Gene list
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COG category: Transcription
Organism: Shigella sonnei Ss046, Ss046
Number of genes found: 269
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| Shigella sonnei Ss046, Ss046 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | SSO_P053 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pSS_046 | CDS | 49336 | 468 | + | 0.352564 |
| NA | SSO_1720 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1822612 | 1065 | + | 0.483568 |
| NA | SSO_1433 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1508189 | 291 | - | 0.436426 |
| NA | SSO_2861 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3003765 | 420 | - | 0.464286 |
| NA | SSO_4438 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4706796 | 294 | - | 0.517007 |
| NA | SSO_2455 | sucrose operon repressor | SubName: Full=Sucrose operon repressor; | chromosome | CDS | 2590908 | 954 | - | 0.516771 |
| NA | SSO_3739 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3922148 | 297 | - | 0.488215 |
| NA | SSO_1856 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 1955190 | 750 | + | 0.496 |
| NA | SSO_0802 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 851876 | 1104 | + | 0.574275 |
| NA | SSO_2811 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2956876 | 300 | + | 0.526667 |
| NA | SSO_2309 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 2437264 | 783 | - | 0.508301 |
| NA | SSO_0409 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 434588 | 543 | - | 0.432781 |
| NA | SSO_1624 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 1705837 | 762 | + | 0.393701 |
| NA | SSO_3645 | putative FADA-type transcriptional regulator | SubName: Full=Putative FADA-type transcriptional regulator; | chromosome | CDS | 3815715 | 297 | - | 0.555556 |
| NA | SSO_1215 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1289567 | 339 | - | 0.477876 |
| NA | SSO_1698 | multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system | SubName: Full=Multi modular putative transcriptional regulator also putative ATP-binding component of a transport system; | chromosome | CDS | 1802365 | 1407 | - | 0.513149 |
| NA | SSO_0871 | hypothetical bacteriophage protein | SubName: Full=Hypothetical bacteriophage protein; | chromosome | CDS | 926496 | 300 | + | 0.416667 |
| NA | SSO_0796 | putative toxin | SubName: Full=Putative toxin; | chromosome | CDS | 843347 | 468 | + | 0.540598 |
| NA | SSO_1262 | putative bacteriophage protein | SubName: Full=Putative bacteriophage protein; | chromosome | CDS | 1338560 | 258 | - | 0.5 |
| NA | SSO_2474 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 2615065 | 858 | + | 0.532634 |
| NA | SSO_2473 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2614318 | 735 | + | 0.47483 |
| NA | SSO_2613 | conserved hypothetical protein | RecName: Full=HTH-type transcriptional regulator IscR; | chromosome | CDS | 2764989 | 489 | - | 0.531697 |
| NA | SSO_1508 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1585292 | 600 | - | 0.518333 |
| NA | SSO_1334 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 1409239 | 792 | + | 0.496212 |
| NA | SSO_4515 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | chromosome | CDS | 4790045 | 348 | + | 0.448276 |
| NA | SSO_0963 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1039229 | 630 | + | 0.480952 |
| acrR | SSO_0451 | acrAB operon repressor | SubName: Full=AcrAB operon repressor; | chromosome | CDS | 477955 | 648 | + | 0.453704 |
| adiY | SSO_4291 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 4555480 | 762 | - | 0.413386 |
| araC | SSO_0070 | transcriptional regulator for ara operon | SubName: Full=Transcriptional regulator for ara operon; | chromosome | CDS | 78215 | 879 | + | 0.527873 |
| arcA | SSO_4551 | negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) | SubName: Full=Negative response regulator of genes in aerobic pathways, (Sensors, ArcB and CpxA); | chromosome | CDS | 4823203 | 717 | - | 0.51046 |
| argR | SSO_3379 | repressor of arg regulon; cer-mediated site specific recombination | RecName: Full=Arginine repressor; | chromosome | CDS | 3557834 | 471 | + | 0.488323 |
| arsR | SSO_3736 | transcriptional repressor of chromosomal ars operon | SubName: Full=Transcriptional repressor of chromosomal ars operon; | chromosome | CDS | 3919880 | 354 | + | 0.502825 |
| ascG | SSO_2858 | ascBF operon repressor | SubName: Full=AscBF operon repressor; | chromosome | CDS | 2999491 | 1014 | - | 0.5286 |
| asnC | SSO_3876 | regulator for asnA, asnC and gidA | SubName: Full=Regulator for asnA, asnC and gidA; | chromosome | CDS | 4085388 | 459 | + | 0.488017 |
| baeR | SSO_2131 | transcriptional response regulatory protein | SubName: Full=Transcriptional response regulatory protein; | chromosome | CDS | 2236307 | 723 | + | 0.539419 |
| basR | SSO_4288 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4551594 | 669 | - | 0.530643 |
| bglG | SSO_3911 | positive regulation of bgl operon | SubName: Full=Positive regulation of bgl operon; | chromosome | CDS | 4128488 | 837 | + | 0.426523 |
| bglJ | SSO_4513 | 2-component transcriptional regulator | SubName: Full=2-component transcriptional regulator; | chromosome | CDS | 4788512 | 678 | + | 0.454277 |
| cbl | SSO_2042 | transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM | SubName: Full=Transcriptional regulator cys regulon accessory regulatory circuit affecting cysM; | chromosome | CDS | 2142001 | 951 | + | 0.48265 |
| celD | SSO_1423 | negative transcriptional regulator of cel operon | SubName: Full=Negative transcriptional regulator of cel operon; | chromosome | CDS | 1496422 | 843 | + | 0.41637 |
| citB | SSO_0573 | sequence similarity to Shigella regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 613642 | 681 | + | 0.503671 |
| cobB | SSO_1140 | putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1220830 | 822 | + | 0.513382 |
| cpxR | SSO_4082 | transcriptional regulator in 2-component system | SubName: Full=Transcriptional regulator in 2-component system; | chromosome | CDS | 4319014 | 699 | - | 0.513591 |
| creB | SSO_4548 | catabolic regulation response regulator | SubName: Full=Catabolic regulation response regulator; | chromosome | CDS | 4819620 | 690 | + | 0.552174 |
| csiE | SSO_2617 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2768606 | 1302 | + | 0.513825 |
| cspA | SSO_3832 | cold shock protein 7.4, transcriptional activator of hns | SubName: Full=Cold shock protein 7.4, transcriptional activator of hns; | chromosome | CDS | 4025741 | 213 | - | 0.483568 |
| cspC | SSO_1337 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1411903 | 210 | + | 0.471429 |
| cspD | SSO_0867 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 921864 | 225 | - | 0.48 |
| cspE | SSO_0577 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 617136 | 210 | + | 0.438095 |
| cspG | SSO_0997 | cold shock protein-like protein | SubName: Full=Cold shock protein-like protein; | chromosome | CDS | 1071109 | 213 | + | 0.441315 |
| cspH | SSO_0995 | cold shock-like protein | SubName: Full=Cold shock-like protein; | chromosome | CDS | 1069834 | 213 | - | 0.469484 |
| cysB | SSO_1868 | positive transcriptional regulator for cysteine regulon | SubName: Full=Positive transcriptional regulator for cysteine regulon; | chromosome | CDS | 1965483 | 975 | - | 0.486154 |
| cytR | SSO_4103 | regulator for deo operon, udp, cdd, tsx, nupC, and nupG | SubName: Full=Regulator for deo operon, udp, cdd, tsx, nupC, and nupG; | chromosome | CDS | 4337471 | 1026 | - | 0.520468 |
| dbpA | SSO_1788 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 1884246 | 1374 | - | 0.515284 |
| deaD | SSO_3308 | inducible ATP-independent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3482909 | 1941 | - | 0.552808 |
| deoR | SSO_0825 | transcriptional repressor for deo operon, tsx, nupG | SubName: Full=Transcriptional repressor for deo operon, tsx, nupG; | chromosome | CDS | 878781 | 759 | - | 0.504611 |
| dinG | SSO_0778 | probably ATP-dependent helicase | SubName: Full=Probably ATP-dependent helicase; | chromosome | CDS | 821940 | 2151 | + | 0.542538 |
| ebgR | SSO_3213 | regulator of ebg operon | SubName: Full=Regulator of ebg operon; | chromosome | CDS | 3377089 | 984 | + | 0.514228 |
| emrR | SSO_2828 | regulator of plasmid mcrB operon | SubName: Full=Regulator of plasmid mcrB operon; | chromosome | CDS | 2971994 | 531 | + | 0.491525 |
| envR | SSO_3405 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3585590 | 663 | - | 0.440422 |
| envY | SSO_0512 | envelope protein | SubName: Full=Envelope protein; | chromosome | CDS | 539802 | 762 | - | 0.46063 |
| evgA | SSO_2460 | putative positive transcription regulator (sensor EvgS) | SubName: Full=Putative positive transcription regulator (Sensor EvgS); | chromosome | CDS | 2596923 | 615 | + | 0.403252 |
| exuR | SSO_3253 | negative regulator of exu regulon, exuT, uxaAC, and uxuB | SubName: Full=Negative regulator of exu regulon, exuT, uxaAC, and uxuB; | chromosome | CDS | 3431359 | 777 | + | 0.498069 |
| fadR | SSO_1179 | negative regulator for fad regulon, and positive activator of fabA | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 1258213 | 720 | + | 0.515278 |
| farR | SSO_0681 | transcriptional regulator of succinylCoA synthetase operon | SubName: Full=Transcriptional regulator of succinylCoA synthetase operon; | chromosome | CDS | 725661 | 723 | - | 0.479945 |
| fecI | SSO_4465 | probable RNA polymerase sigma factor | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 4737828 | 522 | - | 0.544061 |
| fis | SSO_3402 | site-specific DNA inversion stimulation factor | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 3584058 | 297 | + | 0.47138 |
| flgM | SSO_1091 | flagellar protein | SubName: Full=Flagellar protein; | chromosome | CDS | 1171140 | 294 | - | 0.520408 |
| fliA | SSO_1194 | alternative sigma factor 28 | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 1273629 | 720 | + | 0.544444 |
| fruR | SSO_0087 | transcriptional repressor of fru operon and others | SubName: Full=Transcriptional repressor of fru operon and others; | chromosome | CDS | 96588 | 1005 | + | 0.547264 |
| fucR | SSO_2962 | positive regulator of the fuc operon | SubName: Full=Positive regulator of the fuc operon; | chromosome | CDS | 3109144 | 732 | + | 0.48224 |
| galR | SSO_2997 | repressor of galETK operon | SubName: Full=Repressor of galETK operon; | chromosome | CDS | 3148922 | 1032 | + | 0.526163 |
| galS | SSO_2207 | mgl repressor | SubName: Full=Mgl repressor; | chromosome | CDS | 2313446 | 924 | - | 0.515152 |
| gatR | SSO_2137 | Galactitol utilization operon repressor | SubName: Full=Galactitol utilization operon repressor; | chromosome | CDS | 2241871 | 780 | - | 0.465385 |
| gcvA | SSO_2965 | positive regulator of gcv operon | SubName: Full=Positive regulator of gcv operon; | chromosome | CDS | 3111426 | 918 | - | 0.494553 |
| glpR | SSO_3660 | repressor of the glp operon | SubName: Full=Repressor of the glp operon; | chromosome | CDS | 3831775 | 759 | - | 0.538867 |
| gntR | SSO_3680 | regulator of gluconate (gnt) operon | SubName: Full=Regulator of gluconate (Gnt) operon; | chromosome | CDS | 3858349 | 939 | - | 0.556975 |
| greA | SSO_3329 | transcription elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3507312 | 462 | - | 0.484848 |
| greB | SSO_3537 | Transcription elongation factor | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 3699506 | 477 | + | 0.492662 |
| gutM | SSO_2850 | glucitol operon activator | SubName: Full=Glucitol operon activator; | chromosome | CDS | 2989859 | 360 | + | 0.544444 |
| hepA | SSO_0065 | probable ATP-dependent RNA helicase | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 68303 | 2907 | - | 0.550052 |
| hipB | SSO_1613 | persistence to inhibition of murein or DNA biosynthesis | SubName: Full=Persistence to inhibition of murein or DNA biosynthesis; | chromosome | CDS | 1696565 | 267 | + | 0.460674 |
| hpcR | SSO_4500 | homoprotocatechuate degradative operon repressor | SubName: Full=Homoprotocatechuate degradative operon repressor; | chromosome | CDS | 4773936 | 447 | + | 0.505593 |
| hyfR | SSO_2572 | putative 2-component regulator, interaction with sigma 54 | SubName: Full=Putative 2-component regulator, interaction with sigma 54; | chromosome | CDS | 2714015 | 1992 | + | 0.52761 |
| hypB | SSO_2874 | guanine-nucleotide binding protein | SubName: Full=Guanine-nucleotide binding protein; | chromosome | CDS | 3013868 | 873 | + | 0.555556 |
| iciA | SSO_3067 | replication initiation inhibitor, binds to 13-mers at oriC | RecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; | chromosome | CDS | 3229949 | 894 | + | 0.543624 |
| iclR | SSO_4189 | repressor of aceBA operon | SubName: Full=Repressor of aceBA operon; | chromosome | CDS | 4438274 | 864 | - | 0.53125 |
| idnR | SSO_4449 | L-idonate transcriptional regulator | SubName: Full=L-idonate transcriptional regulator; | chromosome | CDS | 4720625 | 975 | - | 0.472821 |
| ilvY | SSO_3944 | positive regulator for ilvC | SubName: Full=Positive regulator for ilvC; | chromosome | CDS | 4166282 | 894 | - | 0.576063 |
| kdpE | SSO_0645 | regulator of kdp operon | SubName: Full=Regulator of kdp operon; | chromosome | CDS | 682397 | 678 | - | 0.570796 |
| lacI | SSO_0298 | transcriptional repressor of the lac operon | SubName: Full=Transcriptional repressor of the lac operon; | chromosome | CDS | 326836 | 1083 | + | 0.56325 |
| leuO | SSO_0083 | probable transcriptional activator for leuABCD operon | SubName: Full=Probable transcriptional activator for leuABCD operon; | chromosome | CDS | 92751 | 1122 | + | 0.439394 |
| lexA | SSO_4223 | regulator for SOS(lexA) regulon | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 4481538 | 609 | + | 0.522168 |
| lldR | SSO_3801 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3985631 | 777 | - | 0.543115 |
| lrhA | SSO_2346 | NADH dehydrogenase transcriptional regulator, LysR family | SubName: Full=NADH dehydrogenase transcriptional regulator, LysR family; | chromosome | CDS | 2476701 | 939 | - | 0.495208 |
| lrp | SSO_0890 | regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | SubName: Full=Regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system; | chromosome | CDS | 946414 | 495 | + | 0.472727 |
| lysR | SSO_2999 | positive regulator for lys | SubName: Full=Positive regulator for lys; | chromosome | CDS | 3151344 | 936 | + | 0.532051 |
| malI | SSO_1538 | repressor of malX and Y genes | SubName: Full=Repressor of malX and Y genes; | chromosome | CDS | 1614165 | 1029 | + | 0.545189 |
| malT | SSO_3550 | positive regulator of mal regulon | RecName: Full=HTH-type transcriptional regulator MalT; AltName: Full=ATP-dependent transcriptional activator MalT; | chromosome | CDS | 3716471 | 2706 | + | 0.541759 |
| marA | SSO_1597 | transcriptional activator of defense systems | SubName: Full=Transcriptional activator of defense systems; | chromosome | CDS | 1678069 | 390 | - | 0.45641 |
| marR | SSO_1598 | multiple antibiotic resistance protein | SubName: Full=Multiple antibiotic resistance protein; | chromosome | CDS | 1678472 | 378 | - | 0.5 |
| melR | SSO_4293 | regulator of melibiose operon | SubName: Full=Regulator of melibiose operon; | chromosome | CDS | 4559032 | 909 | - | 0.50055 |
| metJ | SSO_4112 | repressor of all met genes but metF | RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; | chromosome | CDS | 4347719 | 318 | - | 0.518868 |
| metR | SSO_4002 | regulator for metE and metH | SubName: Full=Regulator for metE and metH; | chromosome | CDS | 4225953 | 954 | - | 0.56499 |
| mfd | SSO_1134 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1211828 | 3447 | - | 0.549463 |
| mlc | SSO_1570 | putative NAGC-like transcriptional regulator | SubName: Full=Putative NAGC-like transcriptional regulator; | chromosome | CDS | 1649579 | 1221 | + | 0.523342 |
| mtlR | SSO_3807 | repressor for mtl | SubName: Full=Repressor for mtl; | chromosome | CDS | 3995413 | 588 | - | 0.511905 |
| mxiE | SSO_P106 | MxiE | SubName: Full=MxiE; | pSS_046 | CDS | 96552 | 633 | + | 0.327014 |
| nac | SSO_2049 | nitrogen assimilation control protein | SubName: Full=Nitrogen assimilation control protein; | chromosome | CDS | 2149000 | 936 | - | 0.480769 |
| nagC | SSO_0630 | transcriptional repressor of nag (N-acetylglucosamine) operon | SubName: Full=Transcriptional repressor of nag (N-acetylglucosamine) operon; | chromosome | CDS | 663255 | 1221 | - | 0.530713 |
| narL | SSO_1956 | pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes | SubName: Full=Pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; | chromosome | CDS | 2058928 | 651 | + | 0.514593 |
| narP | SSO_2251 | nitrate/nitrite response regulator | SubName: Full=Nitrate/nitrite response regulator; | chromosome | CDS | 2365276 | 648 | + | 0.527778 |
| nhaR | SSO_0022 | transcriptional activator of nhaA | SubName: Full=Transcriptional activator of nhaA; | chromosome | CDS | 21798 | 906 | + | 0.475717 |
| nlp | SSO_3336 | regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu | SubName: Full=Regulatory factor of maltose metabolism similar to Ner repressor protein of phage Mu; | chromosome | CDS | 3513983 | 279 | + | 0.505376 |
| nrfB | SSO_4252 | formate-dependent nitrite reductase | SubName: Full=Formate-dependent nitrite reductase; | chromosome | CDS | 4515234 | 573 | + | 0.539267 |
| nusA | SSO_3315 | transcription pausing; L factor | SubName: Full=Transcription pausing L factor; | chromosome | CDS | 3492977 | 1488 | - | 0.528226 |
| nusB | SSO_0393 | transcription termination; L factor | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 420231 | 420 | + | 0.538095 |
| nusG | SSO_4155 | component in transcription antitermination | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 4396874 | 546 | + | 0.514652 |
| ompR | SSO_3536 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 3698559 | 720 | - | 0.547222 |
| oxyR | SSO_4134 | activator, hydrogen peroxide-inducible genes | SubName: Full=Activator, hydrogen peroxide-inducible genes; | chromosome | CDS | 4377885 | 918 | + | 0.555556 |
| parB | SSO_P032 | plasmid segregation protein | SubName: Full=Plasmid segregation protein; | pSS_046 | CDS | 27828 | 981 | + | 0.422018 |
| pdhR | SSO_0121 | transcriptional regulator for pyruvate dehydrogenase complex | SubName: Full=Transcriptional regulator for pyruvate dehydrogenase complex; | chromosome | CDS | 131320 | 765 | + | 0.556863 |
| pduD | SSO_2061 | putative propanediol utilization protein: diol dehydratase medium subunit | SubName: Full=Putative propanediol utilization protein: diol dehydratase medium subunit; | chromosome | CDS | 2159806 | 669 | + | 0.497758 |
| phnF | SSO_4278 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4540497 | 726 | - | 0.612948 |
| phnO | SSO_4269 | putative regulator, phn operon | SubName: Full=Putative regulator, phn operon; | chromosome | CDS | 4533904 | 435 | - | 0.583908 |
| phoB | SSO_0376 | positive response regulator for pho regulon | SubName: Full=Positive response regulator for pho regulon; | chromosome | CDS | 402236 | 690 | + | 0.54058 |
| phoP | SSO_1148 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 1229800 | 672 | - | 0.46875 |
| pocR | SSO_2056 | pdu/cob regulatory protein | SubName: Full=Pdu/cob regulatory protein; | chromosome | CDS | 2154849 | 648 | - | 0.453704 |
| pspA | SSO_1836 | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1930967 | 669 | - | 0.490284 |
| pspC | SSO_1834 | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1930330 | 360 | - | 0.502778 |
| pspF | SSO_1837 | psp operon transcriptional activator | SubName: Full=Psp operon transcriptional activator; | chromosome | CDS | 1931787 | 993 | + | 0.522659 |
| purR | SSO_1498 | transcriptional repressor for pur regulon, glyA, glnB, prsA, speA | RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; | chromosome | CDS | 1573108 | 1026 | - | 0.531189 |
| qseB | SSO_3164 | quorum sensing regulator B | SubName: Full=Quorum sensing regulator B; | chromosome | CDS | 3323924 | 660 | + | 0.513636 |
| rbsR | SSO_3923 | regulator for rbs operon | SubName: Full=Regulator for rbs operon; | chromosome | CDS | 4144668 | 993 | + | 0.505539 |
| rcsA | SSO_2009 | positive regulator for ctr capsule biosynthesis | SubName: Full=Positive regulator for ctr capsule biosynthesis; | chromosome | CDS | 2104910 | 624 | + | 0.375 |
| rcsB | SSO_2276 | positive response regulator for colanic capsule biosynthesis | SubName: Full=Positive response regulator for colanic capsule biosynthesis; | chromosome | CDS | 2391150 | 651 | + | 0.477727 |
| recG | SSO_3753 | DNA helicase | SubName: Full=DNA helicase; | chromosome | CDS | 3939810 | 2082 | - | 0.568204 |
| relA | SSO_2941 | (p)ppGpp synthetase I | SubName: Full=(P)ppGpp synthetase I; | chromosome | CDS | 3081144 | 2235 | - | 0.53557 |
| rfaH | SSO_4015 | transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin | RecName: Full=Transcription antitermination protein RfaH; | chromosome | CDS | 4241777 | 489 | - | 0.492843 |
| rhaS | SSO_4075 | positive regulator for rhaBAD operon | RecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; | chromosome | CDS | 4311778 | 837 | + | 0.519713 |
| rhlB | SSO_3951 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4175055 | 1266 | - | 0.520537 |
| rhlE | SSO_0776 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 819742 | 1365 | + | 0.5663 |
| rho | SSO_3954 | transcription termination factor Rho; polarity suppressor | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 4177107 | 1260 | + | 0.503175 |
| rnb | SSO_1854 | RNase II | RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; | chromosome | CDS | 1950621 | 1935 | + | 0.533333 |
| rnc | SSO_2691 | RNase III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 2848448 | 681 | - | 0.506608 |
| rnk | SSO_0562 | regulator of nucleoside diphosphate kinase | RecName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 602560 | 411 | - | 0.547445 |
| rob | SSO_4546 | right origin-binding protein | SubName: Full=Right origin-binding protein; | chromosome | CDS | 4818054 | 870 | - | 0.531034 |
| rpoA | SSO_3436 | RNA polymerase, alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 3612840 | 990 | - | 0.522222 |
| rpoB | SSO_4160 | RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 4400376 | 4029 | + | 0.52693 |
| rpoC | SSO_4161 | RNA polymerase, beta prime subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 4404481 | 4224 | + | 0.539062 |
| rpoD | SSO_3204 | RNA polymerase, sigma(70) factor | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 3367278 | 1842 | + | 0.530402 |
| rpoE | SSO_2697 | RNA polymerase, sigma-E factor | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2854503 | 576 | - | 0.489583 |
| rpoH | SSO_3699 | RNA polymerase, sigma(32) factor | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 3877195 | 855 | - | 0.54152 |
| rpoN | SSO_3350 | RNA polymerase, sigma(54 or 60) factor | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 3523791 | 1434 | + | 0.527894 |
| rpoS | SSO_2889 | RNA polymerase, sigma S (sigma38) factor | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 3030203 | 993 | - | 0.51863 |
| rpoZ | SSO_3756 | RNA polymerase, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 3944720 | 276 | - | 0.532609 |
| rstA | SSO_1552 | response transcriptional regulatory protein (RstB sensor) | SubName: Full=Response transcriptional regulatory protein (RstB sensor); | chromosome | CDS | 1631795 | 729 | - | 0.491084 |
| sdiA | SSO_1202 | transcriptional regulator of ftsQAZ gene cluster | SubName: Full=Transcriptional regulator of ftsQAZ gene cluster; | chromosome | CDS | 1280518 | 723 | + | 0.461964 |
| slyA | SSO_1514 | transcriptional regulator for cryptic hemolysin | RecName: Full=Transcriptional regulator SlyA; | chromosome | CDS | 1591084 | 441 | + | 0.47619 |
| soxR | SSO_4247 | redox-sensing activator of soxS | SubName: Full=Redox-sensing activator of soxS; | chromosome | CDS | 4507913 | 399 | - | 0.516291 |
| soxS | SSO_4242 | regulation of superoxide response regulon | SubName: Full=Regulation of superoxide response regulon; | chromosome | CDS | 4501503 | 324 | - | 0.509259 |
| spoT | SSO_3755 | (p)ppGpp synthetase II | SubName: Full=(P)ppGpp synthetase II; | chromosome | CDS | 3942593 | 2109 | - | 0.536747 |
| srlR | SSO_2851 | regulator for gut (srl), glucitol operon | SubName: Full=Regulator for gut (Srl), glucitol operon; | chromosome | CDS | 2990285 | 774 | + | 0.479328 |
| srmB | SSO_2702 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2859229 | 1335 | + | 0.549064 |
| tdcA | SSO_3275 | transcriptional activator of tdc operon | SubName: Full=Transcriptional activator of tdc operon; | chromosome | CDS | 3450832 | 939 | - | 0.421725 |
| torR | SSO_1003 | response transcriptional regulator for torA | SubName: Full=Response transcriptional regulator for torA; | chromosome | CDS | 1076910 | 693 | - | 0.525253 |
| treR | SSO_4422 | repressor of treA,B,C | SubName: Full=Repressor of treA,B,C; | chromosome | CDS | 4692752 | 948 | - | 0.537975 |
| trpR | SSO_4543 | regulator for trp operon and aroH; trp aporepressor | RecName: Full=Trp operon repressor; | chromosome | CDS | 4816426 | 327 | + | 0.538226 |
| ttk | SSO_3765 | putative transcriptional regulator | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 3952015 | 639 | - | 0.527387 |
| tyrR | SSO_1815 | transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport | SubName: Full=Transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; | chromosome | CDS | 1910832 | 1542 | - | 0.520104 |
| uhpA | SSO_3623 | response regulator, positive activator of uhpT transcription (sensor, uhpB) | SubName: Full=Response regulator, positive activator of uhpT transcription (Sensor, uhpB); | chromosome | CDS | 3793153 | 591 | - | 0.58714 |
| uidR | SSO_1542 | repressor for uid operon | SubName: Full=Repressor for uid operon; | chromosome | CDS | 1617623 | 591 | + | 0.502538 |
| umuD | SSO_1174 | UmuD | SubName: Full=UmuD; | chromosome | CDS | 1252592 | 420 | + | 0.483333 |
| uvrY | SSO_1204 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 1281990 | 657 | + | 0.496195 |
| uxuR | SSO_4479 | regulator for uxu operon | SubName: Full=Regulator for uxu operon; | chromosome | CDS | 4752329 | 774 | + | 0.531008 |
| vacB | SSO_4364 | putative enzyme | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 4633461 | 2484 | + | 0.550725 |
| virB | SSO_P085 | VirB | SubName: Full=VirB; | pSS_046 | CDS | 79012 | 930 | - | 0.34086 |
| virF | SSO_P041 | VirF | SubName: Full=VirF; | pSS_046 | CDS | 37224 | 789 | - | 0.304182 |
| waaP | SSO_3777 | lipopolysaccharide core biosynthesis protein | SubName: Full=Lipopolysaccharide core biosynthesis protein; | chromosome | CDS | 3961927 | 798 | + | 0.474937 |
| yaeG | SSO_0175 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 197365 | 1176 | + | 0.526361 |
| yaeO | SSO_0202 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 230038 | 261 | - | 0.471264 |
| yafC | SSO_0222 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 246404 | 915 | - | 0.495082 |
| yafP | SSO_0275 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 303060 | 453 | + | 0.432671 |
| yaiV | SSO_0350 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 377266 | 669 | + | 0.403587 |
| yajF | SSO_0371 | possible NAGC-like transcriptional regulator | SubName: Full=Possible NAGC-like transcriptional regulator; | chromosome | CDS | 395205 | 1047 | + | 0.541547 |
| ybaD | SSO_0390 | conserved hypothetical protein | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 418096 | 450 | + | 0.508889 |
| ybaO | SSO_0435 | putative LRP-like transcriptional regulator | SubName: Full=Putative LRP-like transcriptional regulator; | chromosome | CDS | 460493 | 546 | + | 0.492674 |
| ybbI | SSO_0476 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 507243 | 408 | + | 0.585784 |
| ybcM | SSO_1992 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 2091452 | 798 | - | 0.378446 |
| ybdM | SSO_0553 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 594277 | 630 | - | 0.468254 |
| ybeF | SSO_0583 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 621707 | 801 | - | 0.474407 |
| ybhD | SSO_0742 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 784415 | 1017 | - | 0.448378 |
| ybiH | SSO_0775 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 818842 | 684 | - | 0.54386 |
| ycdC | SSO_1033 | putative tet operon regulator | SubName: Full=Putative tet operon regulator; | chromosome | CDS | 1111719 | 639 | + | 0.510172 |
| ycfQ | SSO_1131 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1209516 | 711 | - | 0.500703 |
| ycfX | SSO_1139 | putative NAGC-like transcriptional regulator | RecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; | chromosome | CDS | 1219903 | 912 | + | 0.526316 |
| ycgE | SSO_1157 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1238143 | 732 | - | 0.480874 |
| ycjC | SSO_1841 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1937122 | 558 | - | 0.510753 |
| ycjW | SSO_1819 | putative LACI-type transcriptional regulator | SubName: Full=Putative LACI-type transcriptional regulator; | chromosome | CDS | 1915907 | 999 | + | 0.454454 |
| ycjZ | SSO_1805 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1903086 | 900 | - | 0.468889 |
| ydaK | SSO_1792 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1889481 | 909 | - | 0.49505 |
| ydcN | SSO_1704 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1808311 | 537 | - | 0.489758 |
| ydfH | SSO_1588 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1669212 | 687 | - | 0.499272 |
| ydhB | SSO_1497 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1572179 | 933 | + | 0.538049 |
| yeaM | SSO_1371 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 1444759 | 822 | + | 0.498783 |
| yeaT | SSO_1362 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1438505 | 945 | + | 0.519577 |
| yebK | SSO_1295 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1370778 | 870 | - | 0.488506 |
| yedW | SSO_2027 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2120880 | 843 | - | 0.431791 |
| yeeY | SSO_2085 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 2179951 | 951 | - | 0.512093 |
| yegW | SSO_2149 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2253732 | 747 | - | 0.515395 |
| yehT | SSO_2171 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2275575 | 735 | - | 0.496599 |
| yehV | SSO_2183 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2287841 | 648 | + | 0.533951 |
| yeiE | SSO_2213 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 2321553 | 882 | - | 0.537415 |
| yejH | SSO_2240 | putative ATP-dependent helicase | SubName: Full=Putative ATP-dependent helicase; | chromosome | CDS | 2353360 | 1761 | + | 0.528677 |
| yfeD | SSO_2490 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2631399 | 393 | + | 0.463104 |
| yfeG | SSO_2526 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 2662886 | 1053 | - | 0.531814 |
| yfeR | SSO_2497 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 2634523 | 927 | - | 0.537217 |
| yfeT | SSO_2516 | conserved hypothetical protein | RecName: Full=HTH-type transcriptional regulator MurR; AltName: Full=MurPQ operon repressor; | chromosome | CDS | 2653690 | 858 | - | 0.513986 |
| yfhH | SSO_2644 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2802661 | 921 | + | 0.510315 |
| yfiE | SSO_2703 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 2860772 | 927 | - | 0.486516 |
| ygaA | SSO_2853 | putative 2-component transcriptional regulator | RecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; | chromosome | CDS | 2992013 | 1590 | - | 0.557862 |
| ygaE | SSO_2808 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2955321 | 681 | + | 0.53304 |
| ygbI | SSO_2883 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 3024110 | 798 | - | 0.515038 |
| ygcP | SSO_2921 | putative anti-terminator regulatory protein | SubName: Full=Putative anti-terminator regulatory protein; | chromosome | CDS | 3060034 | 576 | + | 0.467014 |
| ygeV | SSO_3020 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3173703 | 1779 | - | 0.456998 |
| ygjM | SSO_3123 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3280959 | 417 | + | 0.489209 |
| yhcI | SSO_3363 | putative NAGC-like transcriptional regulator | RecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; | chromosome | CDS | 3541212 | 909 | - | 0.576458 |
| yhcK | SSO_3367 | putative FADA-type transcriptional regulator | RecName: Full=Transcriptional regulator NanR; | chromosome | CDS | 3545436 | 792 | - | 0.525253 |
| yhcO | SSO_3381 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3558988 | 273 | - | 0.424908 |
| yhdM | SSO_3433 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3611505 | 426 | - | 0.5 |
| yhfR | SSO_3506 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3666763 | 798 | + | 0.503759 |
| yhgF | SSO_3538 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3700178 | 2223 | + | 0.569051 |
| yhhG | SSO_3719 | conserved hypothetical protein | RecName: Full=Nickel-responsive regulator; | chromosome | CDS | 3895857 | 402 | + | 0.564677 |
| yhhY | SSO_3683 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3861664 | 558 | + | 0.5 |
| yhiE | SSO_3574 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3746342 | 528 | - | 0.329545 |
| yhiW | SSO_3571 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3740617 | 729 | + | 0.41701 |
| yhiX | SSO_3570 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3739425 | 825 | + | 0.412121 |
| yhjB | SSO_3871 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 4079178 | 603 | + | 0.47927 |
| yhjC | SSO_3870 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 4077759 | 972 | - | 0.520576 |
| yiaC | SSO_3840 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4033160 | 441 | - | 0.521542 |
| yiaG | SSO_3833 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4026234 | 291 | - | 0.443299 |
| yidP | SSO_3635 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3805143 | 717 | + | 0.51325 |
| yidZ | SSO_3555 | putative transcriptional regulator LYSR-type | RecName: Full=HTH-type transcriptional regulator YidZ; | chromosome | CDS | 3723552 | 960 | + | 0.522917 |
| yieP | SSO_3925 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4147076 | 549 | - | 0.497268 |
| yifDA | SSO_3932 | Transcription regulator | RecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; | chromosome | CDS | 4153569 | 840 | - | 0.486905 |
| yihW | SSO_4045 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 4278563 | 789 | - | 0.499366 |
| yiiD | SSO_4057 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; EC=2.3.1.18; | chromosome | CDS | 4290596 | 990 | + | 0.546465 |
| yijC | SSO_4136 | conserved hypothetical protein | RecName: Full=HTH-type transcriptional repressor FabR; | chromosome | CDS | 4380452 | 705 | + | 0.524823 |
| yijO | SSO_4127 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 4367106 | 852 | - | 0.530516 |
| yjaB | SSO_4184 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4431465 | 444 | - | 0.531532 |
| yjaE | SSO_4168 | putative transcriptional regulator | RecName: Full=Regulator of sigma D; | chromosome | CDS | 4414544 | 477 | - | 0.494759 |
| yjdC | SSO_4318 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4588467 | 600 | - | 0.535 |
| yjdG | SSO_4301 | putative 2-component transcriptional regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4569741 | 720 | - | 0.491667 |
| yjeB | SSO_4363 | conserved hypothetical protein | RecName: Full=HTH-type transcriptional repressor NsrR; | chromosome | CDS | 4633039 | 426 | + | 0.488263 |
| yjfQ | SSO_4373 | putative DEOR-type transcriptional regulator | RecName: Full=HTH-type transcriptional regulator UlaR; | chromosome | CDS | 4642947 | 756 | - | 0.506614 |
| yjgJ | SSO_4431 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4700916 | 255 | + | 0.494118 |
| yjjM | SSO_4503 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4777771 | 807 | - | 0.472119 |
| ykgD | SSO_0319 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 348835 | 855 | - | 0.508772 |
| ylcA | SSO_0522 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 555202 | 684 | - | 0.552632 |
| yneJ | SSO_1602 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1682340 | 882 | - | 0.535147 |
| ynfL | SSO_1569 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1648551 | 894 | + | 0.519016 |
| yoaA | SSO_1353 | putative enzyme | SubName: Full=Putative enzyme; | chromosome | CDS | 1426875 | 1911 | + | 0.55259 |
| yqeH | SSO_3006 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3159793 | 693 | + | 0.37518 |
| yqgE | SSO_3102 | conserved hypothetical protein | RecName: Full=UPF0301 protein YqgE; | chromosome | CDS | 3264591 | 636 | + | 0.511006 |
| yqhC | SSO_3154 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3310588 | 1128 | - | 0.5 |
| yqjI | SSO_3209 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3372449 | 624 | + | 0.532051 |
| yrbA | SSO_3338 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3515623 | 270 | - | 0.503704 |
| ytfA | SSO_4390 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4654786 | 327 | + | 0.422018 |
| ytfH | SSO_4396 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4661041 | 471 | + | 0.52017 |
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