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2024-05-05 14:42:25

Gene list

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COG category: Transcription
Organism: Shewanella oneidensis MR-1, MR-1

Number of genes found: 288

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0026 transcriptional regulator, ArsR familychromosome CDS31147 309 - 0.414239
SO0045 Rrf2 family proteinchromosome CDS52004 456 + 0.425439
SO0072 transcriptional regulator, GntR familychromosome CDS84353 372 + 0.543011
SO0082 transcriptional regulator, MerR familychromosome CDS94160 357 + 0.473389
SO0159 hypothetical proteinchromosome CDS165737 357 + 0.431373
SO0183 acetyltransferase, GNAT familychromosome CDS187837 483 - 0.412008
SO0193 transcriptional regulator, TetR familychromosome CDS202414 612 + 0.439542
SO0198 transcriptional regulator, TetR familychromosome CDS208491 615 + 0.504065
SO0295 transcriptional regulator, LysR familychromosome CDS301109 885 - 0.466667
SO0317 transcriptional regulator, AraC/XylS familychromosome CDS323850 759 + 0.492754
SO0339 conserved hypothetical proteinchromosome CDS339829 273 - 0.483516
SO0346 transcriptional regulator. GntR familychromosome CDS352532 717 - 0.504881
SO0351 DNA-binding response regulator, LuxR familychromosome CDS358578 597 - 0.519263
SO0369 transcriptional regulator, LysR familychromosome CDS382765 888 - 0.47973
SO0386 DNA-binding protein, putativechromosome CDS400540 249 - 0.445783
SO0390 hypothetical proteinchromosome CDS403879 300 + 0.43
SO0402 transcriptional regulator, LysR familychromosome CDS415596 930 + 0.491398
SO0407 ATP-dependent RNA helicase, DEAD box familychromosome CDS423730 1320 + 0.456061
SO0443 transcriptional regulator, MerR familychromosome CDS471758 492 + 0.530488
SO0490 transcriptional regulatorchromosome CDS512737 1284 + 0.466511
SO0497 hypothetical proteinchromosome CDS521627 1962 + 0.476555
SO0502 transcriptional regulator, ArsR familychromosome CDS528995 336 - 0.431548
SO0523 transcriptional regulator, LysR familychromosome CDS546161 933 - 0.460879
SO0579 serine/threonine protein kinase, putativechromosome CDS605524 1809 - 0.466003
SO0622 DNA-binding response regulatorchromosome CDS649660 675 - 0.463704
SO0636 acetyltransferase, GNAT familychromosome CDS663421 495 - 0.458586
SO0641 prophage MuSo1, transcriptional regulator, Cro/CI familychromosome CDS669361 723 - 0.466113
SO0701 transcriptional regulator, LysR familychromosome CDS718091 990 + 0.484848
SO0705 transcriptional regulator, Cro/CI familychromosome CDS723011 294 + 0.442177
SO0721 conserved hypothetical proteinchromosome CDS737575 252 - 0.436508
SO0733 cold shock domain family proteinchromosome CDS748237 612 - 0.48366
SO0734 conserved hypothetical proteinchromosome CDS749154 357 + 0.507003
SO0766 transcriptional regulator, AraC/XylS familychromosome CDS779788 822 - 0.459854
SO0767 transcriptional regulator, LysR familychromosome CDS781403 417 - 0.529976
SO0790 hypothetical proteinchromosome CDS803915 117 + 0.393162
SO0791 transcriptional regulator, LysR familychromosome CDS804249 864 + 0.454861
SO0839 transcriptional regulator, LysR familychromosome CDS855541 912 - 0.475877
SO0843 transcriptional regulator, LysR familychromosome CDS865510 882 - 0.475057
SO0860 response regulatorchromosome CDS888057 1020 + 0.471569
SO0864 transcriptional regulator, LuxR familychromosome CDS892542 768 + 0.429688
SO0877 acetyltransferase, GNAT familychromosome CDS907093 510 + 0.482353
SO0896 hypothetical proteinchromosome CDS924554 216 - 0.430556
SO0916 transcriptional regulator, MarR familychromosome CDS944481 930 - 0.463441
SO0920 acetyltransferase, GNAT familychromosome CDS950736 444 - 0.463964
SO0936 transcriptional regulatorchromosome CDS968070 747 + 0.43909
SO0940 transcriptional regulator-related proteinchromosome CDS971225 744 + 0.456989
SO0954 acetyltransferase, GNAT familychromosome CDS990485 420 + 0.459524
SO0977 transcriptional regulator, MarR familychromosome CDS1007685 498 + 0.447791
SO0989 transcriptional regulator, LysR familychromosome CDS1021392 891 + 0.427609
SO0997 transcriptional regulator, LysR familychromosome CDS1028752 933 + 0.459807
SO1046 transcriptional regulator, LysR familychromosome CDS1084167 891 - 0.499439
SO1092 transcriptional regulator, AraC/XylS familychromosome CDS1130671 780 + 0.462821
SO1094 conserved hypothetical proteinchromosome CDS1133432 387 - 0.385013
SO1136 ATP-dependent RNA helicase, DEAD box familychromosome CDS1177348 1344 + 0.514137
SO1259 transcriptional regulator, LysR familychromosome CDS1307826 906 + 0.456954
SO1265 transcriptional regulator, putativechromosome CDS1313430 549 + 0.448087
SO1311 transcriptional regulatorchromosome CDS1366382 789 + 0.461343
SO1328 transcriptional regulator, LysR familychromosome CDS1385079 915 + 0.451366
SO1383 ATP-dependent RNA helicase, DEAD box familychromosome CDS1439566 1302 - 0.496928
SO1387 HD domain proteinchromosome CDS1443222 1269 + 0.44602
SO1389 ROK family proteinchromosome CDS1446733 795 + 0.45283
SO1393 transcriptional regulator, TetR familychromosome CDS1450446 618 + 0.488673
SO1408 helicase, putativechromosome CDS1462811 2964 - 0.474022
SO1415 transcriptional regulator, TetR familychromosome CDS1472049 783 + 0.40613
SO1422 transcriptional regulator, LysR familychromosome CDS1481489 954 + 0.368973
SO1445 transcriptional regulator, CopG familychromosome CDS1507802 309 - 0.488673
SO1461 protein kinase, putativechromosome CDS1519669 4131 + 0.455338
SO1469 transcriptional regulator, Cro/CI familychromosome CDS1534139 255 - 0.415686
SO1501 ATP-dependent RNA helicase, DEAD box familychromosome CDS1573651 1371 + 0.493071
SO1533 glycine cleavage system transcriptional activator, putativechromosome CDS1608405 912 + 0.486842
SO1566 acetyltransferase, GNAT familychromosome CDS1643613 519 + 0.510597
SO1578 transcriptional regulator, TetR familychromosome CDS1655033 612 + 0.454248
SO1582 transcriptional regulator, MarR familychromosome CDS1659719 540 + 0.507407
SO1607 transcriptional regulator, LysR familychromosome CDS1691569 945 + 0.468783
SO1614 acetyltransferase, GNAT familychromosome CDS1696347 639 + 0.447574
SO1648 cold shock domain family proteinchromosome CDS1734435 246 - 0.406504
SO1651 Snf2 family proteinchromosome CDS1737303 3213 + 0.472767
SO1656 ROK family proteinchromosome CDS1743565 921 + 0.489685
SO1661 transcriptional regulator, LysR familychromosome CDS1748799 987 - 0.427558
SO1687 transcriptional regulator, MerR familychromosome CDS1773703 390 - 0.45641
SO1703 transcriptional regulator, TetR familychromosome CDS1793412 321 + 0.52648
SO1712 transcriptional regulator, putativechromosome CDS1800265 1524 + 0.419291
SO1732 cold shock domain family proteinchromosome CDS1815974 675 - 0.444444
SO1758 conserved hypothetical proteinchromosome CDS1839228 693 + 0.483405
SO1762 transcriptional regulator, AraC/XylS familychromosome CDS1841189 837 - 0.492234
SO1774 conserved hypothetical proteinchromosome CDS1853738 1224 - 0.458333
SO1860 DNA-binding response regulator, LuxR familychromosome CDS1951805 645 + 0.471318
SO1876 NodD transcription activator-related proteinchromosome CDS1972582 684 + 0.387427
SO1883 acetyltransferase, GNAT familychromosome CDS1981490 435 - 0.475862
SO1887 conserved hypothetical proteinchromosome CDS1983349 603 - 0.502488
SO1898 transcriptional regulator, putativechromosome CDS1996463 405 - 0.496296
SO1907 transcriptional regulator, LysR familychromosome CDS2006104 897 - 0.457079
SO1916 transcriptional regulator, LysR familychromosome CDS2016443 882 - 0.481859
SO1965 transcriptional regulator, LysR familychromosome CDS2070050 915 + 0.471038
SO1986 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS2089099 669 - 0.436472
SO2046 transcriptional regulator, MarR familychromosome CDS2144419 462 + 0.484848
SO2053 transcriptional regulator, LysR familychromosome CDS2152753 876 - 0.481735
SO2081 ATP-dependent helicase, DinG familychromosome CDS2176362 1902 + 0.489485
SO2104 DNA-binding response regulator YgiX, putativechromosome CDS2201569 660 + 0.459091
SO2193 DNA-binding response regulatorchromosome CDS2305630 693 - 0.499278
SO2202 transcriptional regulator, LysR familychromosome CDS2316537 861 + 0.472706
SO2224 acetyltransferase, GNAT familychromosome CDS2341032 459 + 0.496732
SO2244 transcriptional regulator, LacI familychromosome CDS2359135 1056 + 0.467803
SO2263 Rrf2 family proteinchromosome CDS2378411 462 + 0.454545
SO2282 transcriptional regulator, GntR familychromosome CDS2395756 1359 - 0.463576
SO2366 response regulatorchromosome CDS2472307 1578 - 0.413815
SO2374 transcriptional regulator, LysR familychromosome CDS2479128 903 + 0.466224
SO2409 transcriptional regulator, LysR familychromosome CDS2513482 921 - 0.45494
SO2426 DNA-binding response regulatorchromosome CDS2533900 714 - 0.436975
SO2438 transcriptional regulator, LysR familychromosome CDS2550396 909 + 0.474147
SO2455 transcriptional regulator, LysR familychromosome CDS2571873 882 - 0.461451
SO2490 transcriptional regulator, RpiR familychromosome CDS2612896 855 + 0.447953
SO2493 transcriptional regulator, TetR familychromosome CDS2618065 720 - 0.454167
SO2519 transcriptional regulator, AraC familychromosome CDS2645013 1152 - 0.479167
SO2539 response regulatorchromosome CDS2669426 1977 - 0.417299
SO2541 response regulatorchromosome CDS2672082 1326 + 0.435143
SO2561 transcriptional regulator, LysR familychromosome CDS2690680 900 - 0.485556
SO2571 ATP-dependent RNA helicase, DEAD box familychromosome CDS2701334 1428 + 0.477591
SO2640 transcriptional regulator, MarR familychromosome CDS2775587 465 - 0.430108
SO2648 DNA-binding response regulator, LuxR familychromosome CDS2785216 663 + 0.463047
SO2652 prophage MuSo2, transcriptional regulator, Cro/CI familychromosome CDS2788307 747 - 0.432396
SO2653 transcriptional regulator, Ner familychromosome CDS2789206 225 + 0.431111
SO2676 conserved hypothetical proteinchromosome CDS2800887 291 + 0.487972
SO2725 transcriptional regulator, LuxR familychromosome CDS2842211 636 - 0.451258
SO2744 helicasechromosome CDS2864065 1773 + 0.466441
SO2763 conserved hypothetical proteinchromosome CDS2885665 816 + 0.384804
SO2787 cold shock domain family proteinchromosome CDS2909851 210 - 0.419048
SO2823 response regulatorchromosome CDS2944137 711 + 0.445851
SO2838 ATP-dependent RNA helicase, DEAD box familychromosome CDS2955718 1350 + 0.461481
SO2847 transcriptional regulator, LysR familychromosome CDS2966142 894 + 0.467562
SO2849 acetyltransferase, GNAT familychromosome CDS2967521 462 - 0.443723
SO2852 transcriptional regulator, GntR familychromosome CDS2976182 672 + 0.471726
SO2876 hypothetical proteinchromosome CDS2995390 1953 + 0.491551
SO2932 transcriptional regulator, AraC familychromosome CDS3066680 1062 - 0.444444
SO2989 prophage LambdaSo, transcriptional regulator, Cro/CI familychromosome CDS3113304 267 - 0.419476
SO2990 prophage LambdaSo, transcriptional regulator, Cro/CI familychromosome CDS3113660 819 + 0.449328
SO3014 conserved hypothetical proteinchromosome CDS3126431 597 - 0.462312
SO3059 formate hydrogenlyase transcriptional activator, putativechromosome CDS3172709 1527 + 0.465619
SO3096 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS3221892 564 + 0.478723
SO3125 ATP-dependent RNA helicase, DEAD box familychromosome CDS3252401 1284 - 0.482087
SO3169 transcriptional regulator, Cro/CI familychromosome CDS3305360 381 - 0.409449
SO3194 transcriptional activator rfaH, putativechromosome CDS3334737 501 - 0.417166
SO3277 transcriptional regulator, TetR familychromosome CDS3417070 567 - 0.458554
SO3297 transcriptional regulator, LysR familychromosome CDS3441525 846 - 0.328605
SO3305 DNA-binding response regulator, LuxR familychromosome CDS3454571 621 - 0.37037
SO3318 transcriptional regulator, LysR familychromosome CDS3471164 894 - 0.510067
SO3323 acetyltransferase, GNAT familychromosome CDS3474759 531 - 0.467043
SO3324 acetyltransferase, GNAT familychromosome CDS3475353 612 - 0.421569
SO3328 acetyltransferase, GNAT familychromosome CDS3476985 459 - 0.427015
SO3346 conserved hypothetical proteinchromosome CDS3492032 564 + 0.45922
SO3363 transcriptional regulator, LysR familychromosome CDS3506060 939 - 0.464324
SO3385 transcriptional regulator, MerR familychromosome CDS3523518 1038 - 0.449904
SO3388 ATP-dependent RNA helicase, DEAD box familychromosome CDS3526441 1230 - 0.470732
SO3393 transcriptional regulator, TetR familychromosome CDS3534653 582 + 0.443299
SO3460 transcriptional regulator, LysR familychromosome CDS3605715 900 - 0.447778
SO3470 conserved hypothetical protein TIGR00244chromosome CDS3615391 450 - 0.502222
SO3473 transcriptional regulator, LysR familychromosome CDS3619269 924 - 0.492424
SO3488 transcriptional regulator, AraC/XylS familychromosome CDS3635848 768 + 0.466146
SO3494 transcriptional regulator, TetR familychromosome CDS3644704 633 + 0.518167
SO3516 transcriptional regulator, LacI familychromosome CDS3670145 1017 + 0.418879
SO3551 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS3707695 603 - 0.472637
SO3584 conserved hypothetical proteinchromosome CDS3750985 621 - 0.47504
SO3594 transcriptional regulatory protein RstA, putativechromosome CDS3756694 714 + 0.459384
SO3608 serine/threonine protein kinasechromosome CDS3768974 1116 - 0.370072
SO3627 transcriptional regulator, TetR familychromosome CDS3786662 786 + 0.346056
SO3660 sigma-54 dependent transcriptional regulator/sensory box proteinchromosome CDS3812853 1467 + 0.475801
SO3684 transcriptional regulator, TetR familychromosome CDS3834798 609 + 0.428571
SO3743 transcriptional regulator, TetR familychromosome CDS3888561 480 - 0.447917
SO3765 conserved hypothetical proteinchromosome CDS3914606 690 + 0.455072
SO3782 hypothetical proteinchromosome CDS3934007 945 - 0.491005
SO3783 ATP-dependent RNA helicase, DEAD box familychromosome CDS3935464 1608 + 0.497512
SO3831 acetyltransferase, GNAT familychromosome CDS3980977 414 + 0.454106
SO3840 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS3989913 534 + 0.456929
SO3867 transcriptional regulator, Cro/CI familychromosome CDS4014236 228 - 0.399123
SO3874 transcriptional regulator, LysR familychromosome CDS4021219 972 + 0.367284
SO3909 conserved hypothetical proteinchromosome CDS4056057 201 - 0.452736
SO3949 BolA/YrbA family proteinchromosome CDS4094712 252 - 0.440476
SO3982 DNA-binding nitrate/nitrite response regulatorchromosome CDS4119636 630 + 0.450794
SO4003 response regulatorchromosome CDS4143980 1074 + 0.46648
SO4016 conserved hypothetical proteinchromosome CDS4161663 1344 - 0.474702
SO4020 transcriptional regulator, LysR familychromosome CDS4169519 966 - 0.463768
SO4052 transcriptional regulator, MarR familychromosome CDS4205060 474 - 0.504219
SO4140 transcriptional regulator, LysR familychromosome CDS4296602 822 - 0.482968
SO4154 transcriptional regulator, LysR familychromosome CDS4329024 912 + 0.529605
SO4172 DNA-binding response regulatorchromosome CDS4344666 552 - 0.519928
SO4251 transcriptional regulator, TetR familychromosome CDS4427793 594 + 0.446128
SO4303 hypothetical proteinchromosome CDS4481686 504 + 0.492063
SO4326 transcriptional regulator, TetR familychromosome CDS4517790 609 + 0.426929
SO4337 transcriptional regulator, AsnC familychromosome CDS4528777 501 + 0.473054
SO4388 DNA-binding response regulatorchromosome CDS4584567 684 + 0.413743
SO4393 acetyltransferase, GNAT familychromosome CDS4589077 456 + 0.504386
SO4397 conserved hypothetical proteinchromosome CDS4590988 438 - 0.497717
SO4428 DNA-binding response regulatorchromosome CDS4619137 678 - 0.467552
SO4444 capsular synthesis regulator component B, putativechromosome CDS4632035 639 - 0.363067
SO4468 transcriptional regulator, TetR familychromosome CDS4656754 597 + 0.438861
SO4479 sigma-54 dependent transcriptional regulatorchromosome CDS4667254 1851 - 0.507293
SO4487 DNA-binding response regulatorchromosome CDS4674187 663 + 0.506787
SO4489 acetyltransferase, GNAT familychromosome CDS4676296 465 + 0.470968
SO4524 transcriptional regulator, LysR familychromosome CDS4719235 978 + 0.5
SO4542 transcriptional regulator, LysR familychromosome CDS4739232 891 + 0.405163
SO4556 transcriptional regulator, LysR familychromosome CDS4752399 966 + 0.467909
SO4567 transcriptional regulator, AsnC familychromosome CDS4763020 432 + 0.451389
SO4571 transcriptional regulator, LysR familychromosome CDS4765360 960 - 0.366667
SO4589 transcriptional regulator, AraC familychromosome CDS4783665 1002 - 0.464072
SO4623 DNA-binding response regulatorchromosome CDS4819048 678 - 0.477876
SO4624 transcriptional regulator, LuxR familychromosome CDS4819728 747 - 0.419009
SO4629 conserved hypothetical proteinchromosome CDS4825116 2355 - 0.504883
SO4637 DNA-binding response regulatorchromosome CDS4834383 669 + 0.45441
SO4647 DNA-binding response regulatorchromosome CDS4842876 696 + 0.472701
SO4675 transcriptional regulator, TetR familychromosome CDS4873469 648 - 0.432099
SO4677 conserved hypothetical proteinchromosome CDS4875707 753 - 0.50332
SO4705 transcriptional regulator, putativechromosome CDS4907149 1512 - 0.492063
SO4716 acetyltransferase, GNAT familychromosome CDS4919666 468 + 0.452991
SO4742 transcriptional regulator, DeoR familychromosome CDS4953274 771 - 0.48249
SO4755 ParB family proteinchromosome CDS4965317 879 - 0.426621
SOA0002 type II restriction-modification system activator, putativemegaplasmid CDS2651 228 + 0.377193
SOA0031 partition protein, ParB family, putativemegaplasmid CDS22779 1875 + 0.4832
SOA0060 acetyltransferase, GNAT familymegaplasmid CDS49031 528 + 0.409091
SOA0068 conserved hypothetical proteinmegaplasmid CDS55521 288 - 0.458333
SOA0078 conserved hypothetical proteinmegaplasmid CDS61181 243 + 0.432099
SOA0096 partitioning protein Bmegaplasmid CDS74611 1095 + 0.383562
SOA0108 hypothetical proteinmegaplasmid CDS88762 387 + 0.335917
SOA0132 conserved hypothetical proteinmegaplasmid CDS116515 459 - 0.285403
SOA0165 transcriptional regulator, LysR familymegaplasmid CDS154093 870 + 0.457471
arcA aerobic respiration control protein ArcAchromosome CDS4126001 717 + 0.461646
argR arginine repressorchromosome CDS782703 471 - 0.447983
arsR arsenical resistence operon repressorchromosome CDS553907 345 + 0.478261
asnC regulatory protein AsnCchromosome CDS3951642 462 + 0.478355
cobB cobB proteinchromosome CDS2042650 732 + 0.479508
cpxR transcriptional regulatory protein CpxRchromosome CDS4665126 687 + 0.458515
cspD stress response protein CspDchromosome CDS2764097 207 + 0.429952
cysB cys regulon transcriptional activatorchromosome CDS2785966 975 - 0.433846
dbpA ATP-dependent RNA helicase DbpAchromosome CDS924809 1377 + 0.481481
deaD ATP-dependent RNA helicase DeaDchromosome CDS4189577 1872 + 0.505876
dinG ATP-dependent helicase DinGchromosome CDS1907796 2073 - 0.479981
fadR fatty acid metabolism regulator proteinchromosome CDS3007456 723 - 0.448133
fis DNA-binding protein Fischromosome CDS406898 306 - 0.457516
flgM negative regulator of flagellin synthesis FlgMchromosome CDS3391687 321 + 0.429907
fliA RNA polymerase sigma-27 factorchromosome CDS3350155 714 - 0.435574
greA transcription elongation factor GreAchromosome CDS1234415 477 + 0.450734
greB transcription elongation factor GreBchromosome CDS4827600 504 - 0.486111
hepA RNA polymerase-associated protein HepAchromosome CDS594280 2907 - 0.502236
hlyU transcriptional regulator HlyUchromosome CDS3691803 297 - 0.383838
hutC histidine utilization repressorchromosome CDS103967 708 + 0.539548
hypB hydrogenase accessory protein HypBchromosome CDS2188479 795 - 0.475472
iciA chromosome initiation inhibitorchromosome CDS2988995 921 + 0.485342
ilvY transcriptional regulator ilvYchromosome CDS4543417 873 + 0.512028
kdpE transcriptional regulatory protein KdpEchromosome CDS66406 690 - 0.498551
lexA LexA repressorchromosome CDS4799182 621 + 0.479871
lrp leucine-responsive regulatory proteinchromosome CDS2416266 507 + 0.402367
metJ met repressorchromosome CDS4212626 315 + 0.501587
metR transcriptional activator protein MetRchromosome CDS830162 906 - 0.487859
mfd transcription-repair coupling factorchromosome CDS2367847 3495 - 0.488984
nhaR transcriptional activator protein NhaRchromosome CDS1395632 909 + 0.445545
nusA N utilization substance protein Achromosome CDS1246441 1500 + 0.476667
nusB N utilization substance protein Bchromosome CDS3611302 405 - 0.45679
nusG transcription antitermination protein NusGchromosome CDS229122 552 + 0.447464
ompR transcriptional regulatory protein OmpRchromosome CDS4828759 726 + 0.545455
pdhR pyruvate dehydrogenase complex repressorchromosome CDS437566 753 + 0.50332
phoB phosphate regulon response regulator PhoBchromosome CDS1634454 720 + 0.491667
phoP transcriptional regulatory protein PhoPchromosome CDS2049116 675 - 0.445926
pspA phage shock protein Achromosome CDS1897828 684 + 0.444444
pspC phage shock protein Cchromosome CDS1898755 387 + 0.439276
pspF psp operon transcriptional activatorchromosome CDS1896559 1092 - 0.466117
rbcR rubisco operon transcriptional regulatorchromosome CDS3904193 993 - 0.500504
recG ATP-dependent DNA helicase RecGchromosome CDS4558251 2067 + 0.517658
relA GTP pyrophosphokinasechromosome CDS3598092 2208 - 0.503623
rho transcription termination factor Rhochromosome CDS421774 1266 - 0.459716
rnc ribonuclease IIIchromosome CDS1404926 681 + 0.459618
rnk regulator of nucleoside diphosphate kinasechromosome CDS2040912 408 + 0.485294
rpoA DNA-directed RNA polymerase, alpha subunitchromosome CDS257763 990 + 0.479798
rpoB DNA-directed RNA polymerase, beta subunitchromosome CDS232367 4038 + 0.474492
rpoC DNA-directed RNA polymerase, beta' subunitchromosome CDS236488 4218 + 0.48862
rpoD RNA polymerase sigma-70 factorchromosome CDS1335571 1851 - 0.479741
rpoE RNA polymerase sigma-24 factorchromosome CDS1399196 579 + 0.431779
rpoH RNA polymerase sigma-32 factorchromosome CDS4778232 858 - 0.447552
rpoN RNA polymerase sigma-54 factorchromosome CDS4102103 1476 + 0.470867
rpoS RNA polymerase sigma-38 factorchromosome CDS3577258 981 - 0.455657
rpoZ DNA-directed RNA polymerase, omega subunitchromosome CDS370404 279 - 0.519713
rsd regulator of sigma Dchromosome CDS458543 486 - 0.442387
spoT guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolasechromosome CDS368255 2106 - 0.51567
srmB ATP-dependent RNA helicase SrmBchromosome CDS982197 1263 - 0.502771
torR torcad operon transcriptional regulatory protein TorRchromosome CDS1276228 711 + 0.448664
trpI trpba operon transcriptional activatorchromosome CDS551820 885 - 0.477966
trpR trp operon repressorchromosome CDS3559588 276 - 0.40942
tyrR transcriptional regulatory protein TyrRchromosome CDS1754957 1539 + 0.497076
umuD umuD proteinmegaplasmid CDS11335 405 - 0.471605
vacB ribonuclease Rchromosome CDS4079522 2427 - 0.490317