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2024-05-06 12:48:20

Gene list

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COG category: Transcription
Organism: Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334

Number of genes found: 146

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Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SP_1714 transcriptional regulator, GntR familychromosome CDS1617465 366 + 0.418033
NA SP_1933 hypothetical proteinchromosome CDS1837532 795 - 0.338365
NA SP_1943 acetyltransferase, GNAT familychromosome CDS1846999 519 - 0.414258
NA SP_0927 transcriptional regulator, LysR familychromosome CDS879942 909 + 0.40484
NA SP_1520 acetyltransferase, GNAT familychromosome CDS1427588 465 - 0.415054
NA SP_1920 transcriptional regulator, MarR familychromosome CDS1829726 450 - 0.42
NA SP_1674 putative phosphosugar-binding transcriptional regulatorchromosome CDS1575253 852 + 0.410798
NA SP_1203 putative transcriptional repressorchromosome CDS1136890 432 - 0.372685
NA SP_1936 putative type II restriction-modification system regulatory proteinchromosome CDS1839886 162 - 0.290123
NA SP_0950 acetyltransferase, GNAT familychromosome CDS898939 501 + 0.373253
NA SP_1061 putative protein kinasechromosome CDS996190 1347 + 0.27023
NA SP_1856 transcriptional regulator, MerR familychromosome CDS1763982 354 - 0.392655
NA SP_1523 Snf2 family proteinchromosome CDS1430072 3099 - 0.440142
NA SP_0100 conserved hypothetical proteinchromosome CDS101780 327 - 0.422018
NA SP_0584 putative transcriptional regulatorchromosome CDS553626 213 + 0.446009
NA SP_0141 transcriptional regulatorchromosome CDS139839 864 + 0.398148
NA SP_2032 transcriptional regulator, BglG familychromosome CDS1938321 1674 - 0.329749
NA SP_0761 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS719900 1344 + 0.406994
NA SP_0161 conserved domain proteinchromosome CDS158319 441 - 0.401361
NA SP_0163 putative transcriptional regulator PlcRchromosome CDS159192 867 + 0.327566
NA SP_1516 acetyltransferase, GNAT familychromosome CDS1423902 429 - 0.365967
NA SP_0247 transcriptional regulatorchromosome CDS216751 981 + 0.303772
NA SP_1612 conserved domain proteinchromosome CDS1512877 993 + 0.29708
NA SP_1019 acetyltransferase, GNAT familychromosome CDS962963 480 + 0.304167
NA SP_1636 Rrf2 family proteinchromosome CDS1535882 438 - 0.438356
NA SP_2062 transcriptional regulator, MarR familychromosome CDS1962886 426 - 0.406103
NA SP_1863 transcriptional regulator, MarR familychromosome CDS1770480 444 - 0.403153
NA SP_0580 acetyltransferase, GNAT familychromosome CDS548815 510 + 0.372549
NA SP_1050 putative transcriptional regulatorchromosome CDS988052 477 + 0.331237
NA SP_1464 acetyltransferase, GNAT familychromosome CDS1378181 495 - 0.424242
NA SP_0739 transcriptional regulator, MerR familychromosome CDS701499 741 + 0.425101
NA SP_0992 conserved hypothetical proteinchromosome CDS935305 492 + 0.380081
NA SP_0376 DNA-binding response regulatorchromosome CDS355159 690 + 0.424638
NA SP_2077 putative transcriptional repressorchromosome CDS1987541 447 - 0.373602
NA SP_2020 transcriptional regulator, GntR familychromosome CDS1925563 729 - 0.351166
NA SP_1858 transcriptional regulator, TetR familychromosome CDS1765602 537 + 0.424581
NA SP_0743 transcriptional regulator, TetR familychromosome CDS704947 558 + 0.390681
NA SP_0893 putative transcriptional repressorchromosome CDS843981 471 - 0.424628
NA SP_1675 ROK family proteinchromosome CDS1576120 885 - 0.431638
NA SP_1989 putative transcriptional regulator PlcRchromosome CDS1892864 900 - 0.332222
NA SP_0416 transcriptional regulator, MarR familychromosome CDS395224 435 + 0.395402
NA SP_1423 putative transcriptional repressorchromosome CDS1343684 240 - 0.416667
NA SP_0676 putative transcriptional regulatorchromosome CDS650815 969 - 0.442724
NA SP_1915 hypothetical proteinchromosome CDS1826340 450 - 0.431111
NA SP_0493 putative DNA-directed RNA polymerase, delta subunitchromosome CDS469739 603 + 0.422886
NA SP_2000 DNA-binding response regulatorchromosome CDS1903749 600 - 0.436667
NA SP_1057 putative transcriptional regulator PlcRchromosome CDS993954 867 + 0.314879
NA SP_1446 transcriptional regulator, GntR familychromosome CDS1366429 708 + 0.413842
NA SP_1774 putative transcriptional regulatorchromosome CDS1693715 462 + 0.441558
NA SP_0246 transcriptional regulator, DeoR familychromosome CDS215992 747 + 0.317269
NA SP_0554 conserved hypothetical proteinchromosome CDS522522 294 + 0.428571
NA SP_1592 conserved domain proteinchromosome CDS1497699 204 + 0.348039
NA SP_1483 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1395293 1083 + 0.409049
NA SP_0083 DNA-binding response regulatorchromosome CDS89038 699 + 0.416309
NA SP_0802 DNA polymerase III, epsilon subunit/ATP-dependent helicase DinGchromosome CDS755550 2451 + 0.402693
NA SP_0333 putative transcriptional regulatorchromosome CDS305237 195 - 0.441026
NA SP_1023 acetyltransferase, GNAT familychromosome CDS965958 432 + 0.395833
NA SP_0387 DNA-binding response regulatorchromosome CDS366900 633 + 0.467615
NA SP_2090 transcriptional regulatorchromosome CDS1998138 441 - 0.337868
NA SP_1519 acetyltransferase, GNAT familychromosome CDS1427097 495 - 0.420202
NA SP_1115 putative transcriptional regulator MutRchromosome CDS1044704 864 + 0.371528
NA SP_0910 conserved hypothetical proteinchromosome CDS863462 273 + 0.406593
NA SP_1324 putative regulatory proteinchromosome CDS1247213 891 - 0.329966
NA SP_2193 DNA-binding response regulatorchromosome CDS2114113 654 - 0.363914
NA SP_1030 conserved hypothetical proteinchromosome CDS972795 219 + 0.305936
NA SP_0395 putative transcriptional regulatorchromosome CDS374103 1956 + 0.353783
NA SP_1946 putative transcriptional regulator PlcRchromosome CDS1849039 864 - 0.329861
NA SP_2119 putative transcriptional regulatorchromosome CDS2031477 216 - 0.449074
NA SP_0058 transcriptional regulator, GntR familychromosome CDS63890 717 - 0.375174
NA SP_1713 conserved hypothetical proteinchromosome CDS1616852 474 - 0.424051
NA SP_0171 ROK family proteinchromosome CDS165235 234 + 0.346154
NA SP_1130 transcriptional regulatorchromosome CDS1064469 849 - 0.282686
NA SP_0908 putative transcriptional regulatorchromosome CDS860839 2130 + 0.429577
NA SP_1227 DNA-binding response regulatorchromosome CDS1159455 705 - 0.417021
NA SP_0975 exoribonuclease, VacB/Rnb familychromosome CDS919826 2355 + 0.420807
NA SP_1942 putative transcriptional regulatorchromosome CDS1845975 1017 - 0.383481
NA SP_1433 transcriptional regulator, AraC familychromosome CDS1351451 993 - 0.29003
NA SP_0501 transcriptional regulator, MerR familychromosome CDS483534 357 + 0.422969
NA SP_0473 putative regulatorchromosome CDS450739 1224 - 0.338235
NA SP_2082 response regulatorchromosome CDS1991241 708 + 0.415254
NA SP_0727 putative transcriptional repressorchromosome CDS691619 402 + 0.410448
NA SP_1821 sugar-binding transcriptional regulator, LacI familychromosome CDS1731967 1002 - 0.313373
NA SP_1331 putative phosphosugar-binding transcriptional regulatorchromosome CDS1255327 810 - 0.34321
NA SP_1368 psr proteinchromosome CDS1291188 1275 - 0.413333
NA SP_0575 putative helicasechromosome CDS541218 1647 + 0.379478
NA SP_1131 putative transcriptional regulatorchromosome CDS1065437 354 + 0.322034
NA SP_2240 spspoJ proteinchromosome CDS2160068 759 + 0.350461
NA SP_1638 iron-dependent transcriptional regulatorchromosome CDS1537349 651 + 0.44086
NA SP_1083 conserved hypothetical proteinchromosome CDS1019038 1278 + 0.406886
NA SP_1077 conserved domain proteinchromosome CDS1014165 177 + 0.435028
NA SP_1393 conserved hypothetical proteinchromosome CDS1316756 1272 + 0.43239
NA SP_0716 putative transcriptional regulatorchromosome CDS682123 669 + 0.406577
NA SP_2234 transcriptional regulator, TetR familychromosome CDS2154880 543 + 0.325967
NA SP_0951 conserved hypothetical proteinchromosome CDS899442 228 + 0.377193
NA SP_2142 ROK family proteinchromosome CDS2052446 870 - 0.473563
NA SP_1799 sugar-binding transcriptional regulator, LacI familychromosome CDS1715315 1002 - 0.334331
NA SP_0306 putative transcriptional regulatorchromosome CDS279127 1482 + 0.31309
NA SP_0926 hypothetical proteinchromosome CDS879752 198 - 0.29798
NA SP_1144 conserved hypothetical proteinchromosome CDS1071640 294 + 0.397959
NA SP_1633 DNA-binding response regulatorchromosome CDS1533515 678 - 0.427729
NA SP_0256 acetyltransferase, GNAT familychromosome CDS228155 417 + 0.395683
NA SP_2168 putative fucose operon repressorchromosome CDS2084884 774 + 0.339793
NA SP_1737 putative DNA-directed RNA polymerase, omega subunitchromosome CDS1642146 312 - 0.400641
NA SP_1800 putative transcriptional activatorchromosome CDS1716678 1482 - 0.296896
NA SP_0789 conserved hypothetical proteinchromosome CDS744248 321 + 0.401869
NA SP_1586 putative ATP-dependent RNA helicasechromosome CDS1489766 1575 - 0.435556
NA SP_1236 acetyltransferase, GNAT familychromosome CDS1167286 489 - 0.347648
NA SP_1344 conserved hypothetical proteinchromosome CDS1267611 2610 - 0.326437
adcR SP_2172 adc operon repressor AdcRchromosome CDS2089835 441 - 0.424036
blpR SP_0526 response regulator BlpRchromosome CDS505561 738 + 0.433604
blpS SP_0525 BlpS proteinchromosome CDS505218 339 + 0.342183
ccpA SP_1999 catabolite control protein Achromosome CDS1902314 1011 - 0.409496
ciaR SP_0798 DNA-binding response regulator CiaRchromosome CDS751962 675 + 0.377778
codY SP_1584 GTP-sensing transcriptional pleiotropic repressor CodYchromosome CDS1488714 789 - 0.400507
comE SP_2235 response regulator ComEchromosome CDS2155665 753 - 0.306773
cps4A SP_0346 capsular polysaccharide biosynthesis protein Cps4Achromosome CDS320077 1446 + 0.383126
ctsR SP_2195 transcriptional regulator CtsRchromosome CDS2117842 459 - 0.429194
galR SP_1854 galactose operon repressorchromosome CDS1761891 1008 + 0.463294
gki SP_0668 glucokinasechromosome CDS644073 963 + 0.436137
greA SP_1517 transcription elongation factor GreAchromosome CDS1424808 483 - 0.414079
hrcA SP_0515 heat-inducible transcription repressor HrcAchromosome CDS495411 1035 + 0.438647
lacR-1 SP_0875 lactose phosphotransferase system repressorchromosome CDS822707 741 + 0.418354
lacR-2 SP_1182 lactose phosphotransferase system repressorchromosome CDS1119827 762 + 0.346457
lacT SP_1187 transcription antiterminator LacTchromosome CDS1124828 837 - 0.353644
licT SP_0576 transcription antiterminator Lictchromosome CDS543164 840 + 0.292857
malR SP_2112 maltose operon transcriptional repressorchromosome CDS2025331 987 + 0.422492
mfd SP_0006 transcription-repair coupling factorchromosome CDS4952 3510 + 0.350142
msmR SP_1899 msm operon regulatory proteinchromosome CDS1806745 861 + 0.367015
nusA SP_0553 N utilization substance protein Achromosome CDS521364 1137 + 0.430079
nusB SP_0433 N utilization substance protein Bchromosome CDS407504 423 - 0.432624
nusG SP_2007 transcription antitermination protein NusGchromosome CDS1914735 537 - 0.340782
pavA SP_0966 adherence and virulence protein Achromosome CDS913089 1656 - 0.426329
recG SP_1697 ATP-dependent DNA helicase RecGchromosome CDS1600953 2016 - 0.464782
regR SP_0330 sugar binding transcriptional regulator RegRchromosome CDS302969 1002 + 0.39521
relA SP_1645 GTP pyrophosphokinasechromosome CDS1541751 2223 - 0.45614
rnc SP_1248 ribonuclease IIIchromosome CDS1182520 699 - 0.407725
rpoA SP_0236 DNA-directed RNA polymerase, alpha subunitchromosome CDS206502 936 + 0.378205
rpoB SP_1961 DNA-directed RNA polymerase, beta subunitchromosome CDS1866355 3612 - 0.444629
rpoC SP_1960 DNA-directed RNA polymerase, beta' subunitchromosome CDS1862645 3678 - 0.461664
rpoD SP_1073 RNA polymerase sigma-70 factorchromosome CDS1010183 1110 + 0.432432
scpB SP_1875 segregation and condensation protein Bchromosome CDS1779403 570 - 0.445614
scrK SP_1721 fructokinasechromosome CDS1624067 888 - 0.442568
scrR SP_1725 sucrose operon repressorchromosome CDS1628797 966 + 0.428571
tenA SP_0722 transcriptional activator TenAchromosome CDS687609 693 + 0.396825
treR SP_1885 trehalose operon transcriptional repressorchromosome CDS1788834 711 + 0.420534
vncR SP_0603 DNA-binding response regulator VncRchromosome CDS569482 657 + 0.442922