Gene list
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COG category: Transcription
Organism: Escherichia coli W3110, K-12
Number of genes found: 318
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli W3110, K-12 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
aaeR | predicted DNA-binding transcriptional regulator, efflux system | chromosome | CDS | 3389375 | 930 | + | 0.529032 | |
abgR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1406455 | 909 | + | 0.49615 | |
acrR | DNA-binding transcriptional regulator | chromosome | CDS | 484985 | 648 | + | 0.453704 | |
adiY | DNA-binding transcriptional activator | chromosome | CDS | 4341846 | 762 | - | 0.413386 | |
agaR | DNA-binding transcriptional dual regulator | chromosome | CDS | 3277711 | 810 | - | 0.522222 | |
allR | DNA-binding transcriptional regulator | chromosome | CDS | 532235 | 816 | + | 0.525735 | |
alpA | DNA-binding transcriptional activator | chromosome | CDS | 2757300 | 213 | + | 0.469484 | |
alsK | D-allose kinase | chromosome | CDS | 4311449 | 1029 | - | 0.536443 | |
appY | DNA-binding transcriptional activator | chromosome | CDS | 582904 | 750 | + | 0.317333 | |
araC | DNA-binding transcriptional dual regulator | chromosome | CDS | 70387 | 879 | + | 0.525597 | |
arcA | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA | chromosome | CDS | 4644270 | 717 | - | 0.51046 | |
argP | DNA-binding transcriptional activator, replication initiation inhibitor | chromosome | CDS | 3058409 | 894 | + | 0.543624 | |
argR | DNA-binding transcriptional dual regulator, L-arginine-binding | chromosome | CDS | 3384558 | 471 | + | 0.4862 | |
arsR | DNA-binding transcriptional regulator | chromosome | CDS | 3991534 | 354 | - | 0.508475 | |
ascG | DNA-binding transcriptional regulator | chromosome | CDS | 2836910 | 1014 | - | 0.531558 | |
asnC | DNA-binding transcriptional dual regulator | chromosome | CDS | 3709678 | 459 | + | 0.494553 | |
baeR | DNA-binding response regulator in two-component regulatory system with BaeS | chromosome | CDS | 2166413 | 723 | + | 0.540802 | |
basR | DNA-binding response regulator in two-component regulatory system with BasS | chromosome | CDS | 4337960 | 669 | - | 0.532138 | |
betI | DNA-binding transcriptional repressor | chromosome | CDS | 327971 | 588 | - | 0.568027 | |
bglG | transcriptional antiterminator of the bgl operon | chromosome | CDS | 3730114 | 837 | + | 0.428913 | |
bglJ | DNA-binding transcriptional regulator | chromosome | CDS | 4608894 | 624 | + | 0.456731 | |
cadC | DNA-binding transcriptional activator | chromosome | CDS | 4365074 | 1539 | - | 0.419753 | |
cbl | DNA-binding transcriptional activator | chromosome | CDS | 2062101 | 951 | - | 0.48265 | |
cdaR | DNA-binding transcriptional regulator | chromosome | CDS | 182463 | 1158 | + | 0.528497 | |
chbR | DNA-binding transcriptional dual regulator | chromosome | CDS | 1820319 | 843 | - | 0.415184 | |
citB | DNA-binding response regulator in two-component regulatory system with citA | chromosome | CDS | 653085 | 681 | + | 0.50514 | |
cobB | deacetylase of acetyl-CoA synthetase, NAD-dependent | chromosome | CDS | 1181097 | 840 | + | 0.517857 | |
cpxR | DNA-binding response regulator in two-component regulatory system with CpxA | chromosome | CDS | 3531011 | 699 | + | 0.513591 | |
creB | DNA-binding response regulator in two-component regulatory system with CreC | chromosome | CDS | 4640687 | 690 | + | 0.552174 | |
csgD | DNA-binding transcriptional activator in two-component regulatory system | chromosome | CDS | 1102787 | 651 | - | 0.417819 | |
csiR | DNA-binding transcriptional dual regulator | chromosome | CDS | 2794330 | 663 | + | 0.535445 | |
cspA | major cold shock protein | chromosome | CDS | 3920154 | 213 | - | 0.483568 | |
cspB | cold shock protein | chromosome | CDS | 1643053 | 216 | - | 0.351852 | |
cspC | stress protein, member of the CspA-family | chromosome | CDS | 1908940 | 210 | - | 0.466667 | |
cspD | cold shock protein homolog | chromosome | CDS | 922788 | 225 | - | 0.484444 | |
cspE | DNA-binding transcriptional repressor | chromosome | CDS | 657714 | 210 | + | 0.438095 | |
cspF | cold shock protein | chromosome | CDS | 1643569 | 213 | + | 0.483568 | |
cspG | DNA-binding transcriptional regulator | chromosome | CDS | 1051883 | 213 | + | 0.441315 | |
cspH | stress protein, member of the CspA-family | chromosome | CDS | 1051385 | 213 | - | 0.469484 | |
cspI | cold shock protein | chromosome | CDS | 1640169 | 213 | - | 0.403756 | |
cueR | DNA-binding transcriptional activator | chromosome | CDS | 513217 | 408 | + | 0.585784 | |
cusR | DNA-binding response regulator in two-component regulatory system with CusS | chromosome | CDS | 593983 | 684 | - | 0.538012 | |
cynR | DNA-binding transcriptional dual regulator | chromosome | CDS | 357015 | 900 | - | 0.55 | |
cysB | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding | chromosome | CDS | 1335569 | 975 | + | 0.483077 | |
cytR | DNA-binding transcriptional dual regulator | chromosome | CDS | 3512225 | 1026 | + | 0.520468 | |
dbpA | ATP-dependent RNA helicase specific for 23S rRNA | chromosome | CDS | 1411225 | 1374 | + | 0.519651 | |
dcuR | DNA-binding response regulator in two-component regulatory system with DcuS | chromosome | CDS | 4353993 | 720 | - | 0.493056 | |
deaD | ATP-dependent RNA helicase | chromosome | CDS | 3305826 | 1890 | - | 0.555556 | |
deoR | DNA-binding transcriptional repressor | chromosome | CDS | 882398 | 759 | - | 0.507246 | |
dgoR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3765255 | 690 | + | 0.553623 | |
dgsA | DNA-binding transcriptional repressor | chromosome | CDS | 1669058 | 1221 | - | 0.522523 | |
dicA | predicted regulator for DicB | chromosome | CDS | 1649648 | 408 | + | 0.436274 | |
dinG | ATP-dependent DNA helicase | chromosome | CDS | 833492 | 2151 | + | 0.540679 | |
dsdC | DNA-binding transcriptional dual regulator | chromosome | CDS | 2482140 | 936 | - | 0.480769 | |
ebgR | DNA-binding transcriptional repressor | chromosome | CDS | 3220122 | 984 | + | 0.517276 | |
envR | DNA-binding transcriptional regulator | chromosome | CDS | 3412658 | 663 | - | 0.441931 | |
envY | DNA-binding transcriptional activator | chromosome | CDS | 585370 | 762 | - | 0.463255 | |
evgA | DNA-binding response regulator in two-component regulatory system with EvgS | chromosome | CDS | 2489201 | 615 | + | 0.4 | |
exuR | DNA-binding transcriptional repressor | chromosome | CDS | 3245308 | 777 | + | 0.505791 | |
fabR | DNA-binding transcriptional repressor | chromosome | CDS | 3474910 | 705 | - | 0.526241 | |
fadR | DNA-binding transcriptional dual regulator | chromosome | CDS | 1236515 | 720 | + | 0.5125 | |
feaR | DNA-binding transcriptional regulator | chromosome | CDS | 1448092 | 906 | - | 0.485651 | |
fecI | RNA polymerase, sigma 19 factor | chromosome | CDS | 4522394 | 522 | - | 0.545977 | |
fhlA | DNA-binding transcriptional activator | chromosome | CDS | 2852994 | 2079 | + | 0.525734 | |
fimZ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 563071 | 633 | - | 0.366509 | |
fis | global DNA-binding transcriptional dual regulator | chromosome | CDS | 3411126 | 297 | + | 0.47138 | |
flgM | anti-sigma factor for FliA (sigma 28) | chromosome | CDS | 1131412 | 294 | - | 0.527211 | |
fliA | RNA polymerase, sigma 28 (sigma F) factor | chromosome | CDS | 2003207 | 720 | - | 0.541667 | |
frlR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4135633 | 732 | - | 0.509563 | |
fruR | DNA-binding transcriptional dual regulator | chromosome | CDS | 88028 | 1005 | + | 0.549254 | |
fucR | DNA-binding transcriptional activator | chromosome | CDS | 2938024 | 732 | + | 0.48224 | |
gadE | DNA-binding transcriptional activator | chromosome | CDS | 3981522 | 528 | - | 0.329545 | |
gadW | DNA-binding transcriptional activator | chromosome | CDS | 3975797 | 729 | + | 0.418381 | |
gadX | DNA-binding transcriptional dual regulator | chromosome | CDS | 3974605 | 825 | + | 0.409697 | |
galR | DNA-binding transcriptional repressor | chromosome | CDS | 2975255 | 1032 | + | 0.527132 | |
galS | DNA-binding transcriptional repressor | chromosome | CDS | 2243962 | 1041 | - | 0.524496 | |
gcvA | DNA-binding transcriptional dual regulator | chromosome | CDS | 2940306 | 918 | - | 0.491285 | |
glcC | DNA-binding transcriptional dual regulator, glycolate-binding | chromosome | CDS | 3126928 | 765 | + | 0.550327 | |
glpR | DNA-binding transcriptional repressor | chromosome | CDS | 4079810 | 759 | + | 0.546772 | |
gntR | DNA-binding transcriptional repressor | chromosome | CDS | 4061689 | 996 | + | 0.544177 | |
greA | transcription elongation factor | chromosome | CDS | 3328094 | 477 | - | 0.484277 | |
greB | transcription elongation factor | chromosome | CDS | 4103128 | 477 | - | 0.498952 | |
gutM | DNA-binding transcriptional activator | chromosome | CDS | 2827277 | 360 | + | 0.55 | |
hcaR | DNA-binding transcriptional regulator | chromosome | CDS | 2666662 | 891 | - | 0.498316 | |
hdfR | DNA-binding transcriptional regulator | chromosome | CDS | 3688714 | 840 | + | 0.484524 | |
hepA | RNA polymerase-associated helicase protein | chromosome | CDS | 60358 | 2907 | - | 0.54902 | |
hipB | DNA-binding transcriptional regulator | chromosome | CDS | 1593890 | 267 | - | 0.445693 | |
hyfR | DNA-binding transcriptional activator, formate sensing | chromosome | CDS | 2610556 | 2013 | + | 0.52608 | |
hypB | GTP hydrolase involved in nickel liganding into hydrogenases | chromosome | CDS | 2849657 | 873 | + | 0.552119 | |
iclR | DNA-binding transcriptional repressor | chromosome | CDS | 4226394 | 825 | - | 0.541818 | |
idnR | DNA-binding transcriptional repressor, 5-gluconate-binding | chromosome | CDS | 4494821 | 999 | - | 0.47047 | |
ilvY | DNA-binding transcriptional dual regulator | chromosome | CDS | 3678861 | 894 | + | 0.576063 | |
iscR | DNA-binding transcriptional activator | chromosome | CDS | 2660299 | 489 | - | 0.535787 | |
kdgR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1911022 | 792 | - | 0.497475 | |
kdpE | DNA-binding response regulator in two-component regulatory system with KdpD | chromosome | CDS | 721478 | 678 | - | 0.566372 | |
lacI | DNA-binding transcriptional repressor | chromosome | CDS | 365652 | 1083 | - | 0.56325 | |
leuO | DNA-binding transcriptional activator | chromosome | CDS | 84368 | 945 | + | 0.457143 | |
lexA | DNA-binding transcriptional repressor | chromosome | CDS | 4260705 | 609 | + | 0.518883 | |
lldR | DNA-binding transcriptional repressor | chromosome | CDS | 3860585 | 777 | - | 0.540541 | |
lrhA | DNA-binding transcriptional repressor | chromosome | CDS | 2410373 | 939 | - | 0.497338 | |
lrp | DNA-binding transcriptional dual regulator, leucine-binding | chromosome | CDS | 933017 | 495 | + | 0.478788 | |
lysR | DNA-binding transcriptional dual regulator | chromosome | CDS | 2977677 | 936 | + | 0.534188 | |
mak | manno(fructo)kinase | chromosome | CDS | 409368 | 909 | + | 0.556656 | |
malI | DNA-binding transcriptional repressor | chromosome | CDS | 1699866 | 1029 | - | 0.539359 | |
malT | DNA-binding transcriptional activator, maltotriose-ATP-binding | chromosome | CDS | 4084626 | 2706 | - | 0.54102 | |
marA | DNA-binding transcriptional dual regulator | chromosome | CDS | 1621288 | 384 | + | 0.458333 | |
marR | DNA-binding transcriptional repressor | chromosome | CDS | 1620834 | 435 | + | 0.494253 | |
melR | DNA-binding transcriptional dual regulator | chromosome | CDS | 4345398 | 909 | - | 0.50275 | |
metJ | DNA-binding transcriptional repressor, S-adenosylmethionine-binding | chromosome | CDS | 3508286 | 318 | + | 0.518868 | |
metR | DNA-binding transcriptional activator, homocysteine-binding | chromosome | CDS | 3623865 | 954 | + | 0.562893 | |
mfd | transcription-repair coupling factor | chromosome | CDS | 1172095 | 3447 | - | 0.547723 | |
mhpR | DNA-binding transcriptional activator, 3HPP-binding | chromosome | CDS | 366811 | 948 | - | 0.53692 | |
mlrA | DNA-binding transcriptional regulator | chromosome | CDS | 2218200 | 732 | + | 0.528689 | |
mngR | DNA-binding transcriptional dual regulator, fatty-acyl-binding | chromosome | CDS | 765575 | 723 | - | 0.481328 | |
mntR | transcriptional regulator of mntH | chromosome | CDS | 853605 | 468 | + | 0.540598 | |
mprA | DNA-binding transcriptional regulator | chromosome | CDS | 2809426 | 531 | + | 0.491525 | |
mtlR | DNA-binding transcriptional repressor | chromosome | CDS | 3864256 | 588 | - | 0.510204 | |
nac | DNA-binding transcriptional dual regulator | chromosome | CDS | 2063153 | 918 | - | 0.481481 | |
nagC | DNA-binding transcriptional dual regulator | chromosome | CDS | 700796 | 1221 | - | 0.529894 | |
nanK | predicted N-acetylmannosamine kinase | chromosome | CDS | 3369330 | 876 | - | 0.584475 | |
nanR | DNA-binding transcriptional dual regulator | chromosome | CDS | 3373553 | 792 | - | 0.522727 | |
narL | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) | chromosome | CDS | 1276756 | 651 | - | 0.517665 | |
narP | DNA-binding response regulator in two-component regulatory system with NarQ or NarX | chromosome | CDS | 2293834 | 648 | + | 0.524691 | |
nhaR | DNA-binding transcriptional activator | chromosome | CDS | 18715 | 906 | + | 0.474614 | |
nikR | DNA-binding transcriptional regulator, Ni-binding | chromosome | CDS | 4021426 | 402 | - | 0.572139 | |
norR | DNA-binding transcriptional activator | chromosome | CDS | 2829431 | 1515 | - | 0.568317 | |
nusA | transcription termination/antitermination L factor | chromosome | CDS | 3315894 | 1488 | - | 0.527554 | |
nusB | transcription antitermination protein | chromosome | CDS | 434361 | 420 | + | 0.538095 | |
nusG | transcription termination factor | chromosome | CDS | 3458393 | 546 | - | 0.516484 | |
ompR | DNA-binding response regulator in two-component regulatory system with EnvZ | chromosome | CDS | 4103832 | 720 | + | 0.551389 | |
oxyR | DNA-binding transcriptional dual regulator | chromosome | CDS | 3477274 | 918 | - | 0.554466 | |
paaX | DNA-binding transcriptional regulator, aryl-CoA responsive | chromosome | CDS | 1465253 | 951 | + | 0.50368 | |
pdhR | DNA-binding transcriptional dual regulator | chromosome | CDS | 122092 | 765 | + | 0.55817 | |
perR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 268513 | 894 | - | 0.479866 | |
phnF | transcriptional regulator of phosphonate uptake and biodegradation | chromosome | CDS | 4326375 | 726 | - | 0.618457 | |
phnO | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 4319782 | 435 | - | 0.57931 | |
phoB | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) | chromosome | CDS | 416366 | 690 | + | 0.544928 | |
phoP | DNA-binding response regulator in two-component regulatory system with PhoQ | chromosome | CDS | 1191353 | 672 | - | 0.477679 | |
prpR | DNA-binding transcriptional regulator | chromosome | CDS | 346081 | 1587 | - | 0.551985 | |
pspA | regulatory protein for phage-shock-protein operon | chromosome | CDS | 1369793 | 669 | + | 0.493274 | |
pspC | transcriptional activator | chromosome | CDS | 1370739 | 360 | + | 0.502778 | |
pspF | DNA-binding transcriptional activator | chromosome | CDS | 1368649 | 978 | - | 0.517382 | |
purR | DNA-binding transcriptional repressor, hypoxanthine-binding | chromosome | CDS | 1739558 | 1026 | + | 0.538012 | |
puuR | DNA-binding transcriptional repressor | chromosome | CDS | 1363625 | 558 | + | 0.508961 | |
qseB | DNA-binding response regulator in two-component regulatory system with QseC | chromosome | CDS | 3168484 | 660 | + | 0.516667 | |
rbsR | DNA-binding transcriptional repressor | chromosome | CDS | 3697462 | 993 | - | 0.506546 | |
rcsA | DNA-binding transcriptional co-regulator with RcsB | chromosome | CDS | 2026105 | 624 | + | 0.38141 | |
rcsB | DNA-binding response regulator in two-component regulatory system with RcsC and YojN | chromosome | CDS | 2319511 | 651 | + | 0.477727 | |
recG | ATP-dependent DNA helicase | chromosome | CDS | 3813124 | 2082 | - | 0.572046 | |
relA | (p)ppGpp synthetase I/GTP pyrophosphokinase | chromosome | CDS | 2910073 | 2235 | - | 0.537808 | |
rfaH | DNA-binding transcriptional antiterminator | chromosome | CDS | 3611860 | 489 | + | 0.496933 | |
rfaP | kinase that phosphorylates core heptose of lipopolysaccharide | chromosome | CDS | 3834465 | 798 | + | 0.433584 | |
rfaZ | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3840219 | 852 | + | 0.325117 | |
rhaR | DNA-binding transcriptional activator, L-rhamnose-binding | chromosome | CDS | 3537187 | 939 | - | 0.497338 | |
rhaS | DNA-binding transcriptional activator, L-rhamnose-binding | chromosome | CDS | 3538109 | 837 | - | 0.518519 | |
rhlB | ATP-dependent RNA helicase | chromosome | CDS | 3671051 | 1266 | + | 0.525276 | |
rhlE | RNA helicase | chromosome | CDS | 831294 | 1365 | + | 0.567033 | |
rho | transcription termination factor | chromosome | CDS | 3669005 | 1260 | - | 0.503175 | |
rnb | ribonuclease II | chromosome | CDS | 1348692 | 1935 | - | 0.5323 | |
rnc | RNase III | chromosome | CDS | 2702039 | 681 | - | 0.506608 | |
rnk | regulator of nucleoside diphosphate kinase | chromosome | CDS | 642780 | 411 | - | 0.547445 | |
rnr | exoribonuclease R, RNase R | chromosome | CDS | 4411334 | 2442 | + | 0.552826 | |
rob | DNA-binding transcriptional activator | chromosome | CDS | 4639121 | 870 | - | 0.532184 | |
rpiR | DNA-binding transcriptional repressor | chromosome | CDS | 4316779 | 891 | - | 0.474747 | |
rpoA | RNA polymerase, alpha subunit | chromosome | CDS | 4199387 | 990 | + | 0.522222 | |
rpoB | RNA polymerase, beta subunit | chromosome | CDS | 3451408 | 4029 | - | 0.526185 | |
rpoC | RNA polymerase, beta prime subunit | chromosome | CDS | 3447108 | 4224 | - | 0.538352 | |
rpoD | RNA polymerase, sigma 70 (sigma D) factor | chromosome | CDS | 3211703 | 1842 | + | 0.529859 | |
rpoE | RNA polymerase, sigma 24 (sigma E) factor | chromosome | CDS | 2708093 | 576 | - | 0.487847 | |
rpoH | RNA polymerase, sigma 32 (sigma H) factor | chromosome | CDS | 4039632 | 855 | + | 0.54152 | |
rpoN | RNA polymerase, sigma 54 (sigma N) factor | chromosome | CDS | 3344572 | 1434 | + | 0.528591 | |
rpoS | RNA polymerase, sigma S (sigma 38) factor | chromosome | CDS | 2865215 | 876 | - | 0.537671 | |
rpoZ | RNA polymerase, omega subunit | chromosome | CDS | 3818034 | 276 | - | 0.532609 | |
rsd | stationary phase protein, binds sigma 70 RNA polymerase subunit | chromosome | CDS | 3439873 | 477 | + | 0.490566 | |
rstA | DNA-bindng response regulator in two-component regulatory system with RstB | chromosome | CDS | 1683864 | 729 | + | 0.491084 | |
rtcR | sigma 54-dependent transcriptional regulator of rtcBA expression | chromosome | CDS | 4080550 | 1599 | - | 0.557849 | |
sdiA | DNA-binding transcriptional activator | chromosome | CDS | 1998247 | 723 | - | 0.467497 | |
sfsB | DNA-binding transcriptional regulator | chromosome | CDS | 3334764 | 279 | + | 0.501792 | |
sgcR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4530786 | 783 | - | 0.496807 | |
slyA | DNA-binding transcriptional activator | chromosome | CDS | 1722104 | 435 | - | 0.482759 | |
sohA | predicted regulator | chromosome | CDS | 3276857 | 336 | + | 0.47619 | |
soxR | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing | chromosome | CDS | 4281059 | 465 | + | 0.52043 | |
soxS | DNA-binding transcriptional dual regulator | chromosome | CDS | 4280650 | 324 | - | 0.509259 | |
spoT | bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | chromosome | CDS | 3815907 | 2109 | - | 0.537221 | |
srlR | DNA-bindng transcriptional repressor | chromosome | CDS | 2827703 | 774 | + | 0.488372 | |
srmB | ATP-dependent RNA helicase | chromosome | CDS | 2711552 | 1335 | + | 0.547566 | |
tdcA | DNA-binding transcriptional activator | chromosome | CDS | 3265982 | 939 | - | 0.421725 | |
torR | DNA-binding response regulator in two-component regulatory system with TorS | chromosome | CDS | 1057684 | 693 | - | 0.52381 | |
treR | DNA-binding transcriptional repressor | chromosome | CDS | 4470979 | 948 | - | 0.537975 | |
trpR | DNA-binding transcriptional repressor, tryptophan-binding | chromosome | CDS | 4637440 | 327 | + | 0.541284 | |
ttk | division inhibitor | chromosome | CDS | 3825325 | 597 | - | 0.530988 | |
tyrR | DNA-binding transcriptional dual regulator, tyrosine-binding | chromosome | CDS | 1388434 | 1542 | + | 0.521401 | |
uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB | chromosome | CDS | 3789689 | 591 | + | 0.588832 | |
uidR | DNA-binding transcriptional repressor | chromosome | CDS | 1698176 | 591 | - | 0.509306 | |
ulaR | DNA-binding transriptional dual regulator | chromosome | CDS | 4422378 | 756 | - | 0.506614 | |
umuD | DNA polymerase V, subunit D | chromosome | CDS | 1232344 | 420 | + | 0.480952 | |
uvrY | DNA-binding response regulator in two-component regulatory system with BarA | chromosome | CDS | 1996840 | 657 | - | 0.497717 | |
uxuR | DNA-binding transcriptional repressor | chromosome | CDS | 4559256 | 774 | + | 0.536176 | |
xapR | DNA-binding transcriptional activator | chromosome | CDS | 2527039 | 885 | - | 0.505085 | |
xylR | DNA-binding transcriptional activator, xylose-binding | chromosome | CDS | 3904258 | 1179 | - | 0.487701 | |
yafC | predicted DNA-binding transcriptional regulator | chromosome | CDS | 229967 | 915 | - | 0.496175 | |
yafP | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 252709 | 453 | + | 0.432671 | |
yafY | predicted DNA-binding transcriptional regulator | chromosome | CDS | 265334 | 858 | - | 0.536131 | |
yagI | predicted DNA-binding transcriptional regulator | chromosome | CDS | 287628 | 759 | - | 0.632411 | |
yagP | predicted transcriptional regulator | chromosome | CDS | 296605 | 411 | - | 0.525547 | |
yahA | predicted DNA-binding transcriptional regulator | chromosome | CDS | 331595 | 1089 | + | 0.459137 | |
yahB | predicted DNA-bindng transcriptional regulator | chromosome | CDS | 332725 | 933 | - | 0.493033 | |
yaiV | predicted DNA-binding transcriptional regulator | chromosome | CDS | 393685 | 669 | + | 0.403587 | |
ybaD | conserved hypothetical protein | chromosome | CDS | 432226 | 450 | + | 0.513333 | |
ybaO | predicted DNA-binding transcriptional regulator | chromosome | CDS | 467607 | 459 | + | 0.518519 | |
ybbS | transcriptional activator of the allD operon | chromosome | CDS | 530519 | 927 | - | 0.524272 | |
ybcM | predicted DNA-binding transcriptional regulator | chromosome | CDS | 570677 | 798 | + | 0.362155 | |
ybdM | conserved hypothetical protein | chromosome | CDS | 633970 | 630 | - | 0.468254 | |
ybdO | predicted DNA-binding transcriptional regulator | chromosome | CDS | 635939 | 903 | - | 0.386489 | |
ybeF | predicted DNA-binding transcriptional regulator | chromosome | CDS | 660847 | 954 | - | 0.448637 | |
ybhD | predicted DNA-binding transcriptional regulator | chromosome | CDS | 800044 | 1017 | - | 0.445428 | |
ycaN | predicted DNA-binding transcriptional regulator | chromosome | CDS | 949082 | 909 | - | 0.466447 | |
yccR | conserved hypothetical protein | chromosome | CDS | 1021560 | 630 | + | 0.480952 | |
ycdC | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1074664 | 639 | + | 0.513302 | |
ycfQ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1169777 | 633 | - | 0.511848 | |
ycfX | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1180170 | 912 | + | 0.527412 | |
ycgE | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1214905 | 732 | - | 0.487705 | |
yciT | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1345311 | 750 | - | 0.488 | |
ycjW | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1384677 | 999 | - | 0.454454 | |
ycjZ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1393705 | 900 | + | 0.465556 | |
ydcI | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1495862 | 924 | - | 0.505411 | |
ydcN | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1507886 | 537 | + | 0.493482 | |
ydcR | fused predicted DNA-binding transcriptional regulator and predicted amino transferase | chromosome | CDS | 1511717 | 1407 | + | 0.513859 | |
ydeO | predicted DNA-binding transcriptional acfivator | chromosome | CDS | 1584640 | 762 | - | 0.395013 | |
ydeW | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1602002 | 954 | - | 0.507338 | |
ydfH | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1630066 | 687 | + | 0.500728 | |
ydhB | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1740580 | 933 | - | 0.536977 | |
ydhM | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1727821 | 516 | + | 0.51938 | |
ydiP | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1780104 | 912 | - | 0.419956 | |
ydiZ | hypothetical protein | chromosome | CDS | 1809114 | 291 | + | 0.43299 | |
ydjF | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1855810 | 759 | - | 0.422925 | |
yeaM | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1876469 | 822 | - | 0.498783 | |
yeaT | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1882600 | 924 | - | 0.52381 | |
yebK | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1938366 | 870 | + | 0.489655 | |
yedL | predicted acyltransferase | chromosome | CDS | 2012737 | 480 | + | 0.470833 | |
yedW | predicted DNA-binding response regulator in two-component system withYedV | chromosome | CDS | 2040289 | 672 | - | 0.447917 | |
yeeY | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2089466 | 930 | - | 0.504301 | |
yegW | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2185369 | 747 | - | 0.514056 | |
yehT | predicted response regulator in two-component system withYehU | chromosome | CDS | 2215577 | 720 | - | 0.493056 | |
yeiE | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2252071 | 882 | - | 0.537415 | |
yejH | predicted ATP-dependet helicase | chromosome | CDS | 2283966 | 1761 | + | 0.531516 | |
yfaH | conserved hypothetical protein | chromosome | CDS | 2354357 | 207 | + | 0.415459 | |
yfaX | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2366099 | 783 | - | 0.509579 | |
yfeD | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2524259 | 393 | + | 0.46056 | |
yfeG | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2559576 | 1053 | - | 0.533713 | |
yfeR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2531376 | 927 | - | 0.539374 | |
yfeT | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2550198 | 858 | - | 0.516317 | |
yfhH | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2697415 | 849 | + | 0.517079 | |
yfiE | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2713095 | 882 | - | 0.496599 | |
yfjR | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2768359 | 702 | + | 0.57265 | |
ygaV | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2795867 | 300 | + | 0.53 | |
ygbI | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2859123 | 798 | - | 0.513784 | |
ygcP | predicted anti-terminator regulatory protein | chromosome | CDS | 2892852 | 576 | + | 0.465278 | |
ygeH | predictedtranscriptional regulator | chromosome | CDS | 2990750 | 1377 | + | 0.347131 | |
ygeK | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2993116 | 444 | - | 0.355856 | |
ygeL | hypothetical protein | chromosome | CDS | 2993593 | 156 | - | 0.365385 | |
ygeV | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3002664 | 1779 | - | 0.45756 | |
ygfI | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3064933 | 897 | - | 0.445931 | |
yggD | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3073342 | 510 | - | 0.480392 | |
ygiP | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3203980 | 933 | - | 0.496249 | |
ygiT | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3166507 | 396 | - | 0.421717 | |
ygjM | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3232384 | 417 | - | 0.484412 | |
yhaJ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3251974 | 897 | - | 0.552954 | |
yhcO | predicted barnase inhibitor | chromosome | CDS | 3385712 | 273 | - | 0.428571 | |
yhhY | predicted acetyltransferase | chromosome | CDS | 4058789 | 489 | - | 0.517382 | |
yhjB | predicted DNA-binding response regulator in two-component regulatory system | chromosome | CDS | 3968521 | 603 | + | 0.477612 | |
yhjC | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3967102 | 972 | - | 0.520576 | |
yiaC | predicted acyltransferase with acyl-CoA N-acyltransferase domain | chromosome | CDS | 3926323 | 441 | - | 0.521542 | |
yiaG | predicted transcriptional regulator | chromosome | CDS | 3920647 | 291 | - | 0.439863 | |
yiaJ | predicted DNA-binding transcriptional repressor | chromosome | CDS | 3897883 | 849 | + | 0.52179 | |
yiaU | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3887449 | 975 | - | 0.476923 | |
yidL | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3779239 | 924 | - | 0.435065 | |
yidP | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3775800 | 717 | - | 0.51325 | |
yidZ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3744293 | 960 | - | 0.521875 | |
yieP | predicted transcriptional regulator | chromosome | CDS | 3695354 | 693 | + | 0.493506 | |
yihL | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3575524 | 711 | - | 0.490858 | |
yihW | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3561227 | 786 | - | 0.524173 | |
yiiD | predicted acetyltransferase | chromosome | CDS | 3558243 | 990 | - | 0.550505 | |
yijO | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3488364 | 852 | + | 0.530516 | |
yjaB | predicted acetyltransferase | chromosome | CDS | 4217270 | 444 | - | 0.545045 | |
yjdC | predicted transcriptional regulator | chromosome | CDS | 4367411 | 576 | - | 0.53125 | |
yjeB | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4410870 | 426 | + | 0.483568 | |
yjfJ | predicted transcriptional regulator effector protein | chromosome | CDS | 4415233 | 699 | + | 0.513591 | |
yjgJ | predicted transcriptional regulator | chromosome | CDS | 4478804 | 594 | + | 0.491582 | |
yjgM | predicted acetyltransferase | chromosome | CDS | 4483714 | 504 | - | 0.519841 | |
yjhI | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4529695 | 789 | - | 0.408112 | |
yjhU | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4524018 | 987 | - | 0.503546 | |
yjiE | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4562058 | 912 | - | 0.513158 | |
yjiR | fused predicted DNA-binding transcriptional regulator and predicted aminotransferase | chromosome | CDS | 4574842 | 1413 | - | 0.550602 | |
yjjM | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4599617 | 915 | - | 0.474317 | |
yjjQ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 4608157 | 726 | + | 0.450413 | |
ykgA | predicted DNA-binding transcriptional regulator | chromosome | CDS | 315674 | 687 | - | 0.430859 | |
ykgD | predicted DNA-binding transcriptional regulator | chromosome | CDS | 319451 | 855 | + | 0.512281 | |
ykgK | predicted regulator | chromosome | CDS | 309970 | 591 | - | 0.390863 | |
ymfK | repressor protein phage e14 | chromosome | CDS | 1203836 | 675 | - | 0.444444 | |
ynaK | conserved hypothetical protein | chromosome | CDS | 1427091 | 264 | + | 0.481061 | |
yncC | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1521976 | 666 | + | 0.436937 | |
yneJ | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1616518 | 882 | + | 0.535147 | |
yneL | predicted transcriptional regulator | chromosome | CDS | 1592071 | 180 | - | 0.466667 | |
ynfL | predicted DNA-binding transcriptional regulator | chromosome | CDS | 1670413 | 894 | - | 0.526846 | |
yoaA | conserved hypothetical protein with nucleoside triphosphate hydrolase domain | chromosome | CDS | 1893039 | 1911 | - | 0.552067 | |
ypdB | predicted response regulator in two-component system withYpdA | chromosome | CDS | 2505829 | 735 | + | 0.47483 | |
ypdC | predicted DNA-binding protein | chromosome | CDS | 2506576 | 858 | + | 0.536131 | |
yphH | predicted DNA-binding transcriptional regulator | chromosome | CDS | 2681519 | 1194 | + | 0.505863 | |
yqeH | conserved hypothetical protein with bipartite regulator domain | chromosome | CDS | 2986192 | 633 | + | 0.374408 | |
yqeI | predicted transcriptional regulator | chromosome | CDS | 2987158 | 810 | + | 0.396296 | |
yqfE | conserved hypothetical protein | chromosome | CDS | 3058037 | 231 | - | 0.549784 | |
yqgE | hypothetical protein | chromosome | CDS | 3091593 | 564 | + | 0.510638 | |
yqhC | predicted DNA-binding transcriptional regulator | chromosome | CDS | 3152918 | 957 | - | 0.504702 | |
yqjI | predicted transcriptional regulator | chromosome | CDS | 3215435 | 624 | + | 0.536859 | |
ytfA | predicted transcriptional regulator | chromosome | CDS | 4432449 | 327 | + | 0.422018 | |
ytfH | predicted transcriptional regulator | chromosome | CDS | 4438793 | 381 | + | 0.56168 | |
zntR | DNA-binding transcriptional activator | chromosome | CDS | 4201286 | 426 | + | 0.488263 |