Gene list
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COG category: Transcription
Organism: Leptospira interrogans serovar Lai str. 56601, 56601
Number of genes found: 127
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| Leptospira interrogans serovar Lai str. 56601, 56601 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LB104 | putative TetR-family transcriptional regulator | chromosome II | CDS | 93181 | 579 | - | 0.300518 |
| NA | LA1772 | hypothetical protein | chromosome I | CDS | 1768259 | 426 | + | 0.29108 |
| NA | LA1774 | hypothetical protein | chromosome I | CDS | 1769615 | 621 | - | 0.31401 |
| NA | LB130 | transcriptional regulator, AraC family | chromosome II | CDS | 123146 | 1146 | - | 0.338569 |
| NA | LB084 | ribonuclease III | chromosome II | CDS | 74293 | 744 | + | 0.352151 |
| NA | LB325 | transcriptional regulator, TetR family | chromosome II | CDS | 320145 | 729 | + | 0.351166 |
| NA | LA2066 | putative outermembrane protein | chromosome I | CDS | 2039412 | 831 | - | 0.392298 |
| NA | LA3133 | transcriptional regulator, AraC family | chromosome I | CDS | 3117584 | 1182 | + | 0.311337 |
| NA | LA3435 | ATP-dependent RNA helicase | chromosome I | CDS | 3394804 | 1623 | - | 0.378312 |
| NA | LA0825 | Transcriptional regulator, tetR family | chromosome I | CDS | 826837 | 615 | - | 0.386992 |
| NA | LA0511 | Predicted transcriptional regulator | chromosome I | CDS | 501538 | 297 | + | 0.313131 |
| NA | LA0816 | two-component response regulator transcriptional regulator protein | chromosome I | CDS | 820230 | 702 | - | 0.349003 |
| NA | LA3991 | Acetyltransferases | chromosome I | CDS | 3963054 | 456 | - | 0.324561 |
| NA | LA4049 | ATP-dependent RNA helicase | chromosome I | CDS | 4024617 | 1566 | + | 0.386973 |
| NA | LA1880 | Predicted transcriptional regulator | chromosome I | CDS | 1855009 | 426 | - | 0.359155 |
| NA | LA1226 | hypothetical protein | chromosome I | CDS | 1230032 | 345 | + | 0.321739 |
| NA | LA1363 | conserved hypothetical protein | chromosome I | CDS | 1356648 | 1197 | + | 0.381788 |
| NA | LB367 | hypothetical protein | chromosome II | CDS | 357993 | 939 | + | 0.381257 |
| NA | LA2260 | Transcriptional regulator, tetR family | chromosome I | CDS | 2240933 | 654 | + | 0.331804 |
| NA | LA3825 | Transcription regulator | chromosome I | CDS | 3786562 | 945 | - | 0.351323 |
| NA | LA1255 | conserved hypothetical protein | chromosome I | CDS | 1255068 | 564 | + | 0.391844 |
| NA | LA3845 | Transcriptional regulator, tetR family | chromosome I | CDS | 3808608 | 633 | - | 0.339652 |
| NA | LA1576 | Transcriptional regulator, marR family | chromosome I | CDS | 1570131 | 321 | + | 0.345794 |
| NA | LA2253 | Regulatory SIR2 family protein | chromosome I | CDS | 2234598 | 741 | + | 0.377868 |
| NA | LA3531 | transcriptional regulator, ArsR family | chromosome I | CDS | 3489578 | 381 | + | 0.456693 |
| NA | LA0522 | Transcriptional regulator, marR family | chromosome I | CDS | 509194 | 450 | - | 0.371111 |
| NA | LA1816 | predicted transcriptional regulator, copG family | chromosome I | CDS | 1797543 | 261 | + | 0.318008 |
| NA | LA4298 | Transcriptional regulator, marR family | chromosome I | CDS | 4274755 | 447 | - | 0.324385 |
| NA | LB164 | unknown protein confirmed by proteomics | chromosome II | CDS | 159124 | 372 | - | 0.330645 |
| NA | LA3715 | hypothetical protein | chromosome I | CDS | 3671805 | 144 | + | 0.354167 |
| NA | LA2634 | Probable chromosome partitioning protein parB | chromosome I | CDS | 2619440 | 399 | + | 0.343358 |
| NA | LA4065 | two-component response regulator | chromosome I | CDS | 4038049 | 771 | + | 0.319066 |
| NA | LA0374 | conserved hypothetical protein | chromosome I | CDS | 365935 | 2091 | - | 0.345768 |
| NA | LA2907 | transcription regulator | chromosome I | CDS | 2880382 | 954 | - | 0.357442 |
| NA | LA0443 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 442005 | 549 | + | 0.313297 |
| NA | LA2122 | putative sigma-B regulator | chromosome I | CDS | 2091947 | 981 | - | 0.331295 |
| NA | LA0316 | predicted transcriptional regulator | chromosome I | CDS | 314349 | 354 | - | 0.271186 |
| NA | LA0833 | predicted transcriptional regulator | chromosome I | CDS | 832386 | 774 | + | 0.381137 |
| NA | LB131 | putative transcriptional regulator, araC family protein | chromosome II | CDS | 124576 | 1110 | - | 0.335135 |
| NA | LA3204 | hypothetical protein | chromosome I | CDS | 3183121 | 204 | + | 0.318627 |
| NA | LA1272 | Predicted transcriptional regulator | chromosome I | CDS | 1266483 | 552 | - | 0.313406 |
| NA | LA0428 | Transcriptional regulator, tetR family | chromosome I | CDS | 426865 | 687 | - | 0.31441 |
| NA | LA1046 | hypothetical protein | chromosome I | CDS | 1054408 | 1077 | - | 0.379759 |
| NA | LA4036 | ATP-dependent RNA helicase | chromosome I | CDS | 4010598 | 2847 | - | 0.356164 |
| NA | LA4130 | probable luxR familytranscriptional regulator | chromosome I | CDS | 4097575 | 528 | + | 0.30303 |
| NA | LA4027 | cytochrome oxidase subunit IV | chromosome I | CDS | 4002303 | 585 | + | 0.362393 |
| NA | LB037 | putative sucrose/H+ symporter | chromosome II | CDS | 29824 | 459 | + | 0.368192 |
| NA | LA4281 | hypothetical protein | chromosome I | CDS | 4259012 | 408 | - | 0.232843 |
| NA | LA1807 | hypothetical protein | chromosome I | CDS | 1788885 | 270 | + | 0.266667 |
| NA | LA2101 | RNA polymerase sigma-70 factor, ECF subfamily | chromosome I | CDS | 2071513 | 555 | + | 0.389189 |
| NA | LA1282 | Transcriptional regulator, tetR family | chromosome I | CDS | 1275022 | 756 | + | 0.365079 |
| NA | LA4259 | transcriptional regulator, ArsR family | chromosome I | CDS | 4234949 | 354 | - | 0.316384 |
| NA | LA1051 | hypothetical protein | chromosome I | CDS | 1059114 | 525 | + | 0.358095 |
| NA | LA3610 | Sigma factor sigB regulation protein rsbU | chromosome I | CDS | 3556431 | 2055 | - | 0.345985 |
| NA | LB333 | two-component response regulator | chromosome II | CDS | 327874 | 732 | + | 0.372951 |
| NA | LB139 | putative regulation protein contains HAMP domain | chromosome II | CDS | 133632 | 1494 | - | 0.364792 |
| NA | LA0455 | Transcriptional regulator, tetR family | chromosome I | CDS | 454664 | 612 | - | 0.380719 |
| NA | LA2894 | Predicted transcriptional regulator | chromosome I | CDS | 2870942 | 612 | - | 0.387255 |
| NA | LA0321 | unknown protein | chromosome I | CDS | 319294 | 771 | + | 0.338521 |
| NA | LA0431 | conserved hypothetical protein | chromosome I | CDS | 431264 | 351 | + | 0.361823 |
| NA | LA0540 | conserved hypothetical protein | chromosome I | CDS | 533806 | 432 | - | 0.284722 |
| NA | LA0794 | Acetyltransferases | chromosome I | CDS | 804471 | 546 | + | 0.333333 |
| NA | LA3657 | two-component response regulator | chromosome I | CDS | 3608213 | 684 | - | 0.336257 |
| NA | LA1875 | ATP-dependent DNA helicase | chromosome I | CDS | 1848186 | 1977 | - | 0.372281 |
| NA | LA2325 | transcriptional regulator, ArsR family | chromosome I | CDS | 2303362 | 300 | + | 0.393333 |
| NA | LA1738 | Transcriptional regulator, marR family | chromosome I | CDS | 1728735 | 477 | - | 0.343816 |
| NA | LA2790 | Transcriptional regulator, tetR family | chromosome I | CDS | 2768216 | 552 | + | 0.344203 |
| NA | LA2513 | transcription-repair coupling factor | chromosome I | CDS | 2488914 | 3561 | - | 0.365066 |
| NA | LA1593 | conserved hypothetical protein | chromosome I | CDS | 1585193 | 528 | + | 0.367424 |
| NA | LA0195 | Predicted transcriptional regulator | chromosome I | CDS | 198079 | 423 | + | 0.35461 |
| NA | LA3641 | probable acetyltransferase | chromosome I | CDS | 3597081 | 744 | - | 0.322581 |
| NA | LA0900 | Transcriptional regulator, marR family | chromosome I | CDS | 893626 | 456 | + | 0.375 |
| NA | LA3710 | conserved hypothetical protein | chromosome I | CDS | 3662758 | 549 | + | 0.360656 |
| NA | LA2676 | conserved hypothetical protein | chromosome I | CDS | 2660858 | 2289 | - | 0.32547 |
| NA | LB015 | two-component response regulator | chromosome II | CDS | 12056 | 693 | + | 0.405483 |
| NA | LA1836 | hypothetical protein | chromosome I | CDS | 1810898 | 378 | + | 0.375661 |
| NA | LA3425 | hypothetical protein | chromosome I | CDS | 3387142 | 546 | - | 0.382784 |
| NA | LB105 | transcriptional regulator, ArsR family | chromosome II | CDS | 94594 | 1017 | + | 0.425762 |
| NA | LA3652 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 3605809 | 546 | - | 0.397436 |
| NA | LA0013 | transcriptional regulator, Fis family | chromosome I | CDS | 17424 | 894 | + | 0.325503 |
| NA | LA0541 | conserved hypothetical protein | chromosome I | CDS | 534342 | 369 | - | 0.330623 |
| NA | LA1197 | putative regulation protein | chromosome I | CDS | 1201594 | 1392 | + | 0.35704 |
| NA | LA2728 | conserved hypothetical protein | chromosome I | CDS | 2708865 | 420 | + | 0.369048 |
| NA | LA3514 | two-component response regulator | chromosome I | CDS | 3477080 | 1134 | - | 0.39418 |
| NA | LA2129 | DNA repair helicase | chromosome I | CDS | 2098231 | 1710 | + | 0.383041 |
| NA | LA2285 | putative outermembrane protein | chromosome I | CDS | 2262438 | 732 | + | 0.355191 |
| NA | LA0249 | Transcriptional regulators | chromosome I | CDS | 243351 | 594 | + | 0.400673 |
| NA | LA2477 | conserved hypothetical protein | chromosome I | CDS | 2454742 | 366 | - | 0.325137 |
| NA | LA3869 | two-component response regulator transcriptional regulator protein | chromosome I | CDS | 3829606 | 672 | + | 0.376488 |
| NA | LA2845 | Predicted transcriptional regulator | chromosome I | CDS | 2825787 | 297 | - | 0.350168 |
| NA | LA1437 | ROK family protein | chromosome I | CDS | 1438638 | 897 | - | 0.396878 |
| NA | LA0385 | two-component response regulator | chromosome I | CDS | 378656 | 762 | + | 0.372703 |
| NA | LA0040 | VacB protein | chromosome I | CDS | 41732 | 2247 | + | 0.327548 |
| NA | LA1091 | transcriptional regulator, ArsR family | chromosome I | CDS | 1094187 | 351 | - | 0.347578 |
| NA | LA1503 | Acetyltransferases | chromosome I | CDS | 1505194 | 513 | - | 0.354776 |
| NA | LA2011 | two-component response regulator | chromosome I | CDS | 1988799 | 723 | + | 0.367911 |
| NA | LA2951 | two-component hybrid sensor and regulator | chromosome I | CDS | 2923216 | 915 | + | 0.39235 |
| NA | LB228 | Putative AraC-type Regulator | chromosome II | CDS | 224104 | 1233 | + | 0.290349 |
| NA | LA0193 | hypothetical protein | chromosome I | CDS | 197391 | 306 | - | 0.369281 |
| NA | LB144 | RNA polymerase ECF-type sigma factor | chromosome II | CDS | 139426 | 522 | - | 0.396552 |
| chpI | LA2844 | ChpI protein | chromosome I | CDS | 2824722 | 249 | - | 0.325301 |
| fliA | LA2603 | RNA polymerase sigma-28 factor | chromosome I | CDS | 2588577 | 801 | - | 0.37578 |
| hrcA | LA3703 | Heat-inducible transcription repressor hrcA | chromosome I | CDS | 3656414 | 1029 | + | 0.371234 |
| kdpE | LA3108 | Regulatory protein KdpE | chromosome I | CDS | 3087641 | 684 | - | 0.393275 |
| lexA | LA1447 | LexA repressor | chromosome I | CDS | 1448244 | 621 | + | 0.415459 |
| nusA | LA0942 | probable transcription termination factor nusA | chromosome I | CDS | 935692 | 1383 | + | 0.41504 |
| nusB | LA0464 | N utilization substance protein B | chromosome I | CDS | 461733 | 417 | + | 0.376499 |
| nusG | LA0047 | transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin | chromosome I | CDS | 49788 | 540 | - | 0.340741 |
| parB1 | LA1838 | Probable chromosome partitioning protein parB | chromosome I | CDS | 1812149 | 882 | + | 0.302721 |
| parB2 | LA4346 | ParB-like nuclease domain | chromosome I | CDS | 4318191 | 876 | - | 0.360731 |
| parB3 | LB027 | ParB protein | chromosome II | CDS | 23222 | 708 | + | 0.362994 |
| parB4 | LB366 | ParB family protein | chromosome II | CDS | 356714 | 846 | + | 0.351064 |
| recG | LA3945 | ATP-dependent DNA helicase recG | chromosome I | CDS | 3918427 | 2175 | + | 0.38069 |
| regX | LA4102 | Sensory transduction protein regX3 | chromosome I | CDS | 4069396 | 702 | + | 0.38604 |
| relA | LA3085 | GTP pyrophosphokinase | chromosome I | CDS | 3060298 | 2043 | - | 0.383749 |
| rho | LA1021 | Transcription termination factor rho | chromosome I | CDS | 1027647 | 1449 | - | 0.428571 |
| rpoA | LA0765 | DNA-directed RNA polymerase alpha subunit | chromosome I | CDS | 774912 | 978 | + | 0.399796 |
| rpoB | LA3420 | RNA polymerase beta subunit | chromosome I | CDS | 3381091 | 3681 | - | 0.448791 |
| rpoC | LA3419 | DNA-directed RNA polymerase, beta' subunit | chromosome I | CDS | 3376873 | 4215 | - | 0.45433 |
| rpoD | LA2232 | RNA polymerase sigma-70 factor | chromosome I | CDS | 2212954 | 1758 | + | 0.386234 |
| rpoE1 | LA1205 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 1207444 | 621 | + | 0.394525 |
| rpoE2 | LA4098 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 4066711 | 579 | + | 0.352332 |
| rpoE3 | LA4122 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 4090101 | 510 | - | 0.339216 |
| rpoN | LA2404 | transcription initiation factor sigma 54 | chromosome I | CDS | 2372766 | 1422 | - | 0.35865 |
| rsbP | LA4107 | SigmaB regulation protein phosphatase 2C rsbP | chromosome I | CDS | 4073986 | 2379 | + | 0.332072 |
| sigW | LA0165 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 174390 | 525 | + | 0.321905 |
| sigX | LA0876 | Probable RNA polymerase ECF-type sigma factor | chromosome I | CDS | 875499 | 543 | + | 0.338858 |
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