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2024-05-07 15:48:59

Gene list

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COG category: Transcription
Organism: Xylella fastidiosa Temecula1, Temecula1

Number of genes found: 94

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xylella fastidiosa Temecula1, Temecula1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PD1726 phage-related proteinchromosome CDS2013171 1512 + 0.552249
NA PD1380 cold shock proteinchromosome CDS1603976 204 - 0.465686
NA PD1177 conserved hypothetical proteinchromosome CDS1379817 306 + 0.464052
NA PD0694 conserved hypothetical proteinchromosome CDS850435 462 - 0.588745
NA PD1149 transcriptional regulatorchromosome CDS1347095 1005 - 0.499502
NA PD0643 conserved hypothetical proteinchromosome CDS790372 228 + 0.517544
NA PD0906 phage-related proteinchromosome CDS1117952 435 - 0.411494
NA PD2046 conserved hypothetical proteinchromosome CDS2409891 966 - 0.534162
NA PD1730 phage-related proteinchromosome CDS2017510 1419 + 0.566596
NA PD1939 N-acetyltransferasechromosome CDS2279145 471 - 0.573248
NA PD1470 conserved hypothetical proteinchromosome CDS1713534 744 + 0.514785
NA PD2104 conserved hypothetical proteinchromosome CDS2491945 309 - 0.527508
NA PD1002 phage-related proteinchromosome CDS1204485 633 - 0.540284
NA PD1771 conserved hypothetical proteinchromosome CDS2063510 426 - 0.50939
NA PD1528 conserved hypothetical proteinchromosome CDS1773249 705 + 0.540426
NA PD0813 transcriptional regulator PbsX familychromosome CDS1000347 381 - 0.540682
NA PD1124 phage-related proteinchromosome CDS1317122 759 + 0.516469
NA PD1748 conserved hypothetical proteinchromosome CDS2035131 534 - 0.533708
NA PD1116 phage-related proteinchromosome CDS1312844 567 - 0.560847
NA PD1005 phage-related repressor proteinchromosome CDS1206621 690 + 0.442029
NA PD0307 toxinchromosome CDS386446 483 - 0.565217
NA PD0032 conserved hypothetical proteinchromosome CDS39197 543 + 0.535912
NA PD0707 transcriptional regulator MarR/EmrR familychromosome CDS866104 480 - 0.466667
NA PD1133 phage-related proteinchromosome CDS1324106 1608 + 0.555348
NA PD1016 phage-related proteinchromosome CDS1215224 885 + 0.542373
NA PD0382 phage-related proteinchromosome CDS464933 1419 + 0.568006
NA PD1159 transcriptional regulatorchromosome CDS1360302 930 + 0.56129
NA PD1137 phage-related proteinchromosome CDS1328703 1419 + 0.561663
NA PD1194 phage-related proteinchromosome CDS1389925 1419 + 0.568006
NA PD1315 chromosome partitioning proteinchromosome CDS1542769 933 - 0.543408
NA PD1321 phage-related proteinchromosome CDS1550281 168 - 0.511905
NA PD2093 conserved hypothetical proteinchromosome CDS2481568 513 + 0.362573
NA PD1909 transcription regulator proteinchromosome CDS2239693 363 - 0.53168
NA PD0989 phage-related proteinchromosome CDS1194458 243 - 0.584362
NA PD0371 phage-related proteinchromosome CDS458554 402 + 0.529851
NA PD1001 phage-related proteinchromosome CDS1203700 789 - 0.555133
NA PD0225 conserved hypothetical proteinchromosome CDS288771 660 + 0.557576
NA PD0954 conserved hypothetical proteinchromosome CDS1157184 333 - 0.51952
NA PD0199 conserved hypothetical proteinchromosome CDS251341 429 - 0.517483
NA PD1087 conserved hypothetical proteinchromosome CDS1288023 333 - 0.537538
NA PD0993 conserved hypothetical proteinchromosome CDS1197942 360 - 0.516667
NA PD0835 conserved hypothetical proteinchromosome CDS1033883 2523 + 0.571145
NA PD0389 conserved hypothetical proteinchromosome CDS472994 429 - 0.456876
NA PD1993 temperature acclimation protein Bchromosome CDS2344635 222 - 0.454955
NA PD1213 KDO kinasechromosome CDS1414311 780 - 0.532051
NA PD0871 Trp operon transcriptional repressorchromosome CDS1083467 279 + 0.34767
NA PD0682 transcriptional regulator LacI familychromosome CDS836237 1077 + 0.545033
act PD0421 transcriptional regulatorchromosome CDS520298 906 - 0.558499
actR PD1958 two-component system, regulatory proteinchromosome CDS2300547 579 + 0.571675
agmR PD0268 transcriptional regulator LuxR/UhpA familychromosome CDS340538 633 + 0.516588
algH PD1276 transcriptional regulatorchromosome CDS1487577 567 - 0.552028
algR PD1153 two-component system, regulatory proteinchromosome CDS1350700 759 - 0.498024
algU PD1284 RNA polymerase sigma-H factorchromosome CDS1502037 621 + 0.507246
attO PD0520 transcriptional regulator AraC familychromosome CDS636886 846 + 0.553191
baf PD1072 transcriptional regulatorchromosome CDS1274398 729 + 0.510288
colR PD1919 two-component system, regulatory proteinchromosome CDS2251333 678 + 0.536873
colR PD1367 two-component system, regulatory proteinchromosome CDS1589173 714 - 0.529412
cysB PD1839 transcriptional regulator LysR familychromosome CDS2154703 984 - 0.557927
deaD PD0205 ATP-dependent RNA helicasechromosome CDS261295 1848 - 0.570887
fis PD0811 DNA-binding proteinchromosome CDS999260 273 - 0.512821
gacA PD1984 transcriptional regulatorchromosome CDS2334631 663 - 0.463047
greA PD0400 transcriptional elongation factorchromosome CDS489158 477 + 0.522013
hlyU PD1891 transcriptional regulator ArsR familychromosome CDS2219431 345 + 0.536232
hrcA PD1372 heat-inducible transcriptional repressorchromosome CDS1595494 1050 - 0.542857
korB PD0041 transcriptional repressorchromosome CDS54701 1074 - 0.439479
lexA PD0092 LexA repressorchromosome CDS117015 636 + 0.525157
mfd PD0033 transcription-repair coupling factorchromosome CDS39807 3588 + 0.544314
nusA PD0193 N utilization substance protein Achromosome CDS242734 1512 + 0.509921
nusB PD1743 transcription termination factorchromosome CDS2030328 474 - 0.525316
nusG PD2006 transcription antitermination factorchromosome CDS2367393 558 - 0.460573
oxyR PD0747 oxidative stress transcriptional regulatorchromosome CDS921694 936 + 0.522436
phoB PD1970 two-component system, regulatory proteinchromosome CDS2317096 696 - 0.530172
popP PD1679 two-component system, regulatory proteinchromosome CDS1948635 684 - 0.489766
prsX PD0175 transcriptional regulator MarR familychromosome CDS222185 507 + 0.433925
recG PD1705 ATP-dependent DNA helicasechromosome CDS1987389 2157 - 0.562819
relA PD0563 ATP:GTP 3'-pyrophosphotranferasechromosome CDS692427 2157 + 0.538711
rhlB PD2053 ATP-dependent RNA helicasechromosome CDS2419308 1632 - 0.515319
rhlE PD0157 ATP-dependent RNA helicasechromosome CDS200530 1341 + 0.515287
rho PD2055 transcription termination factor Rhochromosome CDS2422113 1281 + 0.494145
rnc PD1290 ribonuclease IIIchromosome CDS1508311 684 + 0.55117
rpfG PD0405 response regulatorchromosome CDS496004 1155 + 0.522944
rpoA PD0461 RNA polymerase, alpha subunitchromosome CDS549106 999 + 0.439439
rpoB PD2001 RNA polymerase beta subunitchromosome CDS2360203 4167 - 0.465803
rpoC PD2000 RNA polymerase beta' subunitchromosome CDS2355881 4224 - 0.464489
rpoD PD0593 RNA polymerase sigma-70 factorchromosome CDS724988 1872 + 0.47062
rpoH PD2048 RNA polymerase sigma-32 factorchromosome CDS2414998 882 - 0.471655
rpoN PD0637 RNA polymerase sigma-54 factorchromosome CDS785517 1389 - 0.532757
rpoZ PD0719 RNA polymerase omega subunitchromosome CDS883270 300 - 0.506667
spoT PD1707 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1990140 2208 - 0.513587
tctD PD0265 two-component system, regulatory proteinchromosome CDS336890 696 + 0.531609
tex PD1223 transcription-related proteinchromosome CDS1422685 2319 + 0.531263
vacB PD0820 truncated ribonuclease Rchromosome CDS1009582 2247 + 0.564308
yoaA PD1798 ATP-dependent helicasechromosome CDS2099787 2022 + 0.586548
yybA PD0595 transcriptional regulator MarR familychromosome CDS730012 447 + 0.496644