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Gene list

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COG category: Transcription
Organism: Aster yellows witches-broom phytoplasma AYWB
Gene type: CDS

Number of genes found: 25

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# Aster yellows witches-broom phytoplasma AYWB

>AYWB_045 conserved hypothetical protein
MKQFKYYLLVLTKEDLYQEGFLGLIKALNNYENLDYDFITYTTPTIKSEI
KELIRKSNSP
>AYWB_571 conserved hypothetical protein
MTVLRTCIVSKKIQDIKKMIRINSTKQGKVSVDFNLALQGRGAYLTLKPE
YVILSQKKKLLDKKLKTQVPEEIYQILLKLIASKT
>AYWB_119 conserved hypothetical protein
MKKTKTPKSLLETAYDIMKKHQNPVSVYDLLKQTLQKHQISNNNPNLANQ
LYLDITLSGKFVFCENNQLIIKENNNFFWDKDFFEKTKTSNDEPLDEDTN
LQELDFEDFLSDKDTNQTDPLKDVLLDLEGEPSEEQNKDDDKIEDDIILE
DKDDYEDPLEEEYEHLYEK
>AYWB_206 conserved hypothetical protein
MLREKLFKDFLKSKKNLEMRNQLIDLHLPLVKKLVSKFKYYPCVLQKQDL
YQEGFLGLIKALNNYQDLGYDFIAYAEPTIKSEIRELIRKSHSPSVPQKT
HKTNNPSFQEENTHMALSNP
>AYWB_354 conserved hypothetical protein
MLRQKLFKDFFKNKKNLEIRNQLIELHLPLLKKLAYHFKYYPKVLTKEDL
YQEGILGLIKALNNYQDLGYDFIAYATPTIKKATHLQFPKKQTNYRPKTK
LYL
>AYWB_224 conserved hypothetical protein
MFKIKNNLLLLLNVFVFAFLGLFLINNNQQVMGMDKDIASTSNNNPNITN
YSIEENIINLKYKIRENAVKKINIENEIQQLSNNEPRKNTLLTLKKNLEN
LINNQKEQLKTYQILLKTLNDENN
>AYWB_070 cspC, cold shock protein
MQDKKEQGTCRWFSKDKGYGFIISADGKDIFVHYSSIQTEVFGRKTLNEN
DKVEFTVKEGDRGAQAVDVVVVNE
>AYWB_420 greA, transcription elongation factor GreA
MNNKIYELTQTGIEKLKKELTFLKEVKRKENLEALKEAREQGDLSENADY
DAARNEQALIEHRISEIQNILKNVRVVKVSKEREVSIGKKVSLELLHTKQ
QQEIELVSTLEADPFTNKISIESPLGQNIKGHQIGDIVFVTSETGNTFRV
KIVDVQ
>AYWB_059 hrcA, heat-inducible transcription repressor
MMNMLSDRKKLILKAVVENYSQKRQPVGSKMLTYLPYLKFASATIRYDMV
QLEKEGFLQKNHTSSGRVPSFKGYVYYLNHLLTRDHDVACMFESIDKVIQ
KKRFCKGQVIKEALNLLNNLTNYTTMAIGSDIFNNSKITKIDFIPLNSAQ
AVILIITDKGNVQHQNISLEQTKEISIYDLKDVVQVVNDLLKDKFLSEAA
HIIQSDFFKKTIAKYICFQEQLIALFMEAFSSFASENLYFSGVSKMLEKP
ELNNPEIIKKFMGLLERKELLKIMLNQDSLSFKFSDGLQLTPLKDCMILS
IPFDVNPNEKGRIAVVGPSWMKYPKVIPILEYLAVHLSKLNDQE
>AYWB_572 nusA, N utilization substance protein A
MISKNFFKLLDKIAQESGLDKDQVIDAFAKGLISGCKKNHKVKSCKIHLK
EDKSEIILYKQFLVADEATISTINLKESTPITLEEAQQIKPHAKIGQVID
IKVDPKDFNLYAVKEFKNQFNEELTKKKRENIYNFFKQQEGKLISAKIIS
ENDKFYNLELEKEITTLLPKKEIASNNEMQVGERIQVFLSEVKKTTKWPK
IFVSCNHVGLVVKVLEENIPEIQEGIVKIAGVARISGERTKIGLFSCDAQ
IDAIGSCIGERSNRIKNVIKILKGEKIDLFIWSDDPQELIANALKPASCL
QVVIKDDINKCALAIVPDDQFSLAIGKLGKNVKLAVEVTKWNIDIKTLDQ
AQIEGLI
>AYWB_327 nusB, N utilization substance protein B
MKRPPNKKESRLLRIELMKLLYQYDFYQNNLTLSQTNTNPIFTFFQKIIT
KLKFIDEIITKSLYDYKINRLNKVDRAIIRLATYELLETNISHAIIIDEA
IEITKQFCNLNDEKQHKFNNKLLDQIYRQLQMYKKLIT
>AYWB_466 nusG, transcription antitermination protein nusG
MNKAEKQIKETQAQEKEFQNTCHLKWYIAQTYSGYENVVKDDLLRRVESI
GIGDLVSNVLSPKEEYYETRLDGKKVKKERKMYPGYVFIQMMITDRSWFV
VRNTPRITGFLGSSGMGSKPVPLSENEINPVLLKMGIINKPDYKKFIGKK
VEIISGSFVGQIGQVSSIDADREKMILEVDLFGRATPVEISFNDFKEIF
>AYWB_143 rnc, dsRNA-specific ribonuclease
MKNIQILFQTLNIFPKNLVLYKQALTHSSYSNEQTPPQEDNERLEFLGDA
IVGLLMADYLYSQSKEDEGIMTKKRAQAVCEKSLTIYAQKIELQNYLLLG
KGEKNKDFNAKGIMADTFEALFGAIYLDLGYLTAKKVFHNIVLPHLAKTI
YIIDFKTQLQEIVQSEKKTIQYKIVQEQGPAHSKNFVAEVYLEKNLLGTG
EGSTKKSAEQKAAQQALSKVAKTKDLIKNKGVKEKEL
>AYWB_495 rpoA, DNA-directed RNA polymerase alpha chain
MKNLKFIKPFFVEEIDENPISGKFTIKPLERGYGITVGNALRRVLLSSLP
GAAIVNVKIQGVEQEFTTIPGVYEDVMTIILNLKKIVFAVDDESDDFEEK
LELIAKGPQRLTAASFELPAGVKIINPDHYITTLSDDVCFHMTVTIKKGI
GYVGAKENKVHIENQVGVIAIDSLFTPVVNVSYQVEKKLGNKDELTIEIT
TNGALLAKEALATAASILVDHFNVLVELSQKPAHVEFVSESKKEAHNYVL
DLEIEQLDLSVRLFNSLKRAGIDTVASLVKLSEKEVVKLKSLGRKSFQEL
KDKFLEYGLEFNDYLKEALHHSVEEDKDKH
>AYWB_461 rpoB, DNA-directed RNA polymerase beta chain
MGYHNVKYGKKAQRRNYSKTIYDVDLPNLIEIQNQSFDWFLKHGIKELLQ
DFCPIESYNGDLKIHFDDYFLTPPKYSIEETKIKDISYVAQLFVKTTLEN
VLTGETKQSNILLTELPLMTSTGTFIINGTERVVVSQIVRSASVYFAGNF
DIKLNRTIYSGQVIPSRGAWIEYEEGSKEILYAKLDRSKKIPLSNFIYAL
GFDSKEAIENVFGKSAILDSVFDKETDMDSDNALVELYSKIRQGEKVPVD
TARDFIRTRLFDQKKYDLAKVGRYKFNKKLDVLTRAENTYLACDFVNPEN
QEIMIAQDELLTKEKIAILKQNRHFLLQEIFDAKHNLENETDEEILAYKK
YPQKNELFTKTNIINSRTGEVLVAKDTLVNDDIINHLRHNIHTLDEKVSK
FFLGTKDIYQKEADRQGVFNEILEVYTSKDESGKLYNKVKLIGNDQRETK
KHITLSDVIASINYYLNLYENVGTVDDIDHLGNRRLRLIGELLKNQFRIG
LTRAEKNIKDMISTSKFGEVNGPGDLVNFTFLMSVIKTFFTNSRLSQFMD
QINPLAELTQKRRVSALGIGGINRDRAGIEVRDVHNSHYGRLCPIETPEG
PSIGLITSLSTYAKVNKYGFIQTPFFKVLQQDGKTTLSRDIDYLTADQEK
EEIIASAGFVLDANNSFQDKKIIARSNGETGIFERNQITYADVSPKQIVS
VATSSIPFLEHNDASRALMGANMQRQAVPLLIPESPIVGTGVEYRAAKDS
GCLIIARESGFVTYVDAQKIIITKKPNQTVSLNGKTLYDTTQEFTYTQAK
VLYENNHKEYQAEYTLINFAKSNQDTLVLQKPIVVLGEHINEGDILVSGP
STSQGELALGRNVTVAFMTWEGYNYEDAIIMSEELVKHDVYTSIHIDKYE
VQTRELKKGSGQEEITREVPNVGADAIKNLDERGIIIPGSEVKEGDILVG
KITPQGNIEPSPSEKLIQIVIGEKAREYKDSSLRVPFGEGGIVQSVHYFS
RKNGDVLPAGVNENIRVFIAKKRKINEGDKMAGRHGNKGVISRILPKEDL
PYMADGTPIDIMLNPLGVPSRMNIGQILEIHLGMAAKKLGIKVATPVFDG
VNDYDLKEIMKEANLEPDGKMVLYDGRTGEPYDSRISVGVMYMVKLSHMV
DDKLHARNVGPYTLVTQQPMGGKVQNGGQRFGEMEVWALYAYGAAHTLQE
ILTVKSDDIVGRNKTYSAIVQGTQLPKPSIPESFRVFIKELQSLGLYVEL
IKTDTKENEVNKSLIDYKKEGYN
>AYWB_460 rpoC, DNA-directed RNA polymerase beta' chain
MSDNRLFTSVETLNLSSPVLEKLKLSGINTLEDFNTFTLEELRLLLQEAF
LEVLPILKNFALPRNLQNLDLSEAVINILTELGMEDFQDLLQTKMAVLTK
SFETNPLAFQKLNDLFKLYNHFPSISSDKEYGSRDYDYFKIRLAAPEEIR
QWSYGEVTSYETINYRTYKPEISGLFCQKIFGPVVDFQCACSKKQVSIKS
QFCNKCGVEFTETKVRRERMGHIELQTPIVHTWYLNSSPSRLAILLNIKT
KQLEEIVYYVSYVVIDPGKTEFKPKEIITETQYSEALYEFGNTFVALTGA
EAVKKLLENLNLEKTIKVLRKSLSENSKQKRESIIKRLEIIESFHQSDNK
PEWMVMDVIPVLPPGLRPMVPLDGGRFATTEVNDLYRRILNRNNRLKKQM
LQKAPRLIIKNEKRMLQEAVDALFDNTKTSKKNVNNVEKNRPLKSLSEML
RGKQGRFRQNLLGKRVDYSGRSVIIVGPDLEMHQCGVPREMAIILFKPFI
LKKLQETKGIDKKNANTIYEKMNEEVWNALEEVVKEHPVLLNRAPTLHRL
GIQAFDPKLIDGKAIRLHPLVTPAFNADFDGDQMAIYVPLSLEAQAEARL
LMLVSNNILDPKNGNPVVTPSQDMVLGNYYLTIEEKKDRTINSYDSAQRT
AEHQFKHRNEGTFFADINEAKTAYQNKEIHLHTRIFIKPQTINLSFTEEQ
RQKYLMTTLGKLIFNDILPPSFPYINEPTQFNLDVKTPDAYFLPPGTNPK
QFLKKLPTPKPFNKKFLSMIIACFFKQMKITETSKMLDHIKNLGFKYSTI
AGITVSFADINTYSNKQELLQEVETRNIQIETWHKDGFLTDAERRRLVIN
EWKTIRDEIQEGLMKEFKQDNHIFMMSESGARGSVSNFTQLAGMRGLMNN
PKGEIIEVPVKASFREGLKVSEFFISTHGARKGSTDTALKTAESGYLTRR
LVDVTQDIVVIKEDCNSDRGFIVEAMMSDGKEIVSLKKRIMGRFASCDIC
HPKTNTLIVARNELIIESKAQEIITAKIKKVPIRSILTCNCEYGICAKDY
GVNLATNKLVEIGEAVGVIAAQSIGEPGTQLTMRTFHTGGVASASDITQG
LPRIEELFEVRKPKGKALISELKGKIKKIDKIRSQNPEIVITEENDPDTE
HRYILEPNVDILVSKNNIVYPGQKLTSGSVDLKELLRVAGTTEVQKYILE
EVQKVYRAQNVYISDKHIEIIIHQMFKQILIIDEGDTHLLPGTEITINKF
KKANLKMLEEKKRLAVGRPIILGITRSSLRSDSLLSAASFQETTKILIDA
AIKGKTDHLYGLKENVIIGGLIPAGTGILETTLFKYPKEPATTSELTKKT
NQN
>AYWB_380 rpoD, RNA polymerase sigma factor
MLREKIFKDFLKNKKNLEIRNQLIDLHLPLVKKLVSKFKYYPCVLQKQDL
YQEGVLGLIKALDNYVDLGYDFIAYATPTIKSDIRESIRKSHSPSVPQKI
HKTNNPSFQEEKHTWHYQILNPNQLWLKQIHHELFLKKLKNQIK
>AYWB_233 rpoD, RNA polymerase sigma factor
MLREKLFKDFLKSKKNLEIRNQLINLHEPLVKKLVSKFKYYPRVLQKQDL
YQEGVLGLIKALNNYVDLGYDFIAYATPTIKSEIRELIRKSHSPSIPQKT
HKTNSTSFQEEKHSLEKGNRNPNTHQIWLKQVNHELLLKKLKTKLSKKEF
NIIRLSFGIPLGNINEDYQPSYSNQEIAQKLNLTLRQVETLKNIAINKLK
K
>AYWB_107 rpoD, RNA polymerase sigma factor RpoD
MELDNIIKTLNEQAGRKKKLTSQLIISFLQNQNIKIPYQQIAQNLNEQGI
QIISCETQAATSLNKNHNKNDTNNQTNTPNDVFTDFDSGSTNANLEKTDE
NKDEDNTQDSEEDIQDFDISEEDLISDEKITELEEDEDEKISKEEISKIH
SDIKMDDSVRMYLKEIGQIPLLSLAEEQKKSILVFLGKQAKQKLAKHKTK
EIELSEDQLQEAHDQIKQARRAKDILVESNYRLVVSIAKRYIGRGILFLD
LIQEGNMGLMRAVDKFDYQKGFKFSTYATWWIRQAITRAIADQARTIRIP
VHIVETINKMALCTRKLTQKLKKKPTVEELADKMNISAEKIRSIQYIEKK
PISLEAPARENEEDETSLGDFISDPNILSPHEYMMKEVTQKLLDEVLENT
LTEREEKVLKMRYGLLDGKTHTLEEVGTLFGVTRERIRQIESKALRRLRT
PAKQSKLKSLYHNHK
>AYWB_359 rpoD, RNA polymerase sigma factor
MLRQKLFKDFLKNKKNLEIRNQLIELHLPLVKKITYHFKYCPKVLTKEDL
YQEGILGLIKALNNYQDLGYDFIAYATPTIKSAINELIRKSHSPSIPQKT
TKPNNISFKEEQYKQPNWDKILNPHQLWLKQVKHELLIKKLKTKLSKNEF
NVICLNFGISLENNNKPNQQPLSNHAIAQKLNLKLSQIEDLKDNAIRKLN
PNYKNKEK
>AYWB_194 rpoD, RNA polymerase sigma factor
MLRQKLFKDFLKNKKNLEIRNQLIELHLPLVKKLAYHFKYYPKVLTKEDL
YQEGILGLIKALNNYQDLGYDFVTYATPKIKFAINELIRKSHSPSIPQKT
TKPNNISFKEEQYKQPNWDKILNPHQLWLKQVKHELLIKKLKTKLSKNEF
NVICLNFGISLENNNKPNQQPLSNHAIAQKLNLTLKQIENLKKDAIKKLN
PNYKNKEK
>AYWB_654 rpoZ, DNA-directed RNA polymerase omega chain
MFMQNNSKPNKKKYNKEGLIYPSIDKLLDKINSKYKLVHIASKTAHVIEA
QKKELPELLCNKVVGKALEEIINDKVKFAFK
>AYWB_596 spoT, GTP pyrophosphokinase
MILNSDLTLEKDTLYQDLMVVIFKNIQDATILQKITKAYLFAKEKHHGQK
RFTGEPYIIHPCAVTKILAQLNSEPNTLMAGLLHDVLEDANATMEDLTSL
FGEDVAYLVYQATKLTKIAFHKNQGHADNQQKMFLAMAKDIRVVIVKIAD
RLHNMQTLNVMTSEKQLRIAKETLEIHAPLTHRLGLFEIKSQLEDLSLRY
VFPQEYYRVSNLIRLKKQQREESIAKIITNIKSLLDSHQLKNYTIKGRVK
NIYSIYKKIVKRKVSFEEIFDLLAIRIIVPTVDLCYQCLGIIHGHFSPLP
LRFKDYIAVPKPNLYQSLHTTVLTKDGSLFEMQIRTQEMDEIAEKGIAAH
WAYKENKTYSQEAKQLELAKKLRWYRELVKITIDAKNHPEETPKEFVDAI
KNDILSDNVYVFTPTQEVFELPKGSTPIDFAFRIHSAVGSKMTAAIINGQ
IAPIDYQLKNGDIISIKTNKNILSVNKDWLRMVKTTHAKRKIKGFLKKDI
KENKTEYLAEIQKGKDIIEKELTANKIEISLLDNNFVQKHFERYNIQTLN
DFYYEIAKKQLNPKSLINKLLVLAKETLSQNILQKQMAKSHVKLKHQSET
GVIIEGLSNPKLKLASCCTPVYNDEILGFVTKGRGIIVHRKECNNLAQCD
EKRLITASWQKDYTIAKYPAWISIIASTKDILVQQIINKINSFNLSILEF
NVINKQKLETIIKIRILIANTKELNNLITNLYKISQIYKIQRINN
>AYWB_318 srmB, superfamily II DNA and RNA helicase
MQNYIQKKILQLQFQTLTPIQKEVFSQFEKPGNLVGIAPTGTGKTHAYLL
PILSKIDFQKTFTQAIILVPTNDLVFQVWEMFKQIEKTNFTKILYRGMDK
QKAITTFEKKQPPLIIATPDKLLEYAFKLKKINLKYVSYLVLDEADMMFD
ELFLNSLDPLISHLKAKILLFSATFNEQLKPFINRYFGKSTFIDVYNQSN
LNRTFYLLETTTSKIQTLIHLTKVLNPYLALIFVNEKKEQELVFQTLQND
SLKLLNYNSDLSVKQRKKSLKAIHKLKYQYVIASDLAARGIDFDASCVIH
YNLPSHLEFFFHRSGRTSRMGKKGEIIVLYDPQEIKEKEKINKLIQLGIT
FHKSSLSKGGFIRNQNSKIVTTTKAYKPNKKNKNITNNQTNQKKNFKQNK
FTKDSNLEAPNETQKKAQEKNNNNKKNKSKQVKPNYKKRIKKKTKPQKQK
HFFSNKI
>AYWB_054 srmB, superfamily II DNA and RNA helicase
MNTLFEQLPILEQTKKALKELNFIDTTPIQALVIPEIIKGHDVIGQAQTG
TGKTFAFGIPIIEKINPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQE
IRIAVVYGGESYTKQFRSLEAKPHLIIATPGRAIDHLERGKIDLSALKIL
TLDEADEMLKMGFQEALETILKKIPEERQTVLFSATLPPFIKKIASKYQK
DTKILQVPVKNIAVNAIEQNYFLVKEVDKAKLLVRLLDLKKDYSTILFAN
TKKDVDEITAYLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATD
VAARGLDISDIKMVINYDLPHEDEVYVHRIGRTGRAGKKGLAYSLISPRK
VSQLKKLEYYLKEKITLLDIPSVQSIKLQNAKDLEKKILNIIEKNKEETT
PNPLAQKLLENFSSEQIIQGLLKNFLPKERNYTEIIPPRINTNNSFTRSR
FGFESRFGSYGSNDSYKRKNSNFIEVVINLGKKDNINPPVLLKLLKDHFK
IYGKNIGNIKHLTHETIFEVESRFWNQMKSKSNIRFQNKNLILNKKD