Gene list
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COG category: Transcription
Organism: Shigella flexneri 2a str. 2457T, 2457T
Number of genes found: 267
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| Shigella flexneri 2a str. 2457T, 2457T | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | S1807 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1743715 | 600 | + | 0.52 |
| NA | S4473 | putative deoR family transcriptional regulator | SubName: Full=Putative deoR family transcriptional regulator; | chromosome | CDS | 4380959 | 696 | + | 0.45977 |
| NA | S3186 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3068384 | 384 | - | 0.552083 |
| NA | S2952 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 2829935 | 252 | - | 0.492063 |
| NA | S0725 | putative bacteriophage protein | SubName: Full=Putative bacteriophage protein; | chromosome | CDS | 717545 | 201 | + | 0.457711 |
| NA | S2708 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2603040 | 333 | + | 0.621622 |
| NA | S2881 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2765742 | 300 | + | 0.53 |
| NA | S2585 | putative 2-component transcriptional regulator | RecName: Full=Transcriptional regulatory protein YpdB; | chromosome | CDS | 2481362 | 735 | + | 0.47483 |
| NA | S0914 | putative bacteriophage protein | SubName: Full=Putative bacteriophage protein; | chromosome | CDS | 902354 | 423 | - | 0.513002 |
| NA | S2568 | sucrose specific repressor | RecName: Full=Sucrose operon repressor; AltName: Full=Csc operon regulatory protein; | chromosome | CDS | 2458942 | 1059 | - | 0.516525 |
| NA | S1025 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1012174 | 426 | + | 0.471831 |
| NA | S2956 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2832874 | 408 | + | 0.512255 |
| NA | S2750 | hypothetical protein | RecName: Full=HTH-type transcriptional regulator IscR; | chromosome | CDS | 2640265 | 489 | - | 0.537832 |
| NA | S0724 | putative bacteriophage protein | SubName: Full=Putative bacteriophage protein; | chromosome | CDS | 717193 | 258 | + | 0.5 |
| NA | S4812 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 378572 | 240 | - | 0.445833 |
| NA | S1486 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 1448558 | 1065 | - | 0.479812 |
| NA | S4819 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 1987178 | 738 | - | 0.371274 |
| NA | S1535 | putative enzyme | SubName: Full=Putative enzyme; | chromosome | CDS | 1493983 | 1911 | + | 0.549451 |
| NA | S1623 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1577486 | 291 | - | 0.436426 |
| NA | S1654 | putative ARAC-type regulatory protein | RecName: Full=HTH-type transcriptional regulator YdeO; | chromosome | CDS | 1607878 | 762 | - | 0.395013 |
| NA | S4837 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4172182 | 765 | + | 0.355556 |
| NA | S1514 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 1476348 | 792 | + | 0.494949 |
| NA | S4688 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4580564 | 264 | - | 0.416667 |
| NA | S3190 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3073538 | 207 | + | 0.536232 |
| NA | S2953 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 2830351 | 564 | + | 0.429078 |
| NA | S1568 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 1526272 | 759 | + | 0.424242 |
| NA | S1288 | putative sensor-type regulator | SubName: Full=Putative sensor-type regulator; | chromosome | CDS | 1247578 | 1929 | + | 0.513738 |
| NA | S1652 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 1606086 | 501 | + | 0.461078 |
| NA | S3212 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3093545 | 606 | - | 0.415842 |
| NA | S0810 | putative toxin | SubName: Full=Putative toxin; | chromosome | CDS | 793401 | 468 | + | 0.538462 |
| NA | S1371 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 1337747 | 750 | - | 0.496 |
| NA | S2586 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 2482109 | 573 | + | 0.544503 |
| NA | S2722 | hypothetical bacteriophage protein | SubName: Full=Hypothetical bacteriophage protein; | chromosome | CDS | 2612123 | 222 | - | 0.5 |
| NA | S1897 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1841282 | 723 | - | 0.437068 |
| NA | S2042 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1960342 | 381 | + | 0.475066 |
| NA | S1430 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1401670 | 387 | - | 0.436693 |
| NA | S4001 | putative FADA-type transcriptional regulator | SubName: Full=Putative FADA-type transcriptional regulator; | chromosome | CDS | 3896308 | 297 | - | 0.552189 |
| NA | S4836 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4171175 | 762 | - | 0.372703 |
| acrR | S0416 | acrAB operon repressor | RecName: Full=HTH-type transcriptional regulator AcrR; AltName: Full=Potential acrAB operon repressor; | chromosome | CDS | 422093 | 648 | + | 0.453704 |
| adiY | S3623 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3500782 | 762 | - | 0.413386 |
| agaR | S3381 | putative DEOR-type transcriptional regulator of aga operon | SubName: Full=Putative DEOR-type transcriptional regulator of aga operon; | chromosome | CDS | 3259517 | 825 | - | 0.522424 |
| araC | S0061 | transcriptional regulator for ara operon | SubName: Full=Transcriptional regulator for ara operon; | chromosome | CDS | 67715 | 879 | + | 0.526735 |
| arcA | S4704 | negative response regulator of genes in aerobic pathways (sensors, ArcB and CpxA) | RecName: Full=Aerobic respiration control protein ArcA; | chromosome | CDS | 4597292 | 717 | - | 0.51046 |
| argR | S3492 | repressor of arg regulon | RecName: Full=Arginine repressor; | chromosome | CDS | 3362637 | 471 | + | 0.488323 |
| arsR | S4232 | transcriptional repressor of chromosomal ars operon | SubName: Full=Transcriptional repressor of chromosomal ars operon; | chromosome | CDS | 4146620 | 345 | + | 0.498551 |
| ascG | S2928 | ascBF operon repressor | SubName: Full=AscBF operon repressor; | chromosome | CDS | 2806562 | 1011 | - | 0.526212 |
| asnC | S3945 | regulator for asnA, asnC and gidA | RecName: Full=Regulatory protein AsnC; | chromosome | CDS | 3839023 | 459 | + | 0.492375 |
| baeR | S2269 | transcriptional response regulatory protein (sensor BaeS) | SubName: Full=Transcriptional response regulatory protein (Sensor BaeS); | chromosome | CDS | 2153920 | 723 | + | 0.538036 |
| basR | S3620 | transcriptional regulatory protein, | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 3496896 | 669 | - | 0.532138 |
| bglG | S4040 | positive regulation of bgl operon | SubName: Full=Positive regulation of bgl operon; | chromosome | CDS | 3933116 | 822 | - | 0.425791 |
| bglJ | S4669 | 2-component transcriptional regulator | SubName: Full=2-component transcriptional regulator; | chromosome | CDS | 4563323 | 528 | + | 0.464015 |
| cbl | S2165 | transcriptional regulator cys regulon | SubName: Full=Transcriptional regulator cys regulon; | chromosome | CDS | 2052641 | 951 | - | 0.474238 |
| cobB | S1204 | putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1170154 | 822 | + | 0.508516 |
| cpxR | S3757 | transcriptional regulator in 2-component system | RecName: Full=Transcriptional regulatory protein CpxR; | chromosome | CDS | 3652565 | 699 | + | 0.51216 |
| creB | S4701 | catabolic regulation response regulator | SubName: Full=Catabolic regulation response regulator; | chromosome | CDS | 4593710 | 690 | + | 0.549275 |
| csgD | S1107 | probable csgAB operon transcriptional regulatory protein | SubName: Full=Probable csgAB operon transcriptional regulatory protein; | chromosome | CDS | 1081598 | 651 | - | 0.414747 |
| csiE | S2754 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2643875 | 1281 | + | 0.514442 |
| cspA | S4179 | cold shock protein 7.4, transcriptional activator of hns | RecName: Full=Cold shock protein CspA; Short=CSP-A; AltName: Full=7.4 kDa cold shock protein; AltName: Full=CS7.4; | chromosome | CDS | 4083892 | 213 | - | 0.483568 |
| cspC | S1518 | cold shock protein | RecName: Full=Cold shock-like protein CspC; Short=CSP-C; | chromosome | CDS | 1479011 | 210 | + | 0.466667 |
| cspD | S0880 | cold shock protein | RecName: Full=Cold shock-like protein CspD; Short=CSP-D; | chromosome | CDS | 868492 | 225 | - | 0.484444 |
| cspE | S0680 | cold shock protein | RecName: Full=Cold shock-like protein CspE; Short=CSP-E; | chromosome | CDS | 689253 | 210 | - | 0.438095 |
| cspG | S1060 | putative cold shock protein | RecName: Full=Cold shock-like protein CspG; Short=CPS-G; | chromosome | CDS | 1043340 | 201 | + | 0.457711 |
| cspH | S1057 | cold shock-like protein | RecName: Full=Cold shock-like protein CspH; Short=CSP-H; | chromosome | CDS | 1042054 | 213 | - | 0.478873 |
| cysB | S1362 | positive transcriptional regulator for cysteine regulon | SubName: Full=Positive transcriptional regulator for cysteine regulon; | chromosome | CDS | 1328006 | 975 | + | 0.489231 |
| cytR | S3735 | regulator for deo operon, udp, cdd, tsx, nupC, and nupG | RecName: Full=HTH-type transcriptional repressor CytR; | chromosome | CDS | 3633684 | 1026 | + | 0.515595 |
| dbpA | S1447 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 1410534 | 1368 | + | 0.516082 |
| deaD | S3420 | inducible ATP-independent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3289294 | 1941 | - | 0.555384 |
| deoR | S0836 | Deoxyribose operon repressor | SubName: Full=Deoxyribose operon repressor; | chromosome | CDS | 823555 | 759 | - | 0.503294 |
| dinG | S0790 | probable ATP-dependent helicase | RecName: Full=Probable ATP-dependent helicase DinG; EC=3.6.4.12; AltName: Full=DNA-damage-inducible protein G; | chromosome | CDS | 771852 | 2151 | + | 0.538819 |
| ebgR | S3322 | regulator of ebg operon | SubName: Full=Regulator of ebg operon; | chromosome | CDS | 3200573 | 984 | + | 0.513211 |
| emrR | S2898 | regulator of plasmid mcrB operon (microcin B17 synthesis) | SubName: Full=Regulator of plasmid mcrB operon (Microcin B17 synthesis); | chromosome | CDS | 2779303 | 531 | + | 0.489642 |
| envY | S0475 | envelope protein | SubName: Full=Envelope protein; | chromosome | CDS | 479858 | 762 | - | 0.454068 |
| evgA | S2573 | putative positive transcription regulator (sensor EvgS) | RecName: Full=Positive transcription regulator EvgA; | chromosome | CDS | 2464957 | 615 | + | 0.406504 |
| exuR | S3345 | negative regulator of exu regulon, exuT, uxaAC, and uxuB | RecName: Full=Exu regulon transcriptional regulator; | chromosome | CDS | 3229747 | 777 | + | 0.498069 |
| fadR | S1264 | negative regulator for fad regulon, and positive activator of fabA | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 1221530 | 720 | + | 0.515278 |
| farR | S0580 | transcriptional regulator of succinyl CoA synthetase operon | SubName: Full=Transcriptional regulator of succinyl CoA synthetase operon; | chromosome | CDS | 587457 | 945 | + | 0.48254 |
| fhlA | S2940 | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons | SubName: Full=Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; | chromosome | CDS | 2817298 | 2079 | + | 0.525253 |
| fis | S3516 | site-specific DNA inversion stimulation factor; DNA-binding protein | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 3388925 | 297 | + | 0.47138 |
| flgM | S1155 | flagellar protein FlgM | RecName: Full=Negative regulator of flagellin synthesis; AltName: Full=Anti-sigma-28 factor; | chromosome | CDS | 1120488 | 294 | - | 0.530612 |
| fruR | S0077 | transcriptional repressor of fru operon and others | RecName: Full=Catabolite repressor/activator; AltName: Full=Fructose repressor; | chromosome | CDS | 85356 | 1005 | + | 0.549254 |
| frvR | S3774 | putative frv operon regulatory protein | SubName: Full=Putative frv operon regulatory protein; | chromosome | CDS | 3669507 | 651 | + | 0.528418 |
| fucR | S3014 | positive regulator of the fuc operon | RecName: Full=L-fucose operon activator; | chromosome | CDS | 2894494 | 732 | + | 0.48224 |
| galR | S3045 | repressor of galETK operon | SubName: Full=Repressor of galETK operon; | chromosome | CDS | 2931641 | 1032 | + | 0.521318 |
| galS | S2365 | mgl repressor, galactose operon inducer | SubName: Full=Mgl repressor, galactose operon inducer; | chromosome | CDS | 2242644 | 1041 | - | 0.524496 |
| gatR | S2275 | galactitol utilization operon repressor | SubName: Full=Galactitol utilization operon repressor; | chromosome | CDS | 2158719 | 780 | - | 0.465385 |
| gcvA | S3017 | positive regulator of gcv operon | SubName: Full=Positive regulator of gcv operon; | chromosome | CDS | 2896776 | 918 | - | 0.491285 |
| glcC | S3220 | transcriptional activator for glc operon | SubName: Full=Transcriptional activator for glc operon; | chromosome | CDS | 3104940 | 771 | + | 0.549935 |
| glpR | S4319 | repressor of the glp operon | RecName: Full=Glycerol-3-phosphate regulon repressor; | chromosome | CDS | 4240848 | 759 | + | 0.549407 |
| gntR | S4302 | regulator of gluconate (gnt) operon | SubName: Full=Regulator of gluconate (Gnt) operon; | chromosome | CDS | 4221348 | 939 | + | 0.549521 |
| greA | S3439 | transcription elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3311539 | 477 | - | 0.486373 |
| greB | S4338 | transcription elongation factor and transcript cleavage factor | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 4266102 | 513 | - | 0.493177 |
| gutM | S2920 | glucitol operon activator | SubName: Full=Glucitol operon activator; | chromosome | CDS | 2796929 | 360 | + | 0.544444 |
| hcaR | S2756 | transcriptional activator of hca cluster | SubName: Full=Transcriptional activator of hca cluster; | chromosome | CDS | 2646446 | 891 | - | 0.499439 |
| hepA | S0056 | probable ATP-dependent RNA helicase | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 57771 | 2907 | - | 0.548676 |
| hpaA | S4647 | putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | SubName: Full=Putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein; | chromosome | CDS | 4541304 | 891 | - | 0.460157 |
| hpcR | S4655 | regulator of the 4HPA-hydroxylase operon | RecName: Full=Homoprotocatechuate degradative operon repressor; | chromosome | CDS | 4549533 | 447 | + | 0.505593 |
| hypB | S2936 | guanine-nucleotide binding protein | SubName: Full=Guanine-nucleotide binding protein; | chromosome | CDS | 2813961 | 873 | + | 0.553265 |
| iciA | S3101 | replication initiation inhibitor | RecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; | chromosome | CDS | 2986103 | 894 | + | 0.540268 |
| iclR | S3646 | repressor of aceBA operon | SubName: Full=Repressor of aceBA operon; | chromosome | CDS | 3531000 | 864 | + | 0.537037 |
| ilvY | S3911 | ilvC positive regulator | SubName: Full=IlvC positive regulator; | chromosome | CDS | 3806089 | 891 | + | 0.575758 |
| leuO | S0073 | probable transcriptional activator for leuABCD operon | SubName: Full=Probable transcriptional activator for leuABCD operon; | chromosome | CDS | 81518 | 1122 | + | 0.437611 |
| lexA | S3569 | regulator for SOS(lexA) regulon | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 3438963 | 609 | + | 0.52381 |
| lldR | S4125 | transcriptional regulator | RecName: Full=Putative L-lactate dehydrogenase operon regulatory protein; | chromosome | CDS | 4022789 | 777 | - | 0.541828 |
| lrhA | S2500 | LysR family NADH dehydrogenase transcriptional regulator | SubName: Full=LysR family NADH dehydrogenase transcriptional regulator; | chromosome | CDS | 2393273 | 939 | - | 0.498403 |
| lrp | S0889 | regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | RecName: Full=Leucine-responsive regulatory protein; | chromosome | CDS | 878779 | 495 | + | 0.474747 |
| lysR | S3047 | positive regulator for lysine | SubName: Full=Positive regulator for lysine; | chromosome | CDS | 2934063 | 936 | + | 0.530983 |
| malI | S1777 | repressor of malXY | SubName: Full=Repressor of malXY; | chromosome | CDS | 1714506 | 1029 | - | 0.544218 |
| marA | S1690 | transcriptional activator of defense systems | RecName: Full=Multiple antibiotic resistance protein MarA; | chromosome | CDS | 1635424 | 384 | - | 0.458333 |
| marR | S1691 | multiple antibiotic resistance protein, repressor of mar operon | SubName: Full=Multiple antibiotic resistance protein, repressor of mar operon; | chromosome | CDS | 1635827 | 378 | - | 0.5 |
| melR | S3625 | regulator of melibiose operon | SubName: Full=Regulator of melibiose operon; | chromosome | CDS | 3504334 | 909 | - | 0.49835 |
| metJ | S3731 | repressor of all met genes but metF | RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; | chromosome | CDS | 3629745 | 318 | + | 0.518868 |
| metR | S3849 | regulator for metE and metH | RecName: Full=HTH-type transcriptional regulator MetR; | chromosome | CDS | 3747353 | 954 | + | 0.563941 |
| mfd | S1198 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1161152 | 3447 | - | 0.548593 |
| mlc | S1747 | putative NAGC-like transcriptional regulator | SubName: Full=Putative NAGC-like transcriptional regulator; | chromosome | CDS | 1681602 | 1221 | - | 0.522523 |
| mtlR | S4133 | repressor for mtl | SubName: Full=Repressor for mtl; | chromosome | CDS | 4033164 | 588 | - | 0.511905 |
| nac | S2166 | nitrogen assimilation control protein | SubName: Full=Nitrogen assimilation control protein; | chromosome | CDS | 2053693 | 918 | - | 0.48366 |
| nagC | S0628 | transcriptional repressor of nag (N-acetylglucosamine) operon | RecName: Full=N-acetylglucosamine repressor; | chromosome | CDS | 646359 | 1221 | + | 0.529075 |
| narL | S1308 | nitrate/nitrite response regulator protein NarL | RecName: Full=Nitrate/nitrite response regulator protein NarL; | chromosome | CDS | 1270706 | 651 | - | 0.516129 |
| narP | S2407 | nitrate/nitrite response regulator (sensor NarQ) | SubName: Full=Nitrate/nitrite response regulator (Sensor NarQ); | chromosome | CDS | 2291958 | 648 | + | 0.523148 |
| nhaR | S0019 | transcriptional activator of nhaA | RecName: Full=Transcriptional activator protein NhaR; AltName: Full=Na(+)/H(+) antiporter regulatory protein; | chromosome | CDS | 17371 | 900 | + | 0.474444 |
| nlp | S3446 | regulatory factor of maltose metabolism | RecName: Full=Sugar fermentation stimulation protein B; AltName: Full=Ner-like protein; | chromosome | CDS | 3318207 | 279 | + | 0.494624 |
| nrfB | S3598 | formate-dependent nitrite reductase | SubName: Full=Formate-dependent nitrite reductase; | chromosome | CDS | 3472020 | 567 | + | 0.536155 |
| nusA | S3427 | transcription pausing; L factor | RecName: Full=Transcription termination/antitermination protein NusA; | chromosome | CDS | 3299338 | 1488 | - | 0.526882 |
| nusB | S0361 | transcription termination factor NusB | RecName: Full=N utilization substance protein B; Short=Protein NusB; | chromosome | CDS | 363769 | 420 | + | 0.540476 |
| nusG | S3680 | component in transcription antitermination | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 3575178 | 546 | - | 0.514652 |
| ompR | S4339 | response regulator (sensor, EnvZ) | RecName: Full=Transcriptional regulatory protein OmpR; | chromosome | CDS | 4266806 | 720 | + | 0.547222 |
| oxyR | S3701 | activator of hydrogen peroxide-inducible genes OxyR | SubName: Full=Activator of hydrogen peroxide-inducible genes OxyR; | chromosome | CDS | 3593790 | 918 | - | 0.54902 |
| pdhR | S0112 | transcriptional regulator for pyruvate dehydrogenase complex | SubName: Full=Transcriptional regulator for pyruvate dehydrogenase complex; | chromosome | CDS | 119843 | 765 | + | 0.55817 |
| phoB | S0344 | positive response regulator for pho regulon | RecName: Full=Phosphate regulon transcriptional regulatory protein PhoB; | chromosome | CDS | 345784 | 690 | + | 0.53913 |
| phoP | S1232 | transcriptional regulatory protein | RecName: Full=Virulence transcriptional regulatory protein PhoP; | chromosome | CDS | 1193853 | 672 | - | 0.480655 |
| pspA | S1391 | phage shock protein, inner membrane protein | RecName: Full=Phage shock protein A; | chromosome | CDS | 1362091 | 669 | + | 0.491779 |
| pspC | S1393 | putative regulator of phage shock response | RecName: Full=Phage shock protein C; | chromosome | CDS | 1363037 | 360 | + | 0.502778 |
| pspF | S1390 | psp operon transcriptional activator | SubName: Full=Psp operon transcriptional activator; | chromosome | CDS | 1360947 | 993 | - | 0.521652 |
| purR | S1818 | transcriptional repressor for pur regulon, glyA, glnB, prsA, speA | RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; | chromosome | CDS | 1757123 | 1026 | + | 0.537037 |
| rbsR | S3931 | regulator for rbs operon | RecName: Full=Ribose operon repressor; | chromosome | CDS | 3824594 | 984 | - | 0.504065 |
| rcsA | S2090 | positive regulator for ctr capsule biosynthesis, positive transcription factor | SubName: Full=Positive regulator for ctr capsule biosynthesis, positive transcription factor; | chromosome | CDS | 2000515 | 624 | + | 0.383013 |
| rcsB | S2432 | positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) | RecName: Full=Transcriptional regulatory protein RcsB; | chromosome | CDS | 2317037 | 651 | + | 0.477727 |
| recG | S4077 | DNA helicase | SubName: Full=DNA helicase; | chromosome | CDS | 3977650 | 2082 | - | 0.570125 |
| relA | S2991 | (p)ppGpp synthetase I (GTP pyrophosphokinase) | RecName: Full=GTP pyrophosphokinase; EC=2.7.6.5; AltName: Full=(p)ppGpp synthase; AltName: Full=ATP:GTP 3-pyrophosphotransferase; AltName: Full=ppGpp synthase I; | chromosome | CDS | 2865107 | 2235 | - | 0.53736 |
| rfaH | S3834 | transcriptional activator | RecName: Full=Transcription antitermination protein RfaH; | chromosome | CDS | 3735351 | 489 | + | 0.498978 |
| rhaR | S3765 | positive regulator for rhaRS operon | RecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; | chromosome | CDS | 3660077 | 939 | - | 0.498403 |
| rhaS | S3766 | positive regulator for rhaBAD operon | RecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; | chromosome | CDS | 3660999 | 837 | - | 0.517324 |
| rhlB | S3906 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 3799099 | 1266 | + | 0.524487 |
| rhlE | S0788 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 769856 | 1221 | + | 0.553645 |
| rho | S3903 | transcription termination factor Rho, polarity suppressor | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 3797053 | 1260 | - | 0.502381 |
| rnb | S1373 | RNase II, mRNA degradation | RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; | chromosome | CDS | 1341116 | 1935 | - | 0.531783 |
| rnc | S2802 | RNase III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 2694042 | 681 | - | 0.508076 |
| rnk | S0534 | regulator of nucleoside diphosphate kinase | RecName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 545296 | 411 | - | 0.547445 |
| rob | S4699 | right origin-binding protein | RecName: Full=Right origin-binding protein; | chromosome | CDS | 4592144 | 870 | - | 0.531034 |
| rpoA | S4435 | RNA polymerase, alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 4347292 | 990 | + | 0.520202 |
| rpoB | S3675 | RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3568193 | 4029 | - | 0.525689 |
| rpoC | S3674 | RNA polymerase, beta prime subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3563893 | 4224 | - | 0.539062 |
| rpoD | S3313 | sigmaD(70) factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 3190748 | 1827 | + | 0.530378 |
| rpoE | S2808 | sigma-E factor of RNA polymerase | RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA polymerase sigma-E factor; AltName: Full=Sigma-24; | chromosome | CDS | 2700096 | 576 | - | 0.489583 |
| rpoH | S4284 | sigma(32) factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 4202701 | 855 | + | 0.540351 |
| rpoN | S3460 | sigma(54 or 60) factor of RNA polymerase | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 3328003 | 1434 | + | 0.529986 |
| rpoZ | S4080 | RNA polymerase, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 3982560 | 276 | - | 0.532609 |
| rstA | S1761 | response transcriptional regulatory protein (RstB sensor) | SubName: Full=Response transcriptional regulatory protein (RstB sensor); | chromosome | CDS | 1696434 | 744 | + | 0.485215 |
| rtcR | S4320 | putative 2-component regulator | SubName: Full=Putative 2-component regulator; | chromosome | CDS | 4241588 | 1599 | - | 0.553471 |
| sdiA | S2055 | transcriptional regulator of ftsQAZ gene cluster | SubName: Full=Transcriptional regulator of ftsQAZ gene cluster; | chromosome | CDS | 1969007 | 627 | - | 0.470494 |
| slyA | S1801 | transcriptional regulator | RecName: Full=Transcriptional regulator SlyA; | chromosome | CDS | 1738082 | 441 | - | 0.47619 |
| sorC | S3636 | probable sor-operon regulator | SubName: Full=Probable sor-operon regulator; | chromosome | CDS | 3518466 | 948 | + | 0.494726 |
| soxR | S3590 | redox-sensing activator of soxS | RecName: Full=Redox-sensitive transcriptional activator SoxR; | chromosome | CDS | 3460085 | 465 | + | 0.52043 |
| soxS | S3589 | regulation of superoxide response regulon | SubName: Full=Regulation of superoxide response regulon; | chromosome | CDS | 3459676 | 324 | - | 0.518519 |
| spoT | S4079 | (p)ppGpp synthetase II and guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase | RecName: Full=Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; AltName: Full=Penta-phosphate guanosine-3-pyrophosphohydrolase; Short=(ppGpp)ase; | chromosome | CDS | 3980433 | 2109 | - | 0.537696 |
| srlR | S2921 | regulator for gut (srl), glucitol operon | SubName: Full=Regulator for gut (Srl), glucitol operon; | chromosome | CDS | 2797355 | 774 | + | 0.48708 |
| srmB | S2811 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2703555 | 1335 | + | 0.549064 |
| tdcA | S3370 | transcriptional activator of tdc operon | RecName: Full=HTH-type transcriptional regulator TdcA; AltName: Full=Tdc operon transcriptional activator; | chromosome | CDS | 3248751 | 939 | - | 0.421725 |
| torR | S1065 | TorCAD response regulator | SubName: Full=DNA-binding transcriptional regulator TorR; SubName: Full=TorCAD response regulator; | chromosome | CDS | 1049126 | 693 | - | 0.526696 |
| treR | S4511 | repressor of treA,B,C | SubName: Full=Repressor of treA,B,C; | chromosome | CDS | 4412066 | 948 | + | 0.537975 |
| trpR | S4696 | regulator for trp operon and aroH; trp aporepressor | RecName: Full=Trp operon repressor; | chromosome | CDS | 4590517 | 327 | + | 0.53211 |
| ttk | S4088 | putative transcriptional regulator | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 3989853 | 639 | - | 0.528951 |
| tyrR | S1412 | regulatory protein TyrR | SubName: Full=Regulatory protein TyrR; | chromosome | CDS | 1381480 | 1542 | + | 0.520104 |
| uhpA | S3976 | response regulator | RecName: Full=Transcriptional regulatory protein UhpA; | chromosome | CDS | 3872000 | 591 | - | 0.590525 |
| uidR | S1772 | repressor for uid operon | RecName: Full=HTH-type transcriptional regulator UidR; AltName: Full=Uid operon repressor; | chromosome | CDS | 1712031 | 591 | - | 0.502538 |
| umuD | S1260 | mutagenesis and repair protein | RecName: Full=Protein UmuD; EC=3.4.21.-; Contains: RecName: Full=Protein UmuD; | chromosome | CDS | 1217359 | 420 | + | 0.478571 |
| uvrY | S2053 | putative 2-component transcriptional regulator | RecName: Full=Response regulator UvrY; | chromosome | CDS | 1967641 | 657 | - | 0.490107 |
| uxuR | S4452 | regulator for uxu operon | SubName: Full=Regulator for uxu operon; | chromosome | CDS | 4360182 | 774 | - | 0.533592 |
| vacB | S4602 | putative enzyme | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; AltName: Full=Protein VacB; | chromosome | CDS | 4503590 | 2484 | + | 0.549919 |
| waaP | S4101 | lipopolysaccharide core biosynthesis protein | SubName: Full=Lipopolysaccharide core biosynthesis protein; | chromosome | CDS | 3999755 | 807 | + | 0.478315 |
| waaY | S4103 | putative LPS biosynthesis protein | SubName: Full=Putative LPS biosynthesis protein; | chromosome | CDS | 4001637 | 708 | + | 0.305085 |
| yaeO | S0182 | hypothetical protein | RecName: Full=Protein rof; | chromosome | CDS | 204109 | 261 | - | 0.463602 |
| yafC | S0202 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 221789 | 915 | - | 0.492896 |
| yafP | S0303 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 302666 | 453 | + | 0.428256 |
| yajF | S0338 | possible NAGC-like transcriptional regulator | SubName: Full=Possible NAGC-like transcriptional regulator; | chromosome | CDS | 338768 | 1020 | + | 0.541176 |
| ybaD | S0358 | hypothetical protein | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 361634 | 450 | + | 0.506667 |
| ybaO | S0398 | putative LRP-like transcriptional regulator | SubName: Full=Putative LRP-like transcriptional regulator; | chromosome | CDS | 403190 | 546 | + | 0.498168 |
| ybbI | S0439 | putative transcriptional regulator | RecName: Full=HTH-type transcriptional regulator CueR; AltName: Full=Copper efflux regulator; AltName: Full=Copper export regulator; | chromosome | CDS | 450114 | 408 | + | 0.585784 |
| ybbS | S0450 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 460827 | 927 | - | 0.516721 |
| ybbU | S0452 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 462543 | 816 | + | 0.528186 |
| ybeF | S0674 | lysR-family transcriptional regulator | SubName: Full=LysR-family transcriptional regulator; | chromosome | CDS | 685528 | 801 | + | 0.469413 |
| ybiH | S0787 | putative transcriptional regulator | RecName: Full=Uncharacterized HTH-type transcriptional regulator YbiH; | chromosome | CDS | 768956 | 684 | - | 0.542398 |
| ycdC | S1086 | putative tet operon regulator | RecName: Full=HTH-type transcriptional regulator RutR; AltName: Full=Rut operon repressor; | chromosome | CDS | 1066534 | 639 | + | 0.511737 |
| ycfQ | S1195 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1158835 | 711 | - | 0.49789 |
| ycfX | S1203 | putative NAGC-like transcriptional regulator | RecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; | chromosome | CDS | 1169227 | 912 | + | 0.524123 |
| ycjC | S1386 | hypothetical protein | RecName: Full=HTH-type transcriptional regulator PuuR; | chromosome | CDS | 1356048 | 558 | + | 0.510753 |
| ycjW | S1409 | putative LACI-type transcriptional regulator | SubName: Full=Putative LACI-type transcriptional regulator; | chromosome | CDS | 1377723 | 999 | - | 0.454454 |
| ycjZ | S1421 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 1389744 | 483 | + | 0.488613 |
| ydeW | S1708 | putative sorC family transcriptional regulator | SubName: Full=Putative sorC family transcriptional regulator; | chromosome | CDS | 1652321 | 954 | - | 0.51153 |
| ydfH | S1680 | hypothetical protein | RecName: Full=Uncharacterized HTH-type transcriptional regulator YdfH; | chromosome | CDS | 1626404 | 687 | - | 0.502183 |
| ydhB | S1819 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 1758145 | 933 | - | 0.534834 |
| yebK | S1929 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1869719 | 822 | + | 0.50365 |
| yedW | S2113 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 2016943 | 672 | - | 0.446429 |
| yeeY | S2197 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 2075759 | 984 | - | 0.498984 |
| yegW | S2288 | putative transcriptional regulator | RecName: Full=Uncharacterized HTH-type transcriptional regulator YegW; | chromosome | CDS | 2169083 | 747 | - | 0.511379 |
| yehT | S2324 | hypothetical protein | RecName: Full=Uncharacterized response regulatory protein yehT; | chromosome | CDS | 2203991 | 720 | - | 0.490278 |
| yeiE | S2371 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 2250670 | 882 | - | 0.535147 |
| yejH | S2400 | putative ATP-dependent helicase | SubName: Full=Putative ATP-dependent helicase; | chromosome | CDS | 2283289 | 1761 | + | 0.531516 |
| yfaH | S2453 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2345898 | 207 | + | 0.415459 |
| yfeG | S2638 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 2528200 | 561 | - | 0.559715 |
| yfeR | S2610 | putative LYSR-type transcriptional regulator | RecName: Full=Uncharacterized HTH-type transcriptional regulator YfeR; | chromosome | CDS | 2501364 | 927 | - | 0.537217 |
| yfeT | S2628 | hypothetical protein | RecName: Full=HTH-type transcriptional regulator MurR; AltName: Full=MurPQ operon repressor; | chromosome | CDS | 2520247 | 801 | - | 0.524345 |
| yfhH | S2780 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2677146 | 921 | + | 0.510315 |
| yfiE | S2812 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 2704924 | 927 | - | 0.481122 |
| ygaA | S2923 | putative 2-component transcriptional regulator | RecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; | chromosome | CDS | 2799083 | 1590 | - | 0.556604 |
| ygaE | S2876 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2762869 | 663 | + | 0.532428 |
| ygbI | S2946 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 2824200 | 798 | - | 0.511278 |
| ygfI | S3106 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 2992572 | 951 | - | 0.445846 |
| yggD | S3120 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3004003 | 510 | - | 0.482353 |
| ygiP | S3306 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 3183024 | 1002 | - | 0.491018 |
| ygiX | S3270 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 3151702 | 660 | + | 0.513636 |
| ygjM | S3329 | hypothetical protein | RecName: Full=Antitoxin HigA; | chromosome | CDS | 3212629 | 417 | - | 0.484412 |
| yhaJ | S3356 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 3235863 | 897 | - | 0.557414 |
| yhcI | S3475 | putative NAGC-like transcriptional regulator | RecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; | chromosome | CDS | 3346653 | 909 | - | 0.576458 |
| yhcK | S3479 | putative FADA-type transcriptional regulator | RecName: Full=Transcriptional regulator NanR; | chromosome | CDS | 3350877 | 783 | - | 0.521073 |
| yhcO | S3494 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3363791 | 273 | - | 0.428571 |
| yhcS | S3498 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 3367472 | 912 | + | 0.530702 |
| yhfR | S4369 | putative transcriptional regulator | RecName: Full=HTH-type transcriptional regulator FrlR; | chromosome | CDS | 4298702 | 798 | - | 0.502506 |
| yhgF | S4337 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4263684 | 2223 | - | 0.567701 |
| yhhG | S4264 | hypothetical protein | RecName: Full=Nickel-responsive regulator; | chromosome | CDS | 4184490 | 402 | - | 0.557214 |
| yhhY | S4299 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4218391 | 489 | - | 0.519427 |
| yhiE | S4221 | hypothetical protein | RecName: Full=Transcriptional regulator GadE; | chromosome | CDS | 4137898 | 528 | - | 0.329545 |
| yhiW | S4171 | putative ARAC-type regulatory protein | RecName: Full=HTH-type transcriptional regulator GadW; | chromosome | CDS | 4076000 | 729 | - | 0.421125 |
| yhiX | S4172 | putative ARAC-type regulatory protein | RecName: Full=HTH-type transcriptional regulator GadX; | chromosome | CDS | 4077096 | 825 | - | 0.412121 |
| yhjB | S4215 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 4131438 | 603 | + | 0.47927 |
| yhjC | S4214 | putative transcriptional regulator LYSR-type | SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 4130019 | 972 | - | 0.521605 |
| yiaC | S4185 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4090062 | 441 | - | 0.521542 |
| yiaJ | S4151 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 4051111 | 849 | + | 0.52179 |
| yidL | S3987 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3882098 | 894 | + | 0.434004 |
| yidP | S3991 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3885713 | 675 | + | 0.515556 |
| yidW | S4002 | regulator protein for dgo operon | SubName: Full=Regulator protein for dgo operon; | chromosome | CDS | 3896308 | 690 | - | 0.553623 |
| yieP | S3929 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3822630 | 549 | + | 0.495446 |
| yifA | S3921 | hypothetical protein | RecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; | chromosome | CDS | 3815843 | 840 | + | 0.486905 |
| yihL | S3804 | putative transcriptional regulator | RecName: Full=Uncharacterized HTH-type transcriptional regulator YihL; | chromosome | CDS | 3699487 | 711 | - | 0.489451 |
| yihW | S3790 | putative DEOR-type transcriptional regulator | SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 3685120 | 786 | - | 0.522901 |
| yiiD | S3786 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3682136 | 990 | - | 0.549495 |
| yiiE | S3783 | hypothetical protein | RecName: Full=Uncharacterized protein YiiE; | chromosome | CDS | 3678300 | 246 | - | 0.45935 |
| yijC | S3699 | hypothetical protein | RecName: Full=HTH-type transcriptional repressor FabR; | chromosome | CDS | 3591436 | 705 | - | 0.524823 |
| yijO | S3715 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3609834 | 852 | + | 0.529343 |
| yjaB | S3652 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3540544 | 444 | + | 0.536036 |
| yjaE | S3668 | putative transcriptional regulator | RecName: Full=Regulator of sigma D; | chromosome | CDS | 3557577 | 477 | + | 0.494759 |
| yjdC | S4556 | hypothetical protein | RecName: Full=HTH-type transcriptional regulator YjdC; | chromosome | CDS | 4458546 | 576 | - | 0.53125 |
| yjdG | S3631 | putative 2-component transcriptional regulator | RecName: Full=Transcriptional regulatory protein DcuR; | chromosome | CDS | 3512930 | 720 | - | 0.501389 |
| yjeB | S4601 | hypothetical protein | RecName: Full=HTH-type transcriptional repressor NsrR; | chromosome | CDS | 4503168 | 426 | + | 0.488263 |
| yjfQ | S4616 | putative DEOR-type transcriptional regulator | RecName: Full=HTH-type transcriptional regulator UlaR; | chromosome | CDS | 4514136 | 756 | - | 0.507937 |
| yjgJ | S4501 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4404594 | 255 | - | 0.486275 |
| yjiE | S4447 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 4356465 | 912 | + | 0.512061 |
| yjjM | S4658 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4553387 | 807 | - | 0.462206 |
| ylcA | S0480 | putative 2-component transcriptional regulator | SubName: Full=Putative 2-component transcriptional regulator; | chromosome | CDS | 488467 | 684 | - | 0.54386 |
| ynfL | S1748 | putative LYSR-type transcriptional regulator | SubName: Full=Putative LYSR-type transcriptional regulator; | chromosome | CDS | 1682957 | 912 | - | 0.51864 |
| yphH | S2769 | putative NAGC-like transcriptional regulator | SubName: Full=Putative NAGC-like transcriptional regulator; | chromosome | CDS | 2661322 | 1194 | + | 0.512563 |
| yqgE | S3143 | hypothetical protein | RecName: Full=UPF0301 protein YqgE; | chromosome | CDS | 3023357 | 636 | + | 0.514151 |
| yqhC | S3259 | putative ARAC-type regulatory protein | SubName: Full=Putative ARAC-type regulatory protein; | chromosome | CDS | 3138366 | 1128 | - | 0.500886 |
| yqjI | S3318 | hypothetical protein | RecName: Full=Uncharacterized protein YqjI; | chromosome | CDS | 3195888 | 624 | + | 0.536859 |
| yrbA | S3448 | hypothetical protein | RecName: Full=Uncharacterized protein YrbA; | chromosome | CDS | 3319847 | 270 | - | 0.5 |
| ytfA | S4546 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4451984 | 327 | - | 0.415902 |
| ytfH | S4540 | hypothetical protein | RecName: Full=Uncharacterized HTH-type transcriptional regulator YtfH; | chromosome | CDS | 4445678 | 471 | - | 0.518047 |
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