Gene list
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COG category: Transcription
Organism: Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
Number of genes found: 192
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| Xanthomonas oryzae pv. oryzae KACC10331, KACC10331 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | XOO3631 | ECF sigma factor | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; | chromosome | CDS | 3891029 | 678 | + | 0.688791 |
| NA | XOO3870 | two-component system regulatory protein | SubName: Full=Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; | chromosome | CDS | 4132334 | 846 | + | 0.644208 |
| NA | XOO2864 | conserved hypothetical protein | SubName: Full=Regulators of stationary/sporulation gene expression; | chromosome | CDS | 3073776 | 273 | - | 0.619048 |
| NA | XOO4194 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4471039 | 543 | + | 0.644567 |
| NA | XOO2809 | transcriptional regulator lacI family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 2993635 | 975 | - | 0.673846 |
| NA | XOO1057 | conserved hypothetical protein | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome | CDS | 1082213 | 750 | + | 0.656 |
| NA | XOO2029 | Heat-inducible transcription repressor hrcA | RecName: Full=Heat-inducible transcription repressor HrcA; | chromosome | CDS | 2128312 | 1053 | + | 0.678063 |
| NA | XOO3727 | transcriptional regulator marR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 3982676 | 474 | + | 0.668776 |
| NA | XOO2069 | transcriptional regulator | SubName: Full=Transcriptional regulators; | chromosome | CDS | 2171235 | 1194 | + | 0.640703 |
| NA | XOO2343 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog | SubName: Full=DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; | chromosome | CDS | 2484523 | 501 | + | 0.634731 |
| NA | XOO1188 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | SubName: Full=Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; | chromosome | CDS | 1216387 | 750 | + | 0.648 |
| NA | XOO0026 | transcriptional regulator | SubName: Full=DNA-binding winged-HTH domains; | chromosome | CDS | 27068 | 339 | - | 0.663717 |
| NA | XOO3035 | serine/threonine kinase | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 3259927 | 2904 | - | 0.698347 |
| NA | XOO0190 | transcriptional regulator lacI family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 194802 | 1137 | - | 0.684257 |
| NA | XOO3020 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3240975 | 579 | + | 0.673575 |
| NA | XOO0935 | transcriptional regulator lysR family | SubName: Full=Transcriptional regulator; | chromosome | CDS | 964377 | 891 | - | 0.65881 |
| NA | XOO2674 | conserved hypothetical protein | SubName: Full=N-acetylglutamate synthase and related acetyltransferases; | chromosome | CDS | 2836028 | 630 | - | 0.64127 |
| NA | XOO1109 | transcriptional regulator luxR/uhpA family | SubName: Full=Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; | chromosome | CDS | 1133582 | 639 | + | 0.665102 |
| NA | XOO2075 | transcriptional regulator | SubName: Full=Methylase involved in ubiquinone/menaquinone biosynthesis; | chromosome | CDS | 2180356 | 996 | - | 0.670683 |
| NA | XOO4618 | sugar diacide regulator | SubName: Full=Sugar diacide regulator; | chromosome | CDS | 4920252 | 891 | - | 0.667789 |
| NA | XOO2198 | transcriptional regulator lysR family | SubName: Full=Transcriptional regulator; | chromosome | CDS | 2310910 | 948 | + | 0.637131 |
| NA | XOO3180 | conserved hypothetical protein | SubName: Full=Predicted transcriptional regulators; | chromosome | CDS | 3417183 | 357 | - | 0.616247 |
| NA | XOO4455 | transcriptional regulator marR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 4743944 | 459 | + | 0.633987 |
| NA | XOO3030 | VirG-like two component response regulator | SubName: Full=Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; | chromosome | CDS | 3253076 | 780 | + | 0.652564 |
| NA | XOO1507 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1539638 | 1434 | - | 0.658996 |
| NA | XOO2162 | conserved hypothetical protein | SubName: Full=Predicted transcriptional regulator containing the HTH domain; | chromosome | CDS | 2267559 | 1275 | - | 0.663529 |
| NA | XOO2798 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 2974122 | 987 | + | 0.656535 |
| NA | XOO0958 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 992210 | 525 | + | 0.634286 |
| NA | XOO2586 | response regulator | SubName: Full=Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; | chromosome | CDS | 2737247 | 633 | + | 0.64139 |
| NA | XOO3527 | two-component system regulatory protein | SubName: Full=Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; | chromosome | CDS | 3796263 | 645 | - | 0.648062 |
| NA | XOO2932 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3139973 | 945 | - | 0.692064 |
| NA | XOO3918 | transcriptional regulator lacI family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 4179597 | 1104 | - | 0.644928 |
| NA | XOO3710 | two-component system regulatory protein | SubName: Full=Response regulator containing a CheY-like receiver domain and a GGDEF domain; | chromosome | CDS | 3968159 | 474 | + | 0.64135 |
| NA | XOO2222 | conserved hypothetical protein | SubName: Full=Putative stress-responsive transcriptional regulator; | chromosome | CDS | 2335209 | 198 | + | 0.59596 |
| NA | XOO1498 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1533445 | 558 | + | 0.623656 |
| NA | XOO4619 | sugar diacide regulator | chromosome | CDS | 4920323 | 576 | - | 0.663194 | |
| NA | XOO0386 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 389301 | 201 | + | 0.587065 |
| NA | XOO3858 | conserved hypothetical protein | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 4117828 | 576 | - | 0.618056 |
| NA | XOO2063 | transcriptional regulator gntR family | SubName: Full=Transcriptional regulator gntR family; | chromosome | CDS | 2165213 | 546 | - | 0.608059 |
| NA | XOO4328 | conserved hypothetical protein | SubName: Full=Predicted transcriptional regulators; | chromosome | CDS | 4608449 | 432 | - | 0.645833 |
| NA | XOO2206 | iron dependent repressor | SubName: Full=Mn-dependent transcriptional regulator; | chromosome | CDS | 2319457 | 552 | + | 0.655797 |
| NA | XOO3659 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 3917313 | 519 | + | 0.682081 |
| NA | XOO0683 | probable two-component response regulator | SubName: Full=Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; | chromosome | CDS | 706977 | 729 | - | 0.654321 |
| NA | XOO0532 | transcriptional regulator lysR family | SubName: Full=Transcriptional regulator lysR family; | chromosome | CDS | 555161 | 342 | - | 0.678363 |
| NA | XOO3142 | transcriptional regulator | SubName: Full=AraC-type DNA-binding domain-containing proteins; | chromosome | CDS | 3377655 | 729 | + | 0.618656 |
| NA | XOO4549 | transcriptional regulator | SubName: Full=Transcriptional regulator/sugar kinase; | chromosome | CDS | 4848798 | 702 | - | 0.685185 |
| NA | XOO2536 | transcriptional regulator tetR family | SubName: Full=TetR family transcriptional regulator; | chromosome | CDS | 2678394 | 633 | + | 0.64613 |
| NA | XOO1401 | acetyltransferase | SubName: Full=Acetyltransferases; | chromosome | CDS | 1434469 | 720 | - | 0.601389 |
| NA | XOO2045 | conserved hypothetical protein | SubName: Full=Predicted acyltransferase; | chromosome | CDS | 2149270 | 933 | - | 0.681672 |
| NA | XOO4448 | transcriptional regulator tetR family | SubName: Full=TetR family transcriptional regulator; | chromosome | CDS | 4738459 | 681 | + | 0.662261 |
| NA | XOO3795 | transcriptional regulator tetR/acrR family | SubName: Full=TetR/AcrR family transcriptional regulator; | chromosome | CDS | 4047411 | 699 | - | 0.678112 |
| NA | XOO1804 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1898380 | 654 | + | 0.651376 |
| NA | XOO2345 | transcriptional regulator marR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 2485855 | 501 | - | 0.568862 |
| NA | XOO0268 | transcriptional regulator asnC family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 281649 | 633 | + | 0.630332 |
| NA | XOO4005 | conserved hypothetical protein | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 4276285 | 966 | - | 0.632505 |
| NA | XOO1688 | phage-related protein | SubName: Full=Predicted transcriptional regulators; | chromosome | CDS | 1749350 | 438 | + | 0.570776 |
| NA | XOO4219 | transcriptional regulator MarR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 4498083 | 540 | - | 0.648148 |
| NA | XOO0600 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 627664 | 852 | + | 0.597418 |
| NA | XOO1657 | acetyltransferase | SubName: Full=Acetyltransferases; | chromosome | CDS | 1721304 | 1080 | + | 0.644444 |
| NA | XOO1473 | conserved hypothetical protein | SubName: Full=Acetyltransferases, including N-acetylases of ribosomal proteins; | chromosome | CDS | 1518943 | 543 | - | 0.666667 |
| NA | XOO2124 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 2219784 | 1014 | + | 0.662722 |
| NA | XOO4072 | transcriptional regulator marR/emrR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 4358254 | 489 | + | 0.656442 |
| NA | XOO0312 | acetyltransferase | SubName: Full=Acetyltransferases; | chromosome | CDS | 322619 | 582 | - | 0.627148 |
| NA | XOO0550 | transcriptional regulator pbsX family | SubName: Full=PbsX family transcriptional regulator; | chromosome | CDS | 572578 | 378 | - | 0.698413 |
| NA | XOO4350 | transcriptional regulator lysR family | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4627721 | 888 | + | 0.68018 |
| NA | XOO3104 | AraC-type DNA-binding domain-containing proteins | SubName: Full=AraC-type DNA-binding domain-containing proteins; | chromosome | CDS | 3328757 | 507 | - | 0.678501 |
| NA | XOO3920 | transcriptional regulator gntR family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 4182036 | 867 | - | 0.648212 |
| NA | XOO4380 | transcriptional regulator acrR family | SubName: Full=AcrR family transcriptional regulator; | chromosome | CDS | 4655774 | 510 | + | 0.672549 |
| NA | XOO2344 | hypothetical protein | SubName: Full=Predicted transmembrane transcriptional regulator (Anti-sigma factor); | chromosome | CDS | 2485020 | 744 | + | 0.674731 |
| NA | XOO1406 | conserved hypothetical protein | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1440257 | 459 | - | 0.642702 |
| NA | XOO0252 | transcriptional regulator lacI family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 269244 | 1053 | - | 0.683761 |
| NA | XOO1997 | transcriptional regulator | SubName: Full=AraC-type DNA-binding domain-containing proteins; | chromosome | CDS | 2104505 | 852 | - | 0.698357 |
| NA | XOO1191 | TonB-like protein | SubName: Full=Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; | chromosome | CDS | 1218970 | 1335 | + | 0.662921 |
| NA | XOO1247 | conserved hypothetical protein | SubName: Full=Phage shock protein A (IM30), suppresses sigma54-dependent transcription; | chromosome | CDS | 1276230 | 774 | + | 0.662791 |
| NA | XOO4461 | DNA-binding protein | SubName: Full=DNA-binding protein; | chromosome | CDS | 4749648 | 249 | + | 0.586345 |
| NA | XOO3857 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 4117346 | 486 | - | 0.62963 |
| NA | XOO1213 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1240010 | 708 | + | 0.668079 |
| NA | XOO3155 | hypothetical protein | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3390063 | 819 | - | 0.665446 |
| NA | XOO0949 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 981531 | 939 | + | 0.616613 |
| NA | XOO3188 | maltose transport gene repressor | SubName: Full=Transcriptional regulators; | chromosome | CDS | 3425306 | 93 | + | 0.602151 |
| NA | XOO0859 | putative transcriptional regulator | SubName: Full=Transcriptional regulators; | chromosome | CDS | 880648 | 729 | - | 0.647462 |
| NA | XOO2803 | transcriptional regulator tetR/acrR family | SubName: Full=TetR/AcrR family transcriptional regulator; | chromosome | CDS | 2985835 | 660 | + | 0.659091 |
| NA | XOO4358 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4635425 | 426 | + | 0.607981 |
| NA | XOO2486 | transcriptional regulator asnC/lrp family | SubName: Full=Transcriptional regulators; | chromosome | CDS | 2636319 | 432 | - | 0.664352 |
| NA | XOO4506 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4805240 | 621 | + | 0.547504 |
| NA | XOO4051 | N-acetyltransferase | SubName: Full=Acetyltransferases; | chromosome | CDS | 4338557 | 492 | - | 0.674797 |
| NA | XOO3033 | unknown protein | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3257414 | 981 | + | 0.66157 |
| NA | XOO2165 | transcriptional regulator lacI family | SubName: Full=Transcriptional regulator lacI family; | chromosome | CDS | 2271500 | 735 | + | 0.678912 |
| NA | XOO4348 | transcriptional regulator merR family | SubName: Full=MerR family transcriptional regulator; | chromosome | CDS | 4625876 | 207 | + | 0.642512 |
| NA | XOO2588 | response regulator | SubName: Full=Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; | chromosome | CDS | 2739515 | 381 | + | 0.580052 |
| NA | XOO2202 | unknown protein | SubName: Full=Transcriptional regulator; | chromosome | CDS | 2314324 | 708 | + | 0.65113 |
| NA | XOO0405 | transcriptional regulator lysR family | SubName: Full=Transcriptional regulator; | chromosome | CDS | 411213 | 924 | + | 0.678571 |
| NA | XOO0929 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 960864 | 654 | - | 0.64526 |
| acoK | XOO1231 | transcriptional regulator | chromosome | CDS | 1253367 | 513 | - | 0.654971 | |
| acoK | XOO1230 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1251962 | 3018 | - | 0.656395 |
| ahyR | XOO1268 | transcriptional regulator AhyR/AsaR family | SubName: Full=Transcriptional regulator AhyR/AsaR family; | chromosome | CDS | 1299056 | 834 | + | 0.61271 |
| algH | XOO1425 | transcriptional regulator | RecName: Full=UPF0301 protein XOO1425; | chromosome | CDS | 1454793 | 567 | + | 0.634921 |
| algR | XOO0653 | transcriptional regulator protein | chromosome | CDS | 674530 | 186 | + | 0.564516 | |
| algR | XOO0651 | transcriptional regulator protein | chromosome | CDS | 673226 | 1308 | + | 0.673547 | |
| algR | XOO4008 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 4280105 | 738 | - | 0.669377 |
| algU | XOO1849 | RNA polymerase sigma-H factor | SubName: Full=RNA polymerase sigma-H factor; | chromosome | CDS | 1950933 | 753 | + | 0.621514 |
| ampR | XOO1369 | transcriptional activator ampR family | SubName: Full=Transcriptional activator ampR family; | chromosome | CDS | 1403659 | 846 | - | 0.667849 |
| ampR | XOO4166 | B-lactamase regulatory protein | SubName: Full=B-lactamase regulatory protein; | chromosome | CDS | 4442094 | 225 | - | 0.666667 |
| avtA | XOO2895 | valine-pyruvate aminotransferase | SubName: Full=Valine-pyruvate aminotransferase; | chromosome | CDS | 3106412 | 1203 | - | 0.652535 |
| baeR | XOO1559 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 1591302 | 2334 | - | 0.651242 |
| baf | XOO0429 | transcriptional regulator | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome | CDS | 437057 | 729 | + | 0.713306 |
| blaI | XOO1190 | transcriptional regulator blaI family | SubName: Full=Transcriptional regulator blaI family; | chromosome | CDS | 1218561 | 420 | + | 0.580952 |
| cebR | XOO1101 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1125284 | 1221 | - | 0.657658 |
| colR | XOO3535 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 3802788 | 924 | - | 0.665584 |
| colR | XOO3763 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 4014766 | 624 | - | 0.663462 |
| colR | XOO1208 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 1233979 | 741 | - | 0.618084 |
| cspA | XOO2721 | major cold shock protein | SubName: Full=Major cold shock protein; | chromosome | CDS | 2882175 | 366 | - | 0.551913 |
| cspA | XOO1510 | major cold shock protein | SubName: Full=Major cold shock protein; | chromosome | CDS | 1543325 | 216 | + | 0.560185 |
| cysB | XOO3407 | transcriptional regulator lysR family | SubName: Full=Cystathionine beta-synthase; | chromosome | CDS | 3633921 | 984 | - | 0.666667 |
| dbpA | XOO2716 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2876181 | 1449 | + | 0.665977 |
| deaD | XOO1550 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 1578167 | 1905 | + | 0.670341 |
| dnrO | XOO2764 | repressor | SubName: Full=Repressor; | chromosome | CDS | 2926373 | 969 | - | 0.712074 |
| fis | XOO0548 | DNA-binding protein | SubName: Full=DNA-binding protein; | chromosome | CDS | 570643 | 273 | - | 0.619048 |
| fldY | XOO4566 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4863212 | 1308 | + | 0.690367 |
| flgM | XOO2566 | flagellar protein | SubName: Full=Flagellar protein; | chromosome | CDS | 2718824 | 312 | - | 0.625 |
| fliA | XOO2621 | RNA polymerase sigma factor FliA | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 2780864 | 756 | + | 0.649471 |
| gacA | XOO3077 | transcriptional regulator luxR/uhpA family | SubName: Full=Transcriptional regulator luxR/uhpA family; | chromosome | CDS | 3309787 | 720 | - | 0.598611 |
| gbpR | XOO2916 | galactose-binding protein regulator | SubName: Full=Galactose-binding protein regulator; | chromosome | CDS | 3126254 | 1038 | - | 0.643545 |
| greA | XOO2886 | transcriptional elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3098221 | 513 | - | 0.62768 |
| greB | XOO3271 | transcription elongation factor and transcript cleavage | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 3507687 | 567 | + | 0.663139 |
| hrpG | XOO1379 | HrpG | SubName: Full=HrpG; | chromosome | CDS | 1411025 | 975 | - | 0.621538 |
| hrpXct | XOO1380 | HrpX protein | SubName: Full=HrpX protein; | chromosome | CDS | 1412482 | 1527 | + | 0.639162 |
| hutC | XOO2395 | histidine utilization repressor | SubName: Full=Histidine utilization repressor; | chromosome | CDS | 2553277 | 738 | - | 0.666667 |
| icfG | XOO4263 | IcfG protein | SubName: Full=IcfG protein; | chromosome | CDS | 4537768 | 2007 | + | 0.659193 |
| kdgR | XOO0338 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 350272 | 927 | - | 0.651564 |
| kdpE | XOO3842 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 4099676 | 783 | - | 0.65645 |
| lexA | XOO3442 | LexA repressor | RecName: Full=LexA repressor 1; EC=3.4.21.88; | chromosome | CDS | 3678798 | 606 | - | 0.665016 |
| lexA | XOO2942 | LexA | RecName: Full=LexA repressor 2; EC=3.4.21.88; | chromosome | CDS | 3151451 | 678 | - | 0.638643 |
| lrp | XOO0692 | leucine responsive regulatory protein | SubName: Full=Leucine responsive regulatory protein; | chromosome | CDS | 713242 | 480 | - | 0.63125 |
| metR | XOO4336 | transcriptional regulator metE/metH family | SubName: Full=Transcriptional regulator metE/metH family; | chromosome | CDS | 4616519 | 843 | + | 0.648873 |
| mfd | XOO1472 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1515075 | 3465 | - | 0.656854 |
| nusA | XOO3219 | N utilization substance protein A | SubName: Full=N utilization substance protein A; | chromosome | CDS | 3458869 | 1512 | - | 0.638889 |
| nusB | XOO3851 | transcription termination factor NusB | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 4112017 | 471 | - | 0.649682 |
| nusG | XOO3597 | transcription antitermination factor | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 3860820 | 612 | - | 0.584967 |
| oxyR | XOO3647 | oxidative stress transcriptional regulator | SubName: Full=Oxidative stress transcriptional regulator; | chromosome | CDS | 3908948 | 942 | + | 0.633758 |
| oxyR | XOO2038 | hydrogen peroxide-inducible genes activator | SubName: Full=Hydrogen peroxide-inducible genes activator; | chromosome | CDS | 2138975 | 606 | - | 0.669967 |
| paiB | XOO2422 | transcriptional regulator protein Pai2 | chromosome | CDS | 2583336 | 303 | + | 0.643564 | |
| paiB | XOO2421 | transcriptional regulator protein Pai2 | chromosome | CDS | 2583000 | 324 | + | 0.638889 | |
| parB | XOO0504 | chromosome partitioning protein | SubName: Full=Chromosome partitioning protein; | chromosome | CDS | 521916 | 930 | - | 0.684946 |
| pcaQ | XOO3731 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3987441 | 1041 | - | 0.634006 |
| pcaR | XOO0488 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 506040 | 672 | - | 0.677083 |
| phoB | XOO3666 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 3922086 | 690 | + | 0.66087 |
| phoP | XOO0423 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 429367 | 684 | + | 0.593567 |
| prpR | XOO0891 | propionate catabolism regulatory protein | SubName: Full=Propionate catabolism regulatory protein; | chromosome | CDS | 915609 | 1776 | - | 0.653716 |
| prtI | XOO0448 | ECF sigma factor | SubName: Full=ECF sigma factor; | chromosome | CDS | 455215 | 516 | + | 0.662791 |
| prtR | XOO0449 | transmembrane regulator protein prtR | SubName: Full=Transmembrane regulator protein prtR; | chromosome | CDS | 455727 | 753 | + | 0.677291 |
| recG | XOO1151 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; | chromosome | CDS | 1173693 | 2154 | + | 0.661096 |
| regR | XOO2227 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 2341259 | 567 | - | 0.659612 |
| relA | XOO1736 | ATP:GTP 3'-pyrophosphotranferase | SubName: Full=ATP:GTP 3-pyrophosphotranferase; | chromosome | CDS | 1802201 | 2298 | + | 0.666667 |
| rfaY | XOO1613 | RNA polymerase sigma factor | SubName: Full=RNA polymerase sigma factor; | chromosome | CDS | 1659017 | 780 | - | 0.667949 |
| rfaY | XOO1548 | RNA polymerase ECF-type sigma factor | SubName: Full=RNA polymerase sigma factor; | chromosome | CDS | 1577520 | 543 | - | 0.633518 |
| rhlB | XOO4301 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4577310 | 1944 | - | 0.672325 |
| rhlE | XOO0770 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 783828 | 1455 | - | 0.683849 |
| rhlE | XOO0133 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 134954 | 1290 | - | 0.686822 |
| rho | XOO4303 | transcription termination factor Rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 4579791 | 1890 | + | 0.647619 |
| rnc | XOO1855 | ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 1957553 | 681 | + | 0.63583 |
| rnk | XOO3648 | regulator of nucleoside diphosphate kinase | SubName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 3909989 | 759 | + | 0.642951 |
| rpfG | XOO2871 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 3082872 | 1260 | - | 0.628571 |
| rpoA | XOO3558 | RNA polymerase alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 3829155 | 999 | - | 0.61962 |
| rpoB | XOO3591 | RNA polymerase beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3853543 | 4152 | - | 0.617534 |
| rpoC | XOO3590 | RNA polymerase beta' subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3849175 | 4218 | - | 0.627549 |
| rpoD | XOO0598 | RNA polymerase sigma-70 factor | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 622943 | 1890 | + | 0.609524 |
| rpoE | XOO1919 | RNA polymerase sigma factor | SubName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2022254 | 1092 | - | 0.643773 |
| rpoE | XOO3003 | RNA polymerase sigma-E factor | SubName: Full=RNA polymerase sigma-E factor; | chromosome | CDS | 3211965 | 594 | + | 0.648148 |
| rpoH | XOO4296 | RNA polymerase sigma-32 factor | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 4572954 | 990 | - | 0.606061 |
| rpoN | XOO1284 | RNA polymerase sigma-54 factor | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 1316077 | 1500 | - | 0.660667 |
| rpoN | XOO2587 | RNA polymerase sigma-54 factor | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 2738103 | 1404 | + | 0.669516 |
| rpoZ | XOO1148 | RNA polymerase omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 1170580 | 333 | + | 0.636637 |
| salR | XOO4418 | sal operon transcriptional repressor | SubName: Full=Sal operon transcriptional repressor; | chromosome | CDS | 4703748 | 1329 | - | 0.648608 |
| scoF | XOO1870 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1972238 | 228 | + | 0.596491 |
| slyA | XOO4601 | transcriptional regulator for cryptic hemolysin | SubName: Full=Transcriptional regulator for cryptic hemolysin; | chromosome | CDS | 4905669 | 636 | + | 0.677673 |
| smeR | XOO4341 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 4619834 | 744 | + | 0.700269 |
| soxR | XOO1257 | transcriptional regulator soxR family | SubName: Full=Transcriptional regulator soxR family; | chromosome | CDS | 1282972 | 447 | + | 0.659955 |
| spoT | XOO1149 | pentaphosphate guanosine-3'-pyrophosphohydrolase | SubName: Full=Pentaphosphate guanosine-3-pyrophosphohydrolase; | chromosome | CDS | 1171041 | 2172 | + | 0.635819 |
| tcsR | XOO4543 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 4841501 | 906 | - | 0.62362 |
| tctD | XOO1105 | two-component system regulatory protein | SubName: Full=Two-component system regulatory protein; | chromosome | CDS | 1130221 | 894 | + | 0.635347 |
| tex | XOO2225 | transcription-related protein | SubName: Full=Transcription-related protein; | chromosome | CDS | 2337577 | 2361 | + | 0.646336 |
| tlpC | XOO2204 | methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 2315875 | 1893 | - | 0.600634 |
| trpI | XOO3253 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3490790 | 1017 | + | 0.668633 |
| uidR | XOO3449 | transcriptional regulator uid family | SubName: Full=Transcriptional regulator uid family; | chromosome | CDS | 3683542 | 657 | + | 0.645358 |
| vacB | XOO2080 | RNase R | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 2185145 | 2529 | + | 0.650059 |
| vanR | XOO3735 | transcriptional regulator gntR family | SubName: Full=Transcriptional regulator gntR family; | chromosome | CDS | 3990118 | 210 | + | 0.657143 |
| xylR | XOO0169 | xylose repressor-like protein | SubName: Full=Xylose repressor-like protein; | chromosome | CDS | 170717 | 1185 | - | 0.66076 |
| ybhD | XOO2201 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 2314108 | 207 | + | 0.676328 |
| ybhD | XOO1112 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1136219 | 903 | + | 0.625692 |
| yoaA | XOO1741 | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 1812068 | 2028 | + | 0.662229 |
| yybA | XOO1998 | transcriptional regulator marR family | SubName: Full=Transcriptional regulator marR family; | chromosome | CDS | 2105439 | 480 | + | 0.635417 |
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