAALNLAVGFNALLEKGNEDWIRQSAQRNTRNDRRDNNKFKQR
RRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEAGLKGRSIGRI
RIFENYSLVDLPKQMPDKVFQALKKVKVMNRELQINRAD
>PMN2A_0207 GCN5-related N-acetyltransferase
MDNLLSIKSLCDEDIDFVTEISRKEGFAPGVGDLRIYQNTDKQGLWVGWL
DNNPIGCIAGVRYNQYYGFLGLFLVIEEYRGRGFGLQLWKKALSHLSDLP
CVGLEAAPERITDYSKWGFTISSKTTRWQLLGDGKLVEEYSKNDDFDDFS
FVEGSSIPQDAVKKFDEKRETTPRPHFLSNWLNHPAGKVIAVIDKKNCCH
GFGRIRPCLLQNGDGWRIGPLMADTPMLLQILLKKLIESHPGLIIIDAPG
LNKSASEVFRKLGFKSESETFRMYRGSQPPVSMNDVYGLACLELG