Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Brucella melitensis biovar Abortus, 2308

>BAB1_0100 transcriptional regulator, putative
MKPVFLQLQCAPGKTYEVADTLFQREIVSELYSTSGEFDLLAKIYIAENE
DIGKFINENVLDIPNIVRSLTTLTFTAF
>BAB1_1654 Bacterial regulatory proteins, IclR family
MDGDKMMIDAEGSLKLVPAVMRAAQILDQIARATQEGGKRSGEGMKLSEL
ARQTALPKSSVHGLCQTLVHLKLLKLNGDGSFSMGPQSVRWANVFLAQSD
IVEAFHEAVAEAVGLGAYTLTLSHLEGPEVIYLSCRNSSAPLGITFRIGM
RVPAVFTATGKAMLAAMSPRELTQHLPSEWPGPVTPTSVSSLAALEKEMG
EAVIKGYSLDNGQLREGMFCIGAAICDRPFHPVAGIALSMTAAEARPDII
EVMGKRVRALADNVAERMGWAAA
>BAB2_1041 Bacterial regulatory proteins, IclR family
MKPTTQDLEKDSAQVSSALVRGLEILRSFTPHDLSLGNQELIDRTGLPKA
TVSRMTATLVNLSYLDYDEMLGRYRIGPATIALGYSGLSANVVVHIAMPL
MRKLAEKTGVAVAMGLREQQEMVYIANARSENPVSLRLNVGSRLPIWKTA
MGLSYYAGMEESQREALLERMLQCEPEHAERILRLTNHALDDYARDGFVV
SCGDWYSYINAVGVPFRPTDGTQLVAITCGGITDIAPRGVCYGEIGPALK
ELAAELQERLLGNSREAP
>BAB2_0494 Helix-turn-helix protein RpiR:Bacterial regulatory protein LacI, HTH motif:Sugar isomerase (SIS)
MIRKAVCRFELFMSKVADIITRLHVVAQEGSKSDRRLAGLVLADPHYASK
AAISEIAARAGVSEPTVTRFCRALGCDGVRDFKFFLAQALAIGGQYLTAE
IPARDVRESRIATAVTDAAIAAIQRAGDGVDMGVLMKVAERLAAGGPVLC
LGSGDMSSMLATEMENRLFRLGIPVNAQVDGQLQRMYAAVTTHETTVLAF
SVSGFARSVVEAVLVARQYGAETVAITAAGSDLARAADMLIPFQPNEDGN
IYKPTSARYGLLAILDMIATAAAEARGPKVLESLRRIKHILNTLTIDDPR
LPLGD
>BAB2_0468 Bacterial regulatory protein, MarR family
MTDIDYQVLAEWRYRSRRFMSFSATAAEAEGLPPQQHQALLAIKASGPDK
LMTVGTLAERLVVAPHTATELTGRLVAAGLVARVVDLADRRRHTLELTIE
AEHILERLSSVHLAEIRELAPKFIDVLIKLNKMANEPE
>BAB1_1688 Bacterial regulatory proteins, AsnC family:Helix-turn-helix, Fis-type
MTASMDDIDRKILAELQNDGTLSVDSLSERVNLSRNACWRRVKRMEDDGV
IKGRVALVDAEMVGYGLSVFILVRTSAHDPEWLNKFRAAVARFPEIVGAY
RMTGDLDYVLKARISDVRAYDRLYQRLIACVPLSDVSASFVMEEIKDTTA
VPLDGR
>BAB1_1381 Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):Ras GTPase superfamily:HypB/UreG, nucleotide-binding:Urease accessory...
MKKIPRIGVGGPVGSGKTAIIEAVVPILIKLGYRILVITNDIVTTEDAKH
VQRTLKGVLIEDRIVGVETGGCPHTAVREDPSMNLAAVEEMEAKFPDTDL
VLLESGGDNLTLTFSPALIDFFIYVIDVAAGDKIPRKNGPGISQSDILVI
NKTDLAPYVGASLQVMDDDSRMMRGKKPFVFTNCKTNEGIDDLVHLIREN
VLFDTEVSKESA
>BAB2_0757 Bacterial regulatory protein, MarR family
MSNGPEIPFETTLFVRDTCLCLHVQRAARALARLFDEALRPAGLTNGQFS
LMMSLNRPSPPPMKPVAELLAMDQTTLTAALKPLQRRGWVEILVNPADRR
ERLLQLTAEGKAVLASAVPIWTATHAQIEARLAGGNGDALRHDLIMLSS
>BAB1_0744 Helix-turn-helix motif
MSVEREFVDAVRIGDGDAGRVVGQSLRALRQAAGFTQIEMAQRLGVGQAA
ISKIEQRGDVQISSLQRYVEALGASLRIDAAFPVHSNLGVRIQADLGGLV
ADDEQYVLPIFGDGDGARPTKRDLVISIKPNYSGKIFDGVKTIELRRRFP
LSIAAGATAYIYSTSPEMALVGTIKIENVERLQLRLLWKKHGQSASIKKA
DFDDYFSGLEEGFALKLSTPRRFTRPLTLPELKERFGFKAPQSFLYAKPE
LQKALRNEHTNLPD
>BAB2_0725 Bacterial regulatory protein, GntR family:Bacterial regulatory protein, DeoR family
MSGNFGAFLPKNLQGSAPSSGAGPLYVQLRQSLEAAIRAGQLADGEALPP
ERDIAEYANISRVTVRKAVDDLVKAGLLVRRHGSGTFVVRPGERVQQSLS
MLTSFTEDMARRGIATQSRWLERGLYYPSPEEMMKLGLSSETRVARLGRL
RMVGDMPLAIERASLSSEFLPDPDAVQGSLYAELGRTGFRPVRAVQRIAA
CNIKTSDARILGVQEGDAGLSIERLSYLASGRVVEFTKSLYRGDAYDFVA
ELTIPQS
>BAB1_1738 conserved hypothetical protein
MAPDTILRQALERLEKALNTLEEAVDLRLDKEGDFAEAEEEVQRMNADRS
RLAQELDQSEARAERLEAANREVSRRLVTAMETIRAVLDR
>BAB1_0437 conserved hypothetical protein
MKNQHLSDPITMRIPRDLLAEIEEIASLTERSRSWVIVRAMKAYLAAEGR
EIRDIAKARCAIENGEGIDLDTVIEEAEAIIKGAAA
>BAB2_0250 Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator
MAQKIKLSTIADALGVSTATVSLALRDSPLVADQTREKIKEHARAIGYIY
NRRAASLRTSRSGIVGVVVRDIMNPFFAEILKSIETELDRSRQTFILSNH
YDQLDKQRTFMDTLLQLGADGVIMSPAIGTPAEDIQLAEDNGLPVVLIAR
SVEGVHAPVFRGDNAYGIGLATNHLISLGHTRIAMIGGTDQTSTGRDRYR
GYVQAMEKAGLEVRPDWRIPGSRTKQGGFEVAPQFLALKDKPTAAVCWND
LTAIGLMNGIARAGLVPGEDISVTGYDDLEEAAIATPALTTVWNGQREVG
RRAARALLDQLNGVEVSSTQELIRPELHIRQSTSKPKHA
>BAB1_1072 ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop)
MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVV
IIKWNYVRQVALARRFKADRECAVPLKEIELTKENTGGFAALGITGVLLK
GVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKII
GLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSK
LSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMG
FINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHL
ERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGIS
HVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKLRAVERVT
RSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHRRPAQKAG
EQHRAGAHASAGEAAPKPKRPFRSNGGQRAA
>BAB1_0800 Bacterial regulatory protein, MerR family
MMDKSPDAFRTISEVAEDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRP
LDVELLKGIRHLLYDQGYTIKGVQRLLRENNAQFIIALGNGDVQAIEAIT
RQKQIAAEKRAAEEAADNEMALPSGIKAPQPARKLFGLLKGEEDGPIGAD
GRRPSKDNRALLQEALFDLLECKRLLDQVR
>BAB1_0121 Lipocalin-related protein and Bos/Can/Equ allergen:ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-termin...
MSLPDTIAPTLSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGK
TVAFGLAMANTILEDELRFGDAGAPLAMIIAPTRELALQARRELEWLYAD
TGARIASCVGGMDIRTERRALERGSHIVVGTPGRLRDHITRNALDMSQLR
AIVLDEADEMLDMGFREDLEFILGEAPEDRRTLMFSATVPKPIAQLAKRF
QNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLLYYDSQNSIIF
CSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPF
SRRRSAERLLHMAKLDAQTVPAPSIAAVQAKTNERILNAEVFNQPVEEEY
QELLKALAERYTPEQIASAFLNREVASYPAAEEVSDAPVHPVGGKKPRSD
RFEKGDRYERGERRERGEPGERFDRNARFDGVWFSVSAGRKHRADPKWLL
PLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSVAERGTGEKSL
VIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGGYSKKRRGE
>BAB1_0449 ATP/GTP-binding site motif A (P-loop):Cold-shock DNA-binding domain
MANGTVKFFNSTKGFGFIQPDDGSSDVFVHISAVERAGLHSLVEGQKVGY
EVVADRRSGKSAAANLESL
>BAB2_0849 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MFTVRQIRYFDALASTLHFRKAAELAHVSQPALSAQIAEMEAIAGAPLFE
RSQRQVIMTELGKHLYPGIKAILRELQKLEEIAAQSRGLLQTGIKLGIIP
TVAPYLVPVLIPLLHEQHPSFRLQLRESVTAKLLEELHAGDLDAIVAALP
IDDEKLSHQKLFDDRFLIATSTNDHTVLASPMTQNHAALERLLLLEEGHC
MRDQALAVCTLPSQRQLVKYGATSMSTLLQMVSHGMGLTLIPEIAVRAEA
RSNHMRIVPFEGEQPKREIALFWRRQSMRGKDFRALAECIAESANKLKID
PSKIDTLLDNPSTPSYS
>BAB2_0806 Bacterial regulatory protein, LuxR family:Response regulator receiver
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECL
AHGLTNNSVDMTIATFSSYEQWQHQRRNRKAAVVLFNVGGQKVSDPAVGN
YLKNLVADCAPAPVILLADKEEISQVVRALEHGVKGYIPTSVNVHVCVEA
LRLAMAGGTFVPASSVLALRHATEAGGQRIQPLGGMFTQRQAEVVNALRR
GKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACIINELFPSETA
FSDLQ
>BAB2_0465 Bacterial regulatory proteins, AsnC family
MPMKLDEIDKKILRALQRNGRIANNDLAREVGLSPSPCLRRVKLLEEAGV
IDRYVAVLNPAKIGKGLTFFTRIRLDQQDEETLQKFANEIMRLPQVLECY
FMLGDYDAMIRGVATDIEDYRRFQSEYLSRIKGVQNLKTDVPSQIVKQIS
EMPL
>BAB1_1855 GCN5-related N-acetyltransferase
MNDICTIARDKVVVRALEKADLQRYRAIRLNALQRAPMSFGSTFEEENAY
SDTIFARRLEKVDGNAIFGAFHGEELLGIAGHHRHERRTERHRGTLASVY
VEPQARGLKLGEALVQKVIDHAARHVVVLDARVVATNEAAKRIYYALGFK
TCGVERKALLVQGQYLDQELIYIDFSDPAWKDKLG
>BAB2_1054 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family
MNVIKALDALQQEKSDGSPAAEVGEVLSNAVYTTLKSQLMQAQLLPLQRL
KVREVAKVLGTSETPVREALIQLSREGAIEIKPRYYIRVRRLSAAEYEEI
RAIRLELEPMAAERALPHITPDVIDQLEEIHRRLIASEQSANWPEALQTN
FDFHFKLYRLSGMQHLLDMLEALWMRTGPILSELYPHAMPAYAGPHQHEV
VLNALRERDSYALRMAIRMDLIEGGAALIRHLKSATG
>BAB1_1953 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQII
NLEKRLGVGLIERGSRPLKPTLAGQKLIKAAEHLISEAAAIPTQLQGADT
RMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKR
ELDAVISADPFDDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAAR
FPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIVSLVASGVGWS
VLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVI
CRRIIQKSYIPQLAALAPWMVDAIALN
>BAB1_1397 Aminotransferase, class I and II
MLDWENVFATRSKRMRASEIRELLKLLERPDIISFAGGIPDPALFPHDEF
QAAYKDILGGPEANAALQYSISEGYKPLRTWLVGELAKIGIPCTEDNVFI
TSGSQQALDYLGKLFLSPGDTALVTAPTYLGALQAFNAYEPNYDTLALKG
NRTPQSYAQTAQKAGGQVKFAYLSADFSNPTGETVDRAGREKLLAHADEL
DIPVIEDAAYQYLRYNGDAIPPILALDIARKGGDIEKTRTIYCGSFSKTL
APGLRVGYVVASKTVIRKLVLMKQAADLHSSTINQIAIQHVAVHGFDAQV
AKLHGVYKHRRDRMLEALAKYMPEGVHWTKPEGGMFVWVTLPEGMDGASL
LAASIDSEKVAFVPGKAFFADGTGANTLRLSYSCANDEMIDEGIKRLGRL
IRAHTKSAAT
>BAB1_1400 Bacterial regulatory protein TetR, HTH motif
MTDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANC
SKESLYKWFGDRDGLLTAMVRWQASKVRVVPLAREKLDAESLFSSLEHFA
RDWLLVLSGRTSIALNRLAVSHAASGRSALGEIVLSNGPVAMAERLKPIL
TMGKEAGLLIFDDIDEAFRTFFGLVVRDMQIRLLLGDRLKLTDEVVIRDA
RRATKRFFALYGA
>BAB2_0731 conserved hypothetical protein
MGSRWGINRTVGQIYALLYLSPEPLCADEIVEALGVSRSNVSMGIRELQG
WNLVLLKHIPGDRRDFFTTPDDVWQILRTLAEERKKREIDPTLSVLREVL
MEQPQDDSDRYAQDRMKDMYSLIERLTNWYDDVKKLDTDRLTSLLALGAK
VTRFLETTDRIVALGRGRTSAKKEPKRE
>BAB1_1781 DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase
MNQQPAHDLPLTLSGRDVTAVLGPTNTGKTHLAIERMLSHGSGMIGLPLR
LLAREVYNRVAERVGAANVSLVTGEEKIVPPGARYSVCTVEAMPRHTDAA
FVAIDEVQLANDLERGHIFTDRILHLRGRQETLLLGAATMRGILEKLLRG
VNVVTRPRLSHLAYAGSKKMTRLPNRSAIVAFSADEVYAIAELIRRQRGG
AAVVMGALSPRTRNAQVELYQSGDVDFLVATDAIGMGLNLDVDHVAFAQN
RKFDGYQFRDLTPAEVGQIAGRAGRHVRDGTFGVTGQVHPFDEELVERVE
AHNFDPVKVLQWRTSRFDFSSVEALLRSLETPAPIEGLAKALPAVDQQAL
ENLSKDDAIMRLATTPSRIELLWDACALPDYRKIAPAQHADIIATIYQDL
VRRGSVDEDYMSEQVRRADSTEGEIDTLSHRVAQIRTWTFVSHRPGWLAD
PTHWQEKTREIEDRLSDALHERLTKRFVDRRTSVLMRRLRENAMLEAEIS
PAGDVIVEGHNVGQLEGFRFTADVQAEGPDAKAVKTAAQKALAAEFERRA
ERFAAAPNGDFALGSDGVLRWIGATVATLVAGDDVLKPRTVILADEQLTG
PARDKVAAHIDRFVAHHIETVLKPLADLANADALTGMTRGLAFQIVENLG
ILQRRDVAEEVRGLDQDSRAALRRLGVRFGAYHVFMPMLLKPAPAGLITL
LWALKNDGRERAGYGDVVNVLAAGRTSVVVDPAFDPMFYRLAGYRVLGRR
AVRIDILERLADLIRPALAWRPGSGARPDGAYDGGRFIVTPAMMSILGAT
TEDMEEILKSLGYRSEAMEAVAVAAKLAELDAFAAEAGGKDAAAPVEAEK
PAVPPAEPVPAPVVAAEPEAKVEETAAPAIEAAPVAEASAGEAEEPKPVL
LWRQGRFEGRNRNQDQNRQRQNRGNQHRGNQNRGHQNREEGGAARKAEGG
EEQNPRGGNKRFDKHKRQHDGEGKREGAKGEFRGGNQRQPKRDHVYQGNK
RTEQERPVRIDPDSPFAKLLALKEQMKK
>BAB2_1138 Bacterial regulatory protein, GntR family
MNVESDHAPLYAKVEAALAAEIAKGIFPRGSRLPPEDSLIERFGVSRTTV
RKAIENLVMRGLVEIRRGKGTFVAEPKIRQELTELSGFVEDMVALGRKPT
ANLLDKRSVPACEEVAEHLGVAVGTQVYRIERVRLADGVAMSFDETYLPL
DIGEKIASNDLEVEPIFSLLENKYGMPLVEADYQLEAVTADDHVAQALGI
APGSPIFLIERTTYCKGSEPVDYEKLYYRGDLIKFCTRLSRRTR
>BAB1_0636 Response regulator receiver:Transcriptional regulatory protein, C terminal
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVV
DRMLPKRDGLSVVAGLRAKGMETPVLILSALGEVDDRVTGLRAGGDDYLT
KPYAFSELLARVEVLQRRSSPREVDTIYRVGDLELDRLAHTARRQSVDIT
LQPREFRLLEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRS
KIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE
>BAB1_2181 Bacterial regulatory protein, MarR family
MPIELKPLQALTLLRTLSLEQVRGEMPDLTTRQAAILLTIYLEPPPHTVR
GLAAKLNVTKPVITRALDTMGALGLVSRHRDEKDRRNVLIKRTVTGALYV
GKLGDLMIAKARELPL
>BAB1_1803 Bacterial regulatory protein, GntR family
MEQVKAHETSANRPRGLALAGVDGWASESLAEQAYQILERLIVTLELEPG
TLVNERTLIDLTGMGRTPLREAIQRLAWEGLMEVRARSGIAIAPIDPKDF
IKVLDAREGVERVLARDAARFGSPRDYERLEAAAKAMRQAVPTEDVSLFL
DADKAFDIVLGAAASNPYAARIVAPLQSHSRRFWFRLRPSSGIAGSANAH
ATLIEAIISRDPERASDTASELMAYLRTLAP
>BAB2_0478 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, MarR family
MKQAWVEFAPLLASAARGWRKAFDAAMAEHGLSDAKAIPLITLLRHGDCI
PQGVLAERVGIEGATIVRIVDELEKDGLIQRIVDDADRRVKLIQLTEDGR
AVATQVEKSAARLRAQFLGGFDLQEVDVAMEVLRKLNEKF
>BAB1_0321 Bacterial regulatory protein TetR, HTH motif
MRRTKAEAAETREAILLAAEQVFLERGVNQSTLTEIACYAGVTRGAIYFH
FEDKLDIFQSIIGRARFPQEEIMLQAARFDHPNPLHILEQSIVAALELFA
TDERQQVVFTIINQRCEYVGEMAPVIDRLKEMRSDMLALFIGLLKVAERR
GELASEWSAETAAQILLAMVGGFLNEWLHGEKGFDLIIHGSRVISTVIQS
LRAPANIPQ
>BAB2_0161 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MRFDVTDLRLFVSIAETGSITHGAAMVNMALGAASARVRGMEELAGVALL
NRERLGVSITPAGRALLQHGRIVLQQLGRMHSELDEFAHGLKGHVRLFSN
TNALAEFLPVALSSFLMDNPGVNIDLQEHLSDEIVRSVVEGIADIGIVAG
TVDVASLETFPFREDYLVVVVPQGHPFARRRRIAFKDTLDYDFIGLSQGA
ALQNFLSAHAMRMGQRLRLRVQLRSFDSICQMVESRAGIAIVPASAAKRL
RRIMAIRIIALDDAWALRRLTICVRSLQDLPAHAARLVEHLRQT
>BAB1_0370 Bacterial regulatory protein, LuxR family:Response regulator receiver
MTNECKIRVLLVDNHPLVLDGLRAVLETYDDIDIAGAASNARVALEMALA
VNPDVVLMDINMPLLNGIDAIELFKRQLPNVCILMLSMHDSREYISTSIM
RGASGYILKDVSTNEIVTAIHAVASGGTYFSSGVSEALLESGEKKSEGLS
ARENDVLVLVAEGGSNREIAARLGISEATVETHRKNIKKKLGIASTAGLT
RYAIENRLCLSSL
>BAB1_1517 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MVAPLDWDKLRIFHAAAEAGSFTHAAQTLHLSQSAISRQVSALEQDVGVP
LFHRHARGLILTEQGETLYRTAHDVLMKLENVRSKLAESREKPSGRLRVT
TTVGLGSGWLIERIQEFVELYPDVQLQLILDNEELDLTMRHADCAVRLRQ
PQQPDLIQRRLFIVHMHVYASAGYVSKYGKLNSIDEIDQHRIVTFGEPAP
SYLTGLNWLETAGRPDGSARIPALQVNNLLSVRRAVQRGVGIAVLPDYMA
DKESGLVQLLPELEEIPSFDTFFCYPEALKNSAKLHAFRDFLFSKARNWT
Y
>BAB2_1121 Bacterial regulatory protein, MarR family
MQDKTRMQDQPSSKTKTRQDVLLPRNTRRSVPIALLRAREAVMSHFRPML
AQHDITEQQWRVIRILAETDIVDASEMAERAFILAPSLTRIIRSLEERGI
ITKTRDENDGRRVLLQITPAGLAIIKEVAPESRLIYQMIEERFGRERIDQ
LLDMLDDLAAIND
>BAB2_1128 Bacterial regulatory proteins, IclR family
MSTIGKALTLLDVLSRLNTEAGLTEIAQACGYDKATTRRFLVDLEKHGFV
EQLAESRKYRIGAEPLRLARIREARYPFLGTALPFVRQLAERTGETVHLS
EFSNGRLSTIHVEESPRAHRVFINVGMILPFHATASGLAYLAACADDVVE
ATVTKPLDTFTEFTIADPEDVRRRVREARQNGFSVNRQGLEVGVMSTSAA
ILTPGSRPVGCITVAAPLARADDGIVMRYGADAHATAEAISAALFAEHRQ
ARSNQSKRNG
>BAB1_1894 Bacterial regulatory protein, GntR family:Aminotransferase, class I and II
MIPIGLLHSLEAVEAAYTGGEIGRGEQGAPADRMPLVEKVMGIIRGRITA
MSLAPGARLPSIRRLAETMNVSKSTVVEAYDRLVAEGIIQSRRGAGFYVS
ERARQPFSLAATAPHKDRQIDPFWVMRQSLEAESRTLKPGCGWLPDGWLP
QEALRRALRTIARDDQSNLTTYGEPLGFRHLRQHLAHRLGEQGIDIAGGE
ILLTDSGTQAIDLICRYLLQPGDTVLVDDPCYFNFQAVLLTHRVKLVGVP
YTHSGPDLDAFANAATEHAPKLYISNAGLHNPTGGIMTPATAHRLLKLAE
AHGITLVEDNIFGDFHPSPTPLLAELDGFERVLHIGSFSKTLSAAARVGY
IAGRRDWIEGLTDLKLATSFGCNALSPQIVHALLIDGTYRRHIESLRTRL
ADAMTLTANRLKATGLDLWTKPQGGMFLWARLPDGMDSGPVARHALEKGV
VLAPGNVFSPSCTAAGFLRFNVAQSADPYIYAVLREAMKAARS
>BAB2_0857 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MRFNLRALQAFEAVSRHLSVLKAAEELGITSSAVSHQLRILTEDLGYNLI
EREGRNIVLTERGLQFARHLQDAFRHVQLAMVEGRSVQNDRVRIAACSSF
CQGFLIDLVADTIAQESGYEIDMRMYANDPQLASVVADIFVTSDDIPHGY
WATDLFTEQLVAVCTPACRDEELKTRSVPFIKNEALELTGECRWLLYKQE
LPETELPVENRLILRTSHFILALEMANRGLGMALVPDFLARAGLQSGELV
QLYPAVIPSGRKYKICCRSSLRTKPPYSQAIRQIILATSPEARSA
>BAB2_0599 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MIGNRIKFRHLHTFVEVARQKSVVKASEILNISQPAVTKTMRELEEILGV
PVLERDGRGIRITRYGEVFLRHAGTALTALRQGLDSVSQELDGSGPPIRI
GALPTVSTRIMPKAISLFLGEKTGSKVKIVTGENAVLLEQPRFGDLDLVV
GRLAAPEKMTGFSFEHLYSERVRFLVRAGHPLLDDDTIFDHLANYPVLMP
TRNSIIRPFVERLLITNGVGSLPTQIETVSDAFGRAFVRDSDAVWIISEG
VAAHDVAEGKLVALPIDTSETTGPVGLTMRTDMVQTAPLQILVQTIREAA
DH
>BAB2_0020 Sigma-70 region 2
MKALMLLALDGNSAAYRTLLEELSRLLKAYFVRRLFGGRVSEAEDLVQET
LLAIHTRRMTYDREMTFLPWVNAIARHKLVDHLRRQGRHDTDVLDEDIAI
PGEAANVEARMDVDRMLGGVSERTAGLIRKVKIEGQSIDEAARAGDMSQS
AVKVAIHRGLATLAQRFGGKKDDR
>BAB1_0222 Bacterial regulatory protein, MerR family:ATP/GTP-binding site motif A (P-loop)
MNIGQAAAASGISAKMIRHYETIGLIEAADRTSSGYRIYTQKDVETLRFI
RRSRDLGFQVEQIKELLALWRDRNRASADVKKVALGHIEELEAKMRQLQE
MADTLRYLARNCHGDNRPDCPIIHQLAEPGPEARKPPQPRKGELLHGKT
>BAB2_0117 RNA-binding region RNP-1 (RNA recognition motif):Bacterial regulatory protein LacI, HTH motif:Bacterial regulatory protein T...
MKPARNTSRIGDISDDKKGELRSAPDKAELSASCLPETECGRTRLAAGQD
PAKRSQILEGAQSVFLRMGFDAASMNDITREAGVSKGTIYVYFNSKEDLF
VALCEHYRQTLFSSFIGQLEKGFSNRQELIDFGVALTTLITSSIAIRAQR
IVVGVSERKPELAARFYERGPKRSHAIMAQSLQAMIDAGVLEQHDVTRTA
YQLSDLFFAGLYRPRLFGALAEAPSEQAIRDNVESAVDFFFRAYGKK
>BAB1_0190 Bacterial regulatory protein, LuxR family:Autoinducer binding domain
MKWETFYDAMQSADSADQLFEIVKNYAHDLGFEYVSYVMSIPSLNGSLKW
VRFGAFPDGWEQRYLAQNYAEIDPLLRRGVNSIDPLIWSQNFFASAPQIW
ADAVKYGLKVGISQPCWAAQGVFGLLSFVRSGPALTPGEISMLRRQLQMV
TNLLHLSMYERVDVPAISCIGDVSLTLREREILRWTSEGKTAEIIGTILN
ISTRTVNFHISNVLTKLVAVNKVQAVAKARTFGLL
>BAB1_1860 SAM (and some other nucleotide) binding motif:Helix-turn-helix motif
MNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANAL
GIEFGELVGARNDVEVVEADGISVRLIDRQTRPRTVEAFLLDLPANAKRH
ADAHVHGVSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSSGA
EPSRAIVTIIYPEDDTALTSEDQELEWPVGKDEWANVRAQLNRARIEVQN
GYAHSRITFKSAPEPLQSAIRLIEDELATRSGIAETAKVFVTGNRTPAIA
TFYRTTQMRPLPINEQLATPLITNCRELANAAITPWLAKKVDADDLHAKS
QNSTHIIEAALAAEVLTRLGRPTVPTGISQKQVTPKQSPLMDRMFEDRID
VDVYEAYELVHPAYARQVLAVAETLPVFATKSDQTILDVGTGPGLPLQML
LELRPELHVVAIDPSEIANVHLSRRFADDSRVQAVQASIIDYRPADYLFD
AAVSIGASHHLDTKQFLSSIHECLAAEGVLVIADEMLAPFRDRRERNLAL
VTHHLWYILDTLFDLPASSSEAERAVCDILKQGLPPAMSLALSGRSEAAT
RQVRETFKAATDIDLGNALVAREAAFNRFHLLELQALVAGLDYEVEQKTY
PARFVSLAESSGFSLLQHRRIYATQGDGSYDAGTHLFVMVKR
>BAB2_1077 Protein of unknown function UPF0074
MVHLAGVTDGQLVSASEIAEKHHIPRKFLDNIFTELRNAGFVLSRKGKGG
GFCLAHPASEIAIGNIIRALDGALAPIACASKTDYRPCEDCNEAECQVRH
VMLDVREAIANVLDHRTLADSKALDIALLAQ
>BAB2_0220 Bacterial regulatory protein, MerR family
MKIGELAKRSGLAASRIRFYESIGLLKTVDRRSNGYRTYPEEAVLVLHLI
ATAQKAGFSLDEIRTLLPPDLDNWEHDALIEVLRRKVADIEALEARLARS
KLQLLGLISDIEAKPDDMACADNARRVLSRLMAEEMEAPASLQDEGRPHR
RTTI
>BAB2_0283 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MRPFTWDDLQYFLAVARTGQLSTAARQLRTSHVTVLRRIDRLEQALSTKL
FERNPRGYLLTPMGERLVEPAEVMEREAMKFQTEATGNLAALSGVVRLST
LEGFGNFFLADRLPVLAQSYPSLFVEVVTIQQIMSLSRRETELSITLHMP
RNGPYHSEKLMPYRLFIYGHRDYLARHPPIRTREDMTGHPFIGYIDDMVF
TPGLDYMREILPGQRCTYQSSSIHAQLIATQTGYGLCVLPYFIASKYPEL
VPVLPREMHLVREYWMSCHVDVMAAPRIRVISDFMIRAVRESSSMFLGEL
LLQP
>BAB1_0027 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MTLEQLRIFIEVAEREHLTRASEALHLTPSAVSSAIRNLEERYGATLFNR
IGRRIELTGDGRMFLDEARATLARAHSAERMLSELGGGKRGFLAIHASQT
IASYWLPPFLARFHAAFPLIDVRLTLGNTESVTGATQEGAADIGFVEGSV
QVPSLSIAKVATDRLILVTRPDHAWSRSGKLTWDRLFEGNWILREQGSGT
RSVFEDAIRASGYDPARLNVALELPSNEAICSAVRSGHYVTAISELVAAP
HLIAGALVKADFALPQRQFLMLMHNDRYKTKAIEMLSRYIMEDRVDFHY
>BAB1_2018 Bacterial regulatory protein, MerR family
MVSIPIGEASKASGVKVPTIRYYEQIGLLPVPPRTQGNRRLYDARDIQRL
LFIRHARDLGFAVDSIRTLLDLQDKPDQSCAVADAIARARLTEVELRIAR
LQSLKTELLRMLDSTAHGRVDQCRVIEILGNHDECLHPTH
>BAB1_1904 GCN5-related N-acetyltransferase
MTKDHAVDIALLHLRDAHEFAPLLASYAQALKRGAPRRPDDFYAEHLLQD
RAAEALGARVDGNLVGFVIFYDLPEPVTGLRAGQVDHIYVHHDHRGKGIA
KALIDVLADKAEERSWSKLVLNAPRVPEDGRKLYEQIAAAADWSSYVIRF
GN
>BAB1_2078 Helix-turn-helix motif
MTPFGKRLRELREERGVTQKEMAQALRVSPAYLSALEHGRRGQPTWDLLQ
RIITYFNIIWDEAEELQNLAAVSHPRVVIDTSGLSPQATQLANLLAKNIR
FIDRDTIKHLTEEIAAARKRRRGIKV
>BAB1_0506 Protein of unknown function DUF179
MTTHRKPSQEQGFLNGQFLLAMPGMSDERFARSVVYICAHSDEGAMGFII
NQLQPVQFPDLLRQIGVIGEEDLIILPDRAQHMVVRNGGPVDRTRGFVLH
SDDYMVDSTMPVSDDVCLTATVDILRAIYGGGGPERALMALGYSGWAPGQ
LEMEVAENGWLTCDAPLDMLFDSDIEGKYSRLMLHMGIDMSRLVFDAGHA
>BAB1_0527 conserved hypothetical protein
MQQLLTKGKILFGGVIGFFGEDDMDRVLSHGPAPTSVTEAPEQDAMTLEA
VELEFALGAIDVLTEGFDAALAKAAERVGGEVLFNMPALDTSEAQRIGAI
AISGQPQDQVIFVTLRNDGTTLSLALHR
>BAB1_1588 Bacterial regulatory protein, MarR family
MRKIRRAGSISLSELARLSELDRSTMGRNTKVLQRMGLIEHVASDDHRET
NLTLTTEGRNLAERGAPLWNRAQKEIETRLGGDGAEQLLALLRRLDCEQ
>BAB2_0313 Bacterial regulatory proteins, AsnC family
MSTLDGIDRNIIRCLRRDGRMTNSQLAAQVGLSQSACLRRVHILEESGVI
RGYTAIVGSSDGDERLVAIVRITLDRQTEEYLNRFEEAVRRHPEVQECYL
MTGDADYILRVEAENAAAYEIIHKEILSRLPGVARIHSSFAIRTVLLSKA
LSPRS
>BAB2_1113 Helix-turn-helix, AraC type
MDLVHHRNLVPDAWRAISYDQWSSDLRSVCGNFNPQTVERGDDVVGAARR
IDVCGMEFAHVSNDLDCISRGWDDIRRDAQEHLFLIVQLEGSCGLEHGDR
QNILDVGECILVDSTRPTTFYFGGRFSNHLSLHLPRQLMYSDSRIPFDIA
RKLSAHDPMAHMLHALIAKIMATTESDSASQHLRQLMFNATRQAFHSTGE
SAPLHSLHDSASKRLQIVDLLIDRHLTETELSARWLATRLGISIRTLQQD
FQGMGVTCTMVIRDKRLRLAKEKIEQLKEQKSGGTIAEVAYSAGFNDISY
FNRSFKELFDCAPTDLLKGGDC
>BAB2_0235 Bacterial regulatory proteins, IclR family
MDKLHIEPTAKRSRGLERAFEILDYLRVSRAPANPNEIAARIKAPRSTVY
ELVNLLLSNGVLEYCDDEGRVYLGRKLYFLGVAYEDHFNFIRECDRALSK
VAEQTRETAQFCMLDENKYTVVRMHEGARPFRISSDVGQRVPIPWTASGR
LLLSHLNDAEILAFIPPEDFQLPNGQWLAPEVFLREVHAAREARAFTFDS
IVDSFTHCFAVPVENDHGKFCATVCLVAPRDDGIRNHDMYLQSLREAALS
LKGKVSAFQRDQSV
>BAB2_0793 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHR
VPHGAELTAAGAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTAS
SAFNPIVSGAIRHFRAKWPEVELFLTEMNTNLLIERLVRGELDTAFIRPG
LEDPANVRMKRLADEPMLVALPSHHRLAVYERLPLSALAGEPFVLFPRIV
GLSLYDDIAAACRMAGFEMNVTQEAPQMPSVVNLVAANLGVSIVPAAIAQ
IRLDGVTYRPIEGEPLVARLALASMKSLRSPVHDNLISLLPRECI
>BAB1_1106 BRO family, N-terminal
MTEIFNFMDHKVRVVLLKGEPWFVAADVCRCLGIKHTGSAVVSADVHERG
WLAKSSVGNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTV
LPAIRKDGLYVRGEEKVSAGEMDLEELTLITLTRLQEKMKRLKEEKEAAE
ALAKFSQGIITEHLEYITMDE
>BAB2_0136 Helix-turn-helix, AraC type
MKPMYEIIMDPNDRSYELSGSAKLYASGLITIGTTTFNTQSYARTPKIIA
QGGLDFYVLQLLTGGHLLGDFDGTDVAAKPGDIVIIDMAKTLVSRAFKGS
RTTVFIPRAELEEVVGGRNLHGLVLSGTRPITRLLFSYIQELNAVVPDLS
MDEAIAAQKVMLTFLRTGITGLEEDLVGFLPVNLPMKKRILSFIDQNLSD
PLLGPRTIIQNFHVSRSHLYRAFENDGGVAKTIRDKRLDRAFRILAEERN
RTVYSKEVAYRCGFNDPAQFASAFKNRFGMSPRDVQASGATLLSLDVDGF
SFPKYISQEIAKVVPPSS
>BAB1_1775 Sigma-70 factor family:Sigma-70 region 2:Sigma-70 region 4
MKPSSMSSSSTVPANRMPMAVRSFPAAAASSQSMIRSAMSAPYLEREEER
ALAIRWKETKDQDALHRITSAHMRLVISMAGRFRKFKLPMSDLIQEGYVG
LLEAAARFDPDRDVRFSTYASWWIRASMQDYILRNWSIVRGGTSSAQKAL
FFNLRRLRSKLAQTDDNMTKAEIYREISDQLGVSTSDVEFMDSRLSGPDS
SLSAPMNGEETGASRRMDFLVDDHPLQDEIAESSIDMERRNRWLTRALDT
LNERELHIIRERRLDDDGVTLEALGEKLGISKERVRQIESRAMEKLKIAL
LSQHELAAYQA
>BAB1_0572 Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator
MKPTVHDIARTAGVSLATVDRVLNDRPGVRAKTRDRVMAAMNMLGYVRDV
GAANLARGRLYQFDFILPDNENTFMLSLRSELYAASERALAERVRINLRL
VPAFDEAALVAALDESAARKPDGVAFVALDTDPVREGCARLAEKGIHAVT
LVSDLGQSAREHYVGVDNGAAGRTAARLLGLFANGTEGSIAVVAGSLKVR
DHRERFDGFRAAMQADFPDREILPVLEGFDKDPQVEKLVGEMLAKRSDIA
GIYSLGAGNSGLVAALSAHKANHPLVIAHERDEITLKALEDGIIHAILAQ
DAGHEIRSAIRVLKASADRLAIVPGQEYIRIEIFLKDNLPRFN
>BAB1_1110 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MTTLSRRLLPSTSALAAFDAVARHESFSAAADELSLTQGAVSRQVASLEE
QLGAALFDRTSRNVVLSEAGRVYLQAIGPALASIRAASLQVMSQMRGTTL
NLAFLPTFGARWLIPRIPRFVAQYPHIILNFATRIGQFDFDREGLDAAIH
IGQPDWPNAECTFLMDETVAPVCSPAFLKDHPVTSPHDLLRLPLFNMASR
PGAWEHWFRSLGITTPVPGGMRFEQFSNVSQACVAGLGMGSCHFSSSAPR
LRTASLSWPVRIRSKARAAIISWRPKHARKHRP
>BAB1_0136 Response regulator receiver:Helix-turn-helix, Fis-type
MEDLKQEDTEAIGNDPTLLLVDDDKPFLQRLARAMESRGFQVTTAESVEE
GIAAVKTSAPAYAVVDMRLGDGNGLDIIEAIRSRRADTRAIVLTGYGNIA
TAVNAVKLGAIDYLSKPADADEVFAALTRRPGEKVAPPENPMSADRVRWE
HIQRVYEMCERNVSETARRLNMHRRTLQRILAKRAPR
>BAB1_1696 GCN5-related N-acetyltransferase
MVEEMAQPEWRRMHEQDIASVTAVANVVHLDFFEDEAVFRDRFKLYPAGC
FVLARDTEILGYGISYPWKLDTVPALNAVLGELPDDTNTYYIHDIALLPE
ARSSGAATRVVEMMGLQAERDGFVTMSLVAVNGSQGFWEKKGFVVRDLPA
LEEKLKSYSDNALYMVRAG
>BAB2_0336 Bacterial regulatory proteins, AsnC family:Binding-protein-dependent transport systems inner membrane component:Bacterial reg...
MDDLDEKLITLLRHNGRRSISDIAIDLGVSRATVRARMERLERSGDILGY
TVILRSDAVDLPVRGIMMIEIEGHVADRVVKALGGFSEISAIHTTNGRFD
LVVELGAATLTDFDAVLRRIRLVPGIKASETNLLLATPRSTRARL
>BAB1_0578 Bacterial regulatory protein TetR, HTH motif
MPKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYF
GGKDKLILATMRHLLRELGRDLNVAIKQANTPHERIAAIIAVNFSATQFA
QETIAAWLTFYVHAQQSDDIKRLLRIYARRLHSNLVFALEQLTSRARANR
IAEGAGAMIDGLYIRHALGADAPDAASAIALVEDYIAIQLSGQPSAEN
>BAB2_1099 Response regulator receiver:Transcriptional regulatory protein, C terminal
MIVVVDDRDMVTEGYSSWFGREGITTTGFTPTDFDEWVESVPEQDIMAIE
AFLIGECADQHRLPARIRERCKAPVIAVNDRPSLEHTLELFQSGVDDVVR
KPVHVREILARINAIRRRAGASATSGADGTQLGPIRVFSDGRDPQINGID
FPLPRRERRILEYLIANRGRRLNKVQIFSAIYGIFDSEVEENVVESHISK
LRKKLRGQLGFDPIDSKRFLGYCINIE
>BAB1_0900 Conserved hypothetical protein 281
MPEAERRDLMDMEGVGEEEQAGPASPVTLAELARIVEAIVFASSQPVCER
ALAERLPANVDIAPVLNHLQKVYEGRGVHFVKVGSGWAFRTAPDLAFIMN
RETVQQRKLSRAAMEVLAIIAYHQPVTRAELEDIRGVETSKGTLDVLMET
GWIKLRGRRRTPGRPVTYGTTDAFLDHFGLPEIRDLPGLEELRGAGLLSA
RIPSSFAVPIPNIDPDELTEGEDPLEDIDLEGLGLLAPRGE
>BAB2_0785 Helix-turn-helix, AraC type
MERHNITPGFVEDALESVRQRGLDTAPLMAAAGLPQKVREPVTNVQYGRL
WWLIAQTIDDEFFGLAARPMRPGSFDLLCHAVLHAGTLERALRRALQFLN
VVLDDPRGELRIRDGMAHIVLTDAAGHRPAFAYRAYWLILMGVASWLVGR
RIPLRTLDFACPAPVHRQDYHKFFGAPVLFDQPATRLVFSSTYLALPIIR
SDVALENFLREAPANILIRYRHDHDISSRVRAQLNALPAQEWPSFDDLAK
GLRMSAPTLRRRLKAEGQSFGTIKDELRFVIAQKLLQEKKLSIAEVAAEL
GYSEPSAFYRAFQKWVGRSPGQFRVEP
>BAB1_1124 Bacterial regulatory protein, GntR family
MKAKTRRIERNSGVAIWRQIADEIRSDIMAGKLQPGARMPAEIELAEHFG
VNRHTVRNAIAALTQEGVLRAEQGRGTFIANAKRLTNQCTHPSRISQTFA
SQTRETKGILLASDLETASPEIASALELETGQEVVRLETQHSADGHPLSR
ATLWLDAARFPDIAVDYAESGSIAVALRKASIEEYFRKSTIISARHADAD
DRRYLKLSPGAIVLTAQAVKIDTEGRPVQYSLTRFPADRMEFSIETYPIH
DLV
>BAB2_0603 Bacterial regulatory proteins, IclR family
MRETDFVGGFAKGLRVIEALGEDRPRLSIADVSKITGLDRATARRCLLTL
AELGYAEYDGKFFMLLPRILRLGHAYLSGTPLPTIIQPHLDRLSQSVGES
ASASVLDGAEIVYIARASQMRVISINLMAGSRLPAYCASMGRVLLAWLDE
SEARTILEQTELRARTPFTQKDPEKLMEELRRIRAQGFAVNDQELELGLR
SIAVPVFNHRGAVVAALNIGAPVAHVEVSDLVWRILPEMLKIQSELRSML
RQRLFE
>BAB1_1423 conserved hypothetical protein
MVQDLIRYDILAQEALRGVIRKVLAEAAKAGLPGNHHFFITFLTGAPGVR
ISSRLKEKYPEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSA
IRGFYDPSVNFELEFDVAVFQPASDNDEGNISPIEEMAPEKADKPKAKTR
KPAAGKKESASTDSEQEDGEDKAPKPTADVVSLDAFRKK
>BAB2_0378 Bacterial regulatory protein, DeoR family
MPNDSRHARQLVRRQQIAETVMAEGSMRIEDLTERFGISLMTAHRDVDEL
VSRGLFRKSRGIVSAAPTSLIEASDLYRVTRQSEEKKLIAEAAMQFVEPG
QAIFFDDSTTVLQMVPHLPGKGPLTVITNSLILMNEVRDMKDVTLLGLGG
QLYNWCNAFVGGMTIHEIRRLRADVAFISIAAITDDLLFHQSPEMVETKR
AMLDCAARRILLADHTKFERRALHNFGALSDFDVVIVDEKTPFAHIERMQ
AQGINVVVARASEKVDVIPARRR
>BAB1_1941 GCN5-related N-acetyltransferase
MSGRSAMSEGFMVPGLAIVRQLEAVGFRAWPAASVYYDGTWAIRMTAAYP
SRRLNSINPLDPGDTRDIPKRVELAVRRFRAHGRVPCFRVSPLAPPALEA
YLEGLGWKRKHETIVMTADLAAMDLLKAVDRASLEDIGHFVDASLSIHER
PEELRSGFSQLLKSIHSNRGMFVLEEGGRAVSNVLCVQDGAMAGLFDVAT
LRDVRRKGHGRDLVASALKWTAKLGAGMAWLQIEADNVAGLALYERFGFQ
EAYGYAYRENSLK
>BAB1_0783 Bacterial regulatory protein, MarR family
MRNKPPHKTGRELHRGFTKCGSGREAKEMTNTQRKMDASAPFMAPQTALR
SLYLEALQLVERLHRRLLDVVKDEFDRNGRSDINATQALLLFNIGNSELT
AGELRSRGYYLGSNVSYNLKKLVEMGFIHHQRSRVDRRSVRVSLTDKGNE
IANQVASLYERHITSIEQVGGIQVEEFMAMNKSLQRLDRFWNDSIAYRL
>BAB1_1730 Bacterial regulatory protein, GntR family
MNQNVPASRPAPRSETIVARISRILADRIIAGEIEPGTKLRQDHIAEEFQ
TSHVPVREAFRRLEAQGLAVSEPRRGVRVASFDIGEIREVAEMRAALEVL
ALRHAAPHITRAVLDAAEQATLEGDKSRDVRSWEDANRRFHRLILTPCKM
PRLLAAIDDLHAASARFLFATWRSAWEARTDHDHRAILAALRQNDIESAA
TILARHVQWIGHRPVKTASGKVRDSFAIVG
>BAB2_0248 transcriptional regulator, marR family
MSKDNKAVVLYRLQSVARLTRTVLAARLLEQGLYAGQDAVMLQLAAEDGL
TPGILAQRLGVRPPTITKTITRLQG
>BAB1_0057 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MQNENLRDLNAFVAVAETGSFTRAAAQLGVSQSALSQTIRNLEERVGIRL
LNRTTRYVSPTEAGERLLAQVGPALAEIASGFAQIGELRERPSGTVRLSA
DEYAIQSVLWPALERFLAEFPDIHIELTTDYGRSDVVRERQDAGVRRGKL
VSRDMIALRISPDIPMATVATPAFLEKGGKPKRPQDLSDHDCINLRLPTH
GEFFAWTYSRHGKDIRITTQGRLVFTSIAQVLQACFAGFGLAYLPRDYAA
RHIESGALVEVLADWRKTFEGYHLYYPNRRQHPPALAALIEALRYRE
>BAB1_0788 Protein of unknown function DUF193:ATP cone domain
MRCPYCQSEDTQVKDSRPAEDGAVIRRRRVCSVCGGRFTTFERVQLRDLM
VVKKSGRRVPFDRDKLTRSIEVALRKRDVDSERVERAISGIVRQLESAGE
AEVTSDEIGRLAMDALKGIDDIAYIRFASVYRNFSKAVDFHNVIDELTVS
ETGDNLET
>BAB1_1913 Bacterial regulatory protein LysR, HTH motif:Bacterial regulatory protein, ArsR family
MKESPDITRVAALVADPARGAMLIALMDGRALTASELAGRGGITKQTASS
HLAKLVDGEVLVVEAQGRHRYFRLAGPHVAALLEALMVFSSDAAPPVRTG
PRDPALRKSRICYDHLAGEMGVKLFERMQEDQWLADDLTATDQGRDKLSQ
IGINLEDLPLSNRPLCRGCLDWSQRHQHLAGRMGKAILDRLLILSWARRL
PDSRIISFSPEGERRFNAWLG
>BAB1_1076 GCN5-related N-acetyltransferase
MPEKLKARITHLEMTARSPLSVPVPTGLRLAIIQASDMPVHYYRYLYEQV
GRQHHWMLRRVQSDAEVAEAIHAETTEIHVLYADGCPAGFVELELSAKPD
TVEILYFGLIADFQGRGLARFFLNEAISAAWAHSPQKVTIHTNTLDSPRA
LQLYQKMGFVPVAWSEEEVEQWL
>BAB1_1337 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MTAPVQHPLPMLDIDVLRTFVAIADTGSFSSAANAVFRTPSAVSMQIKKL
EEQLGVAVFDRDARSVTLTGDGEILLGYARRLLALNREAVSKFVAPTVTG
IVRLGSPDDIGECVLPLVLKRFAETHPGVTVDVVIDQSSNLRKRLDERRL
DVTLVNISQAVPTRDDVEIMLDEELVWAGAKCGTAYRRDPLPLSIWEEGC
AWRANALQALEKSGRPYRVAYMSSHSTGQRAAILADLAIAPFSKTLLGEG
IVALGPEHGLPPLGRYQLGMVIKQEAGPHIQVVADHLRNVFETYRRTGRF
ETFRSC
>BAB1_1665 Sigma-70 factor family:Sigma-70 region 2:Sigma-70 region 4
MAQMKLPSITSGDGGLTRYLEEIRRFPMLEPQEEYMLAKRYHEHADPKAA
HKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPERGFR
LATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKMKSKIQALD
DGDLNPDQVKQIATKLNVSEDEVVSMNRRLSGDASLNAPLRASEGESGEW
QDWLVDDSNSQEQVLIEQDELESRRSMLEQAMETLNDRERHIFEARRLAE
EPMTLEDLSGEFGISRERVRQIEVRAFEKVQAAVKAAAHKQQKALNHIEE
AHV
>BAB1_1284 Cold-shock DNA-binding domain
MADKSVSDDLFHSQHASEELGELIEVSGHIKWFDVAKGYGFIVPDQPGLT
DILLHVTSLRRDGFQTALEGARIVCEVRHGDRGLQCFRVLSMDASTAIHP
AQMPPQCTHVTVTPSSGLERVIVKWFNRTKGFGFLTRGEGTEDIFIHMET
LRRFGMMELRPGQVVLIRFGTGEKGLMAAEIHPDIGTAIPVSH
>BAB2_0873 conserved hypothetical protein
MSDPFYMNNLCNLDTPKGRAHSYINTYNVERAFRDNYTRYEYSFIEFYAE
PLCDLSRAFKGDMQMVLLLATVAQVALRADMIVENSGGRVQELPPSRRGI
TTYRLADVTGIPRETTRRKLTAMEKMGWLTRENNFWCLAYEGDDAKIHQD
LADVIDRSFRRAARFYVAVTPLVNS
>BAB2_0143 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family:Bacterial regulatory protein, DeoR family
MIPAERQALIVSRLSARGILSIAELAEMLGVSPMTVRRDIHSLEEQGRAL
SVAGGVQLPERIFSEPSHIVKAALYHNEKAAIGQLAAQMIRSGTVIYLDA
GTTTLEIAYRLTDRQDLTVVTNDFVIAAFLSQESNCKLFHTGGEVERENQ
SCVGSAAGEAIRRFNFDLAFISTSSFGARGVSTPSENKIAVKRAVVESAV
RRVLVTDSSKYGLIGTFNAIPLDVLSAVVTDAGLPENARETITQRGVELH
LVEAGTGKVEGKI
>BAB1_2092 Response regulator receiver:Transcriptional regulatory protein, C terminal
MKEASATQTIALVDDDRNILTSVSIALESEGYRVETYTDGASALDGLMAR
PPNLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDDEIDELFGLKMG
ADDFITKPFSQRLLVERVKAVLRRVAARDGTAKPAGQQAKSLERGQLVMD
QERHTCTWKGEPVTLTVTEFLILHSLAQRPGVVKSRDALMDAAYDEQVYV
DDRTIDSHIKRLRKKFKAVDDSFEMIETLYGVGYRFREA
>BAB2_0530 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MLNISVRQLHYFLALVQAGSFSRAAEAIGVTQSTLSAAIQALEAELGATL
IDRTGRRMQMLPAGEDFLARARDIVALIEELPEHARQAEHPLTTRLRMGV
IPSIAPFLLPKVLPATAKAFPELQLTVREGLTRSLLESLRSGTLDVALVA
HPYDLDEFEIAEIGRDPFLLAVRRDHALANRDSVEASDIDDQPFLLLETG
HCLREHVMAAIGSKPAQMSGDVHATSIMTLVQLVQFGMGVTLLPQLAIKA
GVTRGTDLSVVPYEGKYNFRSLVLAWRTNAARRNEFQLFANHLRSNCLQD
V
>BAB2_0310 Helix-turn-helix motif:Cupin domain
MSIDIGGRLRYVRMRQNLSQREFAKRAGVTNSTISLIEANQSNPSVGALK
RILDGIPIGMAEFFALEPDAPHRVFYQAEELVEIGKGPISYRQVGDHLFS
RALQILKERYEPGSDTGKVLLMHEGEEGGIVISGRIEVTVGAERRILGPG
DAYYFSSKLPHRFRCVGPAPCEIVSACTPPSF
>BAB2_0977 Bacterial regulatory protein, GntR family
MSAYEWRSQTRLLDEVAEALRERIYAGDYAPGAILRQEHIATEFGISRTP
LREALRVLERDGLVIHLPGRGGRVASADLTRLIDAYAVREVLDGVAARFA
AERASDADIAKLRAHVAGQDKVVDPWDPKAYTQSNVDFHMAVMNTAGNAS
LIAFVPLLRMTSQVFAPSFSLSVDRARDAIREHAAIVEAIAARDGEEAER
LARAHIRATTARLEAERPHRENDNDARK
>BAB2_0811 Bacterial regulatory protein, GntR family
MKNPIKPLKRAPLLHVSVQESLRAYIEDNGLQAGAPLPPEGELAARLGVS
RNSVREAIKALESVGVLESRRGIGVFVKAFSFEPLLENLAYGLGGALRQI
EEVIAIRRALEIGLIDKTLERIGEDDIKELRDTLEKMRQRAERGEGFPEE
DRHFHQLLFRCQDNEVLLRLIEVFWLAFYKASDFVNLENIDPMATWRDHV
AIVDAIEARDVVAVRKQLDRHYSGINQVIARNRTASLTGRKT
>BAB2_0329 Bacterial regulatory protein LysR, HTH motif:Immunoglobulin/major histocompatibility complex:LysR substrate binding domain
MNLSRRLIPDIATLQAFECAARHGSFTQAAHELNLTQSAVSRQIKDLESQ
LGVLLFERIRQRILLSDAGRKFLPEVRRLLNQTEDTMLRAMASAQSTSSF
SIATLPTFGTRWLMPRIPDFVEKHPGIALNVASRSGVFDFEEQPFDLAIH
YGQPVWAHATCTFLCSEVIVPVASPSLLKTRRPASPEELENEPLLHLATR
PKMWAQWFESCGVEGQSAYRGHRFEQFSMVIGAALAGLGFALLPLYLIEQ
ELRSGELVLLFEKPMRTENEYYLVVPEGKLENPLTQVFCQWIAGQVGNTD
YSSLVHSKPE
>BAB2_0832 Bacterial regulatory protein, GntR family
MTEASGNEWIKPIQRQNLSELAYTTLREALMEGRLKPGEDLPLRPISRSF
GISATPMREALLRLVAEHALEIDARGRISVPHLTRAELLEVRKLRGFLEG
NAAREATLNATPEAVDALEQIHFELITAQDAGDFPTAIGFNTKFHLKMCE
IAGLPVTHELVSNLWVRCGPLISHLYDAGIPANWNPHPHVLIVKAIRARD
PDMAYKELNRDIEGSGAGLLAHVKD
>BAB2_0414 Bacterial regulatory protein, MerR family
MKAKHEGETNGPFFRIGDLAQEFGLTLRALRFYEDKGLLRPRRAGVTRLC
NLNDYARLRLVIFGRRIGFTLGEISELIGLWEQGLADPGQLSALRQSFIA
KLTELEKKKVEIDDTIDELRTVLGRLSSLPG
>BAB1_2006 Response regulator receiver:Transcriptional regulatory protein, C terminal
MTGRTILIVDDDEDLRSILVEQLELCEEFQILQEDSAGKGIQTARNGIVD
LLIMDVGLPDMDGREAVKLLRKGGFKAPIIMLTGHDTESDTILGLESGAN
DYVTKPFKFAVLLARVRAQLRQHEQSEDATFIVGPYTFKPGQKLLIDEKG
SKIRLTEKEAAIIKYLYRAGDKVIGRDVLLEEVWGYNSGVTTHTLETHVY
RLRQKIEKDPSNATLLVTESGGYKLVP
>BAB1_0295 conserved hypothetical protein
MSEIHQVTGSQIAAARALIRMSQADLAAAAGVSVPTLGRMETSEGPASGL
RNNVLAVKRALEAAGVVFMAEGELIAGGAGVRLKSA
>BAB1_1538 Response regulator receiver:Transcriptional regulatory protein, C terminal
MGSKDAMAAEEEKTLSDDAPHLLVVDDDTRIRSLLSQYLTNSGFRVTMAG
SAAEARRKLEGIDFDLLILDVMMPGETGVSLTRSLREQKNVPILMLTALS
ETDSRIDGLAAGADDYLPKPFDPRELTLRINNILRRGAPPAQPKIEQIVF
GPYTFFIPRRELKKGTETIKLTDREQDIMAIFAERAGETIPRHELTGQDG
DVGERTIDVQINRLRRKIEQDPANPVWLQTVRGIGYKLSIE
>BAB2_0423 Bacterial regulatory protein, GntR family
MRGRSAQPALEKQKNVADTESGAATGVKARTLPSRVAGVQRVTTAKLIYH
ELQQQIIRMELLPGTPLNEKALTEKYGVSRTPVREALIRLAEDRLVDVFP
QSGTFVARIPVDAIPEAVVIRQALEGETAERAAANSTAAAIEKLDELIHL
QTFYARKDKPGPFHETDDAFHETIAEIAGYPGIWQHLKPVKMQIDRARRM
TMPILGRMEQVLREHHAIRDAISARDVHAAREAMKHHLSAVLPDIDELRK
SRPDYFA
>BAB2_0368 Bacterial regulatory protein, DeoR family
MKRDDRRQAIINLLIENQAVDLDDLAGRFAVSKMTIHRDLDSLEQSGVLR
KVRGGATIDAGTQFESDFRFRERQDGEAKLKMARAALELVEPGMTVMVND
GSMAALLGGMLREKRPLTVITNNAVIIDELKGENGINLIALGGTYSAKFN
AFFGILTEEALARLSADIAFVSSPAVNGQLVYHMDENVVRTKRAMTNAAA
RSCLLVNHQRFGRPALHVMADLTDFDAIITDASPGTAVLNGLKQAGIKLT
IAAD
>BAB1_0206 Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator
MAATGKRATIHDVARLAGVSIKTVSRVYNDEPNVREAIREKVKQAGAQLR
YRPNVAARNLVERRSHLIGLFFENPSSSYVTELQMGALERLRGTRYRLLI
FPVENRADIRGALIETAHASGLDGIIVTPPMSDDPDILQELTASAMPFAR
VAGDANVHPTDSVTIDDEAAAVDLMNYLLELGHRKIAIVIGDPTHRSAEL
RLEGYRRALREAGIEGNSDYEVQGGFSFASGLVAGRKLLSLPNRPTAIFA
SNDDMAAAVMQVAYDAGIAVPDDLTVVGFDDSAIATMVSPQITTVRQPIF
EMTRDAADMLLRQMESGETSPAQRIDYKLIVRQSSARVPA
>BAB1_1264 RNA polymerase Rpb2, domain 6:RNA polymerase, beta subunit:RNA polymerase Rpb2, domain 7:RNA polymerase Rpb2, domain 2:RNA po...
MAQTHSFNGRKRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPSGGR
PDEGLQAVFKSVFPIQDFSGASMLEFVRYEFDPPKFDVDECRQRDLTYSA
PLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTDNGTFIVNGTE
RVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDSKD
IVYARIDRRRKLPATTLLMALGMDGEEILSTFYKTVTYTRDGDNWRIPYS
AERFKGMKIISDLVDADTGEVVLEAGKKLTARAAKQLAEKGLKAIKATED
DLFGSYLAEDVVNYATGEIYLEAGDEIDEKVLKTLIDTGETEINVLDIDH
VNIGAYIRNTLAVDKNESRQEALFDIYRVMRPGEPPTMDSAEAMFHSLFF
DSERYDLSAVGRVKMNMRLDLDAEDTVRVLRKEDILAVVKMLVELRDGRG
EIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQ
DLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTR
ERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKVVDGKVTNDVVYLSAMEEAKHSVAQANVELDEQGGFVDEFVICRHAG
EVMMAPRENVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAV
PLVRAEAPFVGTGMEPIVARDSGAAIAARRGGIVDQVDATRIVIRATEEL
DPSKSGVDIYRLQKFQRSNQSTCINQRPLVRVGDRIHKGDIIADGPSTDL
GDLALGRNVLVAFMPWNGYNYEDSILLSEKIVSDDVFTSIHIEEFEVAAR
DTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRHGVEK
DERAMAIEREEIERLAKDRDDEQAILDRNVYGRLADMIDGKVAAAGPKGF
KKGTTITRELMTEYPRSQWWQFAVEDEKLQGELEALRSQYDDSKKLLEAR
FMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSR
ILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGMGKKI
GELLDVYRKTANIEPLRQTLEHIYPDNDRNEPVRSYDDDAILMLANQVKR
GVSIATPVFDGAVEADINAMLTDAGLATSGQSTLYDGRTGEPFDRQVTMG
YIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVK
EMRSLGLNVELDDTREAEQPALPDAAE
>BAB1_1338 Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI
MNQNSLVKRSIVFFLVPNFSMIAFATAIEPLRIANRMLGYDAYQWRLTSV
DGKPVTASNGVECAVNASLEDERRYLQREQRPSMVFVCSGVHVEEFRNKS
VFAWLREEYNRGVAVGGLCTGAHILAAAGLLSGRRCAIHWENLPGFSEAF
PKAEVYADLFEVDSNLYTCAGGTASLDMMLKLIGDDFDANLVNKICEQAL
TDRVRSPQDRQRLPLRARLGIQNSKVLTIIEMMEANLSEPQALINVAHTI
GLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLLQSSMPVVEVAVACG
FVSASHFSKCYRELYGRSPQQERAERKILVAA
>BAB2_0290 Bacterial regulatory protein, GntR family
MGLLETAITGRKRHNSHAVVVGELGRGMVAGTIPEGSILPGDHELSLRFG
VSRTVLREAMKTLAAKRLIEPKAKVGTRVLGHASWNFFDPDVLSWRFEAG
FDEPFVDHLAEMRMALEPAAAAAAAERATSDEIVELYALAAKFDNPDHTP
ESIAKVDLEFHLAIARMSGNPFMRSVSGLIEAALAVSFQLSSPAASQEGI
AECAANHLRIAHAIASRDPQKARLAMESVIKLGVKRIRDVI
>BAB1_1209 Helix-turn-helix motif
MAPRKLYIGRKIREIREQHRATQSGFAERLGISTSYLNQSENNQRPVSAA
VLLALAENYQIDIGAISLGDDDRLLSAVSEALADPVFDNYKPSLQEMKLI
TQNAPGLAHALIACHQAYRRNSEQLASLDNQLGRAPSTAEPAPYEEVRDF
FHFIDNYVHELDIAAEKLAADLDIPGRDIGVALPQYMEDRHRVRIARAGA
EEAVLRRFDAHTRVLYLNPYSPATTRNFQIAFQIAELEMESLVTAIARQA
DFRSAEAVEICKIGLRNYFAGALVLPYQTFLAAAKELRHDLELLASRFGA
SLEQVAHRLSTLQRSGQRGVPVFFARVDRAGNITKRHSAAKLQFARYGAA
CPLWNVHQAFETPGRIIRQLAETPDGARYLCIATELTKSEGGFKAPQRRY
AIALGCEVAYAQDFVYADGLDITMRSAFDPIGVSCRICERAECVQRAIPP
LNSRLAVDHDRRGILPYRLL
>BAB1_1114 Bacterial regulatory protein TetR, HTH motif
MLPTKRENSREKILRAATELAQEVGPAHISLDAVAARAGLSKGGLLYSFP
TKAKILEAMVEKYMQEHEQAMAVQETLQSGERNRVARAFLDVYRIQADKE
PPACGVLAALAENPDFMVPVRHYHRALLDRMVSDAVDPDTALIAYLAIAG
MQSGKLLDCDILTDAEQYSVLCRLETMLTSGQCVETKT
>BAB1_1469 SAM (and some other nucleotide) binding motif:Generic methyltransferase:Bacterial regulatory protein, ArsR family
MTGLRLQLDRMVDVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPR
VSRHLKLLAEADLIDRYQEGAWAYFRLADNAISGEVARGLLARLDNADAL
IERDMERLSQVKSSRQEKAAAYFSANAGSWDEIRKLHVSETAVETALRKA
VGEKPFQAMLDVGTGTGRLLELFAPLYLRGVGIDINRDMLAVARANLDLA
AIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAAIREAARALRP
NGRLLVVDFAPHKLEFLREEHAHLRLGFSDEQMLGWMRDAGLEPEKTLEL
EPKAANGEEGLTVKLWLARDPRLLIADPVSHGSQKWQPVLG
>BAB2_1033 Bacterial regulatory protein, GntR family
MMSDIEQPSRENDKGVGPVARDSLTGLVYNNLRQALMEGRFWPGHRFKIR
ELAAAMNVSETPIREALMQLVRARALEMQAGKSIIVAHMTAKQYIELRTV
RLFLEGLAAEHATTRISEADIDRIEVVHEELIRAEQEGRWPDAVRANWQF
HRGLYDASELPEVLAILDDIWMRNGPLLNFHYPDAPPTYPKEHQHLAVLK
YLRQRRPDKVRESIQADMMEGGQNLVRLLEKSGGTRFMPQRAE
>BAB2_0517 Bacterial regulatory proteins, AsnC family
MRKIDSIDDMDQFDRRILEVLSEDGRIPVTELSKRVGLSKTPCQARLKRL
VDEGYILGFRAAIDPEKLGLDHIAFTTVKLSDTREAALEAFNVAVRKIRE
VEECHMIASSFDYLLKVRTPNIRRYREVLGEKISSLPNVASTSTFVVMES
VKDNRPVRVYPGAL
>BAB2_0774 Bacterial regulatory protein TetR, HTH motif
MADSEDKKPPQASLSSEQTRKALIVAALRLFGAKGYEATSTREIASLAKA
NIGSIAYHFGGKEGLRLAAADYIVETFRLIAAQALGNFQPAGFSREERED
ARAQMISALERMVHFIVARPETGEIVQFLLRELAHPTAALDRIYKGVFEP
VHKRLCMIWEAATGEAAESEATRLVVFTLVGQIFYFRIAQEAVKRRMNWP
VMGSDQADMVAGVVKQNLAAMLDARGPTGAQQPVADGGK
>BAB1_0258 conserved hypothetical protein
MNIHASNLDIEKFRKVYALVTGGATDGERVAAQARARKIAERAGMSLNDA
VSQLDSQPKPKPANFFEGFADWMEEKEPGYKAKRAREVVEREQRYASRRA
EILKQFGTAKAFLDPTPNERLILKAAEPFIAELGEPYEDACGTWRRPISS
FAGVHSHFFNLDDVDPEAIMAIKAAIPFPETIRGAFEELKVWDKLNDDRA
HFYGHHEYYYELPVELRIELLREVMRTQPVTSWGDLEARFHYKSYAWQRQ
WIDPKDFDDPEWSRLFDDVRILRALAEKPFREPVQNGRRTNAEKRSAVLS
MLDTNPELSDREICRRVGVSPQTVGNWRRRRNDRLSQP
>BAB1_1777 Transcription factor CarD
MSSQQKKSPVARGGFKAGEAIVYPAHGVGQIVTIEEQEVAGHKLELFVID
FEKDKMRLKVPVAKAASIGMRKLSETDYVERALKVVQGRARVKRTMWSRR
AQEYDAKINSGDLISISEVVRDLYRAENQPEQSYSERQLYEAALDRMARE
IAAVNKLSETEAVRLIEVNLAKGPKRGKAEAELDDDEVEAA
>BAB2_0510 transcriptional regulator, putative
MLRFFHLCAIADYLIRPMIFCQTQFAQNWKRAAGMETAAPMSASVAELIN
ERIDAMPAGERSAAQMLIADYPMLGLKTVAEFSTQAGVSSPTILRFVNRL
GFQSYPDFQARLQDELAAQLQSPHHRNEQPDKRPDAADPGVEHTLENIRE
TFRHLGEKQLHQVVASLSLAKGNVYLIGGRFTDPIAQYMTAHMSIVRARV
FHLGGQESMWRDRLLDMGKRDILVVFDIRRYQESLLALAEKARSRGVEVV
LVTDQWLSPIARVARHVLAGRIAVPSAWDSSAALFVLAETIIREMTRMLE
KDSAARIAELEALR
>BAB2_0635 Ribonuclease II:RNA binding S1:VacB and RNase II family 3'-5' exoribonuclease
MARRFSKSDTGRSARTERRAATAQSKDSAAFLPTREEVLKYIEENPDRAG
KRELAKAFNIKGDARVYLKDLLRELADEGLVEKRARKLSRPGSLPSVAVL
DITGRDEDGGLLARPAEWDEASHGKPPVVLLRRTRLNKTSESGPVVGVGD
RVLAKIFRNEDHAGPDFSARVMKRLEHHANAVLGVVRKLGNGKWRLEPVN
RKQGEVQLDPAMLENAESGDLVEVELLSARRYGLPRGKVRQVVGSIDSEK
ALSMIAIHEHEIPHVFPDEVLREAETAGPATLEGREDWREIPLITIDPAD
AKDHDDAVYAESDTDPENPGGQVVIVAIADVAAYVRPGSALDREAQKRGN
SVYFPDRVVPMLPERISNDLCSLREMEDRPALAVRMIFSADGRKKSHKFH
RIMMRSAAKVAYGQAQAAIDGAPDDKTGPILDTVLKPLWNAYAVLKRGRD
AREPLELDLPEKKILLTPEGKVDKVIVPERLDAHKLIEEFMIQANVSAAE
TLEGRHQPLIFRIHGEPALAKQETLREFLRTLDLNLAKGAQLQPAQFNRI
LAAVDGTDHQELVNQVVLRTQSQAEYSPDNIGHFGLHLRRYAHFTSPIRR
YADLIVHRALIKALGLGTDGLTSAEEAQLEEISALISATERRAMLAERET
VDRLIAHFLASHLGDEYEGRVTGVTRAGLFVNLATYGADGLVPISILGDE
YYLYDEANHAIAGERSGRGFRLGDTVTVRLVEALPVAGALRFEMVSEPHP
LPMSTRSHHKASRAMRGRKGKPAGIPRHKRRGH
>BAB1_1841 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MPAQAKNAMNWDDIRIFLAVARSGQILGAARRLGLNHTTVARRLTALETA
LSTTLLTRRTNGSTLTHAGEEFLLAAERMEAEMLSARAQVGNADIAVSGT
VRIGAPDGFGVNFLAPRLARLTQKYPDLTIQLVPVPRSFSLSRREADIAI
TVERPDQGRLVARRLVDYTLCLYAHRSYLEENGTPKSPEDLNRHRLIGYV
EDLVINPSLAYAPEISRDWKPAFEVSSSLGQVEAVRAGAGIGILHSFIAC
ADPDLVPVLPDRVIHRAYWLAYHESARTLRRVTAVSALISELVESEKSLF
S
>BAB1_0955 ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop)
MTTFAELGLSPKVIAAVEAAGYTAPTPIQAGAIPPALERKDVLGIAQTGT
GKTASFVLPMLTLLEKGRARARMPRTLILEPTRELAAQVEENFVKYGINH
RLNVALLIGGVSFEEQERKLERGADVLIATPGRMLDHFERGKLLLTGVEI
LVIDEADRMLDMGFIPDIERICKLIPFTRQTLFFSATMPPEITKLTEQFL
HSPVRIEVAKASSTAKTVTQRLVKSGKKDWDKRAVLRDLIQSEGDSLKNA
IIFCNRKKDVSELFRSLTRHEFDAGALHGDMDQRARMAMLSSFKDGKLRL
LVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTI
VTSSDTKYLAAIESMIGEKIEWHDGDLSTLAVSEEADEQPRKGRNARGKG
KEKPKEKASNPVAAKTVDPAGQPQPVIENQHRREAIRSSNEERRGKPQTE
QHKRRRDRDDDGPAPVGFGNDIPAFMLIPTGV
>BAB2_0678 Protein of unknown function UPF0074
MRLTRQTNYAIRMLMYCAANDGKLSRIPEIARAYNVSELFLFKILQPLVE
HGLVETVRGRNGGVRLGRASQDISLFDVVRVTEENFSMAECFENDASECP
LVDSCGLNAALREALNAFFAVLMKYSIADLVKARPNVRLLLGLDEMEAPR
IAR
>BAB1_0345 Bacterial regulatory protein, LuxR family:Response regulator receiver
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDL
LLLDLTMPGGTGLSGLVALKALQPALPIIIVSATDDPATIHHALELGASG
FISKSASMETIGEAVGAVLAGDIWTPDDIDLDHPKDPEIESLIARLRTLT
PQQTRVLTMLAEGLLNKQIAFELGVSEATVKAHVSAVLQKLGVDSRTQAV
ILLSRIGSDVLGV
>BAB1_0671 RNA polymerase, omega subunit:RNA polymerase Rpb6
MARVTVEDCVDKVENRFELVLLAGHRARQISQGAPITVDRDNDKNPVVAL
REIADETLSPDDLKEDLIHSLQKHVEVDEPEAAPAQIANAAEEIAEGIAE
AGEEDVVTFDRMSEEELLAGIEGLVAPEKNDGF
>BAB2_0284 Bacterial regulatory proteins, AsnC family:Beta tubulin
MRELDQKDREILAILSKEARIPLKTLAGRIGLSRSATGERVANLEKSGVI
RGYRADIGQIDSNIIRAMILVSLKRTPALGLLDELARHAEVRRVSSVSGQ
LDLIVEVEVPTIDRLNRLRDVLATHETAEDLTTAIVLRRDIERENA
>BAB2_0474 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MGAPLDLDQLQTFVAIADAGSFTRAADAVFKTQSAVSMQMRRLEERIGKP
LFDRDGRTNRLTEDGERLLLYARRMMHLNSETIAAFDDTQLEGHVRIGTP
DDYADRFLPEIMARFARSNPRVELSVVCEPTVNLDEMIRRGTLDIALVTQ
CDDKRRSEVVRTEPLLWVTSTNHAVHEEAMLPLAVGRPTCIWRHAAIDVL
EAARRDYRIIITSWSATVLAAAVLSGLAVSVLPECALRPGMRVLGEADGF
GMLPEIGIGIMRGHSKQNAAVDALAQHIIESLDNISSPQPGGLAGAMSSA
EISPFPAVCTRRVRTNELLPGW
>BAB2_0527 Sugar isomerase (SIS)
MLEVADRLPKRLKQCADYVAANQDRIAVSTVAEMAEGAGVQSSAFMRFCQ
ILGFSGFSEMQRLFRETYAGGWPDYSTRLLHLRETAAGRAPALLAEFAEA
GRTSLEGLLKTIEPEALEKAVELLASANTIHIIGIRRAFPVASYLAYALE
KMAVPAMLHSAVGKLENLHAIHKGDVLLAITFSPYSPETIGMTEAVAARG
IDVIGITDTIVSPMSKVARQTLLVSEVDFGAFRSLSATLCLAIAIAVAVG
TARQAG
>BAB1_1512 Cold-shock DNA-binding domain
MLPDDLLSINSIHRDVCEACGLNSYYVTKDIPMATGTVKWFNTTKGFGFI
QPDQGGADVFVHISAVQRAGLTTLDEGQKVSYEIVQDRRSGRSSADNLVA
A
>BAB2_0322 Bacterial regulatory protein, GntR family
MRDPQLAGPLYRSLARILGELIEEGQLAPAVGLPPERDLAEQLGIGRITV
RKAYKELLTQGFVESRRGSGTFVAERPVRISQHLWRLTSFSQDMISRGKE
PGARVVTNRIDKPSPDEAFRLGIGVDASVVRLDRLRLADGVPMAFERAVV
PRHYLDQDRVDETSLYEALARRGHKPVRALQRLTAVTLDPGTAHLLGVHH
GAPALLIERVSHLEDDRIVEYTRSHYRADAYDFVAELKIGE
>BAB1_0273 conserved hypothetical protein
MAITAEQLRAARALLKMEQRALAEQANVNIQTLKRYEGGSGVLSGNYQYI
EALIAVLTAAGVQFLEDGQVASGPGVALKVG
>BAB2_0762 Response regulator receiver:Transcriptional regulatory protein, C terminal
MKEDAHILIVDDDKDIRDLLHEFLKRRGMHVSIACNGDEMLDVLSRTPID
LVILDVMLPGKSGIEICQDVRRTSRVPIIMLTAIADAADKILGLEIGADD
YIAKPFDPRELLARIRAVLRRFEGNRSPQRALTQIYRFAGWTLDCARRRL
TSPHDVRVELTTAEFNLLEAFVKSSQHILSRDQLMEMAGHQAVYGYDRSV
DILISRLRKKLEDDPCAPKLILTIRGGGYQFGHEVEIA
>BAB2_0096 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MDTLTRMRAFIDVVEAEGFSAAARKIGRSKALLSKYVRELEDELGARLLN
RTTRQFSLTEAGHTYYHRALEIIREIDALQDAVSETSSDARGRIKLSAPR
TFADAVIGQSLIDFCLAHPEIVLDVRLDDRFVDLVEEGFDLAIRITRLQD
SSLIAKRLSPFHSVLCGAPELIARVGKPQRPEDLTDRPCIVDTNARARNN
WHFRNMDGSMMTVPVSGPIEINSPVATKNAALAGLGFCMLPAFIAEDEIE
QGKLITCLDEFIVRDGGIYAVYPHRRYLPAKIRALVDFMTQWFKERE
>BAB2_0432 Helix-turn-helix protein, CopG family
MQRITITIDDDLMAALDRMIEIKGYQNRSEALRDLARTGLQQASLEEGQM
EACVGVLSYTYDHSARDLSKKLTNTHHDHHNISVASMHVHLDHDRCLEVS
ILKGKTDDVRHFADHVKAERHVTHGTLAVLPL
>BAB1_0628 Response regulator receiver:Transcriptional regulatory protein, C terminal:Sugar transporter superfamily
MRILIVEDDKDLNRQLSEAMIAAGYVVDSAYDGEEGHYLGDTEPYDAVVL
DIGLPQMDGISVVERWRRSGRTIPVLMLTARDRWSDKVAGIDAGADDYVA
KPFHIEEVLARLRALIRRAAGHASSEFVCGPLHLDTKTSKASIDGVALKL
TSHEYRLLSYMMHHMDEVVSRTELVEHLYDQDFDRDSNTIEVFVGRLRKK
MGVDLIETVRGMGYRMRSGGEGEAKGSGS
>BAB1_0580 Prokaryotic transcription elongation factor GreA/GreB
MSRAFTKEQDDAPTDLGERPISPHRNLVTSAGLKQIDDELARLQHDLAEA
NIAGERSAVARISRDLRYWMARRETAELSVPAPDSDVVRFGMTVELENLD
DGSTRRWTIVGEDEADPSRGKISHVAPVSILLFGKPVGDVVKINGTEWEI
VSLKVN
>BAB2_0940 Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator
MHISRKKATIYDLSVLSGSSPSTVSAVLNGTWRKRRISQATAEAILQLAD
QHAYTANRQAQGLRHSRSGLVGLLLPLHDNRFFSAMAQIFEAHVRARSFC
PVVVSASRDPEEERETAETLISYAIDELFICGATDPDGLHELCEKAALPH
VNIDLPGSRAPSVTTDNFAGGKMLTAAIIEYFGEEAPLQPEDLCLFGGRN
DESTRQRICGFHQVKQTVLGADPEGCVFKTGYSPANTLVALNDYRARHGR
LPRGLFVNSSINLEGLLRFMAEHPGEPLNDIVIGCYDYDPFASFLPFPVI
SILQDVEGMIAKAFDLMERRVTEPELHLIMPKLIAPRSAITGPLDSLKDI
K
>BAB1_0197 Bacterial regulatory protein, LuxR family
MFEVKEGCLWAAPEKVGKRGRDSARGANALSQKGQSLLLVCKSNLERECI
FNGLVMNGLKLAVICRPFIDHGEVLEDVAAVMIHIGSKRLADPFFSGEMQ
AIIDKWRPVPVVFLAEREEWAQVVRAMEIGARGYIPTSVDTRVCVEAIHL
ATAGGMYVPASMVTKPAAVDIDEDVLGELLTAREVEVVHAIRLGRSNKVI
AYELGMSEGTVKAHVHNIMKKIGAANRTEVACMLHKMYGNMQNEN
>BAB2_0445 Peptidase family S24:Peptidase S24, C-terminal
MFSHESVWAAIDALAERHSLSASGLARRAGLDPTTFNKSKRYAADGRARW
PSTESLAKVMEATGATFDEFTRLIAGVDSLPRHLGEYTQDPHPIPLLGMA
EAGAGGYFDDAGFPAGQGWDIVEFPARTGEGVYALEVSGESMLPLYRDGD
TLIVAPNAAVRRGDRVVVRTRDGEVMAKILHRQTPRTIELHSLNPEHPNR
IFESKDIEWIARILWASQ
>BAB1_2159 Helix-turn-helix motif
MIENKKKPNPIDMHVGSRIRLRRNMLGLSQEKLGENLGITFQQIQKYEKG
TNRVGASRLQAISSILNVPVSFFFEDAPGSGSSGGDGFAEDNEATYVVDF
LNSNEGVQLTRAFTKISDPKVRRKIIDLVKSLAADAE
>BAB2_0022 Bacterial regulatory protein, GntR family
MKEIATRAAGRATGHLPEEIARQIEKRILDGEFSVGSKLPSERELSVEYG
VSRPVVREALSQLKLDGLVEARAGSGVFVIDESNQKAFRIQPLVVEEAQS
LEQLMELLVAIEVAATRIAAVNRTPEDLKQIKRALIGLEYAIISDKLRDE
EDYAFHDAIVIATHNPHFIALCKHLEYGARHVIRQARTNTRSNLKDMLDA
VQDEHKAIYEAIELGDPEQAGIAAERHLRNATQRMKVYLSADNRTN
>BAB2_1152 Helix-turn-helix, AraC type
MQHFEIDGVSFHLDVGSGEARKPLVFMLNIARYSKLRFFSQSDVPLRKVM
ISAPHSWLRNQLDLQDEAQETTLRSFLTQHLASYSFAPGQHILQLAEKIM
NPPSVAAGPLATLNLRAQGLDIMWQACLAMMAEKEKQPPVLSSANRQDCE
RIREFIMANLDRDLTIDLIAQKVAISASTVQRRFKKHYGTTLYNFIKQQR
LEAACVALSRDSIPISQAAHLAGYNNTSTFTSAFRKLYGFSPKKMRALGK
GDPCRSGSG
>BAB2_0222 Response regulator receiver:Transcriptional regulatory protein, C terminal
MRIILIEDDPILGAAVRDHIAAEGHCVDWVSRLDTAHDYMESARYDLVLL
DLMLPDGQGLSFLRDLRTKGCSTPVIILTALDQISDRIQGLNAGADDYLT
KPFDLSELSARLNAVARRYSGNPNPLIEIGGLQIDLAAKSVMRDGRALCL
TAREWALLEAFLQHPGQTLSKAQLEEHLYSFDTEVESNTMEVHVSRLRKK
LGHAIIETVRGIGYRLGNSKSKAAR
>BAB2_0172 Bacterial regulatory protein, GntR family:Bacterial regulatory protein, DeoR family
MADTVFSRIQASRTADDVVHQIESLILEGVLRGGDRLPGERELARQFDIS
RPILRDALKRLETAGLLTSRHGGGTFVADVIGQVFSAPVVKLFADHHKAT
ADYLEYRREIESVAAEYAALRATPADRALLTEIMNAMEKAHGADDFATEA
RLDVELHNAIGEAAHNIVLLHTLRSCYQLLKDGVFYNRSVIYNHPGVADV
FLSQHRAIYDAVMAGNPQAAREAVQKHIRFVEQATHDRALNDERERVARL
RYRQRAGSKELKEIREDESE
>BAB1_1747 Bacterial regulatory protein, DeoR family
MRRADRLFQIVQHLRGGRLVTARQLAERLEVSERTIYRDISDLQSTGVPI
DGEAGVGYILRQGFELPPLMFTRDEIVALVAGARLIRAWGGVSMARGAEE
ALVKIEAVLPKEERARITDTQIHAPKAHISMEERRIIDAVERAVDQGTVL
NIRYRDLESRESQRDIRPLGLWFWGKVWTVIGWCELRNAFRTFRTDRIVE
ASDAGRLFRAERGKTLADFYRLMEMSEYNAFKD
>BAB2_0334 Bacterial regulatory protein, ArsR family
MSDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQ
FERCGLSQSSVSAHLSVLTKAGLIMPHRVGQWTFYKRDEEAIAAAIKALS
AL
>BAB1_1672 Sigma factor, ECF subfamily:Sigma-70 region 2:Sigma-70 region 4
MGRTTGPSVEGAPPFKRELLASLPSLRAFAVSLIGQHDRADDLVQDTIMK
AWAKQESFEVGTNMKAWLFTILRNEFYTQMRKRGREVQDTDGMFSEQLAV
HPSQYGTLDLQDFRAALDQLPDDQREAIILIGASGFAYEEAAEICGCAVG
TIKSRVSRARARLQEILQIEGEADYGPDADSSRATLRSFA
>BAB1_2050 Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator
MSKGSVTVIDIAREAGVSKSTVSLVLRDSPLVHAETRAKVQEAIEKLGYV
YNRSAANLRQAKSKIIGLVVNDLTNSFFAELAVGVDRVMQSAGYVQFLAN
TAESIDRQREVIASMREHGIAGLIVSPARGTEASDLKPLAKSGLPVVQMV
RDVPGSGVSSIVSDNRGGVAKAVEHLVSLGHRAIAFMGGYADIAVFSERL
AGYRTGLEQAGIAFDEALVFTSAPSRAGGVEALEQMLRQGMKPTAAVCFN
DAVAFGVCDGLRATHLEPGQDFGVVGFDDVIEAKTAVPALTTVAVDPQGL
GERAAQLLLKQINSERVEAEAQRLSVRLAVRASCGAPFRKPEEKFEWQSG
AL
>BAB1_1537 Bacterial regulatory protein, MarR family
MNSTSDMNYITNPLTAEEATDLNVIELLFFSYRDFTADPDLILEKIGFGR
AHHRVLYFINRKPGMTVAELLEVLRITKQSLSRVLKQLIDTGHVVQATGQ
HDRRHRKLYPTKSGRQLTLALALPQSRRIARALEDCAQQDRKVIERFLYN
MVNPERRAQIDEFSAAADRVDTKTHPCRQ
>BAB2_1149 ROK family
MSIHLGMVLKILRDEGPQSRAELARRCGLSATTLTHLTAQLLKDGCIAET
DAPVLPSGSPMPGRPPVSVRLVPSAHYVAGVHIGAEAVQVAICDLTAQLV
TSAAFDHAANDNPLKLTHQTADVLRNLVQAKGISLGSLVGIGMGVPGPVD
QVRRRNLLSINTGWRDVAFADAIEAELNIPTVVEHNVTAMALAEAHYGIG
QGCPAVLYVYLGTGLGAGLVVDGMPFRPGGHGAVELGHIQIDPQGALCAC
GNRGCLETFVSERVLRERGAGSAEPLLVALARNPALHDEVAGHFTTALAN
AVNLLTPDLIVLGGHFAEAPEAFYARLRCDLPPRVLPHMRDVLRIERGGF
GNNAGAVGAAAVALDHLFYSGVSR
>BAB1_1422 Beta and gamma crystallin:Bacterial regulatory protein TetR, HTH motif
MKPTDIFDAAPLPDKRTMAGKGSNPPAIKPGQCMKRDFILCSAARVFYRD
GYQGASIDLIASEAGVSRQTIYNHYRDKEALLAAVIDDAIKRMSASLLAV
LATFPQTGENLEKDLVAFAIRMSCNCVYDPSGAFLRKLMQSNDTDMPLAS
NICTTKGPAQAIPAIAACLSRLALAGHLRIDDPHLAARHFLALINADTQY
HTLAGQSIDDSIIEKSAINGVRTFLRAFGTEFARRETLLTQ
>BAB1_0354 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain
MNLRSFQAFAEVVRQGGFSAAARTINATQSTVSKAVKQLEEELQLVLLDR
AVSPPRLTAAGEIVYRRARAMLTEKDDMLAELGELRGLKRGLLRLGLPPI
GSSVLFAPVFAAYTSLYPDIDIQLVEHGSKRLEELLLAGDVELAASLLPV
EESFAWQDVRCEPVVALLPASHPVSDDDSVTLREIANLPFILFESGFALN
HIILSACQRHGFSPNVAVRSSQIDFIVELVAAGIGIGFLPQMIAKQRHHP
GVCIHRVKDADVNWHMAFVWRKGAFLSHAARAWLALCEGASTPAKA
>BAB2_0215 Tumour necrosis factor c/lymphotoxin-beta:Bacterial regulatory proteins, IclR family
MRSRTGSDASRRQERSAEMRKPTMLTPLEAGVEEEDRQFVTALARGLEVL
RCFTPTENTLGNQEIAHKTGLPKPTVSRLTHTLVRLGYLRQDALSGLYQL
DIGILRLGYAMLSNLMIRTVASPLMQVLADYAKAAVAMAARDRLSMVYLD
VVQGEGNMTMRRQIGSTLPLAGSSVGRACLAAMPEDERTFILEHIREREP
ENWPSIRKGLDRALRDFEDYGYCLSIGEWHRDVNSVAVPLVHKQYGVLVF
NCGGPSFQLPREKLEDDIGPRLIEMVHNISSAVP
>BAB1_0672 Amino acid-binding ACT:Metal dependent phosphohydrolase, HD region:TGS domain:RelA/SpoT protein:Metal-dependent phosphohydrol...
MMRQYELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPL
EVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGL
TKLKKLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVM
REDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTD
RLAELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFRKMETK
GLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYISTPKQ
NDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNP
HKISTETNAYAWLRQTIEQLSEGDNPEEFLEHTKLELFQDQVFCFTPKGR
LIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDII
RSKAQVPPAAWESLVATGKARAAIRRATRSAVRKQYSGLGMRILERAFER
AGKPFSKDILKPGLPRLARKDVEDVLAAVGRGELPSADVVKAVYPDYQDT
RVTTQNNPAKAGEKGWFNIQNAAGMIFKVPEGGEGAAAKVDPAATTPKPG
KRALPIRGTNPDLPVRFAPEGAVPGDRIVGILQPGAGITIYPIQSPALTA
YDDQPERWIDVRWDIDDQMSERFPARISVSAINSPGSLAEIAQIAAANDA
NIHNLSMARTAPDFTEMIIDVEVWDLKHLNRIISQLKESASVSSAKRVNG
>BAB1_0919 GCN5-related N-acetyltransferase
MWVRSASEADLEAVHELLVSTWHATFDDLLGRETVNAVTGRWHSPAALKA
NLKKPYSEFIVADNGEGGINGMAFASQTEDGKASLHQLYVRPQIQFTGIG
TMLLSEIEMAFPDVRTMRLEVIERNEKSVRFYERKGYVRVGRKEDWGDPN
CKEPVLVMEKSLENWNM
>BAB2_0173 Bacterial regulatory protein LysR, HTH motif:Helix-turn-helix, Fis-type:LysR substrate binding domain
MMSSLADMEIFARVVATGSMSAAARDLGLSPAVVSKRLGRLEERLGTSLL
QCTTRQIALTEAGQGYHERVLAILANIEEAEAFVARRSADARGTLKISAP
TTFGRMHIAPYLVPFMRANADLTVNMQLSDEMVDIVGDGYDLAIRIGELS
DSTLVARRLAPVRRIFVAAPRYLKERGTPQTIEDLQDHICLAPHNNDPWR
LEGPKGPIVIRPTGPLQTNSSEIVREAVLAGLGIAQRSTWDVGPELAAGK
LVQVLPDYAASRNVAIHAVYPSKQFLPAKVRLFIDYLADLYGPVPYWESG
TFPEEN
>BAB1_1201 Bacterial regulatory protein, MerR family
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRARLFRPSDRHLLK
QIMRGKRLGFSIAEIHEIIQMYRELPGETGQLKLLMKRVEEKRADLRQKR
RDIDETLGELDQVEEACIERLAGLGVST
>BAB2_0777 Bacterial regulatory protein, GntR family
MILLETKMAKENSNSGARWFPVYQGLCEAVVGHSLLPGTKLPEDELASIY
TVSRAVVRSALQALAHDRLVRLEPNRGAFVAEPSPEEAREVFEARSLIEP
EIAALAAKKATPKQIEELRQHLEREHDALQAGHDSDAIRLSALFHSYLAK
IAGHSIFASFVSELLPRSSLIIALYWQRREITCQNDAHHALVNAIEKHDA
HEAAALMKTHILDLLSGLSLNRIKKEQKRLADVLR
>BAB2_0687 Helix-turn-helix, AraC type
MAADDGSQFVERRRWPRVSQAPLGEGLTASPALVPLRFETSSLPTDQQFA
AWQAHMSVLLTTHLPESAQPDDGFSVTQHVWNLDGILIVQQDTSAFHFER
SANEVRFSPIDHWMITIMRSGQSWTGMNGQVVENHPGLVEIRSLGQPFSG
RTLAASSTSLIIPADAFADRGGLPITCNNVALGGHRAQLLIGYLTSVEAS
LGKLAQGDLAGVKANLRELVFDAIAPLVEHIDEKDNVSQIALMTKARRFI
QNNLASPDLTPDALGRELALSRTRLYELFETFGGVANYIRRRRMLAAHAM
LADPADTRKVAEVGEVIGFDSAANFSRAFTHQFGYSPSNIRKQTATGAPA
TRLIYHRRLRSKAYCSRLAFSDLFFPAFFFMSAEPPKSIEFTENFHDSSA
NCLNYEC
>BAB1_0311 Bacterial regulatory protein TetR, HTH motif
MAIAPSDFRNGSTAKEKAEGGTRIQSINRRLILDAALDVFSAYGFRGSTI
DQIAEKAGMSKPNLLYYFPRKQNIYVTVLEDTLATWLEPFEDIDPDGDPL
EELRRYIARKLEISASKPEASRLFANEILHGAPAIAGFLKGRLKELVDEK
AAVIHRWIAQKRIAPVDPYHLIFTIWAVTQHYSDFAVQVSAIMGPRAEAA
NFYDEAARAVSAIILDGIRLRDDAPKS
>BAB1_0608 conserved hypothetical protein
MRHGITAEDLAKILGLSEERYDLWLRRLKCTGSEAKAPQRPIEGAFERLQ
AELQRLLDGEQLPDKSKAEALMALAKAVKTVDELTAESTTTETGREIATP
DIKEVRQALARIDRRIEELAEKRAREILGGGPGVSADIGSARRMADPGA
>BAB2_0626 Prokaryotic transcription elongation factor GreA/GreB
MNGKNRKKPNIVVSEVDYERLMGLASNASERFEEIAEELMAELDRAKVVT
AKRIPENVVQMGSTVEFRANDGHERRVTLVYPGEADIAKNRISILTPIGT
ALIGLAPGQSISWTARDGKQHELNVLKVMRTDEAAEEVRAKAGNVVAFAG
RDAVGVASEDDNDPGPSAA
>BAB1_0237 Bacterial regulatory protein, MarR family:Bacterial regulatory proteins, IclR family
MREPTLETDDRYRAPALDKGLDILESLASVDGGLTQAEIAKHLDRSPNEF
YRMLDRLVKRGYVTKLDGDRYSLTLKLFGLAQLHAPVRRLASFATPFMRE
LADRSKQANQLAVFDRGSVVVIAQQEAPDYWGISIRVGSHISLFDTGSGH
VLLAFRSPEEREMMIAAHVKSRDEVNLDQDFYDRLDQIRERGYEMMASAQ
MAGAYNLSAPILGPDGTCIAALTCPYITLVNPSSAPDITQTISLLQKTVR
DLSKLVGADVGVTG
>BAB1_2059 ParB-like nuclease:ParB-like partition protein
MNDDPSKKRLGRGLAALIGEIDRPVEERKAPVPIERNIPIEFVTRNPRNP
RRMFSETELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWLASQ
RAGVDTIPVIVRDVDDRVALEIAIIENVQRADLNSVEEAMGYQQLIDNHD
YTQNDLAQVIGKSRSHVANTLRLLKLPQRVQDFIVDGALSAGHARSLITT
ENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKPGKAAPAEKDADTKA
LEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS
>BAB2_0780 Bacterial regulatory protein, ArsR family
MDTRLVTREQMEARANEVAELLKTLSHPARLMLACTLAEGEYSVGELEEM
LGIRQPTLSQQLGVLREADIVETRREAKQIYYRLVETKAAKLIDALYGIF
CKEGTDS
>BAB1_0677 Helix-turn-helix, AraC type
MPENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLC
ASQGVVLVTTDAGRWMIPSDHAMWIPAGVEHSVAILGDVFMRSIYISVDA
ISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHT
LPEYPLGLPFPSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRH
FQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGYDSVSAFTTMF
RRMLGVPPKFYQPRLDVAPFERSDKAAFG
>BAB1_0213 TENA/THI-4 protein
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYL
RQDYVYLHHYARAFALGVVKANTSQETRLCADIMHSLTHMELPLHVRICA
REGISEDALYATREEPENLAYTRYVLDCGQAGDFLDLLTALVPCAHGYGE
IGLNLAATARAGTPYQEWIDTYAGSEYQDMCRTVGRLFDQAARDRIGDDF
EKSPRWPKLCQIFATASRLEADFWSMGLKAGS
>BAB2_0766 Bacterial regulatory protein, MarR family
MTTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLAR
ARVLLLLAQQRDWNQRELADALEIEHPSVVRLLDGLEKQGMIVRASVEGD
RRAKRIELTEEAQAQVRQLGEITRTIRQEMLENIDRQSLETTLKVFHAIS
RKVEKALNGQDG
>BAB1_1605 Bacterial regulatory protein LysR, HTH motif:Bacterial regulatory protein, ArsR family
MTNKVTFYDLVENADQAADFLSALDNNKRLLILCKILHNEMSVGALAKAI
DLSQSTLSQHLAKLRALDLVSTRRDAQTIYYMVSSPHIELMLSTLSGLYM
SPTPRRREMMAVAHQ
>BAB2_0249 Bacterial regulatory protein, MarR family
MVKRASETDQRQSHVYLTQAGLQTIKAIEKSIRKTEKDMLKGLDKKDRKS
LLKMLSRMEGNLVLRGAARVADEPETEPQEDDEAE
>BAB2_1164 ParB-like nuclease:ParB-like partition protein
MARKNIFDSVMRDEPAAEQASAPAENVSRRFGAAKSLSASIDELAKQASQ
RLDGETVVELDPADLDASFVADRLPETDDQEYKDLLEAIRERGQDSPILV
RPHPQTSGRYMIVFGHRRARVARELGIKVRAVIKPLADLEHILSQGQENS
ARANLSFIERVFFAARLEAMGFGREAIQAALTVDYQTLSKMLTIPKAIPE
EILLAIGPAKGIGRDRWLELRKLVEMPGKKAAAAELIETDSFKSASSPDR
FEQLYGYLKGGRQKRPVTKSASRPGSIWTAPDRGLNVVIKQTGKTATLAL
GAANGHRFADWLSRNLDELYASFKNDQG
>BAB1_0337 Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI
MSVVNETGRDLGGKAEATADVPPRRLSVGIVVLPGFTLSALSLFLDPFRL
AADDRDKSRQIRCAWKICTLSGDPVTSSSGMVIEPTVPLGEIDEYDYVAV
VGGLLAQYRHSQQALIDLIKRADKRGKAVVGLCTAAFLLAEAGVLEDRNC
CVSWFHRDDFLELFDGYTADTTSLFHLSGRHYTCAGGLGAAALALSIIQN
EISEELARKIASILLIPYELVRSEQPALSFNGVRSPMIRKAIRIFEETLE
DPVPMIDVARRLGISVRQMERGFRLSLGRTAFEVREELRVKKAKELLAET
SLSLLEVAVASGFTDTRSMNRSFSRQKQKAPRDYRRQR
>BAB2_0350 Bacterial regulatory protein, MarR family
MMHKKPDTNLDLADMLCFAVYSTANALSRAYQPILAPLDLTYPQFLVMLV
LWERDDCTVSEIGARLNLDSGTLTPLLKRLEAAGRITRRRDPRDERQVRI
TLTDEGRKLREQAESVPEQIMCATGQPVSELQDLRNRLMKIRNHLTADGK
K
>BAB2_0118 Bacterial regulatory protein, LuxR family
MSLDLVHFPNYKKTFFGSSFQSDTLALLTRIRDEIGCRYVTHTYRGRVGD
CTKVNSADLTVLMTLPATWVARYSSKNYFAIDPVFQEDAPYYRNDTSAIA
RDLKEDADICPAVAELLHDAEKHGLGNLFIAVSARNPKGVAGCTVFTFEV
EDEDRTQFLARMRPRLLSLAGIIHGTVCGCKDANSVASLLTPREVDCLRW
AANGKTDGEIAEILSIARWTVVTYLQNAKIKLNCSNRTSAVATALSLGII
DMPEVQHLV
>BAB1_1804 Bacterial regulatory protein, MarR family
MTVWSPNRSKRALSHHACVRLASLLENNPPAIYSAIVSLLIYEAIGMSRA
DLRAEMIDAMAKVNRRLRTVFDARVKERGLTLARARTLLALIEQEGLYQK
ELAEALEIENATMVRLLDGLERQSFIERQAVQGDRRAKRVVMTAEGKQLA
AQVEKLAGDVREDLLDGVSDEELSIALNVMRKMSSSMSKTH
>BAB1_1962 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family
MVKEPRFSSRLEKPLTTAQYVADYLRKRMLSGEIRAGDRLKQNHLAEMLG
VSSTPVREALRDLAAEGLVRLDARSGCVARGLTFQDAEDIYTARLALEPI
LLKRNFARITPEILEECETINEKMRAETDLVVWARLNNEFHMKLLGIDYP
SRMTEIVQQLFEYAEPFVAISLYAHEEQLKRSYDEHRLLLEKHRQNDLEA
ATELLYRHQRMTLSLIEKKMKDRSVAL
>BAB2_0962 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family
MERKRGSGVRMVYDLLRDEILDMKLAPGSPIDEVQLAERFGMSRTPIREA
LVRLSSEGLVETLPNRSTMVSNIDFLNMHTFFDALVLMYRVTTRLAAQYH
RPEDLRIIHELQAQFTAAVDAQNALGMIATNAAFHAAIADAGRNAYFTGL
FNRLLDEGRRIMRLYYQSYDDRLPRRFVEEHEEIIAAIEARDVAQADRLG
KIHAEQIVEQVRKLFERKAVLDIEL
>BAB2_0560 conserved hypothetical protein
MRKTGDGPEAPVDPREAGFEDVTLPKHLRPVASIGPIVSSAHLAEGGSPA
MSEVEYGLILASHAFSRWMVRCMAAAGLPGLSPIEILILHSIRHRDREKK
LADICLVLDIEDTHIATYAIRKLEKAGLLTTGKAAKEKTVKITAKGAEAC
AHYAQIRERLLVDSTANARPSEETLSELAALLRFMSGAFNQATRSAITL
>BAB1_0887 Bacterial regulatory proteins, AsnC family
MDRLDRKILRLLQEDATLAVADVAKKVGLSTTPCWRRIQKLEEDGVIKRR
VAILDPVRVNARVTVFVAVRTSSHSHEWLKRFSEVVQEFPEVIEFYRMSG
DIDYLLRVAVPDIAAYDAFYKRLISKIEIRDVSSSFAMEQIKYTTELPLD
YMVLDKENN
>BAB1_1532 Cold-shock DNA-binding domain
MAQTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVS
YETEPDRRGKGPKAVNITITG
>BAB1_0201 Helix-turn-helix, Fis-type
MGAPQDRIHADRIQSAIATGGAARSALVASWRRSAELHGLDPTEPGSVRT
LSENEFRIAFERMDRLVNIAQASMDRLYMAVGGVGCCVLLADNNGVPVER
RGAAGDDETFYRWGLWTGAVWSEESEGTNGIGTCIVEQRALTIHREQHFH
TRNIGLSCTVAPIHDHRGHLMAALDVSSCRADLTEAFAQLISVAVIDAAR
RIEAENFRQAFPDARIMLAPTPDRTGGALIAVDKDDLVIGATRAARLALE
LDDEALAGALPAADLLGMPADPREDMAESERGVILRALARAEGNISAAAQ
LLGISRATLHRKLNRLKIIRSH
>BAB1_1614 ctrA, Response regulator receiver:Transcriptional regulatory protein, C terminal
MRVLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGIDLGKLYDYDIILL
DLNLPDMSGYEVLRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMT
KPFHKDELIARIHAIVRRSKGHAQSVITTGDLVVNLDAKTVEVAGQRVHL
TGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKK
LDAVSGNQSYIETVWGRGYVLREPDAEMRESA
>BAB2_0369 eryD, Putative sugar-binding domain
MADADDSLALRAAWLHFVAGMTQSAVAKRLGLPSVKAHRLIAKAVADGAV
KVTIDGDITECIDLENRLADLYGLDYCEVAPDIGEEGLPLMALGHAGANF
MRREIEHGDHEVIGIGHGRTLSAAVGYMPRVMANDLRFVSLLGGLTRNFA
ANPHDVMHRIAEKTGMPAYVMPVPFFANTAEDREVLLAQRGVTTVFDMGC
RAELKIVGIGTVDAQAQLVTSGMIELGEVEEIANLGGVGEMLGHFFNANG
QWLETALTGRTIAASVENADMSRIVALAGGLSKVDAIRAVLKSGRLYGLI
TDERTAKALIGQPNGK
>BAB1_0199 glpR, Bacterial regulatory protein, DeoR family
MQLTPRHHAIVELARRKGQVLVDDLAVAFDVTPQTVRKDLNDLCRARLLR
RIHGGALYPSGVENMEYEARRRIAAHEKESIGRATAAIIPDGASLFINIG
TTTEAVSHALVDHNHLMVITNNINVANTLRVYPSIEVVIAGGVVRASDGG
IVGEAAVDFIRQFKVDFAIIGTSAIDEDGALLDFDFREVKVAQAIIANAR
HVILVTDSTKLERTAPVRIGHLSQVNTFITDRCTSLQLQDLCREHGVELI
ETLAGKEPEQKDD
>BAB1_1523 greA, Prokaryotic transcription elongation factor GreA/GreB:Prokaryotic transcription elongation factor GreA
MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHA
AKEAQSLNEGRINELEDLVARAEVIDVSKLTGDRIKFGATVTMIDEDTEE
EKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPGGSRSYE
IIALKFV
>BAB1_0171 hrcA, Negative regulator of class I heat shock protein
MPQPYIYYIQFRGFAEQAMMRPPEHQLLSSLDQRSRDIFRLIVETYLNDG
DPVGSRNLSRLLPHTLSPATIRNVMSDLEHLGLIYAPHISAGRLPTQIGL
RFFVDAFLEVGDLPPEERSSIEAQVRAAGTSNSVESVLTEASQVLSGLSR
GAGLVLTNKTDVALKHIEFVRLEPMRALAVLVMQNGDVENRVIDLPAGIS
TSQLIEASNFLNAHIHGHTLSEAKSELRKLSEETRRELDQLSQELVAKGL
AVWSGAGADQPARLIVRGRANLLENVHAQEDIERLRHLFDDLETKDGMVQ
LLDLAEAGSGVRIFIGSENKLFSLSGSSLVVAPYRDSEQRVIGALGVIGP
TRLNYARIVPMVDYTAQIVSRLLR
>BAB2_0308 hutC, Bacterial regulatory protein, GntR family
MAGEDSIAKDVPALSLHQRILDDIESRILSGEWLPGHRIPFEHELTEYYG
CSRMTVNKALTQLSKAGLIERKRRSGSFVSFPQSQAAILEIHDIREEVAA
LGLPYRFELMNRWERLSGPADARRLDIARHTPLVELLCRHYAGKRVFALE
ERIINLEAVPAAAETDFAQNSPGPWLVACVPWSSAKHTIRAIAATQEAAA
KLDIAPGSPCLVIERQTWNADQPVTHVRFTYPGDSHALVARFTPSRG
>BAB1_1167 lexA, Peptidase family S24:Peptidase S24, C-terminal:LexA DNA-binding region
MLTRKQHELLLFIHERLKETGIPPSFDEMKEALDLASKSGIHRLITALEE
RGFIRRLPNRARALEVLRLPDSIAPGLSPQKKFAPSVIEGSLGKVASVQP
VRPAPAPQNSEAPATVSVPVMGRIAAGVPISAIQNQTHMLSLPPEMIGAG
EHYALEVKGDSMIDAGIFDGDTVIIKRGDTANPGEIVVALVDEEEATLKR
FRREGASIALEAANPAYETRIFGPDRVHVQGKLVGLIRRY
>BAB1_1521 lrp-1, Bacterial regulatory proteins, AsnC family
MPIKADLDEIDWKILRELQNNGRITNVELAERVGISAPPCLRRVRKLEES
GVIRGYRAILNGNTLGQDLVAFCSVGLHRQADADLKAFAEKTKQWPLVRR
AWMISGESDFLLHCVARDLNTFQTFVIEELTAAPNVDSVRTALTIRPVKD
EPLMIL
>BAB1_1587 lrp-2, Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein LysR, HTH motif
MKNLDAMDRSILRALQENGRLTNTELADRINLSQTATAERVKRLTREGYI
LGYSARLSPKRLDRAMLVFIEIKLDRTTPEVFETFSTFTRSNPDILECHM
VAGGFDYLVKARVSDMDHYRRFLSEALLSLPGVRESHTYAVMEEVKETAD
IAV
>BAB2_0661 mfd, DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Haem peroxidase:Transcription-repair coupli...
MYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARR
LAALSALCALKKAPHPAVILTTSNAVLQKLPPQAALGEQVISARPGNQLD
MNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGD
TLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDMISRFRKNYVAMFGA
PQRDDALYQAISEGRRFAGMEHWLPLFYDNLETVFDHAGPMPVVFDHLVH
EALTERHTMVVDHYEARLRQAEGKEAGSDAVPYKPVKPEMLYLTPGQVEE
AAEAAGLRIDLTPFGAPEVSGRTIIHADVHKGRSFAEERAATDVNLFEAV
VKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEHGLEKIETVDRLSTVKA
LSRDKVTAAVLAVESGFDAGDLVVVAEQDILGDRLIRRSRRRKRDQDFIS
EVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLP
VENIELLSRYGSEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAA
ERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMD
RLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRF
HGLPINVAHASRLVGAKGLAATKKGLEEGTVDIVVGTHALLGSSIKFKNL
GLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVREL
SLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLT
DIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVES
GLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLT
QMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFE
LYQQMLEEAVATLKGSGEVEDSQWSPQIAIGTAVMIPEAYVPDLQLRLGL
YRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVE
KLDAGPKGVVIQFRHATFNNPVGLVKMIGEQGSMAKIRPDQSIVFIRDWP
TPEKRLNGSAVIMTQLAKIAAA
>BAB1_2163 nusA, Ribosomal protein S1:RNA binding S1:KH domain:KH domain, type 1
MAVSANRLELLQIADAVAREKSIDREIVLAAMADAIQKAARSRYGQESNI
RADINAKSGEIKLQRLLEVVENVEDYATQISLFMARDRNPDAQVGDFIAD
QLPPMDFGRIAAQSAKQVIVQKVREAERDRQYDEYKDRVGEIVNGTVKRV
EYGNVIVDLGRGEAIVRRDELIPREAFRYGDRIRAYVYDVRREQRGPQIF
LSRTHPQFMAKLFTMEVPEIYDGIIEIKSVARDPGSRAKIAVVSRDASID
PVGACVGMRGSRVQAVVAELQGEKIDIIPWSPDAASFIVNALQPAEVAKV
VLDEDAERIEVVVPNDQLSLAIGRRGQNVRLASQLTGWDIDILTEDEESE
RRQKEFAERSNLFMEALNVDEMVGQVLASEGFASVEELAYVDAGEISSID
GFDEDTAGEIQDRAREYLERIEAEQDARRKELGVADELRELPGMTTAMLV
AVGEDGVKTMEDFAGYAVDDLVGWRERKDGDTINHSGVLTPFDLSRVDAE
QMVLAARLKAGWITEEELAAASEDVEAEEAGDEEAAS
>BAB1_0792 nusB, Antitermination protein NusB
MNSIPEGRPTPNLPRTANKRGVARLAAVQALFQMDVAGTGVMEVVAEYEA
FRLGKEVDGTQYLDADPQWFRAIVAGVVEDQLKLDPMIHQALTEDWPLSR
LDSTLRAILRAGAWELKARKDVPTAVIVSEYVDIAKAFYTEDEPKLVNAV
LDRLALVIRGESRGAKPRHKS
>BAB1_1269 nusG, Bacterial transcription antitermination protein NusG:KOW:NGN:KOW (Kyprides, Ouzounis, Woese) motif
MTARWYIVHAYSNFEKKVAEDIEAKAKQKGLSDLIEQIVVPTEKIVEVRR
GRKVDAERKFFPGYVLVRAKLTDSVFSLIKNTPKVTGFLGDSKPVPVSQK
EVDQILNQVQDGVERPKTSVSFEIGENVRVSDGPFASFNGIVQEVDEERA
RLKVEVSIFGRATPVDLEYGQVDKL
>BAB1_2146 phoB, Response regulator receiver:Transcriptional regulatory protein, C terminal
MSQVPRIAVVEDEEALSVLLRYNLEAEGYQVDTMLRGDEAEIALRESVPD
LLILDWMLPGVSGIELCRRLRQRPETERLPIIMLTARGEESERVRGLSVG
ADDYVVKPFSTPELLARVKAMLRRANPSILSHVLKVGDLLLDRQQHRVYR
KEKEVHLGPTEFRLLEYFMMSPGRVFSRSQLLDGVWGPDIYVDDRTVDVH
VGRLRKAINVGRAADSIRTVRGAGYSFG
>BAB2_0602 pobR, Helix-turn-helix, AraC type
MRKRIPTYELYGEETDQKPDFWLHCETLYSRSSLHNFEISLHRHDNFFQF
LYVESGTGNVNFDGVLHSFRTPCAIIVPPNFNHGFAFSRNIVGHIVTVLQ
PQMPFLESGFGTSTADWMMRPKLVQMEGADEADLAFLALTMRRIQSEYQS
RKMHKNSMLESLLKSSLVQIIRHALALQPEHDTWQSYREPRIERLLELID
RHFREHRPVSFYAGQLGLSATHLNRLTRRVAGAPVQHMIARKLIDMARRD
LVAMPSSVQHVAYSLGFSDPAYFSRFFQKMTGETPRAFRLRERERLSASM
PVTAQ
>BAB2_0659 recG, DEAD/DEAH box helicase:RecA bacterial DNA recombination protein:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Ha...
MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLL
FLPPHSIIDRRNRPGIAFAQEGAIVTLEVTVDQHQPAPKGRGNVPHRVFA
HDDTGEIALTFFHAQLPWLQKMLPEGETVIVSGKVEWFNGRASMVHPDYI
ASMDDAASLPLVEPVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLL
AREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFLAGQLALALVR
AKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRM
LRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLARQHFATIAPL
AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHD
LVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMD
VSKLTEKPVGRQPITTAIVPMERMGELVERIRKAVSEDQKIYWICPLVEE
SEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAMRAFKQGETRL
LVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLL
LYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGF
RLASIEAHGDLLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAI
RLLRAG
>BAB1_2065 rho, H+-transporting two-sector ATPase, alpha/beta subunit, central region:ATP/GTP-binding site motif A (P-loop):Cold-shock DNA-bi...
MQEMKLQELKNKTPVELLAFAETLEVENASAMRKQELMFAILKKLAAQDV
EIIGEGVVEVLQDGFGFLRSADANYLPGPDDIYISPSQLRRFSLKTGDTV
EGPIRGPKEGERYFALLKVNTINFEDPEKIRHKVHFDNLTPLYPNERFKM
ELEVPTSKDLSPRVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITA
NHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVAEMVI
EKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDR
KVADKRIFPAMDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIE
FLIDKLKQTKSNAEFFDSMNT
>BAB1_0681 rnc, Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain
MNRTRPLPEIKMVSANKTASILEERTGHRFLNLKRLERALTHSSVQAPAR
ANYERLEFLGDRVLGLTVAEMLFEAFPEASEGELSVRLNALVNAETCAAI
ADEIGLADLIHTGSDIKSLNDKRLLNVRADVVEALIATIYLDGGLEAARS
FIQRYWKKRSLETGAARRDAKTELQEWAHQQGNVHPVYAILSRSGPDHDP
LFLVEVTVKGFAPEKGEGRSKRIAEQSAAEAMLYREGVWKRDGSA
>BAB1_1231 rpoA, RNA polymerase, alpha chain, bacterial and organelle
MIQKNWQELIKPNKVDFITHGSRTHATVVAEPLERGFGLTLGNALRRVLL
SSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPK
RMVVRKEGPGVVTAGDIQTVGDVEILNPEHVICTLDEGAEIRMEFTVNTG
KGYVPADRNRAEDAPIGLIPVDSLYSPVRKVSYKIENTREGQVLDYDKLT
LNIETNGSVTGEDAVAYAARILQDQLSIFVNFEEPQKEAPQEQVAELAFN
PALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSL
NEIKEVLASMGLHLGMEIPAWPPENIEDLAKRYEDQY
>BAB1_1263 rpoC, RNA polymerase, alpha subunit:RNA polymerase I subunit A, N-terminal:RNA polymerase Rpb1, domain 1
MNQEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTF
KPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRR
ERMGHIELAAPVAHIWFLKSLPSRIGTLLDMTLKDIERILYFENYIVTEP
GLTSLKEHQLLSEEEYMIAVDEFGEDQFTALIGAEAIYELLASMELEKIA
ADLRVDLAETTSDLKQKKLMKRLKIVENFLESGNRPEWMIMKIVPVIPPD
LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVD
YSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK
KLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPTLIEGKAIQ
LHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGAP
IIVPSQDMVLGLYYLSIVAEKEPGEGMIFADMGELQHALENKVVTLHTKI
KGRFKTVDAEGNPVLKIYDTTPGRMIMGELLPKNVNVPFDICNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFAHACRAGISFGKDDMVIPESK
AKIVAETEALTTEYEQQYNDGLITQGEKYNKVVDAWGKATDKITEEMMAR
LKAVEFDPVTGRQKQMNSVYMMSHSGARGSVNQMRQLGGMRGLMAKPSGE
IIETPIISNFKEGLTVNEYFNSTHGARKGLADTALKTANSGYLTRRLVDV
AQDAIISEVDCGAEIGLTMQPIVDAGQIVASIGQRVLGRTALDPILHPVT
GEVIVEAGRMIEEKDVEIIEKAGIQSIRIRSALTCETRNGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASY
EGTVKLRNRNVVRNSDGNLVVMGRNMAVLILDATGKERAVHRVTYGSRLF
VDEGDTVKRGQRIAEWDPYTRPIMTEVEGYVEFEDLVDGLSVSETADEST
GITKRVVIDWRSTPRGSDLKPAMVIKDKAGKILKLSKGGDARFLLSVESI
LSVEPGAHVKAGDVIARLPMESAKTKDITGGLPRVAELFEARRPKDHAII
AEIDGTVRFGRDYKNKRRIIIEPNDDTIEPVEYLIPKGKPFHLQDGDVIE
KGEYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEV
IVRQMLQKVEITESGDTGYIPGDHVDRIELEEINERLIEEGKKPGSGNPV
LLGITKASLQTPSFISAASFQETTRVLTEAAVAGKMDTLQGLKENVIVGR
LIPAGTGGMTNQIRRIATARDELIIDERRKTSGSAEANAMLVDMTNNAAE
>BAB1_1498 rpoD, Sigma-70 factor family:Sigma-70 factor, region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, non-essent...
MATKVKENEEAEVEREGAADGPLLDLSDDAVKKMIKLAKKRGYVTMDELN
AVLPSEEVTSEQIEDTMSMLSDMGINVVEDDEQDNDREEGNDDEAEEGGD
LVEAGGTAVATTTTKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKR
IEAGRETMIAGLCESPLSFQAIIIWRDQLNESNILLREIIDLETTYAGPE
AKQAPVIERVEEEKPRDERPQRRSRDDDDITNVGGDMPVEDDDDDEDEAN
LSLAAMEAELRPQVMETLDFIADTYKKLRKLQDQQVEGRLAATGELSSSQ
ERRYKELKDQLIKAVKSLSLNQNRIEQLVEQLYDINKRLVQNEGKLLRLA
ESFGVRREDFLKEYQGHELDPNWVERVATLPSRGWKEFAAKEADSIGRLR
SEIQNLATETAISIGEFRRIVNQVQKGEREATIAKKEMVEANLRLVISIA
KKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITR
SIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPL
EKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKNALLPIDAAIQANLR
DTTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIE
AKALRKLKHPSRSRKLRSFLDS
>BAB1_0157 rpoN, Sigma-54 factor family:Sigma-54 factor, core binding domain:Sigma-54, DNA-binding domain
MALSPKLDIRQSQSLVMTPQLMQSIKLLQMTHIELDQFLDMEIEKNPLLD
RIEADSDDLAGGEPASGADDPTESADNDDWFQTEGAGAAENLSATFDNSL
ENIFPDDLGSSQEQWKLSAGEGAFSGNGYDIDQVTAGRLSLSDYVAEQIV
LGFSKAADRFIATALADALDESGYLRIDIVGLAHNLGIETAEIGRILGVL
QGFDPPGLFARDLRECLAIQLRLKDRFDPAMEALIANLDLLARRDFATLQ
KICGVDQADLIDMLAEIRALDPKPGARFEVSVADTIVPDVLVFSARDGGW
AIELNPATMPRLIVNNEYYAEVSGSVKTEEKAFLTDCMQTAGWLVRSLDQ
RARTILKVAQEIVRQQDGFLRHGVAHLKPLNLRMVADAVGMHESTISRVT
ANKFMATPRGVFELRYFFTASLASSEGGEAHSSESVRHRIRQMIEAEKPD
EVLSDDAIVDALKKDGVDIARRTVAKYREAMNIASSVQRRREKKARFSTP
>BAB1_0303 ureG-1, RecA bacterial DNA recombination protein:ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:Urease accessory...
MTQKNGPLRVGIGGPVGSGKTTLTEKLCKAMRDKYSVAVITNDIYTQEDA
LILARRQALSEDRIIGVETGGCPHTAIREDASINLQAVVEMTRRFPDLDV
VFIESGGDNLAATFSPDLADLTLYVISVCQGEEIPRKGGPGITRSDFLVI
NKSDLAPYVHVDLEVMEADAMRMRAKRPFGFTDLHRGKGVQEIIDFIVEN
GGLEPRSN