TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-02 02:53:14

Gene list

Applied filters:

COG category: Transcription
Organism: Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018

Number of genes found: 181

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XOO0025 hypotethical proteinchromosome CDS27062 339 - 0.660767
XOO0040 ATP-dependent RNA helicasechromosome CDS42078 1290 + 0.687597
XOO0149 xylose repressor-like proteinchromosome CDS153161 1158 - 0.663212
XOO0169 transcriptional regulator lacI familychromosome CDS176572 1029 - 0.688047
XOO0230 transcriptional regulator lacI familychromosome CDS255993 1053 - 0.683761
XOO0244 transcriptional regulator asnC familychromosome CDS268548 483 + 0.648033
XOO0283 acetyltransferasechromosome CDS310513 582 - 0.627148
XOO0310 transcriptional regulatorchromosome CDS338195 777 - 0.664093
XOO0349 transcriptional regulatorchromosome CDS377195 201 + 0.58209
XOO0368 transcriptional regulator lysR familychromosome CDS399119 915 + 0.68306
XOO0385 two-component system regulatory proteinchromosome CDS417298 684 + 0.599415
XOO0391 transcriptional regulatorchromosome CDS424988 729 + 0.713306
XOO0411 ECF sigma factorchromosome CDS443137 516 + 0.662791
XOO0412 transmembrane regulator protein prtRchromosome CDS443649 753 + 0.678619
XOO0455 transcriptional regulatorchromosome CDS493897 672 - 0.68006
XOO0471 chromosome partitioning proteinchromosome CDS509772 930 - 0.687097
XOO0498 conserved hypothetical proteinchromosome CDS543043 516 - 0.670543
XOO0512 DNA-binding proteinchromosome CDS558525 273 - 0.619048
XOO0514 transcriptional regulator pbsX familychromosome CDS560459 378 - 0.698413
XOO0559 RNA polymerase sigma-70 factorchromosome CDS610937 1875 + 0.608533
XOO0596 conserved hypothetical proteinchromosome CDS647319 498 + 0.690763
XOO0597 conserved hypothetical proteinchromosome CDS647723 381 + 0.664042
XOO0621 conserved hypothetical proteinchromosome CDS676487 729 - 0.654321
XOO0629 leucine responsive regulatory proteinchromosome CDS682776 480 - 0.63125
XOO0695 conserved hypothetical proteinchromosome CDS748904 399 - 0.66416
XOO0700 ATP-dependent RNA helicasechromosome CDS752189 1383 - 0.689082
XOO0783 putative transcriptional regulatorchromosome CDS850005 729 - 0.647462
XOO0853 transcriptional regulatorchromosome CDS930673 654 - 0.64526
XOO0856 transcriptional regulator lysR familychromosome CDS933118 891 - 0.65881
XOO0869 transcriptional regulatorchromosome CDS950315 894 + 0.61745
XOO0876 conserved hypothetical proteinchromosome CDS960978 525 + 0.638095
XOO0957 3-deoxy-D-manno-octulosonic acid kinasechromosome CDS1048688 750 + 0.656
XOO0999 transcriptional regulatorchromosome CDS1091752 1032 - 0.655039
XOO1003 two-component system regulatory proteinchromosome CDS1096881 702 + 0.643875
XOO1006 transcriptional regulator luxR/uhpA familychromosome CDS1100049 639 + 0.665102
XOO1009 transcriptional regulatorchromosome CDS1102686 903 + 0.625692
XOO1045 RNA polymerase omega subunitchromosome CDS1137080 300 + 0.62
XOO1046 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1137508 2172 + 0.635819
XOO1048 ATP-dependent DNA helicasechromosome CDS1140160 2154 + 0.660631
XOO1083 conserved hypothetical proteinchromosome CDS1182911 699 + 0.65093
XOO1102 two-component system regulatory proteinchromosome CDS1200433 678 - 0.632743
XOO1126 putative transcriptional regulatorchromosome CDS1218410 1659 - 0.649789
XOO1127 putative transcriptional regulatorchromosome CDS1219815 1401 - 0.66738
XOO1147 conserved hypothetical proteinchromosome CDS1252466 774 + 0.662791
XOO1155 transcriptional regulator soxR familychromosome CDS1259196 447 + 0.659955
XOO1167 transcriptional regulator ahyR/asaR familychromosome CDS1275347 765 + 0.618301
XOO1183 RNA polymerase sigma-54 factorchromosome CDS1292299 1440 - 0.663194
XOO1260 transcriptional activator ampR familychromosome CDS1379999 876 - 0.670091
XOO1265 HrpG proteinchromosome CDS1385411 792 - 0.617424
XOO1266 regulatory protein HrpXchromosome CDS1386964 1431 + 0.643606
XOO1284 acetyltransferasechromosome CDS1408857 540 - 0.618519
XOO1289 conserved hypothetical proteinchromosome CDS1414603 459 - 0.64488
XOO1309 transcriptional regulatorchromosome CDS1430299 567 + 0.634921
XOO1373 transcription-repair coupling factorchromosome CDS1499537 3465 - 0.656277
XOO1374 conserved hypothetical proteinchromosome CDS1503404 543 - 0.666667
XOO1389 conserved hypothetical proteinchromosome CDS1516892 588 + 0.620748
XOO1401 major cold shock proteinchromosome CDS1526772 216 + 0.560185
XOO1437 putative RNA polymerase ECF-type sigma factorchromosome CDS1562223 297 - 0.619529
XOO1438 ATP-dependent RNA helicasechromosome CDS1562870 1905 + 0.670341
XOO1447 two-component system regulatory proteinchromosome CDS1576005 690 - 0.637681
XOO1499 putative alternate sigma factorchromosome CDS1642041 744 - 0.669355
XOO1541 acetyltransferasechromosome CDS1698296 528 + 0.638258
XOO1583 phage-related proteinchromosome CDS1731651 438 + 0.570776
XOO1637 ATP:GTP 3'-pyrophosphotranferasechromosome CDS1781194 2184 + 0.671245
XOO1705 transcriptional regulatorchromosome CDS1877559 609 + 0.663383
XOO1745 RNA polymerase sigma-H factorchromosome CDS1929040 621 + 0.619968
XOO1751 ribonuclease IIIchromosome CDS1935528 681 + 0.63583
XOO1765 cold shock proteinchromosome CDS1950235 207 + 0.599034
XOO1817 RNA polymerase sigma factorchromosome CDS2002395 564 - 0.652482
XOO1887 putative transcriptional regulatorchromosome CDS2084849 606 - 0.69802
XOO1888 transcriptional regulator marR familychromosome CDS2085576 441 + 0.664399
XOO1911 heat-inducible transcriptional repressorchromosome CDS2108433 1032 + 0.675388
XOO1919 conserved hypothetical proteinchromosome CDS2119076 606 - 0.669967
XOO1926 conserved hypothetical proteinchromosome CDS2129371 933 - 0.681672
XOO1943 transcriptional regulator gntR familychromosome CDS2145310 363 - 0.584022
XOO1950 transcriptional regulatorchromosome CDS2151356 1170 + 0.645299
XOO1956 transcriptional regulatorchromosome CDS2160453 996 - 0.670683
XOO1959 RNase Rchromosome CDS2165344 2427 + 0.652658
XOO1979 conserved hypothetical proteinchromosome CDS2185357 183 - 0.612022
XOO1994 transcriptional regulatorchromosome CDS2198766 1014 + 0.663708
XOO2031 conserved hypothetical proteinchromosome CDS2246524 1236 - 0.669094
XOO2035 transcriptional regulator lacI familychromosome CDS2250179 1023 + 0.677419
XOO2066 transcriptional regulator lysR familychromosome CDS2288621 891 + 0.656566
XOO2070 transcriptional regulatorchromosome CDS2291741 924 + 0.659091
XOO2075 iron dependent repressorchromosome CDS2298240 468 + 0.67094
XOO2087 conserved hypothetical proteinchromosome CDS2310066 198 + 0.59596
XOO2091 transcription-related proteinchromosome CDS2312434 2361 + 0.645913
XOO2093 two-component system regulatory proteinchromosome CDS2316116 567 - 0.659612
XOO2131 phage-related proteinchromosome CDS2361981 423 - 0.527187
XOO2222 hypothetical proteinchromosome CDS2461488 390 - 0.617949
XOO2225 ECF sigma factorchromosome CDS2464218 501 + 0.634731
XOO2227 transcriptional regulator marR familychromosome CDS2465551 501 - 0.568862
XOO2275 histidine utilization repressorchromosome CDS2531418 705 - 0.660993
XOO2299 conserved hypothetical proteinchromosome CDS2561107 324 + 0.641975
XOO2300 conserved hypothetical proteinchromosome CDS2561443 303 + 0.643564
XOO2354 transcriptional regulator asnC/lrp familychromosome CDS2616120 432 - 0.662037
XOO2394 transcriptional regulator tetR familychromosome CDS2657869 633 + 0.64613
XOO2425 flagellar proteinchromosome CDS2698297 312 - 0.625
XOO2444 response regulatorchromosome CDS2716719 633 + 0.64139
XOO2445 RNA polymerase sigma-54 factorchromosome CDS2717575 1404 + 0.669516
XOO2446 response regulatorchromosome CDS2718987 381 + 0.580052
XOO2480 RNA polymerase sigma factor FliAchromosome CDS2760325 756 + 0.649471
XOO2520 conserved hypothetical proteinchromosome CDS2813059 453 - 0.642384
XOO2561 ATP-dependent RNA helicasechromosome CDS2854398 1377 + 0.67175
XOO2566 major cold shock proteinchromosome CDS2860320 210 - 0.590476
XOO2604 putative repressorchromosome CDS2904647 846 - 0.716312
XOO2640 two-component system regulatory proteinchromosome CDS2952088 987 + 0.656535
XOO2643 transcriptional regulator tetR/acrR familychromosome CDS2959933 660 + 0.657576
XOO2649 transcriptional regulator lacI familychromosome CDS2967733 996 - 0.669679
XOO2719 conserved hypothetical proteinchromosome CDS3066553 249 - 0.626506
XOO2725 response regulatorchromosome CDS3075649 1137 - 0.635004
XOO2728 regulatory proteinchromosome CDS3080027 915 - 0.666667
XOO2738 transcription elongation factor greAchromosome CDS3090997 477 - 0.628931
XOO2745 valine-pyruvate aminotransferasechromosome CDS3099186 1254 - 0.654705
XOO2767 galactose-binding protein regulatorchromosome CDS3118946 972 - 0.653292
XOO2783 transcriptional regulatorchromosome CDS3132665 945 - 0.692064
XOO2794 LexA proteinchromosome CDS3144144 642 - 0.657321
XOO2854 RNA polymerase sigma-E factorchromosome CDS3205708 582 + 0.649485
XOO2873 transcriptional regulator NfxBchromosome CDS3240625 579 + 0.673575
XOO2882 VirG-like two component response regulatorchromosome CDS3252720 780 + 0.652564
XOO2885 transcriptional regulatorchromosome CDS3257058 981 + 0.66157
XOO2929 transcriptional regulator luxR/uhpA familychromosome CDS3313634 648 - 0.604938
XOO2949 hypothetical proteinchromosome CDS3333751 507 - 0.678501
XOO2984 transcriptional regulatorchromosome CDS3385076 717 + 0.617852
XOO3020 conserved hypothetical proteinchromosome CDS3423691 357 - 0.616247
XOO3052 N utilization substance protein Achromosome CDS3463136 1512 - 0.638889
XOO3081 transcriptional regulatorchromosome CDS3495104 969 + 0.679051
XOO3097 Transcription elongation factor greBchromosome CDS3511992 507 + 0.658777
XOO3207 transcriptional regulator lysR familychromosome CDS3636495 984 - 0.666667
XOO3242 LexA repressorchromosome CDS3684946 606 - 0.663366
XOO3249 transcriptional regulator uid familychromosome CDS3689718 630 + 0.639683
XOO3333 two-component system regulatory proteinchromosome CDS3795657 642 - 0.647975
XOO3341 two-component system regulatory proteinchromosome CDS3802182 717 - 0.669456
XOO3363 RNA polymerase alpha subunitchromosome CDS3828479 999 - 0.61962
XOO3393 RNA polymerase beta' subunitchromosome CDS3848502 4218 - 0.627549
XOO3394 RNA polymerase beta subunitchromosome CDS3852870 4152 - 0.617534
XOO3399 transcription antitermination factorchromosome CDS3860147 558 - 0.591398
XOO3432 ECF sigma factorchromosome CDS3890355 678 + 0.688791
XOO3449 oxidative stress transcriptional regulatorchromosome CDS3906689 942 + 0.632696
XOO3450 regulator of nucleoside diphosphate kinasechromosome CDS3908057 432 + 0.673611
XOO3463 two-component system regulatory proteinchromosome CDS3919799 690 + 0.657971
XOO3519 transcriptional regulator marR familychromosome CDS3980383 474 + 0.670886
XOO3523 transcriptional regulatorchromosome CDS3985148 1002 - 0.633733
XOO3552 two-component system regulatory proteinchromosome CDS4012977 747 - 0.639893
XOO3577 transcriptional regulator tetR/acrR familychromosome CDS4044588 636 - 0.669811
XOO3620 two-component system regulatory proteinchromosome CDS4095077 717 - 0.655509
XOO3630 N utilization substance protein B homologchromosome CDS4107419 471 - 0.649682
XOO3636 acetyltransferasechromosome CDS4112748 486 - 0.62963
XOO3637 conserved hypothetical proteinchromosome CDS4113230 525 - 0.617143
XOO3651 two-component system regulatory proteinchromosome CDS4127628 729 + 0.654321
XOO3697 transcriptional regulator lacI familychromosome CDS4176176 1077 - 0.647168
XOO3699 transcriptional regulator gntR familychromosome CDS4178615 768 - 0.657552
XOO3776 conserved hypothetical proteinchromosome CDS4269495 966 - 0.632505
XOO3779 two-component system regulatory proteinchromosome CDS4273315 738 - 0.670732
XOO3826 N-acetyltransferasechromosome CDS4331717 492 - 0.674797
XOO3847 transcriptional regulator marR/emrR familychromosome CDS4351420 489 + 0.658487
XOO3942 conserved hypothetical proteinchromosome CDS4439567 225 - 0.675556
XOO3963 conserved hypothetical proteinchromosome CDS4468470 543 + 0.644567
XOO4019 IcfG proteinchromosome CDS4532630 2007 + 0.659691
XOO4050 RNA polymerase sigma-32 factorchromosome CDS4568194 876 - 0.621005
XOO4052 response regulator proteinchromosome CDS4569990 843 - 0.641756
XOO4055 ATP-dependent RNA helicasechromosome CDS4572550 1725 - 0.681159
XOO4057 conserved hypothetical proteinchromosome CDS4575640 1281 + 0.629196
XOO4079 conserved hypothetical proteinchromosome CDS4603686 432 - 0.645833
XOO4087 transcriptional regulator metE/metH familychromosome CDS4611684 915 + 0.64918
XOO4091 two-component system regulatory proteinchromosome CDS4615107 708 + 0.699153
XOO4096 SIR2-like regulatory proteinchromosome CDS4619800 882 - 0.671202
XOO4097 conserved hypothetical proteinchromosome CDS4621137 183 + 0.650273
XOO4099 transcriptional regulator lysR familychromosome CDS4622958 888 + 0.68018
XOO4105 conserved hypothetical proteinchromosome CDS4630662 426 + 0.610329
XOO4124 transcriptional regulator acrR familychromosome CDS4651697 621 + 0.671498
XOO4161 sal operon transcriptional repressorchromosome CDS4699757 1068 - 0.648876
XOO4188 transcriptional regulator tetR familychromosome CDS4734453 681 + 0.662261
XOO4194 transcriptional regulator marR familychromosome CDS4739938 459 + 0.633987
XOO4200 conserved hypothetical proteinchromosome CDS4745641 249 + 0.586345
XOO4245 transcriptional regulatorchromosome CDS4800329 621 + 0.547504
XOO4279 two-component system regulatory proteinchromosome CDS4837731 669 - 0.654709
XOO4285 conserved hypothetical proteinchromosome CDS4845037 702 - 0.685185
XOO4302 transcriptional regulatorchromosome CDS4859451 1308 + 0.690367
XOO4337 conserved hypothetical proteinchromosome CDS4902739 357 + 0.697479
XOO4356 conserved hypothetical proteinchromosome CDS4919087 576 - 0.663194