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2024-05-25 17:53:57

Gene list

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COG category: Transcription
Organism: Buchnera aphidicola str. Sg (Schizaphis graminum), Sg

Number of genes found: 18

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Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
cspE cold shock like protein CspERecName: Full=Cold shock-like protein CspE; Short=CSP-E; chromosome CDS539635 210 - 0.347619
deaD ATP-dependent RNA helicase DEADRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS409915 1806 - 0.316722
fis factor-for-inversion stimulation proteinRecName: Full=DNA-binding protein Fis; chromosome CDS437843 300 - 0.276667
greA transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS425415 480 - 0.285417
metR transcriptional activator protein MetRRecName: Full=HTH-type transcriptional regulator MetR; chromosome CDS30453 939 - 0.275825
nusA N utilization substance protein ARecName: Full=Transcription termination/antitermination protein NusA; chromosome CDS418924 1488 - 0.326613
nusB N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS509342 417 + 0.247002
nusG transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS47344 546 - 0.309524
rho transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS626807 1260 - 0.334921
rnb exoribonuclease IIRecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS292269 1941 + 0.278722
rnc ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS284091 681 - 0.317181
rnr ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; AltName: Full=VacB protein homolog; chromosome CDS596477 2181 - 0.275562
rpoA DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS547868 990 - 0.313131
rpoB DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS40773 4029 - 0.311492
rpoC DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS36463 4242 - 0.323668
rpoD RNA polymerase sigma factor RpoDRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS59048 1854 - 0.312837
rpoH RNA polymerase sigma-32 factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS25214 858 + 0.296037
yrbA hypothetical proteinRecName: Full=Uncharacterized protein BUsg_372; chromosome CDS426286 243 + 0.213992