TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-18 16:18:44

Gene list

Applied filters:

COG category: Transcription
Organism: Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586

Number of genes found: 102

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
FN0019 Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS656689 2946 + 0.254922
FN0055 Ribosomal-protein-alanine acetyltransferaseSubName: Full=Ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; chromosome CDS692298 507 + 0.266272
FN0065 Transcription accessory protein (S1 RNA binding domain)SubName: Full=Transcription accessory protein (S1 RNA binding domain); chromosome CDS700073 2172 + 0.285451
FN0113 Heat-inducible transcription repressor hrcARecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS746697 1056 + 0.287879
FN0129 Urease accessory protein ureGSubName: Full=Urease accessory protein ureG; chromosome CDS757735 696 + 0.304598
FN0152 Ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS780168 705 + 0.300709
FN0153 Oxygen-independent coproporphyrinogen III oxidaseSubName: Full=Oxygen-independent coproporphyrinogen III oxidase; EC=1.-.-.-; chromosome CDS780859 1047 + 0.26361
FN0191 helix-turn-helix DNA-binding proteinSubName: Full=Helix-turn-helix DNA-binding protein; chromosome CDS815892 1434 + 0.269177
FN0196 Transcriptional regulator, FUR familySubName: Full=Transcriptional regulator, FUR family; chromosome CDS822457 351 + 0.2849
FN0198 Transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS823901 1983 + 0.203227
FN0212 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS837673 543 - 0.259668
FN0219 Autolysin response regulatorSubName: Full=Autolysin response regulator; chromosome CDS842684 723 - 0.246196
FN0228 Transcriptional regulator, DeoR familySubName: Full=Transcriptional regulator, DeoR family; chromosome CDS855497 777 - 0.2574
FN0251 Hypothetical membrane-spanning ProteinSubName: Full=Hypothetical membrane-spanning Protein; SubName: Full=Hypothetical membrane-spanning protein; chromosome CDS873936 381 + 0.301837
FN0260 Transcriptional repressor smtBSubName: Full=Transcriptional repressor smtB; chromosome CDS886351 378 - 0.280423
FN0315 Transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS952074 846 + 0.286052
FN0333 Glycerol uptake operon antiterminator regulatory proteinSubName: Full=Glycerol uptake operon antiterminator regulatory protein; chromosome CDS967337 561 - 0.244207
FN0414 ATP-dependent helicase HEPASubName: Full=ATP-dependent helicase HEPA; chromosome CDS1050314 3045 + 0.248933
FN0448 DNA-repair proteinSubName: Full=DNA-repair protein; chromosome CDS1091230 1578 + 0.262991
FN0473 Regulatory protein betISubName: Full=Regulatory protein betI; chromosome CDS1118432 570 + 0.24386
FN0476 Transcription termination factor rhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS1123590 1242 + 0.308374
FN0479 RNA polymerase sigma-E factorSubName: Full=RNA polymerase sigma-E factor; chromosome CDS1127143 450 + 0.233333
FN0493 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1137713 930 - 0.226882
FN0503 Transcriptional regulatory protein, LYSR familySubName: Full=Transcriptional regulatory protein, LYSR family; chromosome CDS1152754 909 - 0.268427
FN0528 Cold shock proteinSubName: Full=Cold shock protein; chromosome CDS1184591 216 + 0.300926
FN0545 Lipopolysaccharide core biosynthesis protein rfaYSubName: Full=Lipopolysaccharide core biosynthesis protein rfaY; chromosome CDS1198181 597 + 0.227806
FN0555 Transcriptional regulator, MerR familySubName: Full=Transcriptional regulator, MerR family; chromosome CDS1207793 600 + 0.263333
FN0585 Two-component response regulator czcRSubName: Full=Two-component response regulator czcR; chromosome CDS1239928 675 + 0.262222
FN0589 Transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS1242570 324 + 0.268519
FN0603 Transcriptional regulatory protein, LYSR familySubName: Full=Transcriptional regulatory protein, LYSR family; chromosome CDS1257591 945 - 0.233862
FN0608 Exoribonuclease IIRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS1262282 2103 + 0.270566
FN0681 Transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS1336255 678 + 0.259587
FN0682 Fibronectin-binding protein-like protein ASubName: Full=Fibronectin-binding protein-like protein A; chromosome CDS1336934 1626 + 0.231857
FN0690 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1345327 465 + 0.251613
FN0743 ATP-dependent helicase, DinG familySubName: Full=ATP-dependent helicase, DinG family; chromosome CDS1400990 2226 + 0.255166
FN0757 Hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS1415746 546 - 0.238095
FN0761 Bvg accessory factorRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS1419009 771 + 0.259403
FN0762 unknownSubName: Full=Uncharacterized protein; chromosome CDS1419834 357 - 0.238095
FN0790 Xylose repressorSubName: Full=Xylose repressor; chromosome CDS1445384 1164 - 0.229381
FN0813 Transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1471594 1119 - 0.235031
FN0830 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1490394 1569 + 0.265137
FN0878 Transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS1539177 708 - 0.257062
FN0893 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1553964 423 + 0.248227
FN0943 Sensory Transduction Protein KinaseSubName: Full=Sensory Transduction Protein Kinase; EC=2.7.3.-; chromosome CDS1596940 615 + 0.252033
FN1004 Transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1659802 567 + 0.26455
FN1006 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1661088 399 - 0.22807
FN1034 Transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1687788 618 + 0.216828
FN1057 Diamine acetyltransferaseSubName: Full=Diamine acetyltransferase; EC=2.3.1.57; chromosome CDS1704466 441 + 0.21542
FN1091 Sigma factor sigB regulation protein rsbUSubName: Full=Sigma factor sigB regulation protein rsbU; chromosome CDS1736055 1344 + 0.256696
FN1093 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1738355 429 + 0.244755
FN1107 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1752101 327 + 0.2263
FN1126 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1769910 468 - 0.192308
FN1160 SWF/SNF family helicaseSubName: Full=SWF/SNF family helicase; chromosome CDS1815976 3270 + 0.229664
FN1164 GlucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS1821894 948 + 0.300633
FN1185 SIR2 family proteinRecName: Full=NAD-dependent protein deacetylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1847653 759 - 0.270092
FN1216 RRF2 family proteinSubName: Full=RRF2 family protein; chromosome CDS1876261 432 - 0.287037
FN1232 Transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS1889090 342 - 0.248538
FN1240 Lipopolysaccharide core biosynthesis protein rfaYSubName: Full=Lipopolysaccharide core biosynthesis protein rfaY; chromosome CDS1897147 723 - 0.22545
FN1249 Transcriptional regulator, DeoR familySubName: Full=Transcriptional regulator, DeoR family; chromosome CDS1905387 945 - 0.273016
FN1261 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1917260 702 - 0.257835
FN1278 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1936872 393 - 0.244275
FN1283 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1941737 1029 - 0.289602
FN1295 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1953248 408 - 0.227941
FN1317 RNA polymerase sigma factorSubName: Full=RNA polymerase sigma factor; chromosome CDS1970363 813 - 0.266913
FN1318 RNA polymerase sigma factor rpoDRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS1971191 996 - 0.310241
FN1384 IAA acetyltransferaseSubName: Full=IAA acetyltransferase; EC=2.3.1.-; chromosome CDS2037978 369 - 0.276423
FN1386 SWF/SNF family helicaseSubName: Full=SWF/SNF family helicase; chromosome CDS2040278 2679 - 0.238895
FN1416 Transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; EC=2.6.1.-; chromosome CDS2077033 1371 + 0.224654
FN1418 Transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; EC=2.6.1.-; chromosome CDS2079163 1428 - 0.254902
FN1439 Transcriptional regulator, DeoR familySubName: Full=Transcriptional regulator, DeoR family; chromosome CDS2106568 738 + 0.260163
FN1462 Transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; EC=2.6.1.-; chromosome CDS2143626 1410 - 0.244681
FN1471 LACI-family transcription regulatorSubName: Full=LACI-family transcription regulator; chromosome CDS2153144 1002 + 0.247505
FN1474 N-acetylmannosamine kinaseSubName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; chromosome CDS2157028 876 + 0.275114
FN1482 Guanosine-3',5'-bis(Diphosphate)3'-pyrophosphohy drolaseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; chromosome CDS2163905 2178 - 0.284206
FN1490 putative regulatory proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS2171924 450 - 0.28
FN1518 RNA polymerase sigma-H factorSubName: Full=RNA polymerase sigma-H factor; chromosome CDS23553 615 - 0.261789
FN1587 AcetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS98981 414 + 0.198068
FN1589 LexA repressorSubName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS99932 660 + 0.262121
FN1616 N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS126066 462 - 0.266234
FN1660 ATP-dependent DNA helicase recGSubName: Full=ATP-dependent DNA helicase recG; EC=3.6.1.-; chromosome CDS155929 2070 - 0.27971
FN1662 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS158982 1455 - 0.246735
FN1743 Multidrug-efflux transporter 2 regulatorSubName: Full=Multidrug-efflux transporter 2 regulator; chromosome CDS241122 807 - 0.237918
FN1803 Transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS284354 654 + 0.229358
FN1814 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS294782 579 - 0.265976
FN1823 Transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS311860 471 + 0.239915
FN1899 Hypothetical lipoproteinSubName: Full=Hypothetical lipoprotein; chromosome CDS386804 1251 - 0.331735
FN1904 Transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS393247 447 + 0.248322
FN1928 Transcriptional regulator, MerR familySubName: Full=Transcriptional regulator, MerR family; chromosome CDS428054 555 - 0.286486
FN1974 DNA/RNA helicase (DEAD/DEAH BOX family)SubName: Full=DNA/RNA helicase (DEAD/DEAH BOX family); chromosome CDS472788 2829 - 0.247084
FN1975 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS475739 1587 + 0.276623
FN1987 Transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS490108 651 - 0.210445
FN1997 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS499898 321 + 0.221184
FN2010 Transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS509910 483 - 0.26501
FN2022 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS525162 1074 - 0.295158
FN2035 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS538912 3960 - 0.309596
FN2036 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS542907 3555 - 0.318987
FN2041 Transcription antitermination protein nusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS549168 582 - 0.310997
FN2050 Hypothetical membrane-spanning proteinSubName: Full=Hypothetical membrane-spanning Protein; SubName: Full=Hypothetical membrane-spanning protein; chromosome CDS559680 381 - 0.304462
FN2061 Hypothetical membrane-spanning proteinSubName: Full=Hypothetical membrane-spanning Protein; SubName: Full=Hypothetical membrane-spanning protein; chromosome CDS573756 381 - 0.304462
FN2065 Transcriptional repressorSubName: Full=Transcriptional repressor; chromosome CDS575990 468 + 0.262821
FN2076 MunI regulatory proteinSubName: Full=MunI regulatory protein; chromosome CDS587626 231 - 0.272727
FN2089 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS601100 540 - 0.246296