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# Tropheryma whipplei str. Twist, twist

>TWT118 DNA helicase
MFPEIQENMTNAVIKDRTSHLLSALARTVREVEMSLVRKRIGPSSVMRFH
AVALLLRQERARVKSDPDITDTVRTELIRRLDGLAAVMVRIAARDTALMS
IVTPDAPVSDGALLYRRRLLSQIGVIDPDGGSSEIREAAPPPPSLELYPQ
SVKMYHATHIFRPPGPDMESDLVPIIRLANWDLVGSVFKAFSQGGASVCK
SLPAPSPFLDRLAPDGLSMMPHQAGFVESARLGHRSFLLADEPGLGKTAQ
SLLAAGVTNSFPLLVVVPNVVKLNWVREAKMWLPGRRATIISGDDLDAFA
DIFVINYEMLDRHMLWMVDFGFAGMVVDEAHLIKNFSSQRSGNVLALAQH
IRKKCCNPLMIALTGTPVINSVEDFRALWLFLGWLAGPRGRDLSPVFVSE
LEKTGLTPEDPGFSETVRDVMGHLGIVRRRKTQVAKDLPERMVVDLPVEL
DGDAFRSVKNAEDDLADALYAQYISLKHLRIDDYQIRLKAVERFAVESKD
SSALNIFSIVRKIGITKAPLAIDFTIQMLDSVGKIVFFAKHIEVMNMAEE
MFCQQGIRSVSIRGSQTPNDRKNALRTFDEDPDTRVAICSLTAAGLGINL
QVASNVVLSELSWTAAEQGQAIDRLHRIGQTEPVTAWRILGAGTVDIRMA
ALVDSKSNDAILSLDGGDMREVQQESLHIRSLLDLLDDRIRKAEQHVE
>TWT728 transcriptional regulator
MSKKPSLPGKLFRVFIVFFCFLLLVSVGIAAYVYVDLSRAIKRNEAVDLG
GRKLPEDYKGAFNVLIVGSDSGGGDPRYKRGGENLADVTILVHVSADRTH
AEAVSIPRDTIVDIPQCTGANGTSLAAQKKVRFNSSLFRGGLGCTVKTAE
LLTGLNIEYAALLQFNSVIGITETIGGVPVCLKGPIKDKYTGLDLPAGLH
NISGQTALAFLRSRHSIGDGSDLSRIRSQQGFLSSMLRKIRKINFVAEPL
KAYSIFRTILSNTTLSTSLNSLEKLGGMLLATLKVKPGNFVFLRYPTRVV
GNVVYPVLQQAKALNEALLEDRPITLLGGKNNRLGVEITTPSAISETPSS
PTKQTESIPATTSPIGVEIQSIGQTGEDESCVVPYGE
>TWT047 two-component system response regulator
MLELVRIVAPAIFGNSALHAGSKFMSQTKILVVDDEANIRDLLAASLRFA
GYGVVTAGNGAGAVSAVLAEEPDLIIMDVMLPDMSGFAATKRLREAGFRC
PVIFLSARDSTEDKITGLTVGGDDYVTKPFSLDEILARVAAILRRTKIDD
VDATIRVGDLVIDQNSNEVFLKGNLIDLSPTEFKLLRYFMLNPNRVLSKS
QILGHVWDYDFDGDSSIVESYISYIRRKLAAYSSETIIHTKRGFGYIMRT
R
>TWT597 putative serine/threonine-protein kinase
MIPFFNKHTRSTDDKDTEKARQIIGNYRVIKTLHESDRAVIYLAQEISGD
PGMVARQSFMDPGELVNLVALKMYRAGVTSEHIAIEADALDSLRGPGVVE
LRDVLNLPDKRGLVMRALHGPALVDLWETRGSLSPGEMVTILASLVATLA
RISSAGYAHGAVWPGNIRFDDIGRPVLTGFSSARKHAPPNADWLDFYSLL
RGCAVLINEKQEQMLQISAGVRKRLDPFDPELPAWVEASLFRLADPQPLR
FEHPISLHDTSGYNLRESPNPVDSNRQTGKSQIILKLTDNKYVAAILGKL
KRPSVLFIALFVSVFVVLLMVIPNNSGEDNERKSEKPGYVKSKGTFKKPS
KTGKSRKRSEVSEKLRKNMEECLASKDADCVDVMSEINADLGEKLDEG
>TWT349 transcriptional regulator
MQFKVGQTVVYPHHGTASILEIKKRVIRGEEVTYLKLHVSDGDLMIEVPA
EKIEAVGLRGVIDSDGARRVVEVLRENLVDEPTNWSRRYKSNLEKIASGD
VTKVTEVVRDLSRREKTRVLSAGEKRMLTRARGILVAELALARHTNQEDA
EALLDEVLAE
>TWT235 unknown
MSSAQEKTDRPFTIGQVLSILKKEFPDVTSSKLRFLEEQKLIIPPRTSAG
YRVFYPADVKRIRVILRMQRDEYLPLKIIRSRLDSANIALSTTSGVSMRR
EELVSRAGVPATLFTEAVTHSLIKPSECYGQDTLKLLVCLAALKKMGISP
KHLTFLKKTVDKEYLLSHNAVLPLRVRKDEGLLEHSFCELLNNMQVIQAI
LVSQVKKDFLQSSKSKIDPKDLASS
>TWT237 transcriptional regulator
MRCLFCRSDDTKVIDSRTSEDGISIRRRRECQLCKRRFSTLETASLTVIK
RNGTSEPFRREKVVTGVHKACQGRPVTKADLAVLAQRVEESLRASGNSQV
DSNDIGLAILPELLRLDQVAYIRFASVYQDFDSLEDFSRAVERLKNQ
>TWT112 iron-dependent repressor ideR
MNDLVDTTEMYLRTIVNLEEEGISPIIKARISERIGHTAPTVFQTIARMQ
RDGLLVVSSNKSLILTSKGRKIALSVVRKHRLAEVLLHDVVGLEWEHIHL
EACRLEHVMSDHLEEHLRRILNNPSFTTYGTPIPPADSDFVEPFRDVISL
SRAVIRQKARKLSVRCLGEIAQQDTILLSQLSKAGLRPGGLGSFMDSQNG
ILSWTNSGNKFIISHYIAECIFVNQN
>TWT061 transcriptional regulator
MFNQPGLLFRIFVLLRTCMGLSRKNAQSAEKLFKCLASASRLKILFVLLE
SEKSVGDITVDCDMSQPLVSQHLRHLRDNNLVYTKRHGKQVYYSIADEHI
KHVVADCIQHVQHET
>TWT236 unknown
MSGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSG
SQRIYDFKDILVLKLVRRLLDVGISLQQIRVAVEQLRSAGLKDLSAVTLM
SDGVSVYLCRSNSDVIDLLAKGQGVFGIAVGKVLREIEDTLTGIESREMN
AERKYLLL
>TWT048 capB, cold shock protein B
MPLGTVRFYNKERGFGFVVSDDGESVFLPAKALPDGVSDLSPGTRVDYGA
ALGKKGSQVLSLRVLRKPPRRGVRSTDDMAVIIEDLMKILDEAGESFKRG
RYPKAERAKVLAAMLRQVADGLDAN
>TWT213 glkA, glucokinase
MYFVFLRAVLVRAIGVDIGGTKISAALVDRSGNMDGQLTVPTDPVGVIDQ
VVELVNKLSDGESVCAVGVAVASFLNYSRDFVYNSPNLGLENIPIRNLLQ
NRIKFPVFIENDANAAAWAEWRFAPRSVEIVNSQDLFMITVGTGVGGAAI
LDGKILKGGFGIASEPGHIVLVPDGIPCGCGKRGCSEQYASGTALLRYVK
SNMPDFPFGRNPSDVIGELVAKSDPVVLSAVSQVADNVGRTAAAVTAILD
PELFVIGGGVSKIGTFFIDSIRESYKEYLPHSESRPCANFRLAHFYNTAG
IIGAADLARSSLAT
>TWT680 greA, transcription elongation factor
MQKLRAVGGYMPNDSETWLSKEAHSVLVVELEELVTTGRKEIAKRIEQAR
SEGDLRENGGYSAAKEEQARIEGRIQQLQDLLRHARVGQAPKARGVVEPG
VVVTARIGGSERRFLLGNREIAHTSSLATYSESSAIGQAILGLKEGSEIE
CKSPTGALIKVAILKVETYEGQ
>TWT747 hspR, heat shock regulator
MGTPQFFTVTVAAALSGMHPQTLRKLDRLGLLSPKRTLGGDRRYTAQDVE
GLRAISSMVSSGLTLEGIKHIARLEKELASLKAENHLLRQKLKNDRQGRI
FAAGQEIVTLEYGTRIKRGKALIVWREFHV
>TWT156 nusA, N utilization substance protein A
MHMKIDLSVLRAVEREQRVAFDDLVRIAEQAVVMAYLRHTGLEDADLVKA
KLNRKTGEIDLRVKHDGDFIPYKSDAFSRMAATAAKRVITSKMRTLSDDS
TFARYKTKIGTVLSGVISQSTSQNFRMVSLDRRTEAILRPEEQIPGEEYP
HGKMVKVYVTDVTLGPRGSNVYVSRTHPGLINGLFLQEVPEIASGTVEIV
AVSREAGHRTKVSVRSNSKSTSAVGACVGEYGCRVRAVTSEICNEKIDII
SYSDDLGQYVANAISPATAADVFVLDSRQKVVRVYVSKEEYSLAIGKEGQ
NARLAARLTGAKIDIRIDE
>TWT715 nusG, transcription antitermination protein
MPSGRPVREIYVMEKTDTAHDPYEEFKVHLRSLPGKWYVVHSPAGFERRA
KANLETRVVSMNADQAIYQVEVPMEDVVGIRNGQRKMITRVRIPGYVLVR
MDLNESSWAVVRNTPWITGFVGNMHQPVPLSFEEVFDMLKTTVSVSQTAA
RQKRSVTVSDVDLEVGETVVIKTGSFAGLPGTISEIKPENGRLTVLISLF
ERETPVELAFDQVEKQA
>TWT801 parB, chromosome partitioning protein ParB
MTSRRSGLGKGLDDLTSSAPADRGPIEAFFPSNSPFRFSGVINVPITDIS
PNPRQPRKVFDPNSLSELASSIKEVGFIQPIVVRKTKLGYVLVIGERRLR
AAKMAGLSHVPAIVKTLDNRDMLRQALFENIHRAELNPIEEALAYSELLR
EFDVSQDELGQTLGKSRPYVTNTIRLLRLPPEVQDLLTKGKITPGHARPL
LALENRAEMIRLAKRIADAGLSVRQAEALITTSSPKRLFVAGSVRKGLDA
AAASLGREFDTKVSVNIGQRKGKIVIEFTTVADLRRILLKMGVPPSGL
>TWT777 pknA, serine/threonine-protein kinase
MSFDAGTVLGKRYRLIARIAIGGMGEVWKAHDEVIQRHIAIKILKEEYVG
SRDFIERFRTEARHAAIVNHVGIANIFDYGEEKGIAYLVMELVDGEPLSA
VLERERMLPVEEVLRIVVQISRALQAAHSAGLVHRDIKPGNILISESGLV
KITDFGIARIGDQVPLTTTGQVMGTVHYLSPEQAAGKKADAMTDVYSLGV
VAYECLTGKRPFVGDSQVAIAVAHVGDTPANLPKDIPRPVARLVLGCLEK
QPQRRPKSAGNLADAASALLKDDLAEAARAYPPLAASGEQNGSGQVLDNQ
TKAISTTTSLYSKLGQFDTRLLGQTMEFNGGSESKPARGKWVLPVVGTIT
ALAVIVGGGALAIIVTGNRGGLTETKTGVSTHDVTQTAASYIPTIVSPNT
RPAGNTVVIDPGKYVGLSFDGVQKALFALGVGIKRLSAGPAPSADKAGLV
ESISPTGTLTIPAVIDVKVYGPPVMTPPAFAPRLIGTPKIGGSVYVSWPV
YTSCPAGSQVTLYRISVDGAVLQGPGTVGADTTQVELLLIQNEASVKYSA
DCSVPGKNQTFNSGFSDVLKISTNGSHTPSIASSG
>TWT566 recG, ATP-dependent DNA helicase
MSFSILHPIRLRPSIMRFVSRDSSKLCIVVSPLAIAAIIKCLFVRDFDPG
IDILKSALLPRGGWYISVFAILLPTKIVVMEHVFFSDVSVHTGKKMASLL
AKEFGISRVIDLLTYYPRRYICRGKLTKLSELIPGDEVTIVGRVLSTEQR
KTFSGANFLSVTLSDGENIIQLVFFHQPWRAENLKPGACGLFSGKVTEFN
NKKQLSHPEYELFSSEPTREQIQKWNEQIIPIYRACIACPSWKIARAVDL
ALEAVKGQTVDFMSGNYGYMSVEKAFYVIHHPTDNEELEAAKESLRFFEA
FLLQSALLHRKRFRNRASATPFIRKNGGFLERFDARLEFSQTNDQLRAAD
EIFEDLSLSEPMTRLLHGEVGSGKTLVAIRAMLLAADNDMQAVLVAPTEV
LAKQHHRNLTRMLGHELCAEIQPSLLLGREKHTLRIASGRSKIIIGTHSV
FSKKTVFHNLALVVIDEQHRFGVGQRDELLLKGDSPHLLMLSATPIPRTV
ALSLLNFIAISEIKTPPSGKAEISTHVVPLAEKPQWGREVIRRISEEIQK
GHQVFVVAPVIEQSRTGAASISALLRELEETPLLQGAKISRLHGKLTAAE
CEKSMEEFSCGASDILLSTTMIEVGIDVPNATAMVIVSADRFGIAQLHQL
RGRIGRGNLPGVCLLVTNAPEGSAARSRLDLVARTHDGFSLAEIDMKMRR
EGDLLGLGQSGQGNYRLLRLDEDLQVLSDARLHAEGIMENDIKLEKNKLL
RLFLSQYLSGTNLSRLLS
>TWT275 relA, GTP pyrophosphokinase
MHRSFVMKIANISLFSRLFSQYRTTGIDNILKVIAKHHPKADLSGVTLAY
KIASECHKGQKRYSGEEYISHPVAVAEILSDLGMGPNGVSAGLLHDTVED
TDFTIDQVSETFGQEVALLVDGVTKLDRMKYGVNVQSESWRKMIVAISKD
IRVLVIKLADRLHNARTWGFVPIESAKRKARETLEIYAPLSGRLGIQNIK
TELEDLSFMVLEPKIYQEILELVNKRSPRREKLINEVRSGIDDELKLLRI
RGKVSGRPKEIYSIYQKMVLRGHSFSDIQDLVAFRIVVPTLRDCYAVLGS
MHTRWTPMQGRFKDYIATPKSNFYQSIHTTVMLDGGFPVEIQIRTPEMHR
QAEFGIAAHWKYKEKLRSPTVAFRKTAALDHESVYISRIADWQESSDSNE
LLENMRYELSVKDIYVFTPAGKLVGLPAGSTPVDFAYAVHTEVGHRTVGA
KVNSSMVSLDTPLSTGDVVEVLTIKSANYSPNKNWLEFVKSTRARNKIKS
FFTKSRREEAIELGKNALLKCFRKRNVSVKYVQKRLPELLSSLRFSDIND
VYRAVGEGRLKALAVVDTLSKLIHDTVEDETSPIQVIRTDKPATDKPANE
PSVLVRGIHDILVRLARCCTPVPGDEIIGYVTRGTGVSVHIMSCGNISHM
PEKDSRLVKVEWSRSAQTKPFRVSIQIDGLNRPDLINDITKVFSEYRINI
LSANLSTNQHRASNKFVCEAYDVSRLEKVMSEIRKIDSVYDCYRA
>TWT436 rho, transcription termination factor Rho
MSDGEDIRNLSLSKLRTLAIQRGIKSAYRYKKSDLLERLAAADKSVVDAA
DSPGESPITLDDLANAIPEGTPERQQTGDIRRVNEPDRVSITRERRGRSR
RRRIEEGILDSSQLVPIAGVLDVLDSCAFIRTTGYSPGDSDIYVSLSQVK
KYSLRKGDAVAGEVARVKSIDSYKQRHFPLVSVNTVNGLEFQQVTTRPAF
ESGMCVPPTRRLRITPKTAPVEKRIVDLVSPVAKGTRGLVRGPSKSGRTT
VLHEIAAGLCEQNKELHLITLLVGIRPEEATHMSRTLRGEVVVSSMECSP
EEQVGVAELVLERSKRLVEQGRDVLLIVDSMTHLGRAYALVGAPPSRLIG
SAAELSALRPITSFFLSARCIENSGSITMLATVLSESESAFDRLVEYDLV
AVSGMQLVLDKLASERRDFPAINPIRSSSRDEFTLLSASEQSEVKRLRVR
SEGS
>TWT562 rnc, ribonuclease III
MDGVDELLLRKFNLTLPPGLLRTAFVHKSFSFENGACQNNERLEFLGDAV
LGLVVSHYLFETCPEYTEGQLSAARSYIVSGTSIAQIAKELNLGQFMLLG
KGEKLAGGMDKTSLLADLLESLIGAVMVDQGFESARDFVLALVGEKLRQV
GEFSVDDPKTKLQKLTRTQLVYEVVTEGPPHSRTFKASVIVNEKRFFGQG
SSKKQAQVAAAMSALASLENKSS
>TWT528 rpoA, DNA-directed RNA polymerase alpha chain
MLIAHRPTLIEKKVSDIRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAA
VTSINIQGVMHEFSTIPGVKEDVTEIVLNVKRLVISSEIDEPFTVRLYKT
GEGEVLAKDIEVPTGIEIGNGDLVIATLAKDAVFDMQLTIERGRGYVSAE
QNRNDGMSLAGHIPVDSIYSPVHKVTYRVEATRAGERTDFDRLIIDVETK
PSILPRDAVASAGKTLCELFGLARELNSQAEGVEFGVDSMIPESDEDLRI
PIEDLGLSVRSYNCLKREGVNYVSELLGFSEQELLDIRNFGQKSADEVQE
KLAELGHSLKGSVPGFDGSYFDPNYGS
>TWT071 rpoB, DNA-directed RNA polymerase beta chain
MLQSFSLSRHLPSYCGRLWLCRGFSPSCPLWVSLFGVGFLASAKGKRVCA
IGRSSLGKISDPLEVPNLLDLQLDSFDWLIGGPRWRVALDAYRKNPSGAP
IAEKSGLDEVFDEISPIEDSAGNMQLNFSKPVLEAEELSVRECRVRGRTY
SAPLYVEAEFMNHDTGEIKTQTVFMGDFPLMTDKGTFVINGTERVVVSQL
VRSPGVYFERTPEKNSEKDLFSGRIIPARGAWLEFEVDRHDQLGVRVDRK
RRQPVIFFLRAIGMTDDEIRDAFGEFESISVQHEKNIGLSRDDALREIYR
RVRPGEQASAEAGRALLENFYFTSRRFDLARVGRYKVNRKLGVDVDPTRM
VLTRSDIIATIRYLAALHLGFSEVAVLNSNKSVPISTDDIDHLGNRRIRP
VGELVQNQLRAGLARMERVVRERMTTQDIEAIIPQTLINVMPIVAALKEF
YGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVNPSHY
GRMCPIETPEGPNIGLIGSLACYSRVNSFGFIETPYRRVVNGKVTDDIEY
MTATQEDEHAIAQASTPLRPDNSFVDERVLVRRKGGEVEVVPADQVDYMD
VSGRQMVSVATSLIPFLEHNDANRALMGSNMQRQAVPLLVTESPLVGTGM
ERYVAIDAGDVLIAEDPGIVGDVSADVVTVKQDDGKHRDYHVGKFVRSNQ
GNCYNQRVVVRSGDRVEKGTVLADGPCTDKGELSLGRNLLVAFMPWEGYN
FEDAIIISQNLVKDDTLSSIHIEEHEVSTRDTKLGSEEITRDLPNVSMDY
IKDLDERGIIRIGAEVGPGDILVGKVTPKGETELSAEERLLRAIFNEKSM
EVRDTSLKVPHGQQGTVIDVKLFDAVDGEDKLGAGINQRVVVYIAHKRKI
TEGDKLAGRHGNKGVISKILPVEDMPFMADGTPVDIILNPLGVPARMNFG
QVLETHLGWISKQGWKIEGDPDWAKDIRVREAQPDSRVSSPVFDGISEGE
ITGLFSSVFPNRDGERAVGSDGKAILYDGRTGEPFPEPISVGYMYVLKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHA
LQELLTIKSDDVVGRVKVYDAIVKGYPIPTPGVPESFKVIVKEMQSLCIN
IEVVSDGEDDVSADAETLQIEEGLDTSPKVEVGSLEEV
>TWT072 rpoC, DNA-directed RNA polymerase beta' chain
MSTSFKEIRVSMATTEDIRRWSYGVVKKPETINYRTLKPEKDGLFGEQIF
GPTRDWECGCGKYKRSRYRGVVCERCGVEVTQSSVRRERMGHIELAAPVT
HIWYFKGVPSRLGYLLDIAPKDLDKVIYFAAYMVVSLDEEGRKEDLQDLE
NELRLDIKQLRDACDASIASAVSELERTITELQDAKTSASRINKVRSEAE
NKMANIRREYDDKIEHLERVWDSFKALKVGGLYAEDDVFRDVQDRYGDYF
DACMGAEAIKRRLEDFDLQKTAQELGVQIVECRGQRKVRAIKRLRVVNSF
ITSKANPACMVLDVIPVIPPELRPMVQLDAGRFAASDLNDLYRRVINRNN
RLKRLLDLGAPRIIVNNEKRMLQEAVDALFDNGRRGRPVSGTNNRTLKSL
SDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLQLHQCGLPKLMALELF
KPFIVKRLLDLALAPNIRSARRMIERGDPAVWDMLDAVIKARPVLLNRAP
TLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSLEAQ
AEARVLMLASNNILNPSDGRPVTLPSHDMIIGLYHLTTVKPSAKGAGRAF
SSVAEAIMAKDRGDLSISAPVKILFSNIVLDGKTLDSAVVETTLGRAIFN
EALPDGHPYINELVDKQVISSIINNLAEVYSKVEVANTLDKIKSVGFHWA
TRSGVTVAISDVVSPPEKQEIISKYEAQARGVQQDFEIGLLTDLERRQAL
VSIWSEATDRVAEAMRKCFPDDNTINTMVTSGARGNWLQVRNIAGMRGLV
ANPKGETIPRPIISSYREGLSVTEYFISTHGARKGLVDTALKTADSGYLT
RRLVDVAQDVVVRERDCGFTRGVRMPVTFRGDDGELHKVENAEHSVYGRT
LAEDVKTPDDNLIAKAGEDISGIMIDSFIAAGVESVEVRSVLTCRSKVGV
CSACYGRSLATGARVDIGDAVGIVAAQSIGEPGTQLTMRTFHSGGSASAV
DITQGLPRVQELFEARTPRAAAPIAEADGTVSIEDGDRARRLILKSDNNE
EFSYTVLKRAQLRVKDGSRVSLGDQLVEGSLDPKEVLRVKGIRAVQEYLV
NGVQQVYRSQGVPIHNKHIEVIVRQMLRKVTVVDHGDTSMLPGELIDQSR
YQELNREAQAEGRKTASARQEVTGITKASLATESWLSAASFQETTRVLTQ
AVISGRRDPLIGLKENVIIGNLIPAGTGLSVYRDVEPEPRPEAISRMYPT
RRPEIENLLEGDSVDPEFDFSSLTQGLELPDDYPVQ
>TWT499 rpoD, RNA polymerase sigma factor
MPVKIKTQSRGSDKEAFAGAPSTSGASGAVLDEDLSTDPASHISAQATAS
DTDVASKGSEGDFEAIVLADTKDDESTPASPVISGATADPVKDYLKQIGK
VSLLTADEEVSLAKRIEAGLFAEEKLSESGDLAPKLKRELRWVVRDGQRA
KDHLLAANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYVKGF
KFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLSRVQRQLLQDLG
REPTPDELGRELDMPPERVVEVQKYGREPISLHTPLGDEGDSEFGDLIED
VDAVAPDDAVGFSMLQQQLRLLLDSLSEREAGVIRMRFGLDDDMPKTLDY
VGEYFDVTRERIRQIEAKTMAKLRHPSRSQCLRDYLG
>TWT362 rpoZ, DNA-directed RNA polymerase omega chain
MENVNTFLEKVLYMEEDRGIADPPLDSLLSRSGSKYGLVIYAAKRARQID
QYYIDLHEGSFYAHVGPLVSVDADDKSLTVAMREIAEDKLDLKSSAAE
>TWT182 trcF, transcription-repair coupling factor
MPGILFNIAWPYKSPADNLTCPTNSTHTYPHKIPLHGQLDKGFLNLLAAI
EAFIPTGFAATACPGGFSACKVASLVGDVDSLLVILPSEDACFTDTLRTY
LPESIILNFPEWDTLLHEQISPSPERVSARMEALHKISLFRKNNKRAKNA
QTSKTLHDIGILEDNLPTIHQKLVVVASIKAFMQPIISDGNPPCLYFHTG
GEYELSEIANILVAMSYSRTDLVGARGEFAIRGGILDIYPPTEKHPIRIE
FFGRQLESMRHFRVSDQRSIGPYVSNNAHVGMFAQYQDNSVCKCNVSLSS
NPHRCASHLSINNTYKPSAVMAPASEALIVYPTSEFPEEDQINNITPKSL
LHFMPGKSTVVVIKCEQLTSKIEQLINTNREFSEAFCTPDAFSATNKYAR
NNHDGDNTLDGIAEKINYYTLEGLRHFAADLGIGWTDLSGFNSEDEKSLI
TANPDFSGYSVFDHIRNLQKSGWQIVLASTNNRVYPTLDEYGIDYLILSA
NTDYSSFEECRECSTRQESPQVMCTPSITQSCTHDRTGAQQKSYISDLFF
KQADPDAVDSGLIKHRVVVIDSYIQEGFSVPTKSFTLIGEHELFGKTTLQ
KAPRISRRAIDPINLAIDDYVVHEIHGIARFKGMCSRRPKHDAPEQEYLI
LEYAKNRLGVADKLYIPTDQLSMISKYIGSDRPTLSRIGGSDWALTKSRA
RKAISSIALDLVKLYSRRSITKGYAFSPDTPFQTHFENEFLYTETRDQEK
TIVAVKADMENSKPMDRIISGDVGFGKTEIAMRAAFKAVQDNKQVAVLVP
TTLLARQHIQTFCERFDKWPVTIASLSRFQSKSEIQKTICGISSGGIDIV
IGTHMLLNKKIQFKDLGLLIIDEEHRFGVNHKEAIKKLKIGIDILAMSAT
PIPRTLEMSLMGIKEISTLSTPPENRMPILTHVGPYRDKQVIAAVRREII
RGGQVFYIHNDTATISRVAQRLEQLIPEARVVSAHAKLAERMLEKTVIDF
WEGKYDILVCTTIIETGLDNANANTIIIDSAENYGLSQLHQLRGRVGRGT
KRAYAYLFYTSTLKDTAYKRLEAIARNNHLGAGAQIAMKDLELRGAGSLL
GHAQSGHIASVGFDLYIRMVTDAISNFKGEQSRTNNLRLEIPVDASIPKA
YVDSERLRIELYKKISEALSDADIKDIGDEILDRFGNLPSQVINLLELAR
LRILASSRGIDLITLKSDFRQGGDVVTVSPVSFSDTAHQNLLRDGQFSFI
CYRNSKLSACINRSSSEHSGYSEHSAQIINSIRHFIITSCN