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2024-05-10 20:32:14

Gene list

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COG category: Transcription
Organism: Tropheryma whipplei str. Twist, twist

Number of genes found: 28

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei str. Twist, twist
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TWT597 putative serine/threonine-protein kinaseSubName: Full=Putative serine/threonine-protein kinase; EC=2.7.1.-; chromosome CDS689321 1197 - 0.444444
NA TWT047 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS46222 756 - 0.478836
NA TWT728 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS839340 1164 + 0.480241
NA TWT112 iron-dependent repressor ideRSubName: Full=Iron-dependent repressor ideR; chromosome CDS131315 681 + 0.443466
NA TWT118 DNA helicaseSubName: Full=DNA helicase; chromosome CDS135378 2097 + 0.486886
NA TWT236 unknownSubName: Full=Uncharacterized protein; chromosome CDS320906 477 + 0.486373
NA TWT349 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS433607 483 - 0.484472
NA TWT235 unknownSubName: Full=Uncharacterized protein; chromosome CDS320186 678 + 0.432153
NA TWT237 transcriptional regulatorRecName: Full=Transcriptional repressor NrdR; chromosome CDS321383 444 + 0.472973
NA TWT061 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS62223 348 + 0.408046
capB TWT048 cold shock protein BSubName: Full=Cold shock protein B; chromosome CDS47170 378 + 0.505291
glkA TWT213 glucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS297460 945 + 0.461376
greA TWT680 transcription elongation factorSubName: Full=Transcription elongation factor; chromosome CDS792682 519 + 0.495183
hspR TWT747 heat shock regulatorSubName: Full=Heat shock regulator; chromosome CDS858066 393 - 0.493639
nusA TWT156 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS193438 960 + 0.488542
nusG TWT715 transcription antitermination proteinRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS827492 654 - 0.461774
parB TWT801 chromosome partitioning protein ParBSubName: Full=Chromosome partitioning protein ParB; chromosome CDS920875 897 - 0.507246
pknA TWT777 serine/threonine-protein kinaseSubName: Full=Serine/threonine-protein kinase; EC=2.7.1.-; chromosome CDS893838 1758 + 0.506826
recG TWT566 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS658215 2307 - 0.465106
relA TWT275 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS357230 2238 + 0.442359
rho TWT436 transcription termination factor RhoSubName: Full=Transcription termination factor Rho; chromosome CDS527877 1365 - 0.497436
rnc TWT562 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS655225 672 - 0.458333
rpoA TWT528 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS635082 984 - 0.474593
rpoB TWT071 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS73769 3567 + 0.506308
rpoC TWT072 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS77362 3861 + 0.488734
rpoD TWT499 RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS595789 1164 - 0.512887
rpoZ TWT362 DNA-directed RNA polymerase omega chainRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS447927 297 - 0.447811
trcF TWT182 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS228490 3876 + 0.432147