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# Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

>XOO3033 unknown protein
MNIRPSDLPLLVSLDALLELKNVTHAAQRLHMSQPALSSQLARLRVLFKD
PLLMPSDTGRGMVATPRADQLASPLREAIGKLSLLGKDSAFDPATSSASF
RIAAAADAIGTLGAGLAGLIQAQGNRKMRLEFVHVSSDTRLDAFENGELD
LLIDHAQAVPDALRLRRLRDERYVLVQRRGHPRGTAALSAASYSRLAHVQ
VAHAQACNLAIDAQLRHLGHTRQIAVTVSQCATARDIVLGTDMVATMPAT
LAAERGHAPLDCFELPFPLPDMALAMAWHRRNDAHAAHRWLRERVLDLLV
PAAPAAAVPAAARRTAGRADLVLSVS
>XOO1213 conserved hypothetical protein
MPHGCAASQTSRLQSRMSHDPTGNMPLKSDTFGRILLIRDGEHVFVRRDL
SVAPWVLRGIAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA
AMYQRPPHGDLAYFHSARRLLQQLHRCGVAHNDLAKEANWLVQDDGSPAV
IDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRT
SWLRELWFATGKPVYRFVTRRVLHWEDNEGQGPKP
>XOO0312 acetyltransferase
MLIRSIDAMTRPLSSEVVKASGGASQTTLPGAQAIALRGEQDADLPWLQY
LYASTRSDELARVPWPYATKRAFADQQFALQRTHYRQQFADADFLIVQAN
GLSIGRLYLHRATAHHTLVDISLLPDWRGKGIGSQLIAHAQARACDAGCA
LSLHVLHANPAAQRLYVRLGFVAGNSTQTHLQMHWHPRDHLLS
>XOO2075 transcriptional regulator
MDLEDWSARLKVFADATRVRLLALLEQEELTVAELSAITRLAQPRVSTHL
AKLKEAGLVRDRRAGVSAYYRFDEVSLDPAQRALWLALSTGSDDPLLRQD
AERVAAVLANRAADQNWADSVAGDMERHYSPGRTWEALARTALPLLETGD
VLDIASGDGVLAELVAPHATRYICIDTSARVVAAASERLRKLRNVEVREG
DMHALPFPDASFDLVVLMHALTYAAKPAQAVAESARVLRPGGRLLLCSLA
KHEHRAAVHAYGHVNLGFAAKELRKFAEKAGLDVSSLETVTREKRPPHFE
VISLIAMKPGMGSRDSGLVENKDTAARRTGP
>XOO0268 transcriptional regulator asnC family
MRCGAVFMQRHFPMISPHLSRMAAQRDCKSCVFRLQRRKIRASSFASAQH
MDHPIALDRTDLRLLALLQAQGRTSNAELAVQVNLSASACLRRTQRLEAA
GIIAGYGARLDARALGLGLQAFVRVQLEQHGQADIEHFAQGVRGWDEVVA
CWALTGDMDYLLQVQVRDLEHFSRFLLDRLLNATGVSDVNSSFVLRMVKA
PEGLPLSHLA
>XOO2162 conserved hypothetical protein
MRRCNSPANSTTAMPPTNPSEADHRMDQALITRIIEAALLASSQPLTLAQ
LQGLFPEEEPAPPGSVERALELLREACAERGVELVEVASGFRFQVKADVH
GWVARLWTERRTKYTRATLETLALIAYRQPITRGEIEQVRGVAVSSNIIQ
ALEERDWIRVVGHRDVPGKPALFGTTKGFLDYFGLKRLDELPPLSELKDI
AELEPQLPLDRDGQLDGAVPASAAMDAAQDQANADTADAEGGDSDAAADD
ADGEADANAGAEVDHSNSGSSGSRDGSEADETDAAATPAGTTDAASDHRT
KAELDPESEIDTDIDADQHAQEPASDAGWDQQDPDLDEAIGTEATNAVSE
QTPQHPEHDSAHDQHTQHPDDAREGDPDTAPGTRADAVNEDEDNAVATTT
VAVDEADSDPEADPQRVGRSQTHE
>XOO4072 transcriptional regulator marR/emrR family
MNDLAPPHPPQQPVLLDLEQFLPYRLSVLSNRISSNIAKVYGDRYGMAIP
EWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGD
DRRRSMLALSPAGRQVYETAAPLVNEKEQRLMSVFSAEEQQILEKLIDRL
AKDGLPRMASKD
>XOO4448 transcriptional regulator tetR family
MTSIALPSHDAPPSRKPAISREDLIAAALSLIGPHRSLSTLSLREVAREA
GIAPNSFYRQFRDMDELAVALIDLAGRSLRTIIGQARQRATSTDRSVIRV
SVEAFMEQLRADDKLLHVLLREGAVGSDAFKLAVERELSYFEDELRVDLI
RLAAADNAKLHAPALVSKAITRLVFAMGAVAMDSPPEKDPELIEQISQML
RMILTGARTLGTHGGGFNSGSQHQRL
>XOO3858 conserved hypothetical protein
MAARVCPAARNVGRTPLMHCPFCQHSDTRVIDSRVSEDGTTIRRRRECEA
CGERFSTLETIELKLPTVVKSDGGREAFDARKLRTSFDRALQKRPVAEEQ
IEAAVRSVVHQLRMSGEREVGSLRVGEYVMVELRKLDHVGYVRFASVYRS
FQDVADFREEIEKLERELPVGSEQLPLLEVALERAGKPGKR
>XOO3659 two-component system regulatory protein
MALRQTHSPEQACDAVLGRVLLLLGLKHGAVLAQRGPRAQVLASRGRALP
PGASAAGDGHEAAWLMPPRPAAIGEARVPIHALGTTHGMLCVAWSEDRPA
PGNDDVQALQAFALLLPAMVAEPAKQIPTRRRKPLQDDRLGALSKREKQV
LSLLPRGLTNSTMLLNPNPLVR
>XOO3710 two-component system regulatory protein
MAGMTREEILGSRILIVDDEPANVRLLEDLLQREGFQHVIATTDPLRVMG
LVSAFAPDLILLDLKMPELDGYALLEQLARLSDPGQFLPVIVLTADPSRS
ARHRALGLGAKDFLTKLLDTFEVALRVWNVAETTLLFKRLRALAAPDATP
PGWRRQS
>XOO1401 acetyltransferase
MENGLSGSATLFPIPDSRFPIPDSRFPIPDSRFPIPDSRFPIPDSRFPIP
DSRFPIKLPPMQTTTFRTATVDDIEALVLLVTSAYRGDSSRVGWTNEADI
LDGARIDPAMLREDILRERSLVLLAEQDGRLQACAHIADDHGAGYFGMFA
VDPSLQGSGLGKTLLAEAERIAHSEWQLPVMRMTVIDVRNELIAFYERRG
YRRTGIVKPFPYDDERFGIPLRQDLRFEVLEKQLNGPTP
>XOO0958 conserved hypothetical protein
MSHHAAQKYAAMLATLLLTSQAFAADPTPELKQRPPGTAQAVGAVHTLRQ
IPEACARLEGVFTGNAAQPYTLSVVRSSPTCQPRARFVDFAKAAPSVASG
WIFNDVIRVPSAACPAQQAVVRVWRKPVDAKPQLDGQGQSRIYLEEAKQQ
AAAGKIPQVPMFAAQMTVEGKGCQ
>XOO4549 transcriptional regulator
MPPKWVSWRRPYDTAGYAVISRRRVAAALASASQPERQRADRLRVAGVLT
RAQLSRGTGLTVQTAVRLIEDLQARGMVQMGEAVARSGRGKPAMAVSLNP
GYGHTLGISIATDARTLALADLSGSVLAVSEVALTDDTLCGVLTRLQAAD
ATLLACVDAAGTRLGIGVAMSGFFTGDDAFINPPEPLRALGWIALCSWLA
EAFGQPVRMDNDGSVAAAGEAMLSVGQRHRDVA
>XOO2344 hypothetical protein
MKDIDESTLLAYADGALTPDQAGRVEAVLAADPQRAADVRQLQQVKARLR
NGYASVLEEPIPAHLLDAARQRPPPSPQTSVVTATAPIQAPATRQHATRR
WAVPTSIAAALLIGLWLWQRQPAQPAPSALLAEQGHDASGTLALALDRQL
SGEQQGKIRMGLSFRAHDGRYCRSFSLQSSHAGLACRQGERWRIEAVSPL
QPQRNDSELRMASSTLPAALLDAIDARIDGQALDAEGERSARARHWR
>XOO3920 transcriptional regulator gntR family
MLRAFGGEYGLVHAGQIGTILDLTNPRRSGGQAMAKPRTNARTDDDPRVE
ALALDVSAPTPLYLQLATKLTDAIRGGQWKAGEALPAERQLCERLQISRV
TLRQAVDVLVEQCLVSRRQGAGTFVTTQIQHQLSGLASFSETLRIKGYEP
GTRWLERRLRPAHGEEILRLGLSPDAAVASLTRLRSADDRVMAYEHAVLP
QRIVADPQHIGDSLYSYLDAQGTPVVRALQYFRAINLPARLAEHLRMKTG
EAILHVVRVGYARDGSAIELTDTYCHNDFYDFVAELRR
>XOO1406 conserved hypothetical protein
MLRVTKLTDYATVVLTVLAARCDQVLSASELAEQAGLEAPTVSKILKPLS
QAGLVEGLRGVHGGYRLARAASDITLVEIVEAMEGPLAITECSHNHSQCG
IAHTCGVRSNWRLINDVVGDALRRVTLAQMLQPLSHPDDTRQRSIAARVA
TT
>XOO2045 conserved hypothetical protein
MTPHASPQIITLNPASDAGALRAVRLACVTDTAGATSGAEWDALDPLSLH
LAARTEDGQLIGSVRLTADRRLDRLGILPDWRRRGLADQLLAAAVDTARQ
HGWPSLHASPSPNAEAVFARQGFLPDTTLVPLPERIGQTHAAPGGVVHRR
LDGPMAVETLTAALAATTGLLCAARRQVLIYTRALDPTLFDNAAVLDALR
RFATARHDKRVHVLMQDPASANAGSSAMLRLAQRLPSVFRFRAVSDPVDA
SFASVYVVGDDAYYFRPTVHRFDDGETWLSGAARSRQLEREFAQIWERSA
LWNEPRALGI
>XOO4219 transcriptional regulator MarR family
MRMGHIARTGTPAAFVARTAMPVTALAAPLPDAVTEVDQARLLRLLGYRI
TRTELLVRRMFQECVAAFDLKPVDFSLLMLVDGNPGINQRQIGDVLHVSP
PNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTASGAALLTAAEAEVRRM
EQQLSAVLGSSEAPLLRALDRLDRLDSRP
>XOO4350 transcriptional regulator lysR family
MELRHLRYFLAVAEEGNFTRAAARVGIGQPPLSQQIQTLERELGTPLFRR
THSGAELTLAGEAFLGEVRRVLADVERAAETARRVARGESGRLRLGFTAS
AAFSPVVPRLIRDFRRTWPQVELLLDETNTASLLVGLAEGRLDAAFVRYG
LSTPADLQLLRFTDEPMKIAVPAAHPLATRNSAPLAALAGEPFILFPRSF
GSSLYDEILAACRESGVTLRITQEAPQMSSIINLVAAELGVSVVPASTAQ
LQRPGVRYLDIEGHMPLARLALAVAPAALETTPLVRHLWALAELI
>XOO2124 transcriptional regulator
MDACAMHDLNDLYYFAMVVDHGGFAAAERALGIPKSRLSRRISQLETDLG
VRLLQRSTRRFAVTDVGTSVHRHAQTMLAEAQAAREVVDRLSAEPRGLVR
VSVPVSLAQIQLPKLLPEFLAKYPKVRLQLNISNRRVDVINEGYDIALRV
RSRLDDDGSLVMRSFGQVQELLVASPKYLDRAGRPKDPSELANHTTMSTS
EDEAHQRWELHGPNGERRVDLQPRLAGFDFPLLQSMARDGFGITMLPETV
CAEAVRSGELEVVLPHWSLPQGICHAVFASRRGLLPAVRVFIDFLAEHLP
QEIERSRLDCGGTCAELAEKLKRAAGTAPRLVVAEAG
>XOO1688 phage-related protein
MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAA
LERGVDVMYVLSGHRAQLDPADRLLLSAFKDASPAARNAVLAALGLSADA
SSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK
>XOO0386 transcriptional regulator
MNSRVRELREASGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIAR
LFGESIEHVFLYEDAQ
>XOO2798 two-component system regulatory protein
MPSRPLLCVDDESSNLATLRQLLRDDFALVFAKSGGEALDAVTRHTPKLI
LLDVELPDMDGYAVARALKQQPSSNAIPILFVSSRNSEHDERLGLEAGAA
DYVSKPYSPTLLKARIATQLKLAENVRLAQQYRDAIHLLGTAGRGQDANT
GAHIWRMAVYARVLAEAVGWSPQQAQTLQDAAPLHDAGKIAVPGSILQKP
DSLDEHERSMVRQHPQAGHDLLRHGRGAIFQLAAEIALHHHECWDGSGYP
EGLSGDAIPESARIVAVADVFDALCGRRAYKAPWTVEDAMRKLDSMAGKQ
LEPRLVQHFREALPQILQIKDAWDSPAP
>XOO0859 putative transcriptional regulator
MSVSRQHTITEAISAQIAAGEWGQDQRLPVERALAERFGCTRITLREALQ
QLEAEGRIYRENRRGWFVSASRVRYDPTSIAGFMQYVAAQGRKPRTELLS
ATRQVAGAAYAAALRLDSPYDEVFVLQRRRWIDRRAVLLETNVVLAAWAP
GLLEHDLAGSLSTVFNQQLGLFLSRAQLSMHPAGLDAAQAMLLQSAPGTP
CFRLQRISFAEDGRAVELDIESWRHDAVDVVVRTEAPTRSAL
>XOO2674 conserved hypothetical protein
MTNASPRASHGNDCSICFHCSPFGRVATRSTRLPLEVSGGAPHRPLRGTF
SRWEKRAIAMESMPALRISTDKQELDLPLIHRFLSEQAYWCLGIPLDTVQ
RAIAGSLCFGGYCEGVGQVAFARVITDGATFGYLADVFVLDAHRGRGYGK
QLVAAVMAHPHLQGLRRFMLATSDAHALYAQHGFAAPARPQALMEIAYPD
LYRTTTTAA
>XOO2206 iron dependent repressor
MANSIVLIGCVLQTMCPAPMPATIARTRVGKSEKMEAAAPVLIDAQVHME
SFRQVRQARRAELVEDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKM
LKRLVRDGWVIQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGIDEA
TARRDAEGIEHHVSEATVAAFAAFLDRQGSSAT
>XOO1188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
MCGRSLPSSEQTSRLHCMRILLVEDDLSLGEGIRTALRRAAYAVDWVHDG
VSALMALQEQTMDLVILDLGLPRMDGIGVIRTARARAVDTPILVLSARER
AADRALGLDVGADDYLGKPFDTNELLARTRALLRRSAGRTQPALQAGALR
LDPAGMSVRWHGRDLDLTRREFALLWLLMEQRGRPIGRERIQQHLYGWDE
DVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ
>XOO1057 conserved hypothetical protein
MVSFDATEALAPYREGRGYGAIVFDRERLRQADASLFSPQSWGDRARPVD
KGGRGGAWFVDAPFGRSVLRQYLRGGMAARVSRDRYLWKGAGRTRSFAEF
RLMRELIKRKLPVPRPLAACYLREGLGYRAALLMERLENVRSLADHAQLA
GRGAPWEATGQLIARFHRAGLDHPDLNAHNILFDAGGHGWLIDFDRGVLR
IPATRWRERNLKRLHRSLLKLRGNRSGEDVDKDYERLHRAYELAWGRGY
>XOO4619 sugar diacide regulator
MRWTTPASSSPAARRHVSAGCTRVHSLFERMRASSRLRIRLALVQYFPQS
NGLALSHQIARTTMRIGKARAPHADAFFYDNYRLPLLADDLRQAWQAEQL
RKPLQALLAQDRRGQLLKTLSVWFGAGMRMAPTAKALGIHRNTLSYRMQR
MQELCAVDLSNTDDCMRLYLALQMRDDSAATVANMDTASAD
>XOO3030 VirG-like two component response regulator
MSKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAF
VATNSSELAEALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMS
GHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHITSKMAAAR
GAGEGRVRFDAWEFDLQARTVGRTGAPAIALTKGEYALLRAFVDAPGRPL
SREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTLIVTQRGAGYV
FTPSVEHAR
>XOO2803 transcriptional regulator tetR/acrR family
MTTRPHRAARRSDCDRRIHAAVHALLAERGMRLSMDAVAERAGCSKQTLY
SYYGCKENLLRDVLQDHMHLAAGPLGTVSGDLRADLLAFALAHLDRLNNP
DVLQTCRLVEAESHRFPDQSQQIFHDGVVGPQQRLAHRFEQAIEAGELRH
DDPHFMAELLLSMIVGLDFDRQRFQVSHRAGLPARQQWAQFAVDAFLRAF
ATAPAAPTLAPPSLLTSRP
>XOO3527 two-component system regulatory protein
MMIRVCLVDDQTLVRQGIRSLLALDDGIEVVAEASDGKQAVEQIPQIQPD
VVLMDMRMPVMSGLEALQMLSRNGTLPPTIILTTFDDDQLVLAGLKAGAK
GYLLKDVSLEQLVGAIRTVADGGSLVQPAVTQRLLSGLEHMRNEFVSLDR
PDPLTDRETEILRLMASGFSNKEIANSLGVAEGTIKNHVSNILSKLGVRD
RTRAVLKAFELQLV
>XOO0929 transcriptional regulator
MSSSPTLNSKAKSNGPGRPKDLGKRAAILGAARAMFMELGYAGVSMDGIA
ARAGVSKLTVYSHFGDKESLFSEAIRAQCQHMMPDDLFDHAPKGALRDQL
TEIAHAFFAMVSTESAISTHRMMMAPGTGDVHIREMFWDAGPKRTQRALA
DFLSARVADGQLEIPDVTRAASQFFSLLKGELYALMMCGLQGPPTPAQVD
EHIDTSVDFFLRAYAPR
>XOO3918 transcriptional regulator lacI family
MRSDGQGTSMRRPTIKDVAERAKVSLKTVSRVINNEPSVMQATRARVLRA
IADLDYEPDPSARNLRSGTPFVIGVVYDNPNPYHIIGIQNGVLAACRETG
FGLQIHPCDSTSPLLAEELAEWVQRSRLAGVVLTAPISERPELLAGLAAR
GIKSVRIIAATDDPGNGPCVYIDDRDAAYEITEHLIQLGHQRIGFLWGGP
QHRSSGERYAGYEAALKDYGIALDKHLVIPGDYTFDDGFRGARRLLSLRE
PPTAIFGSNDEIAAGVLAAARSTSMNVPYDLSIAGFEDSPFSRQSWPALT
TAKQATDDIARHAARLLISQLRSDAYDDQPAQLQNRGFVPQLVVRGSTAP
APASTGKPLPPNPPEPR
>XOO3857 acetyltransferase
MSAMRIACVAETPAYLPEIAQAHLQAFGTLLPEWNLDEALSELCSHARDG
VIPTTWVAKDEAQWLGSVSLLENDDARIRQWSPWLASLYVQPQARGQGIG
EALVAHCVQAAARLCVPLLYLYCQPALVPFYQRLGWQTHAEFLLGPMHIV
VMRSAPGAVTR
>XOO2063 transcriptional regulator gntR family
MSGSRFQSGDGVRRRLWRVGGGYGKRDNSPRSAFPAWPACARFAVDALFL
LRASAAPTELIMNDIQWSDGAPIYRQLKERVIAMMLDGILKPGDALPSVR
QVAADYQLNPITVSRAYQELADENLVEKRRGLGMFMTQEAAQKLRGSERE
RFLTEEWPAVLERIQRLGLSIDDLLPQGKTP
>XOO1997 transcriptional regulator
MSIENSPTRIDALPPGVRTSFEKADGPVLIAFLAELREVWAPETVWHAHV
RGQLMYVEHGMLTVHTEQGTLSLPPGCAGWLPPGRQHTVEPAGPMRGWGV
GVRPDACVTLPAQGRVIRLTGLAREAIMRAASWPLDQPLDAAQQRLAAVL
LEELRQVQIDHLHLPMPADRRLLRIARQLLDTPADPRSLEQWADWGGLSP
RSLSRHFRNETGLSFAQWRQQARLAEGLRRLSQGNAVAQVADQLGYSSPS
AFVSVFHRHFGAPPARYFASSHARGLASTAASG
>XOO0600 unknown protein
MSIKAMNWAWEQRLPPNSKLILMALADSADEIGKCWPRVRLIAEKCCASE
RTVQRVLKELEERGFLHIERRFRGDGGQSSNAYYLCLESPPVNLSSPSLT
PSDKLSPGGDAAVTPPVTRQTSQGDRTVSPHEPPTRTINKSSLQLPAKVI
HTPPPSPVPGEAEKGACGALVWPSRLNERERSAIASMVSGLDANDAQMLL
DELAGVMATQSIKTSPERWFRAVLDRFHQGRFAPSAGLAAKEKRLRIQST
PAETPVQTASPEVIRHHLERIQTMLGRKGATVE
>XOO2486 transcriptional regulator asnC/lrp family
MKITPSDERLLSLLREDARASTAQIARRLGLSRTTVQSRIEKLERDGVIS
GYTVRTHDDYEQGRIRAHILITVLPKKMPAVVKALRDIPEVRLLHSVSGA
YDLIALGVVGGVNEMDVLTDAIGAIDGVERTTTSIILSTKFER
>XOO4328 conserved hypothetical protein
MNAIALFPPPSSLEGPFDATKCPVRDVLDQIGDKWTLLILLTLIPGPSRF
SAIQRAVPDISKRMLTQTLRNLERNGMITRKVYATKPPSVEYALSKLGIA
LLGPVSQLLNWAGEHHADIRAARERFDRAQQTVVTLDRDEAMA
>XOO2809 transcriptional regulator lacI family
MARVAGVSKSTVSRALGTGPVSEDVRAKVEAAVRQTGYRPNLMARRLRSQ
QSGILGVIVADIRNPYFTALIRAVEEVAYKAGMRVTLCNTDEDTEREALY
LDLMQEERITGLIFAPTRVTVGRMHELSLDYPTVLVDRAGPGSRYDSVVL
DNGAAMAELVAHLQAQGYRRIGGLFGSTSTTAAERRDGYLAAMRAQGLEP
DYREVAPAAEAAIAELGGWLANDTRPEAIVTSNSLLLMGALKAARTAGLR
LPQDLALAGFDNERWTDLVEPGITVVEQPVEDMGRAAMSLLLERLSNPQL
PIRRMVMTGRCVMRGSTGARVAGV
>XOO0935 transcriptional regulator lysR family
MAMDLASLNAFVAVAASGSFSAAGEALHLTQPAVSKRIALLEAQLSARLF
DRLGRQVVLTEAGQALLPRAQRILAELQDTRRVLEHLGAAFGGRLSLATS
HHVGLHRLPALLRSFATQHPQAALDIQFLDSELAYAAVLRGELELAVTTL
APETHAPLRAQPIWHDRLHCVVAPDHPLAARPAVSLDDVVAHPAVLPDPG
TFTHRIVANLFAERGLAPSLRMTTNYLETIKMLVSVGLAWSVLPERMIDH
QIVALPLADVALSRELGCVTHGGRTLSRAARAFVALLHAQADQAQA
>XOO3180 conserved hypothetical protein
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKR
RGNRRYYQRHDVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQ
IIKQVRMELEEVLQLLRR
>XOO1804 transcriptional regulator
MMHTATDSSVWLNRAMNDTTDSSRTTPRAGSGRGNRLSADDWAQAALDLI
AEQGVGAVAVEPLARRLGVTKGSFYWHFPSRDALLQAALERWEIFEQKEV
FGSLEDVPDPSARLRALFQLVAHEVKPHVIYSELLKALDHPAVRPVIDRV
SQRRLDYLIASFRQAGLSRTDAQHRARLAYAAYVGFLQLSLQLQQPKQAR
EDFEAYVEHVIQTLIPG
>XOO1657 acetyltransferase
MPKCTCRSARSRSDPRSSTATPSAWPCYLCAASDLPGTASLGQSARRSMS
WRTSACAAWRMGGASRQWRTATFPGAVAASRAARVRLMMREILVEPANAT
RATSGGGSELRAGDQAWGAALSMRGAPQHVAPDLVMLRPASSAGAAMSES
QDALLFHIPHSRFPTCSSAAACEKLPRRLARGARMTRIRRATPDDAEALS
LLAAQTFTETFGHLYPQEDLHGFLEETYAVERARIVLAHPDYAIWLLEMD
NLLVGHAAAGPCGLPHDDVRPGDGELKRLYLLKDYQNSGWGSRLFETALQ
WLERDGPRTLWIGVWSENFGAQRLYARYGFEKVGEYDFPVGKIVDREYIL
RHRPVLAAA
>XOO2029 Heat-inducible transcription repressor hrcA
MRASQSPMLDPRTRQLLRTLIARYIRDGEPVGSKTLAQHAGLDVSPATIR
NILADLEDVGLLSSPHTSAGRVPTAHGYRVFVDSLVQMQPPGEEEVRRLR
AELASGNGTQSLLGSASQMLSAMSHFVGVVSAPRREQFAFRHIDFVALDA
RRVLAILVFADNEVQNRVIEPRRAYEPAELERVANYLNAQFAGRALADIR
ACLLRELRMAKNEMEQLLAHSVDLASEALVPADADDMVMAGQTRLMGVQD
LSDLDRLRELFEVFASKREILQLLERTIQAPGVRIFIGEETGMVSLEDVS
LVTAPYTAHGQVLGVLGVIGPKRMAYDRLIPLVQTAADVLGAAMESPGTR
>XOO3104 AraC-type DNA-binding domain-containing proteins
MMFDLEIEPYLIKEAFAGALNVSRCMLGPDIRPRAVESAFAQAAPVEAYT
RFFRCAVRFDAGRNRMTLDAKWLAARLPGYDRTTCGLLRHQLETLIQRPP
SRNDLVESIALRLRSDAGRAPWQPELARQAIAARARCGVGSARSRSATGR
CAMPPATNARRICCAIRR
>XOO3035 serine/threonine kinase
MTTRDHDMTGRTSPPDDDRTRVRPARDLADTPSVPPAADDEVTRLAPLTR
QRAAHACDDAATRVNPLAHADDSAGASSWRRVAQLQGDAQVGVGMLLKAR
FLLVREIGRGGMGVVYLARDERKVEARDRHPYIAVKVLNDDFRRHPDSLI
ALQRESRRAQSLAHDHIVRVYDFDKDGAIVFMTMEYIEGDDLRGLIRSRL
GEGMPLAEAWPLIEGMGRALQRAHAAGIVHSDFKPGNVMVGAGNLAKVFD
FGIARAAKLAGAESSDDHTVFDAATLGALTPAYASMEMLRGDEPAFADDV
YAFGCVVYELLSGRHPFAKQSATQAQAQQLRVAALPTLSRRQMRGLRSSL
AFEAAARPTMTVLLEQLRPRSRSERAVPYLLAGVLLLAGGVGATVWMQVH
AQREKVAGVLERFSPQAPNRFAHEAHARAALWALGEDDRRRLILDHSSTI
EAFLLRRLDHYWQPALGREDYVGAQRILSVRDQWKLFSPRLDARRSAMEQ
ERDRLLNGLDTALTGAIAAGALFEDQPGNVVALLDRVRRLAPDSGLLRHA
ELELRYRRGCADALTAGRRNEARRWLDTGRRVFPQSALLRECAHELDAAT
VTASATPSAPPAPLVEDAQARLAAQIATRIESVRAAAAANDVAKVKRQLA
QIAASSPEHPFLRSEGAQRLTDAYLGLARSLCRDGRWKEASVVIGQGLDA
QDTPRLRQALGRYRLAMELEQLGTALPAPSVLQRLRERKMALQAQDADGF
RAFQSDVAKSARQRVSYTAALLPKLEPVAVMPAPPAKPSDPCRLSAPSSG
AATCSDDLGKHGRGPELVVLSKPGRALAMMRREISVADFALFCADTQRCR
VSRWTRKSAPVDEVSAALIRDYAAWLSSASGRTYRLPRDAEWLRAARAGE
DGCTATVSNSWGLLDMVGGLAEWVQEGEGVSVRGSQRGVAACASPGTVSS
NGDAARGIGARLVRDVE
>XOO1498 conserved hypothetical protein
MSIKRNSVLGVYGTFAIWAQLRIAVFSAWPYLYEGDAAYERAYLAADAAS
PESVFVLARAGETVIGASTGLPLLDDSGAFHAPFRAAGIDPASVFYFGES
VLLPAYRGQGIGHAFFDQREAHARALSRFALTAFCSVERAPEDPRKPGDY
RSTMCSGASVAMPRSLACACIWNGPSCNTARSTTA
>XOO3795 transcriptional regulator tetR/acrR family
MSEPRAAGPSGGQFHRKATATMRLVGEGAQPASGLWHCRTNLSDNAGMTT
SRPDAALRRRQILDAADEVFSEHGVNAPLELVVERAGLGRATLYRNFPDR
LALMTALMARGLDGLERMAADLADRPEGLAILLHDVAEHIAQSAPLVDFW
RSIGRAHPAVDAADRRAVSIFLPFVHRARDAGLCRADVDEEHVLLVIDML
GSCLRGNNEAERKRLAHRSADLLMHALGMQVS
>XOO2343 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
MNDLDPVVTVSDGICALLPRLRRFARAIAGHPADADDLLQVAIERALRHC
AQWRPETPLQYWLFGIIRHAWLDEVRAQRRRRQLFVSAAEGEQVGDSPME
RQQEWMAVQAAMAQLPDEQRWPIALVLIEGLSYRDAAAVLEIPIGTLTSR
LARGREALQALLEEKS
>XOO0252 transcriptional regulator lacI family
MSRPRSEGGSVTIKDVAREAQVSVATVSRTMNGHQHVAESVRERVLQVAR
ALNYIPHHAARSLSSRRTHTIGVVLPDLHGEFFSELIRGIDQVAHHQGYH
LLVSSSHGDPQAQRRALERLPGRVDGVVVMSPSLGDSGVHEDALPGCLPA
VLLNCAGSASQRPVLNVDNYGGARVMTRHLRDGGHRRIAFIAGPDDNFDA
HERLRGYHDEMAMDADAQPWVLPGNFDEESGYRAGQSLAQDTRPDAVFAA
NDMMALGCLFALGHAGLKVPQDIALAGFDDVPMARYVLPALTTMRVDIAG
LGAGALQLLLGQQLVDAPALPADAAPPALSEMVPELIVRASSAARGTPGQ
>XOO4455 transcriptional regulator marR family
MDTAAVTNAGSDALQLDNQLCFALYSTNLAMHKLYRGLLKALDLTYPQYL
VMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAVGLVSRTRAVNDER
QVIIALTETGRALRSRAGAVPEQVACASARSLDELRQLKQELEKLRSSLG
TG
>XOO0949 transcriptional regulator
MRQNTTPSFVRGAANMQQVITADRGLALTLDSDSESTSTTCLAVSRLGSI
RTNAATFTLWVQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPNVQADRSA
LCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDLCIALRLWRNAAAQSV
SASARPLLLHLAAMQRDFTEQEQRCPGRSRSRRRQVFGRMQRARLYLEGN
SDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLR
DTSMMIGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSAKPR
NVTRKATVFTQS
>XOO0683 probable two-component response regulator
MSIRASLPDADSLLSVAVLEDDALLREDILIPGLREFGFRVSGAGTAGEL
YRLMLQQAFDLVVLDLGLPDESGLSVVTYLRSLFAGLGIVVLTGNRGRSD
HARALHGGADAFLRKPTDPEILALTLRNLAQRLRTAHISVTTPSQAWRLQ
SDGWCLLAPDGTVMVLTSLERCLMRCLDAQRGQAIERETLVSALEAATGD
FDLHRLEMLIHRLRRKAARISSDRTPALPLLSSRGMGYLLAD
>XOO4461 DNA-binding protein
MSGKSIHKAEYAILLQQLRDLRLQAGLTQAELSATLGRPQSYVSDVERGE
RRMDLLQLRDFCTACDASLANFVADLERRLGS
>XOO4380 transcriptional regulator acrR family
MTALAAAAGVSTGQIYRHFPSKAELFVEVLNEAVQRETTILRAIAATQAS
AAGRLRSAIATFVRRALAGPALAYAFIAEPVESEVDAARIRGRRLFGEVF
RQLLAEGVAAGEFPQQSLDAAAACIVGAFTEALVGPIAPSRGDPQQGEQL
VEAICGFCLRAVGAMQPTS
>XOO0026 transcriptional regulator
MRAQLRTATATDLRSGELCCFSAPPCRAWSHLLAIVEAPSSCAAGISAMS
LRRERVTQLGSVSRFRLGRLLVEPERLTLIDDGQTIALEPRMMEVLIALA
ERPGEVVSAEQC
>XOO2586 response regulator
MRVIIVDDHTLVRAGLSRLLQTFAGIDVVGEASNAQQALDMTSLHRPDLV
LMDLSLPGRSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGF
VVKDAAPLELELALRAAAAGQVFLSPQISSKMIAPMLGREKPVGIAALSP
RQREILREIGRGQSNKEIAADLGISVKTVETHRARMMESLGCRRANDLVL
LAAKHHNELV
>XOO3727 transcriptional regulator marR family
MAARLSLAADLGYQLQLAALASSHAARQELAELQLTPARATALIHIRDQP
GCDQTELGNRLLVNRAAGMKIANALAEQGLIERLAGRDRRSKGLYLTDLG
ERTLLVAQGCLARAGERTCTGLQASEQQTLLHLLCKLNASAALERAAAPD
TALAEAL
>XOO3631 ECF sigma factor
MRPADHTHAARVQAPVNRIRARPLTSYRVRGSYAVLVGTPFDPQPAAPAA
TAPVSLDAFLAGIGPRAFRFAEAGLRHREDALDAVQDAMVKLLGYRERPA
AEWTPLFWSILRRRIIDLQRRRSFRLKFWAPAERADDEGPIDWADPDPDP
DTGPVDEQQHQQAYQRLVDALRTLPARQREAFTLRVLEDLDVATAAKAMG
CSEGSVKTHLSRARDALQKQFEDFL
>XOO4358 transcriptional regulator, LysR family
MAAMPDICPHSLLMRDRRTAHRHFGRLLRSDIVERAAHVDRTQEMTLFAA
LAEQASVAAVARRLGISNATVTRLTQVPSYQVREHLQNATLVCVLDAFEI
AAEPVQVVYAEGRRGSSKMRIFIDECVAALRQDLGFSTHVY
>XOO3020 unknown protein
MRQDDQRLIRLLAATLTRRPRSNLTELAAGAGISRATLYRFAPTRAAIVE
KVTAEAWVRLQAALPGGDASPDPMARLRRTTHALVEDLDLVIYIVNEMGM
EGAERGNTYYAAPEWESFQAHLDAFFLHGQQRGVFGIEMPASWWSDFYLS
CLFGAGWAVATGRLAQASVVRAVLTSFLEGARSGSRMQPSLP
>XOO1473 conserved hypothetical protein
MAIRNRMPPWHENFSLPNGRTLLLRPIRPEDGPPLQGAFSLLGPEEIRAR
FVRSTAEITPEMVQRLTHPNPKSEIVLVAAEQLPPGEALVGAVARAALVP
GTRQAEYTILVSSFVAGQGLGRQLMRKLVKWARRKYLDSLFGDVLQSNLP
MLQLAESLGFKPQAHPDSPELVRMVLELDA
>XOO2165 transcriptional regulator lacI family
MVSSYHGDPGAQGRALRSMRGRVDGLLVLSPYAEQPGFLTDNLPQSLPTV
LINAHLPGADYPVLSIDNHAGAMAMTEHLLRAGHRRIAFIGGPALNFDAR
ERLRGFRDALAAFGAQAQGVEYPGGFDEASGHRAGLAMLADGSLPDAVFA
ANDMTALGCLYAFAQADVSVPGDVALAGFDDIPLARFVHPALTTMRVSIA
RLGEQAMTRLMRLVEMPGRDDGIRQLLTPELVILASCGAGEPGQ
>XOO2588 response regulator
MSKLTVLLVDDHEGFINAAMRHFRKVEWLNIVGSAANGLEAIERSESLRP
NVVLMDLAMPEMGGLQATRLIKTQDDPPYIVIASHFDDAEHREHALRAGA
DNFVSKLSYIQEVMPILEGLTVRSQE
>XOO1507 transcriptional regulator
MAPCLRRSTPAAQQALVQATALRIAQQMPMRTQQPQDLQMRLRGALVQLC
CGSGLQPLPLGGTGRHREAGTFCGHGMTNVRETAHMIRPARERPISAEAV
SAQSQPQLPLHCPADATLHTAGLAADTTCTLAGSVPSRLERIASSTGFRM
SSLTELSTILLRHAPGDGMHPTQIVGLQIMRSGSPTVAMPSVYTPMLCLV
AQGRTQAMLGAQAYVYHPQMYLVASVDLSIVGSVIEASNAQPYLCFCLDL
DTAVLSELAINHPELVDTQRDAASAGLLLNHSTPQLQDATEAARGLPCSA
RAAQRPLQSAAAFAHVEAAPSPPQHRHHSCLLCRLLRLAHLLQPGDGRAA
LRLGNGDMRHRHVGIAAVPMLDAGRNPHDVARADLLRRLAPLLHAPGAGG
DDQRLAQRMLMPRGARARLDGDGGTAYPRRRVGLERCVDAHLAGEILGRP
HCRWRPARLVHLDRRCGFARSTSGHHR
>XOO3870 two-component system regulatory protein
MCQWLTNSVIMMRAPRLAIASTIYPAATTLRGPTSAPQTMTSMDLQPPCV
LVVDDDPDLRKLIGEFLSAHGYQVDMAENVAEMRSVMAQRRPDLIVLDVM
MPGEDGLSAARTLASERGSPAVIMLSALGNDTDRIIGLEVGADDYLAKPC
NPHELLARVRALLRRSQSSNEQSDQRGNVYEFAGWRLDVVRRDLRDPTGI
FINLSDGEFALLRTFVEHPQRVLSRDQLLECARGRDTDVYDRAIDSQISR
LRRKINERVHTELIRTVRNEGYMLLPSVSRL
>XOO0532 transcriptional regulator lysR family
MRDCMPTLRQLELAVAVAEEGGFTAAARRRNTVQSALSHQVAKIEETFGA
CLFERGTRQVRPTTADEVFLHNARQTLRAAERLHEEMAQALGTVRGRLAL
AQISSLTTVQLPG
>XOO2069 transcriptional regulator
MDRSNLMPMYAPFFHRKACHVTPAKPTPECTAGGDARRARRGAVTLRDIA
GAIGVSRATVSLVLRGSPLVHASTRACVEAELDRQNYVYNRTAANLRQRT
SSSIALVINDLSNPFFAEFAAGVNEALGAAGYVTLLGSTGESTQRQQVVL
TSLMEHTPAGIILSPAEGSQAQALSQVLGRQRNVVLFNREVEGAQWDLLA
LDNAQGAFLACTHLIAQGHRRIVFFGGHAASSSCRQRRAGYARAMQEAGL
DTLYFEAAPNRQEAALCGVRLLSSDAQAATAAVCYNDSVALGLMAALAKH
GILPGRDFAMTGFDDIAEAALFTPALTTLAAHPRARGRQAAQLVLQRIGS
PELAAQQLTAAVALKIRASSACAPVARMSSPPPSSPFAHSPTKASGR
>XOO4506 transcriptional regulator
MDTVRTPSDVGNIIRARRKRLGWDQARLAHEIGVSRQWIVDIEKGKPRAE
LQLILRALQALGLELILSSDVAQIPPANAPERGTVTPIDLDAIIEHNRSN
SRLGTTVLNAFNNNIFKNQFSSLDRLKNADLHRPFSAVDALEQCPAQAAS
AVALNRYSSMIDAPNERNLVSEPLQKRFPALDRPTIGETTKISKVISKPS
KKKADP
>XOO4005 conserved hypothetical protein
MDRYERINSLHRLLKSARYPVTVARLQDELSCSRATVYRDLAFLRDALMA
PVEGDGESGFRYLTGESDRFELPGLWLSSEELHALLASQQLLARTGGGVL
SSMLAPLQQRIEVLLAAQAGVSQWPVDRVRVIPHRGRKLDEASFRTVASG
VLERKQLSFDYRARSTDESTKRTVSPQRITHYRDNWYLDAWDHGRDGVRS
FAVDRINHARLLDAAPRDVPDSELDEQLAATYGIFSGAPKGWATIVFSAK
AARWVADEHWHSKQQGRFLPDGRYELKLPYSNSRELLMDVLHYGSDAEIV
EPMSLREQAKTLLSLALSNYD
>XOO0550 transcriptional regulator pbsX family
MSKLYERVREARSLTKLTQEALAGELGVTRSAVAQWEMAEGTAPSVENLI
GLAKRSGMAFEYLATGRGDRVFGPPVSAIAEEPAQYRRLDDQQRVLLTRF
DTLAPRQRSGLLDLLLAEGKTRRRR
>XOO1109 transcriptional regulator luxR/uhpA family
MADLTILVADDHPLFRAAVLHVLQQTLPQANVVEASSAATLSAMLRSHPQ
AELVLLDLAMPGARGFSALLHVRGEHPDIPVVVISSNDHPRVIRRAQQFG
AAGFIPKSTPAESIGTAVASVLDGGTWFPPMTAERSEADAQLASKLAQLT
PQQFRVLLSLADGLLNKQIAHELGLAENTVKVHVTAILKKLDCYSRTQAA
VLVKALEPEGEG
>XOO2932 transcriptional regulator
MKISLEALQILDAIDRRGSFAAAAKVLFKVPSTISYTVAKLEEDLGVQLF
ERVGPKATPTQAGRELLREGRHLLRAAQELEVRVRRVASGWESDVAIGLD
AVLPAALLQPQILDFYTVADSTRLRVLSESLSGGWEALLDRRVDLIVAAG
EGPSGGGYVAEPIGTLRFVFAVASTHPLASAGVLGAAELAEHRAIAVADS
ARRLLPRTVGLLSGRDVLTVPDMRTKLLLQLAGAGYGFLPEPYARGALQD
GRLREVQVETHKPDETFYLAWRPGEEGEALGWWRRALRSEGLFDSWLHAL
AATYRSVAAGQSPR
>XOO2202 unknown protein
MLDGVQEIERQFGLGAAGVAAAPVPTRLRVGASTTIGNYVLPSLIAGYRT
AWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEADLEVVPWRQDAL
VIVAAPTHALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHL
HHLDSEMQPGSTEAIKQAAAEGLGLACLSRCAVQDLVTLGRLVIVHTTLP
RLTRRFYRIQHRQKRLSGNLQRFAAHCDRLEVEPF
>XOO1247 conserved hypothetical protein
MSIFSKLITLLRGTAHETGQKAVDANALRILDQEMRDAGAQLTRSREELT
KLMAQSKLAQQKIDARAGKMAEYTRYIEGALAKNDEALAHEVAVKLAALE
SEDAGDKAAKTALDQSVVTLKATIQKTENQLRGMRQQIDTVKATDAVQKA
QAAIAARHSGASSKMGSALESLERIKARQAETSARIASAEELESSTGDGD
LNRRLAAAGLMEGESNAAAVLARFKKPAAQLGHENTSGSAPLIGQVRDVQ
QVPRSDS
>XOO2864 conserved hypothetical protein
MHTFWSVLMEATVAERGQITLPKAVRDALGLTKGTTLKIELDGGRIILRK
DVSEALRKVRGKFKLVDGLTSTDAAMRVIRGRAPGDPFDP
>XOO4618 sugar diacide regulator
MASARRIEPRQRRSAPFAQMLGHRRATRPTPNHTRGEQVRTEHATVTSLD
RINRPQPMLTLDRTLAQSSVDRAMTIIDGNVDAMDHSGVIIASGAPARFG
RLHARAQSVRAHARQQPAADPAGPGPVFSAVQRPGVVAPDRAHHHAHRQG
ACAARRCILLRQLSPAAAGRRPASGLASRAIAQAAAGIAGAGPSRPVVED
LVGLVWCRHAHGPHRQGAGHPSQYPELPHAAHAGTVRSGPEQHRRLHAPV
PGAADARRQRRHRGEHGHGQRRLSAAPPAQRAQCGAVQWRTERRLG
>XOO4051 N-acetyltransferase
MSQPAPQIRGATPDDVPLLHELITALALYERAPDAVKASLEDLRTSLFGE
GVTAHALICEQDGQALGFAVYFFNYSTWLGRNGLYLEDLFVRPEARGRGA
GLALLRHLAQLAVQRGCGRFEWSVLDWNQPAIDFYRAVGARPMDDWTVYR
LDGERLVAFATGS
>XOO3188 maltose transport gene repressor
MVNEETRKRILRIAHELNYKVDKNPSPLRL
>XOO4194 conserved hypothetical protein
MQVHNTPAEHCGMMPPLAVFQCLPMTPSCTLASALQSLQSQFIAMPPVLS
MGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLASLMTLASWGWLTLQL
QLAGHSADVYVADSQLRYVAPVYEDLVANAEPSELGSWETFLATFRQRGK
ARIGMRAEIALGSGAAAATLSGRFVAFPKR
>XOO2222 conserved hypothetical protein
MSTTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGI
LVYLILWLLIPNQAD
>XOO0190 transcriptional regulator lacI family
MQRQASLRSTAPPGPVESTQLHWLTAMPARKMPEEGMHGLPKGKVATIND
IARMSGVSKKTVSRIINNSPLVRQDTREKVEALMRQVGYAPDPLARGLAF
RRSFLIGMVYDHPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIE
GARRFAQAQKLHGVILVPRASEDQALADMLAEIGCRYTRIASIALDATSQ
TVITHDRDGAAEAAEYLLSLGHRDIALVTGPSAYRSSIERTCGFADALTR
RGIELPPERIVEAGYTFESGVAAAEKLLLGKKRPTAIFTGNDEMAAGIYK
VALRAGISIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTGRTAAAMLI
QPDNAPQLPTASVRPHLIVRESCQPPED
>XOO3155 hypothetical protein
MLSGPTTTIRPCCGSSPGQQTSRPPARREGQGWRARYACLIGNRIRRQFA
QWRGSYPSVVIDIYRFYGTICRIMDTTVDKLLELVRTRGLLRPHDLAPLG
IPRVALTRAVRRGQLERVGRGLYGLVARPVSAHGTLAEVARRVPKGVVCL
LSALRVHDLTTQAPFEVWLAIDNKAAAPKLDYPPLRLVRFSGPALSEGVE
EHVVDGVPVHVTSVAKTVADCFKYRNKIGIDVALEALREAWVARRMTSDE
IWHYAKIDRVANVMRPYLESLA
>XOO2536 transcriptional regulator tetR family
MPKSAHFSTKDRILGAAEELFAQHGFAGTSLRQLTTQADVNIAAVNYHFG
SKENLVNEVFRRRMDEMTTARLQQLEAAKKSQPGELTAVLAAFVEPALAM
AQDRQNGGAFVRVIARAYAEKNDNLRKFLSDHYGHVLREFGKAITGCVPG
LSKEELYWRLDFLAGALTYAMADFGLIKRPAGVSEADHRARAARELIRFA
EPGFRAHSTP
>XOO0405 transcriptional regulator lysR family
MHLCMADTISWERYRSFLAVLEEGSLSAASRALGLTQPTVGRHVAALEEL
LAVPLFVRSQTGLLPTDAAQALRGHARAMADIAAALQRAAGRHGALQGTV
RISASEVVGAGILPPILATLRHVQPQLRTALVLSNRVQDLLQRQADVAVR
MIRPQQDLLVARCVGEIAFGLYAHPDDVDRHGVPQRPDELTQHALVGFDT
DTPFLRGACKGFPFWEHAAFALRADSDLAQLALIRAGCGIGVCQAALPQR
TPRLLPVVPQQVGVVLDVWVTMHQDLRASAACSAVFAAWATGLSAHCATP
EIGTGIN
>XOO1191 TonB-like protein
MHLDLPVLLRIALYSSAALLTCLLLRRVLRAWLGATAAYAIWAAVPLAVV
AAFIPRLPLAPALPKMPALVAMPLTLQGGEHVWAGELSAVWLAGAVAMAV
ALWWRQRRFVRSLGALQALDGGVWAATHDVGLPVSLGIWRPRIVLPMDFD
TRYTAAERSLILAHERLRLHLHLHLRRGDLYANLLAALLLCIGWCNPLMH
LAWRAFRLDQELACDADVLTRYPGKRRSYATAMLKTQCGAAWMPTACHWN
APHALTQRVAALLGPAVDVPRARWNLRLVVALAVLVSGACRALQPAQLQG
RRVPGNPLDFSTMQPPKYPADAIAAGLAGFVELQIAVSPNGTPDHIAIVR
STPAGVFDRAVLDAARHWRFAPALVDGEAVASDVRVPVKFELDPPDPDPD
PASASAIAAMDTDTDAARTPHTVARSERVASCTQAECARRGALQ
>XOO2345 transcriptional regulator marR family
MSSFDPTASRVDHTCIRYPAFPREPAVLVRLIKHIYKRLHTHGCTLLKPY
GISPPEYEILMMLYGTPAQAITPTEVAEAASEKPANITRLTDQLCEKGLI
TRSSSPDDRRKIVLTLLPAGLALIESLLPDVCTLVNAETASMSEAEQVRL
ERLLKKLLDGVDAISE
>XOO3142 transcriptional regulator
MTATMTLMDLNLPALEMQTLFDALPDVVFFIKDSEGRYTHCNLTLVRRLG
SKLRSEIIGHSPLEVFPLPLGGSYMMQDRRVLCGELIDNQLEVHLYPNRL
PGWCLTFKRPLCEANEVIGVVGISRDLGQPDSRHSAYERLSQVMEHMQAN
FGDNLRVQSLAALAGLSVAQLERHFRRVFQVTPQQLLTKLRIESAMRLLY
GDDSIASIGQQCGFADQSAFARQFKATVGMTPRDYRALKGQL
>XOO4348 transcriptional regulator merR family
MRATYACRMAASSKPLLRIGALTLQTGAGVRAIRHYDAHGWLTSSRSANG
YRVFPAACVAQVRGRFSG
>XOO2198 transcriptional regulator lysR family
MGLKKNSLLLRICSLLSNDMAALNYNHLRYFWAVAHDGNLTRTAERLNLT
QSALSVQIRKLEERLGHALFERRGRQLHLTEAGQIVLDHADAIFATGEEL
LGTLRQTGAARQALRVGSLATLSRNFQMEFMRPLLGRTDIDLILRSGSAG
ELLRALEALNLDVVLLNRAPAGDALSPFVTDRLAEYPVSLVGTPDRLGHA
ASFAERLRNHPIILPTVDSSVRIGFDALADRLGVRPQIVAEVEDMAMMRL
LAREDIGLAVLPPIVVKDEIAAGALMEGDQLPDIVETFHAVTMSRRFPNP
LVRLLLQPAALSGSL
>XOO1231 acoK, transcriptional regulator
MQCARCYAISTTAPSATAVRQRDDSGRLLARLEHFHGLLVPLDGEREWFR
YHPLFADFLQQLLDREHPGQSVQLHQRAARWFGEHQRLAEAVRHAACGAR
RLRRSCSELHRACRQLAITADPRHACSARAATPFRPPHHPRHTGVEFHPG
APASEAWRVQSCAAVAGASA
>XOO1230 acoK, transcriptional regulator
MDEAQARPLTLLLAPAGFGKTTLLAQWHAQLSAREPGAVAWLSLDEEDAD
AARFLGHLALALQSAGADHALCAAVLHTRDQNPRETAMLLIRALRTAPRR
ISVIVDDYDRLGSSLVDDVVLRLIEHSGGRLHLLLATRRVPNLPLARLDL
QAQLSRIGSAHLALDDVEAQALLGPHVPASVVDELRRYTEGWPVALQHAR
LWLEGDAQRQQEVAARFSGRSAQIAAYLAEQVVDDLDADTRDLLLRTSPL
ERINATLADAVRQRDDSGRLLARLEHFHGLLVPLDGEREWFRYHPLFADF
LQQLLDREHPGQSVQLHQRAARWFGEHQRLAEAVRHAACGARRLRRSCSE
LHRACRQLAITADPRHACSARAATPFRPPHHPRLPCASATTAAACWHGWS
ISTACWCRWMASANGSAITRCLPTSCSNCSTANIPDKACSCINAQHAGSA
SISVWPKRCGMRHAARGDCGDLAASYIARAGSWQLLLTHGTHAVRALLRH
FDHRTIRDTPALNFTQAHLHLKLGEFSHARLLLERLRDFPAALREPLQRD
YTVMVALLRDRLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATT
AIAQGAFAVAEHYARNARAAMQRGGSDLGASQAMLSLGQSLFYRGQLRDA
EACYRQALRWCARTPQLDRVLESAAQCLLAQLHYERGRHDDAADLLYPAL
ELLEQHDGGMDVLAAGYGTALGLERLRDHSGRSALLLLEHIEQIAHGRKL
ARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSSHRWHDR
AAMGFALARWHRLAGRSSAALVILGQIEQACLANDNAWHLARTRARIALV
LQQRGEPLAALPYLYSALEHVALTQSWQSIVELGLPAKAMLRSLRQHDPH
TVGGSTRALTIQALLERLSDDDDPAGDIFSERELEVLAQLARGYSNKQIA
RRLHLSENTVKFHLKNLYRKLDARSRESALAQAQAVQRGLLRGSEPHADQ
AVATD
>XOO1268 ahyR, transcriptional regulator AhyR/AsaR family
MAKVLGFPCWLSLVGNHRYRGITMFEILASLGRDLQASQTVNSCLDRVFR
DVCALGFQSLVYDYAPVPLSMEGALITPTVFMQRNAPGDMQHVWCEHGYY
QHDPVQQRATRRNTPFVWSYRTDGDCAGVEYVGGQHRQVTRYLCDSGMGT
GVTVPLHLPGGAFATFSAAIDAVAAEALRLAESQLLPFLLLAHAFQARAQ
ELLDPQERRCHHIPLTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHL
NSAARKLGARNRVEAVVRGMHYRLLEP
>XOO1425 algH, transcriptional regulator
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEY
TLGEVLSQMGIDTDDEPLREQIVLSGGPVHPERGFVIHDDAREWDSSLEV
GQGVFLTTSRDILEAMAAGNGPRNVLVALGCAGWGAGQLEFELGENSWLT
APSDANVLFATALEDRWQTAAGRIGVDLFRLTDYSGHA
>XOO0651 algR, transcriptional regulator protein
MRARCWRLSGSVCGGRRQQLRKRRGDQSRGGAPGRRAASRRTGRRRAIGD
GKGTGRGASESAACAGRTALSLQHAGERARAGAHRSAACGDHDRRFDPVP
APLAAERRRCHRHPARRTRTHPGVPGDPAHPHGHAARLAGGSAVRTACAS
AAVDDVADAGGKRDQARAGSQARRRHRVDSGASPRRPCHAHRGRRWPGLQ
HAQPGHRHRPEAPARAAEVDLCRQGDLCHRVQFPQRGGGHHQPAIAGAAG
CCTLTAADAYRGCARPAGAGMSALRAVVAEDEALLRQSLLTLLAEVCPQL
QIVGGCEDGASALETIATQQPDVAFLDIRMPGLTGIEVARAMRQVGPRSQ
VVFVTAYDQYAIDAFEHGAVDYLLKPISHERLQAAWQRVQHAPLLASRMA
RCWRPCCSVCRHARRRPVLRRRWPGSPPAAAARRA
>XOO0653 algR, transcriptional regulator protein
MIALEEVAYFQADQKYTTVMTAAGEAVLRTPLRELLDVLDPQVFKQIHRS
TIVNMKGSLKI
>XOO4008 algR, two-component system regulatory protein
MTATQVRVLIADDEPLARERLRMLLGEHPQVEVIGEAENGQQVVQQCEHL
HPDLVLLDIAMPGVDGLGTARLLRQSQPPPAVVFCTAYDQHALSAFDAAA
LDYLMKPVRPERLASALEKVATFLAGRAPGTAPRPVRTHLCARLRGSLRL
IAIGDIRYLQAEEKYVIVHHTRGEDLIEESLKSLEDEFADHLVRIHRNCL
VARDELVELRRSGDGQVHAVLRNVPQTLEVSRRCVASLRDQLRQL
>XOO1849 algU, RNA polymerase sigma-H factor
MQRRQRCIGAATLMRDGRTDRYELFFSMAVSLPDFGGLTGVRPDMAEVDT
PQELDLELVRRVQRGESAAFDVLVRKYQHRIVALIGRYIADWSECQDVAQ
DTFVRAYRAINSFRGDAQFYTWLHRIAVNTAKNHLVAHNHRPPSDDIEIS
DAEHFDGATRLRDTDTPERELMRQELEQTVMRAVQALPEELRSAITLREV
EGLSYEDIARKMDCPIGTVRSRIFRAREAIDIKLRPLLETESATRERYRV
>XOO4166 ampR, B-lactamase regulatory protein
MLDESEAHHRAALEGVGVALGRVTRARLLLESGQLVALSTQRLKTSWSHY
LVYPPRSSTHGGFLAFRAWLQAQA
>XOO1369 ampR, transcriptional activator ampR family
MPRPRLPLNALRAFEAAARHQNLTRAADELCVSQAALSHQIKALEQQLGT
SVFHRLPRGVALTDEGAALAPVLGEAFDRIAATLERFADGRYCEVLSVGV
VGTFATGWLLPRLAAFHAAHADIELRLSTHNNRVDLAGEGLDLAIRFGDG
DWQGQVADAVMEAPVAPVCAPAMARVPLLRSYRLDEWPQWFRAANVTEVP
ARGTMFDSSLTLASAAAAGIGVALLPLPMFRQDLDAGRLVCPFPITIDAG
RYWLTRLRSRPESDAGRRLRDWLLAEQQINS
>XOO2895 avtA, valine-pyruvate aminotransferase
MTTSFQISRRAQALTSSAIREILKVTERPEVISFAGGLPSPATFPVERMR
AASDQVLRDAPQAALQYGPTEGFAPLREWVAARLSRDGASIRPSQVLITT
GSQQGLDLLGKLFIDEGSKVLVETPSYLGALQAFSLFQPGFVGMPSDEDG
VVVDALDPALLADARFLYCLPNFQNPTGRRLPLARRQALVARAAEAGVPI
VEDDPYGELYYSGQPLPSLLSMQPDGVIYMGSFSKVLAPGLRLGYVVAPE
AVLGKLIQAKQAADLHTPSFTQRVVYQTLQDDFLDTHIPQIRALYARQCS
LMLEALDRHFPAQVQWNRPEGGMFLWVTLPPGLDGTALLARAIARNVAFV
PGAPFFATLPQTNTLRLSFVTVPGEKIDAGIQVLGELLREALDALAGQGA
>XOO1559 baeR, two-component system regulatory protein
MRTARVPRRRLKDVAFIGSLRRKSGSGGQAHAVERLKQRNTAQHALTCGV
QVIEFGLGDARTLGQQRAAVFQTGIHARVHSRKTQLLAFDLRARARLGLR
QSGVRVERVGDLTKCRLDYLLVGDDIGAFAHLRQLQIGAVTATIEQRQIQ
LRHEAPQAVACGKQTVQSVAGSAHAAAQGDRRKKRRTRRADIGIGRAQLQ
LGLLDVRALQQQRRIQGAPGTGRRISSDQTLQIAGYRRAVVADQQLQRTH
RRSVIVVALQGRHMGLIGLTALRIALVARNQPHLIVPLGNGKQRSAVGIE
RLQLLQRLRSGALGGVGTQHLSNQGTTRGIAAVGAGQVTLACGLGHRLQL
AKEIHFEIADPGIGNHQVLLVPRIQRRVVEMLPELLCADGERRQSRRLRD
TGVRTRLLYLQRSAADIAVVRQRTFNQRPQVAVWCEALQERARLFVQSDG
GRRVGVGPIGCRRGCSLRTAERGRHADRRALVGRRERAPSRQHRTGGNQA
HARPTMRNNLWNHDVGAQSQSRPTSSTRSVQVVFGNYPDLIETTGQHAMT
GKKVLLVEDDADSASILEAYLRRDGFDVAVAGDGERAIQLHRQWAPDLVL
LDVMLPKLSGIEVLSAIRRASDTPVIMVTAIGDEPEKLGALRYGADDYVV
KPYSPKEVVARVHAVLRRSVAVRAPGEPLQHGRLSVDPAAVVASVQGENG
DSVALDLTPTEFNLLALLLKTPCKAFTRSELLDACLPDSDALERVVDSHI
HNLRRKLEVHGITGVLVTVRAVGYRFQ
>XOO0429 baf, transcriptional regulator
MSEWLFDLGNSRFKYAPLHGNRAGQVQAWAHGAEAMDAAALAALPSGQIA
HVASVAAPALTQRMIACLQERFTQVRIVRTAAECAGIRIAYADPSRFGVD
RFLALLGARGDAPVLVAGVGTALTIDVLGADGLHHGGCIAASPTTMREAL
HARAVQLPASGGDYVELAIDTDDALTSGCDGAAVALIERSLQHAQRSLGA
PVRLLVHGGGAPPLLPLLPGATFRAALVLDGLATWATAAASP
>XOO1190 blaI, transcriptional regulator blaI family
MTSNSFTRVIDKNYGCNRMSISDAEAVVMQVLWDGAPREAEEVIAALAHT
GWAEPTIKTLLNRLLSKGAVAAEKHGRKYHYAPLLAREQWVQQQSEGLLQ
RLFGGRVAPLVAHFSERGKLSASDIAELKRLLKELDDAP
>XOO1101 cebR, transcriptional regulator
MPRQRKHQGVPGLRSRRACRRRRASRRSSCGGLAHRRASDRHRANNPPLV
RTDYTLAFPQRAAMAKPSERTTLTARPQMADIARMAGVSESTVSRALAGS
PVVAERTRAYIKQIAADAGYQVDPVARSLRAKRSNTVSVAVPMMHALDQP
LSDPFLMTMLALLAEELTGRGYSMLLSKLDRHQDGWVEQLARGSRSHGVI
VLGQSFEHAALDAAARDGLPMAVWGSRIDGQSYISVGSDNFQGGVLATEH
LIASGRQRIAFLGDDQLPEVAPRFAGYRHALERHGLEFDMRLHARSHFVS
EDAYRLTRAMLKKADPPDGLFAASDVIAVGAIRALFEAGHRVPQDISLVG
FDDIPLAAYSQPPLTTVQQDLGLAARLLVDRLLTLIAGEPVQSIEMPVKL
VVRESA
>XOO1208 colR, two-component system regulatory protein
MWVETKFLGASAKNSLTNEVPVRILVIEDNSDIAANLGDYLEDRGHTVDF
AADGVTGLHLAVVHEFDAIVLDLNLPGMDGIEVCRKLRNEARKQTPVLML
TARDSLDNKLAGFDSGADDYLIKPFALQEVEVRLNALSRRGKGVHTRVLE
TGDLEYNLDTLEVRRRGKLLQLNPTALKILQALMEASPAVVTRQELETRV
WGEELPDSDSLRVHIHGLRAVVDKPFDVAMIQTRHGIGYRIASPDA
>XOO3535 colR, two-component system regulatory protein
MREHTILQVGRKFVEAERAACRVAAQASQLRGGFERNRWEGRTGDTGRVW
LASVRMRTPCLLGRPGTPLMRLLVIEDNRNMVANLFDYFEARGYTLDAAP
DGITGLHLATTHHYDALILDWMMPRMDGPEVLRRLREQHQSELPVIMLTA
RDELPDKIAGFRAGADDYLTKPFALPELEVRIEALLARAHGRRRGKLLQV
ADLRLDLATLEATRAGQVLHLYPACRKLLEVLMQASPAAVTRQRLEQSLW
DDDPPDGDMLRSHIYELRRSVDGPFAEKLIHTLPRLGYRLAQLYAAEAPG
AGDSSDV
>XOO3763 colR, two-component system regulatory protein
MASRSTTRRTAWDGYRLAAENSYDVVVLDLMLPRLDGIEVCRRLRNDARK
STPVLMLTARDTLDDKLTGLGFGADDYLTKPFAIQELEARLRALIRRERR
QVGSEVLKVADLVLDPVSMRATRAGTELQLSPIGLRLLTILMRESPRVVT
RQEIEREIWGNGLPDSDTLRSHLYNLRKIIDKPFDRPLLHTVQSAGYRIA
DIAQPMA
>XOO2721 cspA, major cold shock protein
MFARVTVNRGLVQPDRYRSCFIVPLYQRLQLSLSSGFSDAAIYPSIVSGV
SKMSERMNGIVKWFNDAKGFGFITPESGPDLFVHFRAIQGTGFKSLQEGQ
KVTFVAVQGQKGMQADQVQAV
>XOO1510 cspA, major cold shock protein
MSNIERENGLVKWFNDAKGFGFISRENGEDVFVHFRAIQIQGFKSLKEGQ
KVSFTVVQGQKGLQADAVQVV
>XOO3407 cysB, transcriptional regulator lysR family
MTLTQLRYLVAIADAELNITLAAGRVHATQPGLSKQLKQLEDELGFLLFV
RKGRSLDGATPAGVEVIERARAVLSEVNNIRTYAANQRRESQGQLTLTTT
HTQARFVLPPAVAQIKNAYPQVSVHLQQAAESAALDLLGQGDADIAVVST
AGGEPSAGIAVPLYRWRRLVVVPRGHALDHPRTAPEMHALSEHPLISYDS
STRPGSSLQRAFAQMGLEPSIALTALDADLIKTYVRAGLGVGLVAEMAVN
AFDKDLRAWPAPAPIAECIAWAVLPRDRVLRDYALDLVHVLAPQIDKRDL
RRVLDGNQAPNWPLPPTWESLTQTITS
>XOO2716 dbpA, ATP-dependent RNA helicase
MGIGKSTGCCSDESRIPNPGLKCAMNEFSALPLSPALAPGIDALGYTVLT
PVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVL
CPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVV
VGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDK
HRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPT
YRQKAVAGLLLRFTPESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDME
QRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPTDTETYR
HRIGRTARAGKHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARP
AQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKIAIYPTR
SYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
>XOO1550 deaD, ATP-dependent RNA helicase
MTQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVL
GQAQTGTGKTAAFALPVLSNADLNQVKPQALVLAPTRELAIQVAEAFQKY
AEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDL
SQLKTLVLDEADEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRI
AQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALTRILEVEPFDG
MIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLD
ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRTGDAIL
FVTLREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAG
GQIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLLTPPVRGARED
AAPRERHQRADRGDRPRFEPKFERGPRADGERAPRPPRGDDAGGERPRRD
PVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDI
QDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRF
PRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE
>XOO2764 dnrO, repressor
MLQGGRSWSGVALAERLDIHPRSLRRDIERLRALGYSVHAAPGSGGGDRL
GQGAAALPLLFERRRSADRGSRPARRRAAAPAVRGMGAAAARVMARLDPL
LPRRSGQRASAAHAAMASMPAAEAEPLVDAALLAQLAAACRDRVTLRLDY
RRHSGAAITRSVEPTLRVNDGRRWYLLVWDCERQDWRSLRPARIDRAAAT
GAQFAPRSVPEEPLQLLCKAVGEAPFPCRARFRLAGTVEILAARIPPWLG
ALEADGPAHCWLGLGAPSMPALAANLLPLDLPFDAIAPDQARAALTQALN
ALCAQLARKSGQQTLRAVVRWA
>XOO0548 fis, DNA-binding protein
MNAAPSRPDSSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREM
EIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGMT
>XOO4566 fldY, transcriptional regulator
MQPTPEPNLRHLYALAVVHQAGSINAAAPQVNLSQPALTQAVARLEQQLG
VRLFDRHPGGMLATEATQLLVPRIERALTHLGRGIGVARRALRLPARPGL
ERRVSLGQLQALVAVDVAGSYSLAAVRAGVSQPAIYRAVQSLADVIEVPL
TVRRGKTMQPTPVAVRLLRQVRLALAELRAGLDDVATLRSQHAGRLTLGV
MPLARAILLPQVLARFARAHPGASVQVVEGPYDELLAHLREGGLDLLIGA
LRDPLPVRDVLQEPLFDDEPVIVARSGHPLAGQAYAFAQLLDYPWVIAAA
GTPVRARWEQLFRGHQLEPPPLRIECGAELTVRGLLLEDDWLTLMSRDQF
VFERLAGLLAEIGSAGPQLRRQIGMTIRSDWYPTRAQSAFVQTLRQVCAE
RVQTADAQGGPFRYCTQASIATPLRLCAAKSESGS
>XOO2566 flgM, flagellar protein
MTQKIEGNLPTAATLRTAATSSKIASAGEDGASPVAVTPPTDSVKLTGEA
TNLQNLQRELSQSSAIDTGRVQAVKDALQNGSYSINPDAIASRMMDLNQQ
LAG
>XOO2621 fliA, RNA polymerase sigma factor FliA
MNTTAAAQYRAVQRNNADNVVTQHADLVRRIAHHLAARLPASVEVDDLIQ
AGMIGLIEASRSYDSEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRR
ARDAAAAVRKIEQNTGRAAAAAEVAAAMEMPLPDYLRLMEDAARGQVLSL
ESRIEDHGELDTTAKGGPNPQQMMERSEFGRELGKAIGQLPEREQLVLSL
YYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGRLKVFELADAGVEID
E
>XOO3077 gacA, transcriptional regulator luxR/uhpA family
MHRACPELFTEIGCTSQQLARKTRMTIRVFLIDDHALVRTGMKMILSKEV
DVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGLEITERIVKGDYG
TRVIIVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYL
GNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLS
AKTINTHKARLFEKVGIQDNIALARLANQYGLTDPSRVL
>XOO2916 gbpR, galactose-binding protein regulator
MLQMKFSAYSIPPKNTPPQPHAMATSGIPWFNAARLKTRQLLLLLHLHEQ
RSVLRAAEAASMTQPAASKLLAEMEDMLGVKLFERHARGVEPTWYGHVLI
RRARAAMSEIGRAQEEIAALRAGCMGQASIGTVVNPGTNLVPQAIAEVKR
EFPDILVRVEMDYSRPLVAKLLDGQLDIVIGRILGPEGVGELAFEPLADE
PHSVIARAGHPLASRAGLQHADLVRHGWILPPADSVLRARLDSMFMEHGV
QAPTNAIETSSLPVTSTLLRGTDMLTALPVESVAPLIQAKLLTVLPIKLG
VRMESFGIIRRRDYNLPPGAERILQALRTTARRLYPGLRAPESSL
>XOO2886 greA, transcriptional elongation factor
MVAAGTAQGAGSMRAPMTSKGALRLREELEQLKSVKRPEVINAIAEARAH
GDLKENAEYHAAREQQSFIEGRIKQLEGELSHAEIIDITKLSAGNKIVFG
ATVTLADTETDEEKRYQIVGDLEADIKMGLIAISSPLARALIGKLEGDSV
TIDAPAGQREYEVVSVAYLD
>XOO3271 greB, transcription elongation factor and transcript cleavage
MRTHVMRASIAAPPFESACPMSRWRPPAEKSTALITPEGHARLKAELDDL
WRVRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEA
LRVVDTAPTDPNAVFFGAQVDLEDADSGELLRYRIVGPDETDAGRGWISI
DSPLARALLKKRVDDEFDAHLPAGKHTFVVVSVDYTSQ
>XOO1379 hrpG, HrpG
MKLFLVAMVNSIGPALPDAPPTTNWSDDASISPCGFCPGVGRQASASGPR
VVCARPRDVHLMNDPCPLAHGSAFLLTQDARLASQVNASIAPLSRNVSVF
SDELELLRSLRHSPCELLVFDASCVASDESSLLAWQRCHSGHPTPLIVLG
RFDCANDILDWYRAGAQEVLALPFNPHELQVRAALALSPVAHACPETQQL
SVGPYQLLRDENTVYLHGKPIVLTAREFSIAWLLFSSPGVCFRRCQLAKA
VWGSHTEFTDRTMEQHIYKLRKKLQLGNHNGAVRIRTVYSHGYKLELALQ
DKDATTMSKAVSLSLSPAHRTAAC
>XOO1380 hrpXct, HrpX protein
MTNSIGSAAYNRVRRRARRLLSFAPPPKRETGMILSTYFAAISALSYAER
LPTYTSRMLVGAWPQGLQHLQQRRDGQGAADGADDEVSLFGASGDALLIL
EYQEEAEDAYRQALKAMRGQQRQLRLLSCRNTAWLMLSQRRLSAALNCFA
QLAMDRETPPSLCGESLLGKALTHFHLGQSTLALQTLERANEVLAELESG
ASDWLRVATALRLDMIAQLRIRRSDRMVDHVFWQATLRQEDAAHAFEPSD
LRACIADLAESMPVLAQRMRHVRNLLRIVGGDTFGFDAQIDALPAAATGC
PPCARQDAQVELALAALAVGRADLAERALAGAGRHHAPRWNLEFEYCQAK
ISQALGRTEQALLLYNRYALDAVQCLRSEVQAPRLLESGTPAHVSDDISA
RLPAKYRRAYSYMITNAHRSDLSINEVAAQIGVTGRALQQAFKSATGLSP
TQVLRRYRMQSIRDELLAEGGCGSVLQAASRWGVGSRSALAKGYRQHFNE
APMETLQR
>XOO2395 hutC, histidine utilization repressor
MTAPPPIAPGTLHQRIRQDLEQRIHSGDWPPGHRVPPEHELMAQYGCSRM
TVNKVLGLLADAGMIERRRRTGSFVARQHPYLEQVALSIPDIEVEMTTRG
HVYRFALLSRQLRNVRQRVPQERALGSTGKLLALQSVHLADGRPFALEQR
VIDITTVPEALAQPFTEMAPGSWLLRNVPWTRAEHRISAISADAAQARQL
QADDGAACLVIDRHTWRGDQPVTYVRQMFLGGSYDLVARFAPGMR
>XOO4263 icfG, IcfG protein
MRNRSPSLPQQTSVAARMPWRSSLRMRVLLAATAVLVVLLAALGTVFYLG
ERAELVEAARTEVDGLTEQTAGSLAALLDSVQVSGHMLAASSSGVGLQPF
NLRALLLATLTGDPDIAAARLIIQPRTQKAGDSGFVWYVHRRGTRVVEKS
ALELGYDYRAMPWYLRTQREGRAWWSEPSLDTDGGDLYTSYNLPLRRPGD
APDTASVGMVSVDLPLQHLRKIIDQLPRDIGIQPMLLSPEGMLVLGPGPA
LNLHYSFNTYVRRSRPDLRPLQRAVAAGQPISFTHTSPDGERFLTHSAAV
GRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAVMWWWLMRQITRKLT
RPIDELTDTAEHFRRGEFEYPLQHIERDDEVGVMARAFDSARDAIRHHIA
EIGEMTAARERMHSELQIAREIQKAMLPSGRTFERASSHLETCAWLEPAK
AVGGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYK
RPDTILIAASRRLAENNETCMFATVLCGLINVVSGDYWLASAGHEPPLLI
DIDGKARPLPLETGALLGIEPQESYPVLQGRMRAGQTMLGYTDGVTEAMD
EHGARYGLERLLAALRPHRSAAAQCKAVIANVARFTGKADPYDDITLLAI
RLRQEHAGRNVAGEATTR
>XOO0338 kdgR, transcriptional regulator
MLCNRASVLRRPAPCKYKIFVYICTDTRHLTPTPRCLYPGAPHLARTCKR
MSTEHAKYRAPALDKGLDILELLARDAHPMSMGAISQGVGRSRGEIFRML
QVLEERGYLMRDADGDYVLSNRLFMLGMQQPQVQNVTEAALPVMRRLADA
ICQPCHLVAPSGDQIVVIAQMDVPSDLGLVVRPGHRRPLAHSTSGLVLFA
FQQPDVQARWLNALDTSDVAYDRARFLEDAQQTRNDGYAMHASEAVVGVV
DLTAPILQDGSATYTLTVPFIERRPELVNPQAALQALCAATAEISEALMY
HPPRALGH
>XOO3842 kdpE, two-component system regulatory protein
MVTAPQFALRCRCSFPPRHLAPMPTDLTAIPPARVLIVDDEPQIRRFLDI
SLRAQGYRVLQAGTAEEGMALLAGQGAELVVLDIGLPDRDGHEMLREIRQ
WSNVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMARIRVLLRQA
GAGSTVEESVFDDGRLHIHLGLREVTLNGEAVPLSRKEYALLALLLKHAG
RVVTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPG
VGLRFIGVTR
>XOO3442 lexA, LexA repressor
MPPLTPQRAAVLAFLQEQAQAGVSPSLAEIAQAFGFASRNAAQKHVQALA
EAGLIELLPNQKRGIRVPGGAGRDALLNLPVLGRVAAGVPIGADIGLERQ
LWLDRALFSLRPDYLLQVQGDSMIDDGILDGDLVGVHRSKEARDGQIVVA
RVDGEITIKRLERGTERIRLLPRNRAHAPIVVAADADFAIEGLYCGLIRQ
G
>XOO2942 lexA, LexA
MRKYSLVVIILNMDLTDTQQAILALIAERIDADGVPPSQTEIARAFGFKG
VRAAQYHLEALEQAGAIRRVPGQARGIRLAGQGGQTRAAAVSEPVRDDVL
RLPVLGRVAAGLPIGADIGSDDFVVLDRVFFSPSPDYLLKVQGDSMRDEG
IFNGDLIGVHRTRDARSGQIVVARIDEEITVKLLKIGKDRIRLLPRNPDY
APIEVLPDQDFAIEGLYCGLLRPNR
>XOO0692 lrp, leucine responsive regulatory protein
MTSRARELDKIDRKILRILQQEERISFTELGERVGLSTTPCTERVRQLER
DGAITGYYARLDPHYLKASLLVFVEISLAYKSGDIFEQFRRTALKLPNVL
ECHLVSGDFDYLLKARISEMASYRKLLGSTVLTMPHVRESKSYIVMEEVK
ETLALPIAD
>XOO4336 metR, transcriptional regulator metE/metH family
MLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLAVASRVLP
QLDLAEERLGQFAQGERGALRIGMECHPCYQWLLKLVAPYLATWPDVDVD
VKQKFQFGGIGALFGYEIDLLVTPDPLFKPGLTFEPVFDYEQVLVVAKSH
ALASATYVKPQQLTREVLISYPVDLERLDIYSQFLLPAGVTPRRHKAIET
TDIMMQMVASGRGVAAMPRWLVEEYAARMDVAPVRLGARGIPKQIYLGAR
ATDIAIDYLRAFIELARAPASASAYTQGPN
>XOO1472 mfd, transcription-repair coupling factor
MPSPTFPSPPLPRSGQLRAYWRAPSSPTALAWSIARAAEAHAGPLLVIAR
DNQSAHQIEADLHALLGEHSALPVVPFPDWETLPYDQFSPHPEIISQRLA
ALHRLPGLSKGVVIVPVQTLLQQLAPLSYIVGGSFDLIVGQRLDLGAEKR
RLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIR
VFDPESQRSLDKVEAVKMLPGREVPMDDASVERVLACLRERFDVDTRRSA
LYQDLKSGLAPSGIEYYLPMFFAKTATLFDYLDKRVLPVIATGVSTAADT
FWAQAQNRYEQRRHDIERPLLPPDELYQSPDALRERLNKLARIEVWASDH
ARIEEAAPLGDQPLPPLPVAAKDAPAGQALASFLSHYPGRVLVAADSAGR
REALMEVLAAAQLKPEVVADVPAFLAGTLRFGMTVAPLEDGFALDQPQIA
LLTERQLFPERANQPRRTRRVGREPEAIIRDLGELSEGAPIVHEDHGVGR
YRGLIVLDAGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPL
HSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEP
FAAGFPFEETADQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAA
FAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEI
KAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEAL
KAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITA
WDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAH
GQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFG
LAQLHQLRGRVGRSHHRAYAYLVVPDRRAMTSDAEKRLEAIASMDELGAG
FTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGKLP
DLDAGEEVRGADVELHVAALIPEDYLPDVHTRLTLYKRISSARDPEALRE
LQVEMIDRFGLLPDPVKHLFAIAALKLQANALGVRKLDLGENGGRLVFEA
KPTIDPMTIIQMIQKQPKIYTMDGPDKLRIKLPMPEGADRFNAARGLLAA
LAPG
>XOO3219 nusA, N utilization substance protein A
MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDQDVLARVTI
DHKDGTYETYRRWEVVADDVVMESPDRQVRLMDAIDEADGVDVGDYIEEQ
IENPDFGRIAAQAAKQVIVQRVREAERQQVVDAWKDRVGELITGVVKRAE
RGNIFVDLGGNAEAFIPKDKGIPRDVLRPGDRVRGYLAEVRSEPRGPQLF
ISRAAPEFMIELFKLEVPEVGQGLVEINACARDPGDRAKIAVIAHDARTD
PIGACIGMRGSRVQAVSNELNGERVDIVLWNENPANFVINAMAPAEVQSI
IVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASRLTGWQLNVMTADQVAA
KSEAEQAAARKLFMDRLEVDEEISAILVSEGFNTVEEIAYVPVGELLAVE
GFDEDIVEELRARARDALLNAALAEEEGLEGTQPTEDLLALEGMDEETAV
ALAEHGVRTSEDLSDLAADEIVDFGIEGLTQERAAALILAARAEEIARLE
RGE
>XOO3851 nusB, transcription termination factor NusB
MSKPGGHPRHGRRDGIDPVLRSRARRRALQAVYAWQISGGFAKQVIAQFA
HEQAHEVADLAYFENLVEGVLTNRAELDTALTPYLDRGVEEVDAIERAVL
RLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVLDRAAVEWR
KVESGA
>XOO3597 nusG, transcription antitermination factor
MSSRSSRSGSWLVEENQAVKRWYVVHAYSGFEKSVAQALRDRIARTEMED
RFGDVLVPTEEVIEMRAGQKRRSERKFFPGYVLVQIETHEEAGIPRIDNE
SWHLVKETSRVMGFIGGTADRPLPIRDEEADAILQRVQDGVEKPRPKVLF
EPGQMVRVTEGPFNDFNGVVEEVNYEKSRLRVAVLIFGRSTPVELEFGQV
EKG
>XOO2038 oxyR, hydrogen peroxide-inducible genes activator
MSQQIRALEAIIGTPLFERGAQAILTPLGRDLLDRARSILLDVTDLEEVR
ATAADTLVGTIRPGVSPTLGAYLMPSLVARLHREHAALRVHVREGLPTAL
ASSGLHDLVLAQLPVPGRGLHSERLLRELLHVTMAADHPLRTKACITPAD
LRGANLLTLMPDYRLAEQVAAIAMEVGANVLRDYGGYRSSRGSFPVYEDK
S
>XOO3647 oxyR, oxidative stress transcriptional regulator
MNLRDLKYLVALADHKHFGRAATACFVSQPTLSTQIKKLEDELGVSLVER
APRKVMLTPAGREAALRARSIVAEVEQMKEAARRSQDPEAGTVRLGIFPT
LAPYLLPHVVPRIRERFPRLELLLIEEKSDQLMHQLREGRLDAALLALPL
QDDQLHAEFLFEEPFVLAVPEGHPLSRHDNMTLDALSEQRLLLLGDGHCL
REQALDVCHLAGALEKSEFQATSLETLRQMVAANVGVTLLPLLAVKPPVA
RSDNIRLIRFRDDKQPSRRIGMAWRRSSAMTAFLDQLSQLFKELPDSLFT
LDQPAAGPKAVAA
>XOO2421 paiB, transcriptional regulator protein Pai2
MDALRAFAQTDLALLDWLFARDAFVALISQGEDGHPAISHLPVLYQRDGQ
HVVIEGHWARPNPQARTPGDAVIVLQGPHAYVSPTWYLDKDAAARVPTWN
DAVAHLH
>XOO2422 paiB, transcriptional regulator protein Pai2
MRDEDALGALIGRMSAHFEQCVGSGWLFEMERDRHPKPLRGLVGFRLVPS
RIELTFELSQNHPAGNIAALSDALARQASADSHAVATLMCDTLRARDGAA
>XOO0504 parB, chromosome partitioning protein
MNKPMPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPV
TQLQPGKYQPRREMDEVKLSELAESIKAQGVIQPIVARALAPGQFEIVAG
ERRWRASQLAGLTEVPVVVRELDDRTVIAMALIENIQREDLNPLEEAQAL
QRLIDEFSLTHAEAAGAVGRSRASVSNLLRLLELPVAIRVLLETRRLEMG
HARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAGKVPSALRKGK
PAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV
LERLRMQRS
>XOO3731 pcaQ, transcriptional regulator
MPRYPTSQRKAHPMTMSSVFFEHRIKVRHLRVIEALDRQKSLLRASRVLN
VTQPALTRALQEIEEIVGAPLFERHSRGVRPNAMGEVLVQTAHVVLGQLR
RAQDNFEGLLQDDALTITVGALPVAASGLLPAVLAALYRTEPTLRVRLLH
GRTDELLPKLAGNEIDLVVGRLYPLARYDALIRKVLYQDPIALVARSDHP
LFANGPVRIAEAAAYRQVLPTLSQHVERDVAQVMREHGLATRDQLRSSSA
SFTREILLGTDSIAVMPSMMVAGDIARGELRAFQLQQASQARAGGVIYRD
GAAIHKPGVRLLMRELENQLALMAEQGAVCVDDLIGEDHVLLDESA
>XOO0488 pcaR, transcriptional regulator
MSRISLETGISRAAVRRVLHTLAKLGYVGEQGRDYVLLPRVLGIGGAYAA
SSSMTAAAQPVLDGLRDQLHESCSLGVLDGDDLLYVARSETVRIMSIGLR
PGTRLPAYCTSMGRVLLAALPADTLQAYLERTTLRPPTDRTVTQAAALLE
VLARTRRGGMCLTDQELEIGLRSIAVPVRNLRGEVIAALNVGAQAGRVSL
QTMQTQLLEPLKQAAQRLGTLLS
>XOO3666 phoB, two-component system regulatory protein
MQKRILIVDDEPAIRDMVAFALRKGEFEPIHAGDAREAQTAIADRVPDLI
LLDWMLPGTSGLDLARRWRKEQLTRDIPIIMLTARGEENDRVGGLEAGVD
DYVVKPFSARELLARIRAVMRRTREDDEDGSVAVGRLRIDGAAHRVFAGD
APVPIGPTEYRLLHFFMTHPERVYTRTQLLDHVWGGSVYVEERTIDVHIR
RLRKTLEPFGLENMVQTVRGSGYRFSSAT
>XOO0423 phoP, two-component system regulatory protein
MRILLVEDEAPLRETLAARLKREGFAVDAAQDGEEGLYMGREVPFDVGII
DLGLPKMSGMELIKALRDEGKKFPVLILTARSSWQDKVEGLKQGADDYLV
KPFHVEELLARVNALLRRAAGWSKPTLECGPVALDLAAQTVSVNGANVDL
TSYEYKVLEYLMMHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRKK
LDPDGELKPIETVRGRGYRFAIPRTEG
>XOO0891 prpR, propionate catabolism regulatory protein
MPAEEGDEGVMAVPWVEYRCRRKHRANHTPLILLDLAAPDVASAQRLIHY
ETSLKRGNSMRSPATPETAGAALPVIWTVSVSRLTGLLADVIPEFDQRAR
IEQINLGFAEAVEVIGLRLRRERCDALVAGGSNAAYLRSRLALPFAHIQA
TGFDLMEALARARRIAPRIGVVTHASDVPSFRAFQHSFDLDIEHRRFVTA
EDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLYSADSVRQALEQ
AIALGAAPSTDDLAGRSATRRARRADALLGEDSAMLQVRELVQLYAPHAG
TVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYS
DGAFTGARRGGHTGLIEAAQDGTLFLDEIGELPMALQTRLLRVLEEHEVL
RVGATVPVAVDVRVVAASLQELQQLVEQGRFRRDLFYRLAALRIALPPLR
SRHDEIALLLAHYFQQLGNIASPLSPAALQRLQQHTWPGNVRELRNLVER
LCIHWKSQPHDSLSLEQLERWTPELFDTHFGNREAPRELADLATSRLQVT
ATAVRAALDRANGNRALAAQALGVSRTTLWRWMQAQASART
>XOO0448 prtI, ECF sigma factor
MDALDDDQLRAMLPALRRFARSLSGDPASADDLVQATLERALRRWRTRHT
ADALQPWLFAILYRQFLDGQRRVARWQRVVGLFAPQQPSQSASAEQVHDG
RAMLARLALLPPEQRALLLLVSVEGFSDRQVADTLGIPISTVISRLSRAR
ERLRAVNEGHVNHAPASRILK
>XOO0449 prtR, transmembrane regulator protein prtR
MTIAPPDEHALHAYVDGRLAPQQHAAVAAWLQAHPAPAARVAGWLEARCR
SATCRACRPCTGDGRHALTPAAIRRGLQQRRRAVFAVAASCVLALGLGTG
LGWQLHASRVASQRVPMAAAVAAYRLFADAGTQQGVALDVQRRAELQPWL
RTYFGNAGVVPDLRAQGHTLRGGQLLFMLEGAAAMLVYSVPIARIGLYLR
PRSGPMPTGERRDGRLLAQYWAEGDTAFALIGPATQTRMRTIAPLLRNQG
>XOO1151 recG, ATP-dependent DNA helicase
MPRARVVTPSLAVAGQAPLSSLPGVGPKVADKFAARGILSVQDLWLHLPL
RYEDRTRLTTIAQLQSGVPAQIEGRVDAVERGFRFRPVLRVAVSDASHGT
LVLRFFHFRAAQVAQFAVGTRVRVFGTPKPGQNGWEIVHPSYRVLAPDED
AGLGDSLDPVYPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDE
QLPSLRAALLTMHRPPVGTDPQQLLAGGHPAQQRLAIEELLAHQLSLRRQ
RIALQRFHAPSLPGNGTLVQQLRRALPFQLTGAQQRVFEQIARDLAQSWP
MLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALAAPTELLAEQHLNNLRD
WLEPLGIRIVWLAGKVTGKARAAAMADVASGQAQVVVGTHALMQEAVVFH
DLALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMST
YADLDVSAIDELPPGRTPVQTIVLSAERRPELVERIRAACAEGRQAYWVC
TLIEESEEPEKGARGQHGGPPRIEAQAAEVTFEALSAQLPGVRVALVHGR
MKPAEKQQAMLDFKQGRSDLLVATTVIEVGVDVPNASLMIIENAERLGLA
QLHQLRGRVGRGAAASSCVLLYQAPLSMMARQRLETMRQTNDGFVIAEKD
LELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLEEVPEIA
DRVVARWIGGAVRYAAA
>XOO2227 regR, two-component system regulatory protein
MTSPPIRTGLLVDDDTLYLRTLQRSLARRGVQTLTATDAASALSTARSAL
PDFALIDLKLGHDSGLRLIQPLREIRADMRILLVTGYASIATAVEAIKLG
ADDYLPKPANIPTIMRALGEEDDDLPEPDEEETAQEMMTPLSRLQWEHIQ
QALHETGGNVSAAARLLGMHRRSLQRKLTKRPSPGPLR
>XOO1736 relA, ATP:GTP 3'-pyrophosphotranferase
MPGEPGISTRPFSHCERGTTTRCGEGDAHVTVVISHLLVPATVSTVVTSS
SFDRLQALLQRPAVASISPALREALARAWQELPPAQTDNVPWALLGDTLD
ALALLAADEATLIAALLFDLPALRGAVTDLPWQPAERRVAVEGLLDGLDA
ADQVWALHAGREAGRNSEGLRRLLLSIIHDLRVVPILLARQLSRMRVADR
LSKEQRHALAQLTRDIHAPLANRLGIWQVKWELEDLAFRHLEPDTYRRIA
REVDETRVARERYLEAVKRTLSAALAQQGLRADVSGRPKHIYSIWRKMQK
KRLSFDQLYDIRAVRVMVDDVAACYAALGAVHSLWAPVPSEFDDYIARPK
ANDYRSLHTAVVGPEGRTIEIQIRTHEMHAQAELGVAAHWKYKEGGKGGE
KAFDRKILWMRQLLEQVQEGEHGELAGALDAELIEDRVYALTPKGEVIDL
PQGATPLDFAYHVHTMVGHRCRGARVNDRIVPLTYRLRSGDRVEIMTAKE
ADPRRDWLLASNGFLASGRSRDKVRAWFHKLDRARNVQAGKDLLDRELKR
LGLQHADLSVATRKFHADTIDDLYIQVALGDTGPNQVSRALLEAERAASQ
PAVPAPPRPTARREGLGKSKFTVEGVGNLLVQLARCCQPVAGEPIAGYLT
RGRGITVHRTDCAALARLAAAHPQRVLPVEWGKAGTGYEVDVQVRAVDRR
WLLKDITNLIAQEDAHVLEINSDNVRDTGRAQLRLRLKVSDYDQLSGLLG
KLDALPGVSEVRRLG
>XOO1548 rfaY, RNA polymerase ECF-type sigma factor
MRNCAFARIILHANPPYLPGRRHAPGHRPADPLQQPAVATPRHRAEGGRQ
LLPRPRRTGAGNRHAPVAGISRLRPGSAFSTWMYRIALNVAISDLRGRRA
DRAGCGMERIADPQAHNPVRAQQVAALYAFIAHQPPLERALLLLYLDKHS
YREIGEVLGISETNVATKLSRLKTRMRGER
>XOO1613 rfaY, RNA polymerase sigma factor
MRHAGNRTGSAPMNADTLDLMLQRDLPSAAAGCQQVDGRSALAYQNTVPP
MSLAITRDIAASEDIAQEAFLRAWQRLAQLHQPASCLPWLRQTTRNLARD
WLRANRHRARSGEAAELAIAMAADPAPSRADQLLQVEEEIAALDIMSALP
EGGRRAGIGSAAVRRHGGAQLSIPAHTATHHAPHARARCAQTRRHPGTAV
VPLHVQSGRDDGEHSGRHSADRAARHAVGDALRAGGGHRCSGSCKLFPDD
DIRVQIHLR
>XOO4301 rhlB, ATP-dependent RNA helicase
MLNLIAHVGSPGNQNGPPERAGRYIALNWGIARLNQVSVLKPRCPPQEPQ
FATLSASMQAAPGLPWAPHEDGIMSDKPLTDVTFSSFDLHPALVAGLESA
GFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPAL
ADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQ
RELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFI
KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETI
TAARVRQRIYFPSDDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTL
ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVK
YVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIE
QKIPVEPVTSELLTPLPRAARVPVEGEEADDEAGDSVGTIFREAREQRAA
EEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPA
AAAQTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVAS
TPIAAPAAPRKPTQVVATPVRAANKSSGSPSLLGRIGRRLRSLVSGN
>XOO0133 rhlE, ATP-dependent RNA helicase
MSRKADLLSLQLPPLFESALARAGVRTLTPIQVAMIPPMLAARDLIVTAQ
TGSGKTLAYALPLLQQRLQAPEQVPRVLGGLILVPTRELVAQVAQTLLSL
AAALPRRLKIVAATGGEAINPQLMALRGGADIVIATPGRLLDLVTHNALR
LSQVRTLVLDEADRLLDLGFGAEIDRILALLPAQRQSVLVSATFPPAIAS
LAKRRLRDPLRITIDATPEHAPAIAQRAIAVDAGQRTQLLRHLLQEHAWP
QLLVFVASRHTADKVAEKLSKTGIEALPLHGELSQGRRERTLRAFKQADV
QVLVATDLAARGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGKAI
SFVTAERAQQWRLIEKRQGLRVPTSVIEGFEPSPAEASARDAPDAAVRAA
DDNGGIKGKRPSKKDKLRAAAQAQTGKPG
>XOO0770 rhlE, ATP-dependent RNA helicase
MLLHLQCVCAPGLAWWRRFTWSFLMSFESLGLAPFLLRALAEQGYETPTA
IQQQAIPLVLAGHDLLAGAQTGTGKTAAFGLPLLQHLGTSPQPVNGPRKP
RALILTPTRELATQVHDSLRGYSKYLRIPSAVIYGGVGMGNQLDTLRRGV
DLLIACPGRLIDHIERRSVDLSGIEVLILDEADRMLDMGFLPSIKRILTK
LPRQDRQTLLFSATFEENIKQLALEFMRNPMQIQVTPSNTVAESITHRVH
PVDGARKRDLLLHLLAQDSREQTLVFARTKHGSDKLALFLEKSGIKTAAI
HGNKSQGQRMRALSDFKAGRVTVLVATDIAARGIDIDQLPKVINYDLPMV
AEDYVHRIGRTGRNGSTGEAISLVAQDEAKLLRQIVRMLGRDVEIRDVPG
YEPQTPIRWGNSAPGRAEQPGGDRAPRKSHARRPHGDAPRQAHAHAGPKK
PGGQRSGGPRQANAGPGAGRRDGGRGGQRPSGTR
>XOO4303 rho, transcription termination factor Rho
MSDHPSSDTGSSVDAPVEKRVRKPRVSKTAVTDEDGGAQQPNLPLPASPA
PEAPRAPQAPSRAADPAPTQTSRDGAHAGPAPSANHGGDTHGESREGGQS
QQQRFNQAQQQQNQNQAQSQGQGQQQAQAQAQGQNQNAGQNQQGQGGQGQ
GQNQQGQNQQGNRRDRFRNRRDRGPRDRFGNEGGGMPSSDGSNEPFIARP
HPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARARKQDVIFALL
KVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRF
NLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEASKGKVLFENLTPL
FPRRRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQ
QVATAITTNHPEVHMIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARH
VQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGV
DANALHRPKRFFGAARNVEEGGSLTVIATALVETGSKMDEVIYEEFKGTG
NSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHP
MDEIAAMEFLLDKMKTTKSNDEFFSSMKR
>XOO1855 rnc, ribonuclease III
MSNRIFQRGDPIGHAFADPDLLAQALRHRSAGTPHNERLEFLGDGIVNLL
VAEALYQRWPKADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGEL
KSGGHRRDSILADAVEAIVAAIYLDCGFERCRAVVLPWFEASLAALPVGK
AEKDPKTRLQEWLQARQLPLPNYALISESGDEHAKQFHVACILEQPVARA
EGQGTSRRLAEQQAATLVIAQLDSRM
>XOO3648 rnk, regulator of nucleoside diphosphate kinase
MFVHRLQIRPVQLWGCEARLRQSAGGKPCALHGLRSDMPTFFGIAASSDR
RGMRIQIAMASLARRSEIPRLAGTLHVSAMHPALRSAHGALILPMPLAVL
ASRIRQETAMTSQHSSGLPPSSLVSSHDLARREALLDSPSFNKHPAATAL
SDELGRARVLPPDQIRGDVVTMHSRIECEDQLHGGRHTLPPVHPHEADVQ
HGRICVLAPVGSALGGLSVGQRIDWRTPDGRGLRLRATAVHDQPTAAGDI
PR
>XOO2871 rpfG, response regulator
MPTAHLLHMLVQSLEQRIVRESRHRRRRHRFSVLENRGANAMQDVSGRPG
GAFSTDTWVSCAEKADMGLNIVIVDDQMSARTMLRHVIEDIAPELKVYDF
GDPLDALAWCEAGRVDLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILI
TIVGDEPIRQAALEAGVIDFLVKPIRPRELRARCSNLLQLRQQSESVKQR
ALSLEQRLLASMNEVEERERETLSRLARAIEYRDAGTSAFLERMSHVAGL
IAEQLGLSEEEVRIIEMAAPLHDMGKIAIPDSVLLKPGKLTDDEMSVMKR
HPRIGYELLSGSQNRFIQVGALIALRHHERYDGTGYPDGLVGEAIPLEAR
IVAVADVFDALLSPRPYKEAWTVDAALAYLYAQRGRLFDPRCVDALLRGR
AQLEQICGEFSTASARPGV
>XOO3558 rpoA, RNA polymerase alpha subunit
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSS
IPGFAITEVEIDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATL
SLSKQGPGTVTAADIRTDHNVEIINGDHVICHLTKDTALNMRLKIERGFG
YQPAAARRRPDEETRTIGRLMLDASFSPVRRVAYAVEAARVEQRTDLDKL
VIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGAAKPAASGVDP
VLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
>XOO3591 rpoB, RNA polymerase beta subunit
MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQEDVESTKRK
DLGLHAALKSVFPISSYSGNAALEYVGYKLGQPVFDERECRQRGMSYGAP
LRVTVRLVIYDRESSTKAIKYVKEQEVYLGEIPLMTGNGTFIVNGTERVI
VSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALF
TRIDRRRKLPVSILLRALGYNNEEMLAEFFEINTFHINPDEGVQLELVPE
RLRGETLNFDLADGDKVIVEAGKRITARHVKQLEAAGVAALAVPDDYLVG
RILSHDVVDGSTGELLANANDEISEDQLTAFRKAGVDAVGTLWVNDLDRG
PYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKEAAQNLFHNLFFTFER
YDLSTVGRMKFNRRVGRKDVLGESVLYDKKYFAERNDEESKRLVAEHTDT
SDILEVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVE
RAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLS
EVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLI
NSLAVFARTNQYGFLETPYRKVLDGKVSDDVEYLSAIEENEYVIAQANAL
TDAKNMLTEQFVPCRFQGESLLKPPSEVHFMDVSPMQTVSVAAALVPFLE
HDDANRALMGANMQRQAVPTLRSQKPLVGTGIERAVARDSGVTVNALRGG
VIEQIDAARIVVKVNEAEIGGGTDAGVDIYNLIKYTRSNQNTCINQRPLV
NVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSER
VVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVV
YIGAEVRAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVP
PGMDGTVIDVQVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILEAAI
YARLRSQIVGKVANGGANLKKGDSVTDAYLDGLKKSDWFQLRMKDEDAAD
AIERAQKQIQAHEKEFEARFADKRGKITQGDDLAPGVLKMVKVFLAVKRR
IQPGDKMAGRHGNKGVVSNVVPVEDMPYMATGESVDIVLNPLGVPSRMNI
GQILEVHLGWAAKGLGRKIQRMLEAQAAVSELRKFLDDIYNHDNAINAQR
VDLSQFSDEELLNLGKNLIDGVPMATPVFDGASEAEIKRMLELADLPQSG
QTQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQP
LGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNI
VDGEHEMVAGMPESFNVLVKEIRSLAIHMELEE
>XOO3590 rpoC, RNA polymerase beta' subunit
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSYGEVKKPETINYRTFK
PERDGLFCAAIFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRE
RMGHIDLASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFEAYVVTEPG
LTPLERRQLLTEEQYLTARQEYNDDFDAAMGAEAVYELLRTIDLQSEMTR
LREEIASTGSETKLKRLTKRIKLIEAFLESGNRPEWMVMTVLPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVITVGPYLKLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKL
VEREEAEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMSTNNILSPANGEPII
VPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV
RITQVDVDAVDGKRTSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKK
NISRLINSSYRLLGLKDTVVFADKLMYTGYAYATRAGVSIGIDDMLIPDE
KKGILTEAEAEVLEIQEQYQSGLVTAGERYNKVVDIWSRTSERIAKAMMD
TIGTEKVENAKGETIDQKSMNSLYIMADSGARGSQAQIRQLAGMRGLMAR
PDGSIIETPIKANFREGLNVQEYFNSTHGARKGLADTALKTANSGYLTRR
LVDVAQDVVITEIDCGTTEGLIMTPIVEGGDVVEPLKERVLGRVVAEDVY
LPGNDEEPIVTRNTLLDEAWVAKLEDASVQSVKVRSTISCESSFGVCARC
YGRDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVD
NITVKTTGSVKFNNLKSVAHASGSLVAVSRSGELSVLDGHGRERERYKLP
YGATITAKDGDAVKAGQSVANWDPHNHPIVSEVAGFIRFIDFVDGVTVIE
KTDELTGLASREITDPKRRGAHAKELRPIVRIVDGKGNDLTIPNTDLPAQ
YLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLPRVADLFEAR
KPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVF
EGEHVTKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKIN
DKHIEVITRQMLRKVEIVDQGNSKFLNGEQVERQRVIEENARLVKRNELP
AKYDPVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDNLRGLKE
NVIVGRLIPAGTGLAYHAGRRKASGLTDSEMETLSGKPAGAEPVAALADA
GADEE
>XOO0598 rpoD, RNA polymerase sigma-70 factor
MARALMANERPAQQSDIKLLISKGLEQGYLTYAEVNDHLPDDLVDPEQIE
DIISMINGMGIDVHEVAPDAETLLLNDGNTGNREVDDTAAEEAAAALTAL
DTEGGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQAALGVF
PLSTEMLLADYEAHKEGKKRLAEIVVGFNDLIEEADAAAAALAAAGPVAV
DEDALDEDDDEDGDDAAAEEEVGPTGPDPVEVATRMQNLANEYAKFKKVY
AKNGAEHKLVVKAREDMAAIFTTLKLPLPLTDALVTQLRGVVNGIKDHER
KVLHLATTVARMPRKDFIRSWEGNQTNLEWVEDALKRKQKWSSALRDVKD
QIISEQQGSMEMEKASYLTLGEIKEISRAMAYGEAKARKAKKEMVEANLR
LVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
RQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAK
EMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIDNT
TNINLSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEQLRSFLDID
>XOO3003 rpoE, RNA polymerase sigma-E factor
MPALMNDTDTLGDATDRMLLRRMAAGDRDALASMYQNYHSRLCRFLSRLT
RRPDIIEEAINDCFWIAWQKAGDFRGDSQVSTWIMGIAYRCGLKCLRQHD
GEAIDDTAVVEDHAPSADDNDDRELRDWLDKGMERLSPEQRLVIELVYGV
GHKLEEVADIMQCPVGTIKARLFHARVKLRNVLPGLAGGAPYTETMQ
>XOO1919 rpoE, RNA polymerase sigma factor
MQRPVSRARAIFTLAHAPLRTTARAPIPRTGAPPWQKPISGSMQCSTSPW
QCGARSLRPRPQRRWAIPSFRLPANPNTWSSTVACSWAWHSCSATSHGPI
KPALGWWSHWRSTFQSYCSATSRSRACGRSLHPRLRLPVWRSCCCSLQYC
CGSNASERHTRRSPVASPLPNPTPDRMSAIPGHDDDETGRLLTATAGGDR
HAFEALYRQTSPKLFGVCLRMIPQRAEAEEVLQDVFTLIWHKAGQFDPSR
ARGLTWLAMIARNKAIDHLRANAPQRRNVALDDAGELRANDASPLERTER
ASTRRRIDHCLAELEPPRSELIRTAFFEGITYEELAARTDTPIGTIKSWI
RRGLAKLKACLER
>XOO4296 rpoH, RNA polymerase sigma-32 factor
MLSCRTTVTQKARTFYKWNAGNSFCTRQSNSSTAKMVPMNQTTSTALVAN
NLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAARELVH
SHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFA
VHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVT
AVAKDLNVSEREVMEMESRLSGRDIGFDASSDEDDDHGPPSPVSYLVANE
EDPSQAYERHDSEDNQLQLLREGMAGLDTRSRDIVKRRWLDSDSKVTLQE
LADEYGVSAERIRQIEANALKKMKALFVA
>XOO1284 rpoN, RNA polymerase sigma-54 factor
MKLSAFERAAEQTLFSVSARMKARLQTSLAQQLVMTPQLRQAIKLLQMST
TELEVEIAEAVETNPLLEWADEAAHAASDTAVESSPSASTEESQREEAAP
AERDDDWSQDELQWTGSGSGGSFDDDESGGAAERVAESETLADHLLWQLH
LSPLSPRDRQIGAILIDALDEDGYLREPLSAILETLALGAVVDEADVLTV
LHQIQRFDPVGVGARTLGECLALQLAVLDPATPGRELALQIVAGPLERLP
RSGVAGLAHELKRSAADVEQAVQLVRSVDPRPGKQIGDLSQDTYVVPDCV
IWRQRGVWRASLAGRAQPKVTIHRGYENLIRSCGESDAGYLRGQLQEARW
LLKSLEARGETLLRVVRCLLQHQAGFLEFGAQALRPLTLREIAGELGLHE
STISRAISRKYVRTPRGTIALRSFFASGIDTDSGGEASSTAIQAMIRRLI
DAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHERVRIA
>XOO2587 rpoN, RNA polymerase sigma-54 factor
MKTTISAQLGQQLHLTPQLLQSIRLLQLDGMQLELEIRRALETNPLLELE
ELADNGDEATTNDDGASDIAAFDELPESTMWDVQSSSWNDGDDDRMQRVA
AGESTDPHVRILRELALDLDEAALGAAAFWLEQTDDAGYLTEALPMLQQL
GATRLGMTVQAVEAIRQRLLHGDPAGLAACDLRECLQAQLRALPGRVPAR
HLAARILDGDLELLAAHDYAVLARAHDAEVDDTREAVRLILSLQPRPGDD
LLQESNASVIPDVLAWHADGSWRVALNPATTHRVSINPVHERALAEAGEA
AQPLRDMLQEARWLTRGLSMRYETLLRATRAIVERQAAFLARGEEAMAPL
TLKEIADKIGMHESTISRITTGKYIQTPRGTFELKHFFAVRLEGASVSGQ
AVKAMVRRLIESEPAGRPLADEAIAGLLSRQGVHIARRTVAKYREQLDIA
PARERRRTTKPLLARAG
>XOO1148 rpoZ, RNA polymerase omega subunit
MRGRCWSPGARMARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIE
NAAASDKPTVMALREIAARRIDNALIDEVEKAERERAEREALEWAAAEVV
ADEDMSKNDD
>XOO4418 salR, sal operon transcriptional repressor
MASRPPLSSASHSNHCSGNTPTSAPCRFMSDPSCGMLQRHPCMQSRLAAL
RASRYHGPHRHTCIRHPRYRSSACASRSFRTHLKRPRLDKVRKSVRRTSR
ATTIDEVAALAKVSPMTVSRVVNNTGGVRDATRERVMRAVDKLGYTPNLA
ASALAAAQSTRIALIYSDPSGAYLRELLLGVLRVASRTPIQLVIDCWDDL
DADAERKAARKLAKGVAGVILPPPLCESKAAVLELVRAKVPVVAIASNYF
SPDVACVRIDEFTAAKEITEHLIAQGHTRIGYIAGHPNLSASTRRFEGFQ
AALEDAGLRLDLHLVQPGDYTYKSGLVAAEKLLARKCRPSAIFASNDDMA
AAAISVAHRRGLDVPRDLSVVGFDDTSAATAVWPEITTVQQPIAAMADAA
LDILLKTIRAKERTAKMVDHVVAHLLVKRDSVAAPTADDAVE
>XOO1870 scoF, cold shock protein
MQRSRITMPNGTVKWFNDAKGFGFISPEDGSADVFAHFSAINSKGFRSLQ
EGQRVSYDVTQGPKGAQASNITPVE
>XOO4601 slyA, transcriptional regulator for cryptic hemolysin
MVAARQWQRLADQAFAEFELSSACTGPLLMIGRSGGGIRQVALAQQLGME
GPSLVRLLDKLAAQGLLCREADSSDRRANQLWLTEDGQVLVGRIEIRLDV
LRAEVFGTLSDTDVQGVLTLWEQIAQAHARSRCWAACFSLPVGCNRENAD
QDRRPGAADPGNGGGGRVGVAVPVARVHAGAVDARCTCRRRCDAAGDRSG
ARQRGRAGGRQ
>XOO4341 smeR, two-component system regulatory protein
MTHGAAPAGADGMSSLPPIGHVLIVEDEPRLAAVVGAYLHAGGHSHDWIA
DGAQALGAFRAKKPDLVLLDLMLPNRDGLEICRDLRKESAVPVIMVTARV
EEIDRLRGVEIGADDYICKPFSPREVAARVQAVLPRHRHDPYGAPAPGLH
IDEDACRASVDGRALDLTQVAFRLLRTLAAAPGRVCSREHRMGRLSADHR
SVTDRTVDSHVKNLRRKLADGEDWVRSVSGAGYRVEPSFGIRDWRFV
>XOO1257 soxR, transcriptional regulator soxR family
MQRALSVGEVAKRSCVAVSALHFYERKGLISSLRTAGNQRRYARDVLRRI
ALIRVAQRLGVPLQQVLDAFSVLPEHGTPTRAEWARMSARWRGQLDACIN
ELQALRDQLTDCIGCGCLSLRRCRLSNPDDAMGQRGEGALRLGSLIVD
>XOO1149 spoT, pentaphosphate guanosine-3'-pyrophosphohydrolase
MNPGPTAQATVVTSPSSDQAIPDYVLHLERAASYLPKEQLPILRRAWEVG
ATAHAGQTRKSGEPYITHPVAVAGVLAELGLDMESLIAAILHDTIEDTPL
TREELAFEFGEAVAELVDGVTKLDKLKFRDRQEAAAESFRKMLLAMSRDL
RVIMIKLADRLHNMRTLGAQSTEARGRIARETLEIYAPIAQRLGMSLIKS
ELQNLGFRALYPWRHAIIEKHIRSQPVVRRESMAQVEVQLSQRLAKEGLE
HRLVSRIKTPWSIYSKMHEENKSFDQVMDVFGFRLVVRTVADCYHALGAV
HASFKPLDGRFRDFIAIPKANGYQSLHTVLFGPYGSPIEVQIRTEEMDLI
AERGVAAHWTYKVGSASPNSAQSRAHDWIVELIDSQRAAGSSLEFLDNVK
VDLFPDEVYLFTPKGKILALPRNSTALDFAYAVHTDVGNRAVASRVDKKL
VPLRTKLVSGQAVEIITARSATPKPQWLEFVVSSKARTAIRYQLKQLEHE
DAVQLGHRMLDRALEAMDSSLERLPKGRLDAFLNEHRYPRLEALLADVAL
GNLMPNQAAQALMAYAEMRGGGHSKHSHEKILIDGSERGVISFANCCQPI
PGDEIMGYHTAGKGIVVHRLDCPNLAELRKSPERWVPIDWDSSVTGDYDT
ALVVEVENRTGVLAQLAAAIAQSQSNIERVDYLDRDFNAAVLRFNIQVRD
RRHLAEVMRRLRRLHVVQSVGRQ
>XOO4543 tcsR, two-component system regulatory protein
MAEERGLGIRRSGLPVPGHLSPQPCSVELRCRDRRFSDIGYCESRFAFRN
PCSYESQHPNPESRAFTNATSPIPNPGPSMTTLLIADDHPLFREALRGAV
QRVMPGVQLLEADNVDALYTLADAQPDADLLLMDLNMPGAQGFSALVHMR
SLHPQLPVVVVSAREEPTVMRRAIDHGAFGFIPKSADSDTIGRALATVLD
GERWIPAEAQNLPPTDSEEREVGQRLRDLTPQQFRVLQMLGAGRLNKQIA
YDLGVSEATIKAHVTAILRKLGVTNRTQAVLMAGKLAIDADGIVLPPPED
D
>XOO1105 tctD, two-component system regulatory protein
MAAAYSREAVMDLSLRGGGLGSRDWELVKSNCNGRKLLCARPVTFRPRPS
AVTHPQSLFTNPSPMRLLLVEDNADLADAIVRRMRRSGHAVDWQADGLAA
ASVLRYQSFDLVVLDIGLPKLDGLRVLAGMRERGDTTPVLMLTARDGIED
RVQALDVGADDYLGKPFDFREFEARCRVLLRRNRGQASEVVQIGGFVFDN
AAHTLTLDGVPIELPNREYRLFDILIGRLGRVVGKDEIGNGLFGFDDDAG
PNAIELYVGRLRRKLAAAPLRIVTVRGAGYKLEEADPHAPVEPGADG
>XOO2225 tex, transcription-related protein
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTG
GLDDTQLRNLETRLTYLRELEERRAVILSSIGEQGKLSDELRDEIVAADT
KSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFI
DAEKGVADSKAALEGARAILMERWGEDAALLGELRSWLSDNGVIRARVAE
GKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLYLDLDPGSDAE
AGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQ
AREKAEAEAIAVFGDNLKDLMLAAPAGPRVVLGLDPGIRTGCKIAVVDAT
GKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK
LAGEAIALCGAVKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSI
ARRLQDPLAELVKIEPKAIGVGQYQHDVDQYRLAKALEARVEDCVNAVGV
YVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKT
FEQCAGFLRIADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSF
LRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAAQFAEGIEDIK
HLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVK
AGDIIKVKVLEVDVARKRIALSCRLSDTPAPTDGSAQPREARGNGPGQGR
RDGGGRVQAQANSKPRITVPPADNALAEAFARAKRS
>XOO2204 tlpC, methyl-accepting chemotaxis protein
MALRGHAGMTRLRAHATAGLHALAYRSSYGSVRGASGRCRTPPLSHFPAR
QPWRRYRHQLSPVLPRPRARSPPRLPTRPIMSMEPWAYQLMDLQMPRVDG
VEAIQRIHQVDAAAKVIVLPTYTCDARAVRALQFGACGYLLKSGLRRELV
DTIRDVGNCCQALAPRPDKAKRVIGPLHAEANVESTPPQNPHAHPKMDLL
ALTYPLIAAGEPLQYGYHRPLIKIPTIALCHWRSVIYFLNAFRGNAMLRH
SLRVRLLLPVLALGLVVMSGLTVVLAFTEAKRIESETQASIGRTSILTQT
MFSLTRTMLLDRVNATIRHLHKESDALGLASQGNEVHVGGRIANDLLLGQ
KSQANTFSLVDSAASILVDDGASSSKQGNATLFSRVGDDFVRISTSFTNA
DGRRAVGSVLDPNSQAAIKLRNGESFYGVVDILGNPYVAGYEPIFAGNEK
RVIGAWGVAHKADTPELATVIGSRRVLSSGFVAVLDIKNKLRFQSDTGST
TDRATIERIVKEKPQDWVVVKEEIRDWGFTLVSAYPKSDLNALILHQSLW
IAGVGLLICALMVGVQSALIWDRVLRPVQNLTAVAEELSMGKWNHTIAEV
NLKDEIGTLARAISRLSNSVRLAMERLNKR
>XOO3253 trpI, transcriptional regulator
MRYIDKIAATCDLESHMTVLLPPLAALRAFEAAARLQSVSRAAQELHVTH
GAISRHVRSLEQALGTALFARQGRGLVLTAAGVRLGDATGEGFGVISQTW
AALQRPVAEAPLVLGCSGSLLARWVIPRLGLLQHDLPDVRLHLSASEQPP
GPDLDGLDAALLLDTPPWPSEWQVHALGVEWIGPVLSPQLASTLRIDGND
PTTLCHHALLQTRSRPQAWPEWAQAQGLEPEALRFGTEFEHLVYLLEAAA
AGLGIAIAPQPLVAADLAAGRLLAPWGFTATHGRWVLCAAKRNPDPRIGR
LADWLGKALAEDQHTSPAMDATKIADVRCSTASPAQGW
>XOO3449 uidR, transcriptional regulator uid family
MQAPCRPPPMSNVLLLRTAKQREEGLLDDVLDAAERCIDEIGLAATSFEL
IAERTRLSCRSLLQRFEDKDALVRALLERNYMRPIRQMWLVERPADVHVV
DFIAGLLEDWLLQQINIKRTRIDLELHLATLRDPVLAAFVRLQSASLIEH
LSALLKRLLRGHTDTASSEHEFQARVFAVAAMCGGLHSVMTSGMELKRMH
LQLILRESLSGILKSAPV
>XOO2080 vacB, RNase R
MTKKNTPDSNRPSRRKSTNAGESSTAEQQKLPGWMPDFLVRAAAGASTKS
ANKRAADKASNAASQPPAALPTPPAPRAPHPRKSGPPAPPPERFQTAAPP
AAAEFKDPHADREALRYAEPIASREAILQLLEACDGPQTAEEIAEQLNLS
DRIDALGKRLAAMVREAQLVQNRRGGYAPVQQTSLIAGVVIANPEGFGFL
KPDGGGDDLFLPPFEMRKVMHGDRALANVTGIDRRGRREGAIARVLERGM
SRMLGRFFYEHGVAYVDPDDKRIQRNVQIAPDGIGEAREGQLVVCELIAP
PDARRPAIGKIIAVLGDKLTPSLVVEMAIHGHELPHEFPQEVLDEAAAVP
LVVEPQMIGGRVDLRQMPLVTIDGEDAKDFDDAVYCEPNADGFRLVVAIA
DVSNYVRPGTPLDDEAQKRATSVYFPGFVVPMLPETLSNGICSLMPKVDR
MCFVCDMQVGGDGEVTGSRFYEAVMNSHARLTYNQVWKAVGEGDADTKAF
IGPLLPQVQRLHQLYHVLSKARTHRGAIEFETSEVRFVLDNTGEVTQAGM
LVRNDAHKLIEECMIAANVEAARYLLSMHVPAPYRVHERPPESKYEDLLE
FLKEFQLSLPAWSKVRPGDYTKLLKKVRARPDAALLESVLLRSQSLAVYS
PENNGHFGLALEAYAHFTSPIRRYPDLLVHRALKHALTGASPEKFIYTPR
QMAALSLQCSERGRRADEAEREVDERYRAAWMEKHVGGQFDGVISGVTGF
GLFVELTQSKVNGLVHVTQLPQDYYQFDPIRKTLSGERRGREFRLGDPVR
VLVLKASMEGRKIDFRLAEEGAAPEAPLPLRETSTKRKKKSS
>XOO3735 vanR, transcriptional regulator gntR family
MAERLGISRTPIRQALPALCQEGLLVQAGNRGYAVRRFSQRESLDALTVR
ALMEGMGARTVAEEGASEE
>XOO0169 xylR, xylose repressor-like protein
MTTTDVLPCMPSLFANAAIRSHYRRRSDGQAAAPRERLLLDLIRRAGQCE
RSDLPRASGLSVPGIKGIIDPLVADGLLQLGPSLRRGRGQPSAQVRLVPE
YAYSVGVSLMVDGIAVVLIDFAGQVRGMRQFTAFPLTLAVVRAQLPALLQ
VLLLAAGVDRQQLFGVGLSMTGPRIGDGTRVNPPLSLAAEWMQVELDRLV
ADCLHLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSIADGFAAGVIAAG
NVRRGAHGNVGELGRISAITGMARPTLESLRQALAADGYVLPDLHTMLQH
YDAGWPQIDAWLDAVQPTVTLAVAAIIALIDPRVIVFGARLPTDLAHRLI
ARIAFEPAPRRGVALPCPALKVGQVTAYASVLGAAMLPFKETLF
>XOO1112 ybhD, transcriptional regulator
MTIKFDLNDLQAFRAVAENGSFRRAAERIRITQPALSRRIDKLESALNVK
LFERTTRKVSLTTVGQAFMPQVERMLDDLDMALMSIGDAGSRRMGTVTVA
CVPSAAYYFMPQAIHGLHQLFPKIRISLLDGSASHVSAAVASGEADFGVS
FSGNLAPEVEFELLLQERYVIACRQDHPLSGRAQVSWQEVYGYDYITLDK
TSGNRLLLDRALSAFTPDKPSICETRHVTTLLGLVEAGVGIAAVPSIAMP
SGPHPVLATVPLVEPEVSRNVGILKRRGRTLTPTALELAELVRRMPARSR
>XOO2201 ybhD, transcriptional regulator
MRLTLRQLLIFTDVADTGSTTAAGERVALSRSATSGALNELGSLLGAQLF
DRIGKRLLLNDNGRALLP
>XOO1741 yoaA, ATP-dependent helicase
MSQLATVSIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLA
EAGTGTGKTYAYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGV
GLRSALLKGRANYLCKYRTQQARGEPRFATPEQVSQFQRIVAWSGRTQSG
DMAELEALPDDSPLLPMVTSTVDNCLGTECPFYSECFVVQARQRAQAADL
VVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPELAANFFGESFG
MRPWQELARDCMVEARLVAGAQASLQAPILALDDALRSLRAGMEGLPARG
TQWRALAKPQVREGFDAVLSSLARLGQSLLPLREASPGFDGCTARAQEAL
NRLSRWLGEDVSVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSHAAWVFTSATLAVGGEFDHIAQRLGLNDPVTLLQPSPFDWA
RQALCYLPPNLPDPAARGFGTALIGALTPVLEASKGRAFLLFASHRALRE
AAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGD
ALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFF
GVAEAVGDNGVLALPFGDDRSSYSF
>XOO1998 yybA, transcriptional regulator marR family
MLLQIYFSEKMQCMNVPSTAAPSFGLLLRQVRDALMRQLDAEMKGELPDF
GFSHYVGLKVLAVRSPCTANELALALDQTPSAVTRLLDKLEALGAVRREP
HAQDRRALQIVMTEQGVALWERLRLRGERAIEHGLRDLSAPERELLTSLL
IRVRDALNA