Gene list
Applied filters:
COG category: Transcription
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 353
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | c5208 | Hypothetical protein ybdM | chromosome | CDS | 4962284 | 564 | - | 0.531915 |
NA | c5191 | Hypothetical protein | chromosome | CDS | 4950188 | 447 | + | 0.521253 |
NA | c5355 | Hypothetical protein | chromosome | CDS | 5097887 | 522 | - | 0.509579 |
NA | c5304 | Putative conserved protein | chromosome | CDS | 5044493 | 720 | + | 0.406944 |
NA | c5025 | Putative regulator | chromosome | CDS | 4800915 | 1062 | + | 0.502825 |
NA | c4779 | Putative transcriptional regulator | chromosome | CDS | 4542201 | 855 | - | 0.521637 |
NA | c5378 | Hypothetical protein | chromosome | CDS | 5123325 | 3279 | - | 0.522415 |
NA | c5295 | Hypothetical protein | chromosome | CDS | 5035027 | 492 | + | 0.45935 |
NA | c4987 | Putative transcriptional regulator of sorbose uptake and utilization genes | chromosome | CDS | 4764865 | 1032 | - | 0.491279 |
NA | c5346 | Hypothetical protein | chromosome | CDS | 5089697 | 555 | - | 0.414414 |
NA | c5379 | Hypothetical protein | chromosome | CDS | 5126603 | 906 | - | 0.551876 |
NA | c5192 | Conserved hypothetical protein | chromosome | CDS | 4950287 | 234 | - | 0.521368 |
NA | c5207 | Hypothetical protein | chromosome | CDS | 4962202 | 156 | - | 0.564103 |
NA | c5058 | Putative transcriptional regulator | chromosome | CDS | 4834225 | 885 | - | 0.500565 |
NA | c5160 | Hypothetical transcriptional regulator yfjR | chromosome | CDS | 4927861 | 681 | - | 0.500734 |
NA | c4838 | Hypothetical protein | chromosome | CDS | 4602054 | 291 | + | 0.487972 |
acrR | Potential acrAB operon repressor | chromosome | CDS | 560411 | 648 | + | 0.458333 | |
adiY | c5121 | Putative Regulatory protein adiY | chromosome | CDS | 4895704 | 762 | - | 0.417323 |
agaR | Putative aga operon transcriptional repressor | chromosome | CDS | 3715175 | 810 | - | 0.517284 | |
alpA | Prophage CP4-57 Regulatory protein alpA | chromosome | CDS | 1132071 | 249 | + | 0.441767 | |
araC | Arabinose operon Regulatory protein | chromosome | CDS | 72901 | 846 | + | 0.529551 | |
arcA | Aerobic respiration control protein arcA | chromosome | CDS | 5229366 | 717 | - | 0.506276 | |
argR | Arginine repressor | chromosome | CDS | 3808184 | 471 | + | 0.481953 | |
asnC | Regulatory protein asnC | chromosome | CDS | 4427578 | 459 | - | 0.488017 | |
baeR | Transcriptional Regulatory protein baeR | chromosome | CDS | 2450862 | 723 | + | 0.538036 | |
basR | c5118 | Transcriptional Regulatory protein basR/pmrA | chromosome | CDS | 4891818 | 669 | - | 0.539611 |
betI | Regulatory protein betI | chromosome | CDS | 419239 | 606 | - | 0.559406 | |
bglG | Cryptic beta-glucoside bgl operon Antiterminator | chromosome | CDS | 4406856 | 861 | - | 0.430894 | |
bglJ | Transcriptional activator protein bglJ | chromosome | CDS | 5193149 | 678 | + | 0.446903 | |
c0306 | Conserved hypothetical protein | chromosome | CDS | 282559 | 207 | - | 0.555556 | |
c0310 | Hypothetical protein | chromosome | CDS | 286352 | 390 | + | 0.55641 | |
c0317 | Conserved hypothetical protein | chromosome | CDS | 288649 | 138 | + | 0.463768 | |
c0330 | Putative deoxyribose operon repressor | chromosome | CDS | 300643 | 786 | - | 0.461832 | |
c0337 | Putative conserved protein | chromosome | CDS | 308229 | 1032 | + | 0.467054 | |
c0365 | Hypothetical protein | chromosome | CDS | 346408 | 531 | + | 0.297552 | |
c0392 | Hypothetical protein | chromosome | CDS | 371227 | 525 | - | 0.306667 | |
c0411 | Putative LysR-like transcriptional regulator | chromosome | CDS | 391165 | 990 | + | 0.425253 | |
c0412 | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 392279 | 969 | + | 0.499484 | |
c0428 | Conserved hypothetical protein | chromosome | CDS | 413296 | 705 | - | 0.483688 | |
c0435 | Hypothetical protein yahA | chromosome | CDS | 422858 | 1095 | + | 0.454795 | |
c0503 | Hypothetical protein yajF | chromosome | CDS | 484051 | 1047 | + | 0.538682 | |
c0689 | Hypothetical protein ybdM | chromosome | CDS | 676750 | 630 | - | 0.463492 | |
c0765 | Putative transcriptional regulator | chromosome | CDS | 746931 | 762 | + | 0.503937 | |
c0903 | Transcriptional regulator mntR | chromosome | CDS | 875537 | 468 | + | 0.540598 | |
c0934 | Hypothetical protein | chromosome | CDS | 911434 | 927 | - | 0.380798 | |
c0943 | Hypothetical protein | chromosome | CDS | 917799 | 306 | + | 0.454248 | |
c1546 | Repressor protein | chromosome | CDS | 1412427 | 423 | - | 0.472813 | |
c1547 | Hypothetical protein | chromosome | CDS | 1413040 | 381 | + | 0.427822 | |
c1551 | Putative exclusion protein ren of prophage | chromosome | CDS | 1415485 | 291 | + | 0.501718 | |
c1659 | Glycerol metabolism operon Regulatory protein | chromosome | CDS | 1494264 | 1929 | + | 0.516848 | |
c1760 | Putative transcriptional repressor | chromosome | CDS | 1595709 | 666 | + | 0.457958 | |
c1802 | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 1635277 | 900 | + | 0.468889 | |
c1810 | Hypothetical protein | chromosome | CDS | 1642836 | 816 | - | 0.458333 | |
c1874 | Putative conserved protein | chromosome | CDS | 1709348 | 237 | + | 0.476793 | |
c1960 | Putative conserved protein | chromosome | CDS | 1801647 | 699 | + | 0.410587 | |
c2206 | Hypothetical protein | chromosome | CDS | 2038120 | 333 | - | 0.483483 | |
c2212 | Probable ATP-dependent helicase yoaA | chromosome | CDS | 2042997 | 1911 | - | 0.55573 | |
c2236 | Transcriptional regulator kdgR | chromosome | CDS | 2060980 | 792 | - | 0.498737 | |
c2423 | Putataive AraC type regulator | chromosome | CDS | 2225978 | 960 | + | 0.5625 | |
c2484 | Hypothetical protein ybdM | chromosome | CDS | 2324842 | 645 | - | 0.505426 | |
c2492 | Putative carbohydrate kinase | chromosome | CDS | 2331944 | 1215 | + | 0.414815 | |
c2499 | Hypothetical protein | chromosome | CDS | 2338699 | 402 | - | 0.527363 | |
c2615 | Hypothetical protein | chromosome | CDS | 2460998 | 780 | - | 0.466667 | |
c2896 | Hypothetical protein | chromosome | CDS | 2755791 | 621 | - | 0.375201 | |
c3190 | Hypothetical protein | chromosome | CDS | 3056243 | 360 | - | 0.555556 | |
c3192 | Unknown protein encoded by cryptic prophage | chromosome | CDS | 3057060 | 942 | - | 0.527601 | |
c3197 | Putative repressor protein of prophage | chromosome | CDS | 3059233 | 627 | + | 0.433812 | |
c3224 | Conserved hypothetical protein | chromosome | CDS | 3079201 | 1335 | - | 0.521348 | |
c3273 | Hypothetical protein ygjM | chromosome | CDS | 3121577 | 420 | - | 0.464286 | |
c3306 | Hypothetical protein | chromosome | CDS | 3149763 | 519 | - | 0.526012 | |
c3307 | Putative conserved protein | chromosome | CDS | 3150362 | 435 | - | 0.512644 | |
c3397 | Hypothetical protein | chromosome | CDS | 3237749 | 1434 | + | 0.515342 | |
c3409 | Antiterminator | chromosome | CDS | 3253995 | 882 | - | 0.34127 | |
c3565 | Putative response regulator | chromosome | CDS | 3414691 | 723 | - | 0.466113 | |
c3600 | Hypothetical protein | chromosome | CDS | 3442798 | 561 | + | 0.411765 | |
c3638 | Hypothetical protein yhcI | chromosome | CDS | 3477696 | 876 | - | 0.406393 | |
c3650 | Hypothetical protein | chromosome | CDS | 3486747 | 261 | + | 0.528736 | |
c3750 | Putative regulator | chromosome | CDS | 3583042 | 750 | + | 0.445333 | |
c3770 | Hypothetical protein | chromosome | CDS | 3603039 | 888 | - | 0.516892 | |
c3819 | Putative conserved protein | chromosome | CDS | 3653641 | 1107 | + | 0.523035 | |
c3840 | Hypothetical protein ygjM | chromosome | CDS | 3674123 | 417 | - | 0.484412 | |
c3976 | Hypothetical protein yhcI | chromosome | CDS | 3794637 | 909 | - | 0.579758 | |
c4020 | Hypothetical protein | chromosome | CDS | 3837253 | 831 | + | 0.480144 | |
c4179 | Hypothetical protein yiaG | chromosome | CDS | 3961054 | 297 | + | 0.451178 | |
c4276 | Putative regulator | chromosome | CDS | 4057834 | 756 | + | 0.431217 | |
c4375 | Hypothetical protein yiaG | chromosome | CDS | 4158515 | 291 | + | 0.443299 | |
c4423 | Conserved hypothetical protein | chromosome | CDS | 4205257 | 684 | + | 0.394737 | |
c4482 | Hypothetical protein yajF | chromosome | CDS | 4263738 | 966 | - | 0.528986 | |
c4488 | Putative transcriptional Antiterminator | chromosome | CDS | 4268467 | 1599 | - | 0.412133 | |
c4494 | Putative transcriptional regulator | chromosome | CDS | 4277738 | 1095 | - | 0.432877 | |
c4549 | Hypothetical protein | chromosome | CDS | 4326878 | 210 | - | 0.314286 | |
c4550 | Hypothetical protein | chromosome | CDS | 4327162 | 570 | - | 0.401754 | |
c4556 | Conserved hypothetical protein | chromosome | CDS | 4329644 | 234 | - | 0.508547 | |
c4566 | Hypothetical transcriptional regulator yfjR | chromosome | CDS | 4335521 | 681 | + | 0.502203 | |
c4616 | Hypothetical protein | chromosome | CDS | 4376208 | 690 | - | 0.547826 | |
c4760 | Hypothetical protein | chromosome | CDS | 4526160 | 846 | - | 0.407801 | |
c4761 | Putative conserved protein | chromosome | CDS | 4527206 | 906 | - | 0.460265 | |
c5477 | Hypothetical protein | chromosome | CDS | 5218354 | 285 | + | 0.431579 | |
cadC | c5142 | Transcriptional activator cadC | chromosome | CDS | 4917294 | 1539 | - | 0.421702 |
cbl | Transcriptional regulator cbl | chromosome | CDS | 2259937 | 951 | + | 0.483701 | |
celD | Cel operon repressor | chromosome | CDS | 1972449 | 843 | - | 0.410439 | |
citB | Transcriptional Regulatory protein dpiA | chromosome | CDS | 694455 | 681 | + | 0.509545 | |
cobB | CobB protein | chromosome | CDS | 1323747 | 822 | + | 0.510949 | |
cpxR | c4864 | Transcriptional Regulatory protein cpxR | chromosome | CDS | 4624630 | 699 | - | 0.516452 |
creB | Transcriptional Regulatory protein creB | chromosome | CDS | 5225783 | 690 | + | 0.546377 | |
csgD | Probable csgAB operon transcriptional Regulatory protein | chromosome | CDS | 1246045 | 651 | - | 0.417819 | |
csiE | Stationary phase inducible protein csiE | chromosome | CDS | 2933414 | 1302 | + | 0.518433 | |
cspA | Cold shock protein cspA | chromosome | CDS | 4159086 | 213 | + | 0.488263 | |
cspB | Cold shock-like protein cspB | chromosome | CDS | 3052133 | 216 | - | 0.347222 | |
cspC | Cold shock-like protein cspC | chromosome | CDS | 2058898 | 210 | - | 0.461905 | |
cspD | Cold shock-like protein cspD | chromosome | CDS | 976495 | 255 | - | 0.470588 | |
cspE | Cold shock-like protein cspE | chromosome | CDS | 697799 | 294 | + | 0.42517 | |
cspF | Cold shock-like protein cspF | chromosome | CDS | 3052649 | 213 | + | 0.483568 | |
cspG | Cold shock-like protein cspG | chromosome | CDS | 1086202 | 213 | + | 0.431925 | |
cspH | Cold shock-like protein cspH | chromosome | CDS | 1085704 | 213 | - | 0.474178 | |
cspI | Cold shock-like protein cspI | chromosome | CDS | 3048683 | 216 | - | 0.402778 | |
cusR | Transcriptional Regulatory protein cusR | chromosome | CDS | 638381 | 684 | - | 0.545322 | |
cysB | Cys regulon transcriptional activator | chromosome | CDS | 1578166 | 975 | + | 0.485128 | |
cytR | c4887 | Transcriptional repressor cytR | chromosome | CDS | 4643125 | 1026 | - | 0.516569 |
dbpA | ATP-independent RNA helicase dbpA | chromosome | CDS | 1648163 | 1374 | + | 0.517467 | |
deaD | Cold-shock DEAD-box protein A | chromosome | CDS | 3739604 | 1956 | - | 0.551125 | |
deoR | Deoxyribose operon repressor | chromosome | CDS | 902870 | 759 | - | 0.503294 | |
dinG | Probable ATP-dependent helicase dinG | chromosome | CDS | 855392 | 2151 | + | 0.543933 | |
dsdC | D-serine deaminase activator | chromosome | CDS | 2759070 | 954 | - | 0.472746 | |
ebgR | Ebg operon repressor | chromosome | CDS | 3662061 | 984 | + | 0.511179 | |
emrR | Transcriptional repressor mprA | chromosome | CDS | 3091317 | 531 | + | 0.497175 | |
envR | Potential acrEF/envCD operon repressor | chromosome | CDS | 3844571 | 663 | - | 0.435897 | |
evgA | Positive transcription regulator evgA | chromosome | CDS | 2766143 | 615 | + | 0.396748 | |
exuR | Exu regulon transcriptional regulator | chromosome | CDS | 3686633 | 792 | + | 0.510101 | |
fadR | Fatty acid metabolism regulator protein | chromosome | CDS | 1472254 | 720 | + | 0.509722 | |
fhlA | Formate hydrogenlyase transcriptional activator | chromosome | CDS | 3134994 | 2115 | + | 0.518203 | |
fis | DNA-binding protein fis | chromosome | CDS | 3843039 | 297 | + | 0.468013 | |
flgM | Negative regulator of flagellin synthesis | chromosome | CDS | 1273338 | 294 | - | 0.530612 | |
fliA | RNA polymerase sigma factor for flagellar operon | chromosome | CDS | 2150458 | 720 | - | 0.543056 | |
focX | Putative Regulatory protein | chromosome | CDS | 1196018 | 552 | + | 0.38587 | |
fruR | Fructose repressor | chromosome | CDS | 91855 | 1005 | + | 0.551244 | |
fucR | L-fucose operon activator | chromosome | CDS | 3214225 | 741 | + | 0.479082 | |
galR | Galactose operon repressor | chromosome | CDS | 3284632 | 1032 | + | 0.530039 | |
galS | Mgl repressor and galactose ultrainduction factor | chromosome | CDS | 2532323 | 1047 | - | 0.516714 | |
gcvA | Glycine cleavage system transcriptional activator | chromosome | CDS | 3216516 | 918 | - | 0.496732 | |
glcC | Glc operon transcriptional activator | chromosome | CDS | 3542871 | 825 | + | 0.546667 | |
glpR | Glycerol-3-phosphate regulon repressor | chromosome | CDS | 3986472 | 810 | - | 0.528395 | |
gntR | Gluconate utilization system GNT-I transcriptional repressor | chromosome | CDS | 4017143 | 996 | - | 0.543173 | |
greA | Transcription elongation factor greA | chromosome | CDS | 3761871 | 477 | - | 0.486373 | |
greB | Transcription elongation factor greB | chromosome | CDS | 3963641 | 513 | + | 0.497076 | |
gutM | Glucitol operon activator protein | chromosome | CDS | 3111091 | 360 | + | 0.538889 | |
hepA | RNA polymerase associated protein | chromosome | CDS | 62160 | 2907 | - | 0.55074 | |
hipB | Protein hipB | chromosome | CDS | 1783191 | 285 | - | 0.45614 | |
hypB | Hydrogenase isoenzymes nickel incorporation protein hypB | chromosome | CDS | 3131693 | 873 | + | 0.556701 | |
iciA | Chromosome initiation inhibitor | chromosome | CDS | 3355639 | 960 | + | 0.5375 | |
iclR | c4975 | Acetate operon repressor | chromosome | CDS | 4751557 | 885 | - | 0.533333 |
idnR | c5365 | L-idonate Regulatory protein | chromosome | CDS | 5109075 | 1029 | - | 0.47036 |
ilvY | Transcriptional activator protein ilvY | chromosome | CDS | 4457912 | 975 | - | 0.553846 | |
kdpE | KDP operon transcriptional Regulatory protein kdpE | chromosome | CDS | 761791 | 678 | - | 0.569322 | |
leuO | Probable activator protein in leuABCD operon | chromosome | CDS | 88195 | 945 | + | 0.462434 | |
lexA | c5014 | LexA repressor | chromosome | CDS | 4789145 | 609 | + | 0.518883 |
lldR | Putative L-lactate dehydrogenase operon Regulatory protein | chromosome | CDS | 4213372 | 792 | + | 0.532828 | |
lrhA | Probable transcriptional regulator lrhA | chromosome | CDS | 2688207 | 939 | - | 0.500533 | |
lrp | Leucine-responsive Regulatory protein | chromosome | CDS | 986669 | 549 | + | 0.471767 | |
lysR | Transcriptional activator protein lysR | chromosome | CDS | 3287054 | 936 | + | 0.532051 | |
malI | Maltose regulon Regulatory protein malI | chromosome | CDS | 1858673 | 1029 | - | 0.544218 | |
malT | MalT Regulatory protein | chromosome | CDS | 3979709 | 2706 | + | 0.539542 | |
marA | Multiple antibiotic resistance protein marA | chromosome | CDS | 1795473 | 390 | + | 0.448718 | |
marR | Multiple antibiotic resistance protein marR | chromosome | CDS | 1795024 | 435 | + | 0.491954 | |
matA | Hypothetical protein ykgK | chromosome | CDS | 385866 | 591 | - | 0.397631 | |
melR | c5123 | Melibiose operon Regulatory protein | chromosome | CDS | 4899267 | 909 | - | 0.50275 |
metJ | c4891 | Met repressor | chromosome | CDS | 4647648 | 456 | - | 0.5 |
metR | Transcriptional activator protein metR | chromosome | CDS | 4516282 | 954 | - | 0.557652 | |
mfd | Transcription-repair coupling factor | chromosome | CDS | 1315400 | 2856 | - | 0.545518 | |
mlc | Mlc protein | chromosome | CDS | 1828051 | 1221 | - | 0.520066 | |
mtlR | Mannitol operon repressor | chromosome | CDS | 4203245 | 588 | + | 0.5 | |
nac | Nitrogen assimilation Regulatory protein nac | chromosome | CDS | 2258888 | 948 | + | 0.488397 | |
nagC | N-acetylglucosamine repressor | chromosome | CDS | 733108 | 1221 | - | 0.528256 | |
narL | Nitrate/nitrite response regulator protein narL | chromosome | CDS | 1513979 | 717 | - | 0.514644 | |
narP | Nitrate/nitrite response regulator protein narP | chromosome | CDS | 2578154 | 678 | + | 0.514749 | |
nhaR | Transcriptional activator protein nhaR | chromosome | CDS | 22058 | 924 | + | 0.472944 | |
nlp | Sugar fermentation stimulation protein B | chromosome | CDS | 3768402 | 279 | + | 0.498208 | |
nrfB | c5067 | Cytochrome c-type protein nrfB precursor | chromosome | CDS | 4842523 | 573 | + | 0.541012 |
nusA | N utilization substance protein A | chromosome | CDS | 3749672 | 1488 | - | 0.525538 | |
nusB | N utilization substance protein B | chromosome | CDS | 509190 | 420 | + | 0.542857 | |
nusG | c4937 | Transcription antitermination protein nusG | chromosome | CDS | 4709991 | 546 | + | 0.512821 |
ompR | Transcriptional Regulatory protein ompR | chromosome | CDS | 3962730 | 720 | - | 0.55 | |
oprR | Hypothetical transcriptional regulator ycjZ | chromosome | CDS | 1780528 | 948 | + | 0.490506 | |
oxyR | c4922 | Hydrogen peroxide-inducible genes activator | chromosome | CDS | 4688221 | 963 | + | 0.553479 |
papI | PapI protein | chromosome | CDS | 3438457 | 234 | + | 0.470085 | |
papI_2 | c5189 | PapI protein | chromosome | CDS | 4949723 | 222 | + | 0.477477 |
papX | PapX protein | chromosome | CDS | 3428779 | 552 | - | 0.380435 | |
pdhR | Pyruvate dehydrogenase complex repressor | chromosome | CDS | 132406 | 798 | + | 0.551378 | |
phnF | c5108 | Probable transcriptional regulator phnF | chromosome | CDS | 4880737 | 735 | - | 0.616327 |
phnO | c5099 | PhnO protein | chromosome | CDS | 4874144 | 435 | - | 0.572414 |
phoB | Phosphate regulon transcriptional Regulatory protein phoB | chromosome | CDS | 491208 | 690 | + | 0.543478 | |
phoP | Transcriptional Regulatory protein phoP | chromosome | CDS | 1390669 | 672 | - | 0.47619 | |
prpR | Propionate catabolism operon Regulatory protein | chromosome | CDS | 436509 | 1587 | - | 0.551985 | |
pspA | Phage shock protein A | chromosome | CDS | 1610758 | 669 | + | 0.493274 | |
pspC | Phage shock protein C | chromosome | CDS | 1611704 | 360 | + | 0.494444 | |
pspF | Psp operon transcriptional activator | chromosome | CDS | 1609615 | 993 | - | 0.517623 | |
purR | Purine nucleotide synthesis repressor | chromosome | CDS | 1893982 | 1026 | + | 0.533138 | |
rbsR | Ribose operon repressor | chromosome | CDS | 4439260 | 993 | + | 0.498489 | |
rcsA | Colanic acid capsular biosynthesis activation protein A | chromosome | CDS | 2175737 | 624 | + | 0.384615 | |
rcsB | Capsular synthesis regulator component B | chromosome | CDS | 2603099 | 696 | + | 0.469828 | |
recG | ATP-dependent DNA helicase recG | chromosome | CDS | 4256179 | 2115 | + | 0.569267 | |
relA | GTP pyrophosphokinase | chromosome | CDS | 3186235 | 2235 | - | 0.536913 | |
rfaH | c4789 | Transcriptional activator rfaH | chromosome | CDS | 4550185 | 489 | - | 0.492843 |
rfaP | Lipopolysaccharide core biosynthesis protein rfaP | chromosome | CDS | 4236156 | 807 | - | 0.478315 | |
rhaR | c4856 | L-rhamnose operon transcriptional activator rhaR | chromosome | CDS | 4618192 | 960 | + | 0.496875 |
rhaS | c4855 | L-rhamnose operon Regulatory protein rhaS | chromosome | CDS | 4617393 | 837 | + | 0.51135 |
rhlB | Putative ATP-dependent RNA helicase rhlB | chromosome | CDS | 4464529 | 1266 | - | 0.522117 | |
rhlE | Putative ATP-dependent RNA helicase rhlE | chromosome | CDS | 853494 | 1362 | + | 0.563142 | |
rho | Transcription termination factor rho | chromosome | CDS | 4466509 | 1332 | + | 0.501502 | |
rnb | Exoribonuclease II | chromosome | CDS | 1591268 | 1935 | - | 0.531266 | |
rnc | Ribonuclease III | chromosome | CDS | 2966250 | 681 | - | 0.503671 | |
rnk | Regulator of nucleoside diphosphate kinase | chromosome | CDS | 684149 | 411 | - | 0.549878 | |
rob | Right origin-binding protein | chromosome | CDS | 5224217 | 870 | - | 0.522988 | |
rpiR | c5095 | Protein rpiR | chromosome | CDS | 4871260 | 924 | - | 0.480519 |
rpoA | DNA-directed RNA polymerase alpha chain | chromosome | CDS | 3871416 | 990 | - | 0.522222 | |
rpoB | c4944 | DNA-directed RNA polymerase beta chain | chromosome | CDS | 4713339 | 4062 | + | 0.525357 |
rpoC | c4945 | DNA-directed RNA polymerase beta' chain | chromosome | CDS | 4717477 | 4224 | + | 0.537169 |
rpoD | RpoD protein | chromosome | CDS | 3654744 | 741 | + | 0.541161 | |
rpoE | RNA polymerase sigma-E factor | chromosome | CDS | 2972304 | 609 | - | 0.487685 | |
rpoH | RNA polymerase sigma-32 factor | chromosome | CDS | 4038422 | 855 | - | 0.534503 | |
rpoN | RNA polymerase sigma-54 factor | chromosome | CDS | 3778210 | 1434 | + | 0.528591 | |
rpoZ | DNA-directed RNA polymerase omega chain | chromosome | CDS | 4253108 | 276 | + | 0.532609 | |
rstA | Transcriptional Regulatory protein rstA | chromosome | CDS | 1842794 | 780 | + | 0.483333 | |
rtcR | Transcriptional Regulatory protein rtcR | chromosome | CDS | 3984892 | 1599 | + | 0.551595 | |
sdiA | Regulatory protein sdiA | chromosome | CDS | 2144786 | 735 | - | 0.459864 | |
sfaC | Putative F1C and S fimbrial switch Regulatory protein | chromosome | CDS | 1186872 | 285 | - | 0.438596 | |
slyA | Transcriptional regulator slyA | chromosome | CDS | 1880919 | 441 | - | 0.473923 | |
sohA | HtrA suppressor protein | chromosome | CDS | 3714321 | 336 | + | 0.47619 | |
soxR | c5054 | Redox-sensitive transcriptional activator soxR | chromosome | CDS | 4830028 | 465 | + | 0.511828 |
soxS | c5053 | Regulatory protein soxS | chromosome | CDS | 4829619 | 324 | - | 0.515432 |
spoT | Guanosine-3',5'-bis(Diphosphate)3'-pyrophosphohy drolase | chromosome | CDS | 4253402 | 2109 | + | 0.538644 | |
srlR | Glucitol operon repressor | chromosome | CDS | 3111517 | 774 | + | 0.485788 | |
srmB | ATP-dependent RNA helicase srmB | chromosome | CDS | 2975763 | 1335 | + | 0.546816 | |
tdcA | Tdc operon transcriptional activator | chromosome | CDS | 3705507 | 939 | - | 0.42279 | |
torR | TorCAD operon transcriptional Regulatory protein torR | chromosome | CDS | 1092002 | 693 | - | 0.535354 | |
treR | c5340 | Trehalose operon repressor | chromosome | CDS | 5083373 | 948 | - | 0.544304 |
trpR | Trp operon repressor | chromosome | CDS | 5222595 | 327 | + | 0.538226 | |
ttk | Ttk protein | chromosome | CDS | 4245450 | 639 | + | 0.522692 | |
tyrR | Transcriptional Regulatory protein tyrR | chromosome | CDS | 1629314 | 1569 | + | 0.519439 | |
uhpA | Transcriptional Regulatory protein uhpA | chromosome | CDS | 4354931 | 591 | - | 0.58714 | |
uidR | Uid operon repressor | chromosome | CDS | 1856975 | 591 | - | 0.505922 | |
umuD | UmuD protein | chromosome | CDS | 1468083 | 420 | + | 0.480952 | |
uvrY | UvrY protein | chromosome | CDS | 2143379 | 657 | - | 0.496195 | |
uxuR | Uxu operon transcriptional regulator | chromosome | CDS | 5149305 | 774 | + | 0.542636 | |
vacB | c5263 | Ribonuclease R | chromosome | CDS | 5014772 | 2484 | + | 0.550725 |
xapR | Xanthosine operon Regulatory protein | chromosome | CDS | 2802472 | 900 | - | 0.507778 | |
xylR | Xylose operon Regulatory protein | chromosome | CDS | 4172612 | 1179 | + | 0.485157 | |
yaeG | Carbohydrate diacid regulator | chromosome | CDS | 193495 | 1176 | + | 0.527211 | |
yaeO | Rof protein | chromosome | CDS | 223712 | 261 | - | 0.490421 | |
yafC | Hypothetical transcriptional regulator yafC | chromosome | CDS | 241368 | 915 | - | 0.491803 | |
yafP | Hypothetical acetyltransferase yafP | chromosome | CDS | 359938 | 453 | + | 0.439294 | |
yahB | Hypothetical transcriptional regulator yahB | chromosome | CDS | 423994 | 933 | - | 0.499464 | |
yaiV | Hypothetical protein yaiV | chromosome | CDS | 468506 | 669 | + | 0.402093 | |
ybaD | Hypothetical protein ybaD | chromosome | CDS | 507055 | 450 | + | 0.511111 | |
ybaO | Hypothetical transcriptional regulator ybaO | chromosome | CDS | 542925 | 567 | + | 0.483245 | |
ybbI | Transcriptional regulator cueR | chromosome | CDS | 588611 | 408 | + | 0.558824 | |
ybbS | Hypothetical transcriptional regulator ybbS | chromosome | CDS | 600096 | 927 | - | 0.522114 | |
ybbU | Negative regulator of allantoin and glyoxylate utilization operons | chromosome | CDS | 601812 | 816 | + | 0.533088 | |
ybcM | Hypothetical transcriptional regulator ybcM | chromosome | CDS | 2162264 | 798 | - | 0.370927 | |
ybdO | Hypothetical transcriptional regulator ybdO | chromosome | CDS | 678719 | 939 | - | 0.371672 | |
ybhD | Hypothetical transcriptional regulator ybhD | chromosome | CDS | 821200 | 1017 | - | 0.444444 | |
ybiH | Hypothetical transcriptional regulator ybiH | chromosome | CDS | 852594 | 684 | - | 0.527778 | |
yccR | Hypothetical protein yccR | chromosome | CDS | 1064926 | 630 | + | 0.477778 | |
ycdC | Hypothetical transcriptional regulator ycdC | chromosome | CDS | 1107710 | 666 | + | 0.512012 | |
ycdI | Hypothetical transcriptional regulator ydcI | chromosome | CDS | 1686634 | 1065 | - | 0.479812 | |
ycfQ | Hypothetical transcriptional regulator ycfQ | chromosome | CDS | 1312428 | 711 | - | 0.506329 | |
ycfX | Hypothetical protein ycfX | chromosome | CDS | 1322820 | 912 | + | 0.523026 | |
ycgE | Hypothetical transcriptional regulator ycgE | chromosome | CDS | 1453118 | 732 | - | 0.484973 | |
yciT | Hypothetical transcriptional regulator yciT | chromosome | CDS | 1587890 | 750 | - | 0.494667 | |
ycjW | Hypothetical transcriptional regulator ycjW | chromosome | CDS | 1625584 | 999 | - | 0.455455 | |
ydcN | Hypothetical protein ydcN | chromosome | CDS | 1696911 | 537 | + | 0.495345 | |
ydcR | Hypothetical protein ydcR | chromosome | CDS | 1700297 | 1407 | + | 0.509595 | |
ydeO | Hypothetical transcriptional regulator ydeO | chromosome | CDS | 1768598 | 762 | - | 0.392388 | |
ydfH | Hypothetical transcriptional regulator ydfH | chromosome | CDS | 1809527 | 687 | + | 0.508006 | |
ydhB | Hypothetical transcriptional regulator ydhB | chromosome | CDS | 1895004 | 933 | - | 0.535906 | |
ydhM | Hypothetical transcriptional regulator ydhM | chromosome | CDS | 1886552 | 600 | + | 0.525 | |
ydiP | Hypothetical transcriptional regulator ydiP | chromosome | CDS | 1934359 | 912 | - | 0.427632 | |
ydiZ | Hypothetical protein ydiZ | chromosome | CDS | 1962496 | 291 | + | 0.439863 | |
ydjF | Hypothetical transcriptional regulator ydjF | chromosome | CDS | 2011326 | 759 | - | 0.422925 | |
yeaM | Hypothetical transcriptional regulator yeaM | chromosome | CDS | 2031988 | 822 | - | 0.501217 | |
yebK | Hex regulon repressor | chromosome | CDS | 2088329 | 870 | + | 0.491954 | |
yedW | Probable transcriptional Regulatory protein yedW | chromosome | CDS | 2189790 | 783 | - | 0.429119 | |
yeeY | Hypothetical transcriptional regulator yeeY | chromosome | CDS | 2375386 | 951 | - | 0.508938 | |
yegW | Hypothetical transcriptional regulator yegW | chromosome | CDS | 2472707 | 747 | - | 0.52075 | |
yehT | Hypothetical protein yehT | chromosome | CDS | 2503950 | 735 | - | 0.502041 | |
yehV | MerR-like regulator A | chromosome | CDS | 2506573 | 732 | + | 0.530055 | |
yeiE | Hypothetical transcriptional regulator yeiE | chromosome | CDS | 2540430 | 882 | - | 0.536281 | |
yejH | Hypothetical protein yejH | chromosome | CDS | 2571169 | 1761 | + | 0.533788 | |
yfaX | Hypothetical transcriptional regulator yfaX | chromosome | CDS | 2647811 | 783 | - | 0.503193 | |
yfeD | Hypothetical protein yfeD | chromosome | CDS | 2799848 | 393 | + | 0.463104 | |
yfeG | Ethanolamine operon Regulatory protein | chromosome | CDS | 2831678 | 1053 | - | 0.528965 | |
yfeR | Hypothetical transcriptional regulator yfeR | chromosome | CDS | 2806809 | 927 | - | 0.542611 | |
yfhH | Hypothetical protein yfhH | chromosome | CDS | 2961554 | 921 | + | 0.509229 | |
yfhP | Hypothetical protein yfhP | chromosome | CDS | 2929824 | 489 | - | 0.537832 | |
yfiE | Hypothetical transcriptional regulator yfiE | chromosome | CDS | 2977130 | 927 | - | 0.485437 | |
ygaA | Hypothetical sigma-54-dependent transcriptional regulator ygaA | chromosome | CDS | 3113245 | 1590 | - | 0.554717 | |
ygaE | Hypothetical transcriptional regulator ygaE | chromosome | CDS | 3074327 | 681 | + | 0.53304 | |
ygaV | Hypothetical transcriptional regulator ygaV | chromosome | CDS | 3075882 | 300 | + | 0.52 | |
ygbI | Hypothetical transcriptional regulator ygbI | chromosome | CDS | 3141624 | 798 | - | 0.517544 | |
ygeV | Hypothetical sigma-54-dependent transcriptional regulator ygeV | chromosome | CDS | 3300449 | 1779 | - | 0.459247 | |
ygfI | Hypothetical transcriptional regulator ygfI | chromosome | CDS | 3357853 | 897 | - | 0.444816 | |
yggD | Hypothetical protein yggD | chromosome | CDS | 3369221 | 510 | - | 0.488235 | |
ygiP | Hypothetical transcriptional regulator ygiP | chromosome | CDS | 3645918 | 981 | - | 0.490316 | |
ygiX | Transcriptional Regulatory protein qseB | chromosome | CDS | 3598236 | 660 | + | 0.522727 | |
yhaJ | Hypothetical transcriptional regulator yhaJ | chromosome | CDS | 3692693 | 897 | - | 0.561873 | |
yhcK | Hypothetical transcriptional regulator yhcK | chromosome | CDS | 3798860 | 792 | - | 0.535354 | |
yhcO | Hypothetical protein yhcO | chromosome | CDS | 3809336 | 273 | - | 0.424908 | |
yhcS | Hypothetical transcriptional regulator yhcS | chromosome | CDS | 3812999 | 930 | + | 0.521505 | |
yhdM | Zn(II)-responsive regulator of zntA | chromosome | CDS | 3870081 | 426 | - | 0.495305 | |
yhgF | Protein yhgF | chromosome | CDS | 3964250 | 2322 | + | 0.565461 | |
yhhG | Nickel responsive regulator | chromosome | CDS | 4057243 | 402 | + | 0.542289 | |
yhiE | Hypothetical protein yhiE | chromosome | CDS | 4097033 | 606 | + | 0.343234 | |
yhiF | Hypothetical transcriptional regulator yhiF | chromosome | CDS | 4084409 | 531 | + | 0.397363 | |
yhiW | Hypothetical transcriptional regulator yhiW | chromosome | CDS | 4102635 | 729 | - | 0.410151 | |
yhiX | Transcriptional regulator gadX | chromosome | CDS | 4103732 | 825 | - | 0.410909 | |
yhjB | Hypothetical transcriptional regulator yhjB | chromosome | CDS | 4110037 | 603 | - | 0.474295 | |
yhjC | Hypothetical transcriptional regulator yhjC | chromosome | CDS | 4111087 | 972 | + | 0.51749 | |
yiaC | Hypothetical acetyltransferase yiaC | chromosome | CDS | 4152689 | 441 | + | 0.521542 | |
yiaJ | Hypothetical transcriptional regulator yiaJ | chromosome | CDS | 4179230 | 849 | - | 0.518257 | |
yidL | Hypothetical transcriptional regulator yidL | chromosome | CDS | 4365361 | 897 | + | 0.434783 | |
yidZ | Hypothetical transcriptional regulator yidZ | chromosome | CDS | 4394493 | 969 | + | 0.524252 | |
yieP | Hypothetical transcriptional regulator yieP | chromosome | CDS | 4441668 | 693 | - | 0.493506 | |
yifA | Conserved hypothetical protein | chromosome | CDS | 4448165 | 840 | - | 0.479762 | |
yihL | c4821 | Hypothetical transcriptional regulator yihL | chromosome | CDS | 4585831 | 711 | + | 0.485232 |
yihW | c4824 | Hypothetical transcriptional regulator yihW | chromosome | CDS | 4588956 | 789 | - | 0.498099 |
yiiD | c4835 | Hypothetical protein yiiD | chromosome | CDS | 4599551 | 990 | + | 0.543434 |
yiiE | c4840 | Hypothetical protein yiiE | chromosome | CDS | 4603350 | 246 | + | 0.46748 |
yijC | c4926 | Hypothetical protein yijC | chromosome | CDS | 4693471 | 705 | + | 0.526241 |
yijO | c4913 | Hypothetical transcriptional regulator yijO | chromosome | CDS | 4674479 | 852 | - | 0.53169 |
yjaB | c4969 | Hypothetical acetyltransferase yjaB | chromosome | CDS | 4744867 | 444 | - | 0.536036 |
yjaE | c4952 | Regulator of sigma D | chromosome | CDS | 4727539 | 477 | - | 0.48218 |
yjcT | c5090 | D-allose kinase | chromosome | CDS | 4866029 | 930 | - | 0.53871 |
yjdC | c5217 | Protein yjdC | chromosome | CDS | 4971767 | 600 | - | 0.535 |
yjdG | c5130 | Transcriptional Regulatory protein dcuR | chromosome | CDS | 4906210 | 720 | - | 0.493056 |
yjeB | c5262 | Hypothetical protein yjeB | chromosome | CDS | 5014350 | 426 | + | 0.483568 |
yjfJ | c5266 | Hypothetical protein yjfJ precursor | chromosome | CDS | 5018624 | 699 | + | 0.509299 |
yjfQ | c5279 | Hypothetical transcriptional regulator yjfQ | chromosome | CDS | 5025766 | 756 | - | 0.507937 |
yjiE | Hypothetical transcriptional regulator yjiE | chromosome | CDS | 5151301 | 990 | - | 0.508081 | |
yjjM | Hypothetical protein yjjM | chromosome | CDS | 5183931 | 906 | - | 0.472406 | |
yjjQ | Hypothetical protein yjjQ | chromosome | CDS | 5192466 | 726 | + | 0.451791 | |
ykgA | Hypothetical transcriptional regulator ykgA | chromosome | CDS | 400086 | 891 | - | 0.430976 | |
ykgD | Hypothetical transcriptional regulator ykgD | chromosome | CDS | 404671 | 906 | + | 0.498896 | |
yneJ | Hypothetical transcriptional regulator yneJ | chromosome | CDS | 1791712 | 882 | + | 0.535147 | |
ynfL | Hypothetical transcriptional regulator ynfL | chromosome | CDS | 1829406 | 894 | - | 0.521253 | |
ypdB | Hypothetical protein ypdB | chromosome | CDS | 2782748 | 756 | + | 0.474868 | |
ypdC | Hypothetical transcriptional regulator ypdC | chromosome | CDS | 2783516 | 858 | + | 0.519814 | |
yphH | Hypothetical protein yphH | chromosome | CDS | 2945838 | 1200 | + | 0.513333 | |
yqfE | Hypothetical protein yqfE | chromosome | CDS | 3355334 | 279 | - | 0.544803 | |
yqgE | Protein yqgE | chromosome | CDS | 3388820 | 636 | + | 0.509434 | |
yqhC | Hypothetical transcriptional regulator yqhC | chromosome | CDS | 3575906 | 1128 | - | 0.500886 | |
yqjI | Hypothetical protein yqjI | chromosome | CDS | 3657374 | 624 | + | 0.535256 | |
yrbA | Protein yrbA | chromosome | CDS | 3770042 | 270 | - | 0.503704 | |
ytfH | c5311 | Hypothetical protein ytfH | chromosome | CDS | 5051120 | 492 | + | 0.514228 |