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2024-05-02 01:06:13

Gene list

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COG category: Transcription
Organism: Treponema pallidum subsp. pallidum str. Nichols, Nichols

Number of genes found: 36

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0019 transcription elongation factor (greA)chromosome CDS21558 489 + 0.453988
TP0082 formate hydrogenlyase transcriptional activator (fhlA)chromosome CDS90629 1803 - 0.5269
TP0092 RNA polymerase sigma-24 factor (rpoE)chromosome CDS101622 489 + 0.541922
TP0093 T. pallidum predicted coding region TP0093chromosome CDS102094 648 + 0.552469
TP0111 RNA polymerase sigma-54 factor (rpoN)chromosome CDS126974 1428 + 0.478992
TP0167 cation-activated repressor protein (troR)chromosome CDS188470 462 + 0.508658
TP0212 DNA-directed RNA polymerase, alpha subunit (rpoA)chromosome CDS216003 1056 + 0.493371
TP0218 sigma factor SigB regulation protein, putativechromosome CDS222201 1470 + 0.463946
TP0219 sigma factor SigG regulation protein, putativechromosome CDS223674 2148 + 0.416667
TP0236 transcription antitermination protein (nusG)chromosome CDS242499 558 + 0.528674
TP0241 DNA-directed RNA polymerase, beta subunit (rpoB)chromosome CDS245585 3537 + 0.499293
TP0242 DNA-directed RNA polymerase, beta' subunitchromosome CDS249134 4251 + 0.505999
TP0254 transcription termination factor Rho (rho)chromosome CDS265517 1560 + 0.489744
TP0271 chromosome partitioning protein (parB)chromosome CDS287537 975 - 0.531282
TP0344 transcription-repair coupling factor (trcF)chromosome CDS366459 3423 - 0.496348
TP0380 DNA repair helicase, putativechromosome CDS405261 1821 - 0.548051
TP0431 conserved hypothetical proteinchromosome CDS459063 822 + 0.574209
TP0458 conserved hypothetical proteinchromosome CDS488333 579 + 0.585492
TP0461 T. pallidum predicted coding region TP0461chromosome CDS490476 360 + 0.577778
TP0493 RNA polymerase sigma-70 factor (rpoD)chromosome CDS527891 1836 + 0.490196
TP0511 transcription factor (carD)chromosome CDS547001 627 + 0.497608
TP0665 T. pallidum predicted coding region TP0665chromosome CDS727016 756 - 0.575397
TP0687 DNA recombinase (recG)chromosome CDS752821 2061 - 0.425036
TP0701 DNA-directed RNA polymerase, putativechromosome CDS766966 204 - 0.514706
TP0709 RNA polymerase sigma-28 factorchromosome CDS775888 789 + 0.508238
TP0739 conserved hypothetical proteinchromosome CDS804190 1197 - 0.458647
TP0770 ATP-dependent RNA helicasechromosome CDS835978 1950 + 0.534872
TP0788 T. pallidum predicted coding region TP0788chromosome CDS853354 891 + 0.581369
TP0805 exoribonuclease II (rnb)chromosome CDS873482 2280 - 0.555263
TP0809 ribonuclease III (rnc)chromosome CDS877865 765 + 0.568627
TP0854 T. pallidum predicted coding region TP0854chromosome CDS924984 4602 - 0.485224
TP0892 N utilization substance protein A (nusA)chromosome CDS970473 1458 - 0.496571
TP0924 tex protein (tex)chromosome CDS1002996 2337 + 0.555413
TP1012 RNA polymerase sigma-43 factor (sigA)chromosome CDS1103040 936 - 0.501068
TP1015 N utilization substance protein B (nusB)chromosome CDS1106357 426 - 0.532864
TP1029 T. pallidum predicted coding region TP1029chromosome CDS1123124 687 - 0.614265