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Gene list

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COG category: Transcription
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 257

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Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SBO_2706 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2709408 648 - 0.324074
NA SBO_1557 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS1543208 762 + 0.396325
NA SBO_0707 putative toxinSubName: Full=Putative toxin; chromosome CDS722858 468 + 0.538462
NA SBO_3649 hypothetical bacteriophage proteinSubName: Full=Hypothetical bacteriophage protein; chromosome CDS3665645 204 + 0.504902
NA SBO_1780 putative DEOR-type transcriptional regulatorSubName: Full=Putative DEOR-type transcriptional regulator; chromosome CDS1758735 750 + 0.496
NA SBO_1139 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS1141135 207 + 0.589372
NA SBO_2133 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2106574 207 - 0.487923
NA SBO_0255 putative phage repressorSubName: Full=Putative phage repressor; chromosome CDS270767 675 + 0.447407
NA SBO_0973 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS998272 420 + 0.407143
NA SBO_4169 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4221685 267 - 0.588015
NA SBO_2272 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2258547 630 - 0.477778
NA SBO_3502 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3495756 297 - 0.488215
NA SBO_1240 putative regulatorSubName: Full=Putative regulator; chromosome CDS1234524 792 - 0.497475
NA SBO_4428 putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS4483172 348 + 0.445402
NA SBO_4049 putative transcriptional regulator of sorbose uptake and utilization genesSubName: Full=Putative transcriptional regulator of sorbose uptake and utilization genes; chromosome CDS4091931 948 - 0.493671
NA SBO_2555 conserved hypothetical proteinRecName: Full=HTH-type transcriptional regulator IscR; chromosome CDS2557033 489 - 0.539877
NA SBO_2408 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS2403060 858 + 0.529138
NA SBO_2852 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2856796 300 - 0.526667
NA SBO_1280 putative enzymeSubName: Full=Putative enzyme; chromosome CDS1268353 1911 + 0.55416
NA SBO_1366 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1344262 291 - 0.439863
NA SBO_0753 putative damage-inducible proteinSubName: Full=Putative damage-inducible protein; chromosome CDS769189 306 + 0.447712
NA SBO_1869 putative sensor-type regulatorSubName: Full=Putative sensor-type regulator; chromosome CDS1851863 1929 - 0.512701
NA SBO_1435 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS1411106 912 + 0.421053
NA SBO_0748 repressor proteinSubName: Full=Repressor protein; chromosome CDS763483 570 - 0.398246
NA SBO_1487 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1464190 600 - 0.518333
NA SBO_2407 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS2402313 735 + 0.47483
acrR SBO_0364 acrAB operon repressorSubName: Full=AcrAB operon repressor; chromosome CDS379072 648 + 0.452161
adiY SBO_4143 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS4186657 762 - 0.414698
agaR SBO_3249 putative DEOR-type transcriptional regulator of aga operonSubName: Full=Putative DEOR-type transcriptional regulator of aga operon; chromosome CDS3253718 831 + 0.481348
araC SBO_0051 AraCSubName: Full=AraC; chromosome CDS57972 879 + 0.526735
arcA SBO_4464 negative response regulator of genes in aerobic pathwaysSubName: Full=Negative response regulator of genes in aerobic pathways; chromosome CDS4517761 717 - 0.509066
argR SBO_3152 ArgRRecName: Full=Arginine repressor; chromosome CDS3157303 471 - 0.488323
arsR SBO_3499 transcriptional repressor of chromosomal ars operonSubName: Full=Transcriptional repressor of chromosomal ars operon; chromosome CDS3493487 354 + 0.497175
ascG SBO_2804 ascBF operon repressorSubName: Full=AscBF operon repressor; chromosome CDS2812579 1014 + 0.527613
asnC SBO_3744 AsnCSubName: Full=AsnC; chromosome CDS3762793 459 + 0.492375
baeR SBO_0905 transcriptional response regulatory proteinSubName: Full=Transcriptional response regulatory protein; chromosome CDS934645 723 + 0.536653
basR SBO_4140 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS4182771 669 - 0.529148
citB SBO_0485 CitBRecName: Full=Transcriptional regulatory protein; chromosome CDS504271 681 + 0.503671
cobB SBO_1941 putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferaseRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1914197 822 - 0.510949
cpxR SBO_3930 transcriptional regulator in 2-component systemSubName: Full=Transcriptional regulator in 2-component system; chromosome CDS3958548 699 - 0.513591
creB SBO_4461 catabolic regulation response regulatorSubName: Full=Catabolic regulation response regulator; chromosome CDS4514202 666 + 0.551051
csgD SBO_2028 putative 2-component transcriptional regulator for 2nd curli operonSubName: Full=Putative 2-component transcriptional regulator for 2nd curli operon; chromosome CDS1997606 651 + 0.416283
csiE SBO_2559 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2560622 1302 + 0.511521
cspA SBO_3558 cold shock protein 7.4SubName: Full=Cold shock protein 7.4; chromosome CDS3566922 213 + 0.483568
cspC SBO_1236 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS1232443 210 - 0.466667
cspD SBO_0813 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS825170 225 - 0.484444
cspE SBO_0488 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS507700 210 + 0.438095
cspG SBO_2241 CspGSubName: Full=CspG; chromosome CDS2229419 213 - 0.441315
cspH SBO_2242 cold shock-like proteinSubName: Full=Cold shock-like protein; chromosome CDS2229917 213 + 0.478873
cysB SBO_1789 positive transcriptional regulator for cysteine regulonSubName: Full=Positive transcriptional regulator for cysteine regulon; chromosome CDS1768097 975 - 0.486154
cytR SBO_3951 CytRSubName: Full=CytR; chromosome CDS3977007 1026 - 0.515595
dbpA SBO_1718 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1698741 1374 - 0.516739
deaD SBO_3220 inducible ATP-independent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3227057 1941 + 0.552808
deoR SBO_0736 DeoRSubName: Full=DeoR; chromosome CDS753956 759 - 0.500659
dinG SBO_0687 probably ATP-dependent helicaseSubName: Full=Probably ATP-dependent helicase; chromosome CDS699859 2151 + 0.543468
ebgR SBO_2934 regulator of ebg operonSubName: Full=Regulator of ebg operon; chromosome CDS2938095 984 + 0.511179
emrR SBO_2833 regulator of plasmid mcrB operonSubName: Full=Regulator of plasmid mcrB operon; chromosome CDS2840435 531 - 0.491525
envR SBO_3258 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3261036 663 - 0.440422
evgA SBO_2395 putative positive transcription regulatorSubName: Full=Putative positive transcription regulator; chromosome CDS2385687 615 + 0.403252
exuR SBO_2961 ExuRSubName: Full=ExuR; chromosome CDS2968844 777 + 0.498069
fadR SBO_1885 FadRRecName: Full=Fatty acid metabolism regulator protein; chromosome CDS1869834 720 - 0.515278
farR SBO_0588 transcriptional regulator of succinylCoA synthetase operonSubName: Full=Transcriptional regulator of succinylCoA synthetase operon; chromosome CDS608968 723 - 0.481328
fhlA SBO_2789 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operonsSubName: Full=Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; chromosome CDS2796819 2079 - 0.525253
fimZ SBO_0429 fimbrial Z proteinSubName: Full=Fimbrial Z protein; chromosome CDS443861 576 - 0.373264
fis SBO_3255 site-specific DNA inversion stimulation factorRecName: Full=DNA-binding protein Fis; chromosome CDS3259504 297 + 0.47138
flgM SBO_1993 anti-FliA factorSubName: Full=Anti-FliA factor; chromosome CDS1966528 330 + 0.533333
fliA SBO_1084 alternative sigma factor 28RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; chromosome CDS1094665 720 + 0.540278
fruR SBO_0068 transcriptional repressor of fru operon and othersSubName: Full=Transcriptional repressor of fru operon and others; chromosome CDS76031 1005 + 0.549254
fucR SBO_2688 positive regulator of the fuc operonSubName: Full=Positive regulator of the fuc operon; chromosome CDS2695996 732 + 0.480874
galR SBO_2729 repressor of galETK operonSubName: Full=Repressor of galETK operon; chromosome CDS2741652 1032 + 0.526163
galS SBO_2176 mgl repressorSubName: Full=Mgl repressor; chromosome CDS2153779 1041 + 0.520653
gatR SBO_0911 galactitol utilization operon repressorSubName: Full=Galactitol utilization operon repressor; chromosome CDS941136 780 - 0.464103
gcvA SBO_2691 positive regulator of gcv operonSubName: Full=Positive regulator of gcv operon; chromosome CDS2698278 918 - 0.493464
glpR SBO_3411 repressor of the glp operonSubName: Full=Repressor of the glp operon; chromosome CDS3402636 759 - 0.537549
gntR SBO_3435 regulator of gluconate operonSubName: Full=Regulator of gluconate operon; chromosome CDS3427221 996 - 0.550201
greA SBO_3201 transcription elongation factorRecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS3206290 462 + 0.487013
greB SBO_3393 Transcription elongation factorRecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS3378908 477 + 0.496855
hcaR SBO_2561 transcriptional activator of hca clusterSubName: Full=Transcriptional activator of hca cluster; chromosome CDS2563214 891 - 0.500561
hepA SBO_0046 probable ATP-dependent RNA helicaseRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS48029 2907 - 0.551084
hpcR SBO_4413 homoprotocatechuate degradative operon repressorSubName: Full=Homoprotocatechuate degradative operon repressor; chromosome CDS4467793 447 + 0.503356
hypB SBO_2793 guanine-nucleotide binding proteinSubName: Full=Guanine-nucleotide binding protein; chromosome CDS2801362 873 - 0.553265
iciA SBO_3078 replication initiation inhibitorRecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; chromosome CDS3077483 894 - 0.543624
iclR SBO_4039 repressor of aceBA operonSubName: Full=Repressor of aceBA operon; chromosome CDS4079444 864 - 0.530093
ilvY SBO_3784 positive regulator for ilvCSubName: Full=Positive regulator for ilvC; chromosome CDS3805081 891 - 0.579125
kdpE SBO_0556 regulator of kdp operonSubName: Full=Regulator of kdp operon; chromosome CDS571962 678 - 0.567847
lexA SBO_4074 regulator for SOS(lexA) regulonRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS4115936 609 - 0.518883
lldR SBO_3609 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS3626432 777 + 0.540541
lrhA SBO_2322 NADH dehydrogenase transcriptional regulatorSubName: Full=NADH dehydrogenase transcriptional regulator; chromosome CDS2312521 939 - 0.498403
lrp SBO_0822 LrpSubName: Full=Lrp; chromosome CDS835399 495 + 0.474747
lysR SBO_2731 positive regulator for lysSubName: Full=Positive regulator for lys; chromosome CDS2744074 936 + 0.532051
malI SBO_1514 repressor of malX and Y genesSubName: Full=Repressor of malX and Y genes; chromosome CDS1491603 1029 + 0.544218
malT SBO_3407 positive regulator of mal regulonRecName: Full=HTH-type transcriptional regulator MalT; AltName: Full=ATP-dependent transcriptional activator MalT; chromosome CDS3395873 2706 + 0.542868
marA SBO_1649 multiple antibiotic resistance proteinSubName: Full=Multiple antibiotic resistance protein; chromosome CDS1635060 390 + 0.448718
marR SBO_1648 multiple antibiotic resistance proteinSubName: Full=Multiple antibiotic resistance protein; chromosome CDS1634669 378 + 0.497355
melR SBO_4145 regulator of melibiose operonSubName: Full=Regulator of melibiose operon; chromosome CDS4190209 909 - 0.50055
metJ SBO_3958 MetJRecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; chromosome CDS3986910 318 - 0.518868
metR SBO_3840 MetRSubName: Full=MetR; chromosome CDS3861991 954 - 0.557652
mfd SBO_1947 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1920574 3447 + 0.550044
mlc SBO_1542 putative NAGC-like transcriptional regulatorSubName: Full=Putative NAGC-like transcriptional regulator; chromosome CDS1523616 1221 + 0.520066
mtlR SBO_3599 repressor for mtlSubName: Full=Repressor for mtl; chromosome CDS3614721 588 + 0.508503
nagC SBO_0538 transcriptional repressor of nag operonSubName: Full=Transcriptional repressor of nag operon; chromosome CDS551256 1221 - 0.531532
narL SBO_1845 pleiotrophic regulation of anaerobic respirationSubName: Full=Pleiotrophic regulation of anaerobic respiration; chromosome CDS1827363 651 + 0.516129
narP SBO_2114 nitrate/nitrite response regulatorSubName: Full=Nitrate/nitrite response regulator; chromosome CDS2093733 648 - 0.518519
nhaR SBO_0019 transcriptional activator of nhaASubName: Full=Transcriptional activator of nhaA; chromosome CDS18504 906 + 0.479029
nlp SBO_3194 regulatory factor of maltose metabolismSubName: Full=Regulatory factor of maltose metabolism; chromosome CDS3199949 279 - 0.494624
nrfB SBO_4102 formate-dependent nitrite reductase complex penta-heme cytochrome cSubName: Full=Formate-dependent nitrite reductase complex penta-heme cytochrome c; chromosome CDS4145507 573 + 0.539267
nusA SBO_3213 NusASubName: Full=NusA; chromosome CDS3217465 1488 + 0.528226
nusB SBO_0310 NusBRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS324108 420 + 0.530952
nusG SBO_4002 NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS4036165 546 + 0.516484
ompR SBO_3392 OmpRSubName: Full=OmpR; chromosome CDS3377961 720 - 0.547222
oxyR SBO_3980 OxyRSubName: Full=OxyR; chromosome CDS4017077 918 + 0.555556
pdhR SBO_0102 PdhRSubName: Full=PdhR; chromosome CDS110752 765 + 0.552941
phnF SBO_4128 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS4170888 726 - 0.62259
phnO SBO_4119 PhnOSubName: Full=PhnO; chromosome CDS4164286 450 - 0.588889
phoB SBO_0293 positive response regulator for pho regulonSubName: Full=Positive response regulator for pho regulon; chromosome CDS306208 690 + 0.543478
phoP SBO_1909 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS1889212 672 + 0.46875
pocR SBO_1208 pdu/cob regulatory proteinSubName: Full=Pdu/cob regulatory protein; chromosome CDS1205763 927 + 0.449838
pspA SBO_1758 phage shock proteinSubName: Full=Phage shock protein; chromosome CDS1733588 669 - 0.493274
pspC SBO_1756 phage shock proteinSubName: Full=Phage shock protein; chromosome CDS1732951 360 - 0.505556
pspF SBO_1759 psp operon transcriptional activatorSubName: Full=Psp operon transcriptional activator; chromosome CDS1734407 993 + 0.519637
purR SBO_1473 PurRRecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; chromosome CDS1450123 1026 - 0.536062
qseA SBO_3144 QseASubName: Full=QseA; chromosome CDS3150690 930 - 0.527957
qseB SBO_2884 QseBSubName: Full=QseB; chromosome CDS2888396 660 + 0.513636
rbsR SBO_3767 regulator for rbs operonSubName: Full=Regulator for rbs operon; chromosome CDS3786433 993 + 0.506546
rcsA SBO_1056 positive regulator for ctr capsule biosynthesis, positive transcription factorSubName: Full=Positive regulator for ctr capsule biosynthesis, positive transcription factor; chromosome CDS1069835 624 - 0.378205
rcsB SBO_2090 positive response regulator for colanic capsule biosynthesisSubName: Full=Positive response regulator for colanic capsule biosynthesis; chromosome CDS2068776 651 - 0.47619
recG SBO_3725 DNA helicaseSubName: Full=DNA helicase; chromosome CDS3741021 2082 - 0.568204
relA SBO_2665 (p)ppGpp synthetase ISubName: Full=(P)ppGpp synthetase I; chromosome CDS2668130 2235 - 0.540492
rfaH SBO_3854 RfaHRecName: Full=Transcription antitermination protein RfaH; chromosome CDS3877769 489 - 0.492843
rfaP SBO_3632 RfaPSubName: Full=RfaP; chromosome CDS3650756 798 - 0.474937
rhaR SBO_3924 positive regulator for rhaRS operonRecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; chromosome CDS3952132 939 + 0.498403
rhaS SBO_3923 positive regulator for rhaBAD operonRecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; chromosome CDS3951312 837 + 0.518519
rhlB SBO_3790 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3813851 1266 - 0.522117
rhlE SBO_0685 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS697661 1365 + 0.564835
rho SBO_3793 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS3815903 1260 + 0.503968
rnb SBO_1776 RNase IIRecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS1753412 1935 + 0.5323
rnc SBO_2595 RNase IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS2600461 681 - 0.506608
rnk SBO_0475 regulator of nucleoside diphosphate kinaseRecName: Full=Regulator of nucleoside diphosphate kinase; chromosome CDS494002 411 - 0.547445
rob SBO_4459 right origin-binding proteinSubName: Full=Right origin-binding protein; chromosome CDS4512612 870 - 0.531034
rpoA SBO_3289 RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS3288322 990 - 0.520202
rpoB SBO_4007 RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS4039668 4029 + 0.526185
rpoC SBO_4008 RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS4043773 4224 + 0.537405
rpoD SBO_2925 RNA polymerase sigma(70) factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS2928238 1842 + 0.530402
rpoE SBO_2601 RNA polymerase sigma-E factorRecName: Full=RNA polymerase sigma factor; chromosome CDS2606516 576 - 0.489583
rpoH SBO_3458 RNA polymerase sigma(32) factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS3449319 855 - 0.538012
rpoN SBO_3180 RpoNRecName: Full=RNA polymerase sigma-54 factor; chromosome CDS3188987 1434 - 0.528591
rpoS SBO_2779 RNA polymerase sigma S factorRecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; chromosome CDS2785680 996 + 0.519076
rpoZ SBO_3728 RNA polymerase omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS3745931 276 - 0.532609
rstA SBO_1528 response transcriptional regulatory proteinSubName: Full=Response transcriptional regulatory protein; chromosome CDS1509339 729 - 0.486968
rtcR SBO_3410 putative 2-component regulatorSubName: Full=Putative 2-component regulator; chromosome CDS3401056 1599 + 0.545341
sdiA SBO_1090 transcriptional regulator of ftsQAZ gene clusterSubName: Full=Transcriptional regulator of ftsQAZ gene cluster; chromosome CDS1099622 723 + 0.460581
slyA SBO_1492 transcriptional regulator for cryptic hemolysinRecName: Full=Transcriptional regulator SlyA; chromosome CDS1469982 441 + 0.47619
spoT SBO_3727 (p)ppGpp synthetase IISubName: Full=(P)ppGpp synthetase II; chromosome CDS3743804 2109 - 0.539118
srlR SBO_2811 regulator for glucitol operonSubName: Full=Regulator for glucitol operon; chromosome CDS2822026 774 - 0.485788
srmB SBO_2606 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2611242 1335 + 0.550562
tdcA SBO_2983 transcriptional activator of tdc operonSubName: Full=Transcriptional activator of tdc operon; chromosome CDS2988235 939 - 0.42279
torR SBO_2236 response transcriptional regulator for torASubName: Full=Response transcriptional regulator for torA; chromosome CDS2223178 693 + 0.52381
treR SBO_4205 treRSubName: Full=TreR; chromosome CDS4255153 966 + 0.540373
trpR SBO_4456 regulator for trp operon and aroHRecName: Full=Trp operon repressor; chromosome CDS4510984 327 + 0.538226
ttk SBO_3643 putative transcriptional regulatorRecName: Full=Nucleoid occlusion factor SlmA; chromosome CDS3660050 639 + 0.525822
tyrR SBO_1747 TyrRSubName: Full=TyrR; chromosome CDS1725824 1542 - 0.520104
uhpA SBO_3700 UhpASubName: Full=UhpA; chromosome CDS3715333 591 + 0.588832
uidR SBO_1518 repressor for uid operonSubName: Full=Repressor for uid operon; chromosome CDS1495179 591 + 0.50423
umuD SBO_1889 UmuDSubName: Full=UmuD; chromosome CDS1874304 420 - 0.483333
uvrY SBO_1092 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS1101093 657 + 0.496195
uxuR SBO_4375 regulator for uxu operonSubName: Full=Regulator for uxu operon; chromosome CDS4428522 774 + 0.537468
vacB SBO_4277 putative enzymeRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS4325184 2484 - 0.543881
xylR SBO_3577 putative regulator of xyl operonSubName: Full=Putative regulator of xyl operon; chromosome CDS3584080 1179 + 0.48855
yaeG SBO_0151 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS168474 1164 + 0.526632
yaeO SBO_0177 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS199662 261 - 0.471264
yafC SBO_0197 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS215921 915 - 0.495082
yaiV SBO_0270 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS283632 669 + 0.402093
ybaD SBO_0307 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS321973 450 + 0.508889
ybaO SBO_0341 putative LRP-like transcriptional regulatorSubName: Full=Putative LRP-like transcriptional regulator; chromosome CDS357144 546 + 0.489011
ybbI SBO_0389 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS407815 408 + 0.583333
ybbU SBO_0410 putative regulatorSubName: Full=Putative regulator; chromosome CDS427077 816 + 0.525735
ybeF SBO_0493 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS510835 801 - 0.470662
ybiH SBO_0684 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS696761 684 - 0.542398
ycaN SBO_2184 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS2162391 909 - 0.468647
ycdC SBO_2044 putative tet operon regulatorSubName: Full=Putative tet operon regulator; chromosome CDS2015961 639 - 0.510172
ycfQ SBO_1950 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1925629 711 + 0.49789
ycfX SBO_1942 putative NAGC-like transcriptional regulatorRecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; chromosome CDS1915034 912 - 0.520833
ycjC SBO_1763 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1739855 558 - 0.508961
ycjZ SBO_1734 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1716272 900 - 0.467778
ydaK SBO_1722 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1703944 909 - 0.492849
ydfH SBO_1614 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1602869 867 + 0.484429
ydhB SBO_1472 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1449194 933 + 0.538049
yeaM SBO_1303 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS1288115 822 + 0.501217
yeaT SBO_1289 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1279981 945 + 0.519577
yebK SBO_1161 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1161743 870 + 0.489655
yedW SBO_1037 putative 2-component transcriptional regulatorSubName: Full=Putative 2-component transcriptional regulator; chromosome CDS1054290 720 + 0.431944
yeeY SBO_0841 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS856878 930 - 0.504301
yegW SBO_0922 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS952231 747 - 0.514056
yehT SBO_0948 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS979817 735 - 0.496599
yehV SBO_1017 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS1037181 648 - 0.535494
yeiE SBO_2170 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS2145841 882 + 0.536281
yejH SBO_2140 putative ATP-dependent helicaseSubName: Full=Putative ATP-dependent helicase; chromosome CDS2112631 1761 - 0.533788
yfaH SBO_2056 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2029730 207 - 0.415459
yfeD SBO_2425 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2420834 393 + 0.458015
yfeG SBO_2462 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS2452443 1053 - 0.533713
yfeR SBO_2432 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS2423799 927 - 0.538296
yfeT SBO_2452 conserved hypothetical proteinRecName: Full=HTH-type transcriptional regulator MurR; AltName: Full=MurPQ operon repressor; chromosome CDS2443101 858 - 0.511655
yfhH SBO_2589 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2595766 921 + 0.510315
yfiE SBO_2607 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS2612785 927 - 0.487594
ygaA SBO_2809 putative 2-component transcriptional regulatorRecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; chromosome CDS2819482 1590 + 0.558491
ygaE SBO_2855 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS2857970 663 - 0.532428
ygbI SBO_2785 putative DEOR-type transcriptional regulatorSubName: Full=Putative DEOR-type transcriptional regulator; chromosome CDS2791971 798 + 0.508772
ygcP SBO_2652 putative anti-terminator regulatory proteinSubName: Full=Putative anti-terminator regulatory protein; chromosome CDS2655962 576 + 0.46875
ygfI SBO_3073 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS3070956 897 + 0.443701
yggD SBO_3059 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3058349 510 + 0.486275
ygjM SBO_2943 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2950955 417 - 0.486811
yhaJ SBO_2972 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS2975426 897 - 0.560758
yhcI SBO_3167 putative NAGC-like transcriptional regulatorRecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; chromosome CDS3172091 909 + 0.584158
yhcK SBO_3163 putative FADA-type transcriptional regulatorRecName: Full=Transcriptional regulator NanR; chromosome CDS3167985 792 + 0.522727
yhcO SBO_3150 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3156346 273 + 0.428571
yhdM SBO_3286 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3286987 426 - 0.497653
yhfR SBO_3362 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3346032 798 + 0.501253
yhgF SBO_3394 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3379580 2223 + 0.569501
yhhG SBO_3478 conserved hypothetical proteinRecName: Full=Nickel-responsive regulator; chromosome CDS3467965 402 + 0.564677
yhhY SBO_3438 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3430627 489 + 0.517382
yhiE SBO_3511 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3503932 528 + 0.325758
yhiW SBO_3514 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS3509456 729 - 0.41701
yhiX SBO_3515 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS3510552 825 - 0.409697
yhjB SBO_3519 putative regulatorSubName: Full=Putative regulator; chromosome CDS3516858 603 - 0.484245
yhjC SBO_3520 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS3517908 972 + 0.521605
yiaC SBO_3552 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3560526 441 + 0.514739
yiaG SBO_3557 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3566351 291 + 0.439863
yiaJ SBO_3582 putative regulatorSubName: Full=Putative regulator; chromosome CDS3590697 849 - 0.52179
yidP SBO_3687 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS3702417 717 - 0.51325
yidZ SBO_3664 putative transcriptional regulator LYSR-typeRecName: Full=HTH-type transcriptional regulator YidZ; chromosome CDS3679433 960 - 0.521875
yifDA SBO_3775 Transcription regulatorRecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; chromosome CDS3795336 840 - 0.483333
yihW SBO_3885 putative DEOR-type transcriptional regulatorSubName: Full=Putative DEOR-type transcriptional regulator; chromosome CDS3915982 789 - 0.499366
yiiD SBO_3902 putative acetyltransferaseSubName: Full=Putative acetyltransferase; EC=2.3.1.18; chromosome CDS3928456 990 + 0.549495
yijC SBO_3982 conserved hypothetical proteinRecName: Full=HTH-type transcriptional repressor FabR; chromosome CDS4019644 705 + 0.524823
yijO SBO_3973 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS4006298 852 - 0.525822
yjaB SBO_4032 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4071677 291 - 0.525773
yjaE SBO_4016 putative transcriptional regulatorRecName: Full=Regulator of sigma D; chromosome CDS4054756 477 - 0.492662
yjdC SBO_4320 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4370790 576 + 0.53125
yjdG SBO_4328 putative 2-component transcriptional regulatorRecName: Full=Transcriptional regulatory protein; chromosome CDS4379367 720 - 0.5
yjeB SBO_4278 conserved hypothetical proteinRecName: Full=HTH-type transcriptional repressor NsrR; chromosome CDS4327664 426 - 0.488263
yjfJ SBO_4273 putative alpha helical proteinSubName: Full=Putative alpha helical protein; chromosome CDS4322250 699 - 0.51216
yjfQ SBO_4264 putative DEOR-type transcriptional regulatorRecName: Full=HTH-type transcriptional regulator UlaR; chromosome CDS4315153 756 + 0.505291
yjgJ SBO_4196 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4247683 255 - 0.490196
yjgM SBO_4190 putative acetyltransferaseSubName: Full=Putative acetyltransferase; chromosome CDS4244259 396 - 0.512626
yjiE SBO_4378 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS4431323 912 - 0.508772
yjjM SBO_4417 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4472415 807 - 0.473358
yjjQ SBO_4425 putative regulatorSubName: Full=Putative regulator; chromosome CDS4480957 726 + 0.443526
ykgK SBO_0225 putative regulatorRecName: Full=HTH-type transcriptional regulator EcpR; chromosome CDS237999 591 + 0.394247
yneJ SBO_1644 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1630297 882 + 0.537415
ynfL SBO_1541 putative transcriptional regulator LYSR-typeSubName: Full=Putative transcriptional regulator LYSR-type; chromosome CDS1522588 894 + 0.520134
yphH SBO_2578 putative NAGC-like transcriptional regulatorSubName: Full=Putative NAGC-like transcriptional regulator; chromosome CDS2580068 1200 + 0.511667
yqgE SBO_3042 conserved hypothetical proteinRecName: Full=UPF0301 protein YqgE; chromosome CDS3040033 636 - 0.514151
yqhC SBO_3005 putative ARAC-type regulatory proteinSubName: Full=Putative ARAC-type regulatory protein; chromosome CDS3005224 1128 - 0.501773
yqjI SBO_2930 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2933409 624 + 0.538462
yrbA SBO_3192 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3198318 270 + 0.503704
ytfA SBO_4240 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4295862 327 - 0.422018
ytfH SBO_4232 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4288686 471 - 0.52017