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# Chlamydophila pneumoniae TW-183, TW-183

>CpB0784 sigma factor 70
MFMNTQNSQATEVSSEEESQKKLEELVALAKEQGFITYEEINEILPMSFD
TPEQIDQVLIFLTGMDIQVLNQIDVERQKEKKKEAKELEGLARRTEGTPD
DPVRMYLKEMGTVPLLTREEEVEISKRIEKAQVQIERIILRFRYSAKEAI
SIAHYLISGKERFDKIISEKEVEDKTHFLKLLPKLITLLKEEDTYLENLL
LSLKQPDLSKQEAAKLNDSLEKCRIRTQAYLRCFHCRHNVTEDFGEVVFK
AYDSFLHLEQQINDLKVRAERNKFAAAKLAAAKRKLYKREVAAGRTLEEF
KKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEG
NMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIE
TINKVLRGAKKLMMETGKEPTPEELAEELGLTPDRVREIYKIAQHPISLQ
AEVGEGSESSFGDFLEDTAVESPAEATGYSMLKDKMKEVLKTLTDRERFV
LIHRFGLLDGKPKTLEEVGSAFNVTRERIRQIEAKALRKMRHPIRSKQLR
AFLDLLEEEKTGTSKVKSLKSK
>CpB1026 hypothetical protein
MQMLYALDMAPSAEDSLVPLLMSQTAVSQKHVLVALNQTKSILEKSQELD
LIIGNALKNKSFDSLDLVEKNVLRLTLFEHFYSPPINKAILIAEAIRLVK
KFSYSEACPFIQAILNDIFTDSSLNENSLSI
>CpB0525 proteins of ribonuclease
MLKKPKRKPGRRTYGKSLKIFIPGTLFVHARKGFGFVSPDNPEEYPFDIF
VPARDLRGALDGDHVIVSVLPYPRDGQKLKGTISEVLARGKTTLVGTITS
LVSPTSALAYTSMSGSQSLIPVELLPGRTYKIGDRILLSTPPWVDKPQEG
ASPALQMLEFIGHITNAKADFQAIQAEYNLAEEFPPEVIEEASLFSQKHI
TQVLHSRKDLRDLLCFTIDSSTARDFDDAISLTYDHNNNYILGVHIADVS
HYVTPHSHLDKEAAKRCNSTYFPGKVIPMLPSALSDNLCSLKPNVDRLAV
SVFMTFTKSGHLSDYQIFRSVIRSKYRMTYDEVDNIIEKKHSHPLSKILN
EMATLSKKFSDIREERGCIRFVLPSVTMSLDNLQEPVALIENHQTFSHKL
IEEFMLKANEVVAYHISHQGVSLPFRSHEPPNDENLLAFQELAKNMGFDI
TFTPTQEPDYQYLLQTTSAGHPLEQVLHSQFVRSMKTASYSTENKGHYGL
KLDYYTHFTSPIRRYIDLIVHRLLFNPLSIDQTHLEIIVRACSTKERVSA
KAENSFENLKKTRFINKFLQEQPKTTYHAYIITANHEGLSFVVTEFCHEG
FIAAAELPKEYSLKKNALPESIPDKMKPGASIKVTIDSVNLLTQKIVWSI
ATTTEDKPKKIKKTPSKKKGTKKRAS
>CpB0634 transcription termination factor rho
MKEERSSEILPRVKETKKHAYVSMQEKSCVGECAVVASESEEAESVTVTK
IAKLQRMGIEELNILARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIG
EGVLEVLPDGFGFLRSPTYNYLPSAEDIYVSPAQIRRFDLKKGDTIIGTI
RSPKEKEKYFALLKVDKINGSTPDKAKERVLFENLTPLYPNQRIVMEMGK
DHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHAIAVNNPDIVL
IVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAA
RNIEGGGSLTILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRT
YPAIDLIKSGTRKEELLYHPSELERVYLFRQAIADLTTIDAMHLLLGRLK
KTNSNAEFLLSLKE
>CpB0730 serine/threonine-protein kinase
MDCRGGIPLPEPQVIGGYHVKKILSKKLRSRVVHGLHPETRHSTVIKVFS
PSPSFTSRSVYNFLKEAQSLHQITHPNIVKFHRYGKWQDCLYIAMEYIEG
ISLREYILAQFISLPQAIDIIFDIAQALEHLHSRNILHKDIKPENILITP
QGKIKLIDFGLADWDTEIQRAHPSVIGTPYYMSPEQRQGESHSPASDIYA
LGLLAYELILGHLSLGRVFLSLVPERISKILAKALQPSPNNRYSSTREFI
QDIHHYRMSGDMQEDLRIKDHTVALYEQLQTQRFWLAPETLRFPDFISGV
LYHQGYPLYPHAYDTLLEGDVFNLWLGYSPISNATIALSVVKSLVCQQDL
QRPLLDRVCEINECLIRMKIPIDEMGISILCLEISKENKELSWVACGKTV
FWIKRQGRVVQDFESFSPGLGKITSLQIRETKVAWEIGDEAVVCTLELEE
SVASLKTLSLAELQDRRQKAIFCPIESIHGGIQSRQHGSNSPSTLISLKR
IR
>CpB0326 transcription termination-antitermination factor
MNKNLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNIN
SRTGDIEVFCEKEIVEICQNPSKEIPLDKAREYDPDCQIGQYMDVPFVSD
NFGRIAAHAARQIIGQKLRHAERDVIYEEYRHRVNETLSGVVKRFAKGSN
LIIDLGKVEAILPTRFYPKTEKHKIGDKIYALLYEVQESENGGAEVILSR
SHAEFVKQLFIQEVPELEEGSVEIVKIAREAGYRTKLAVRSSDPKTDPVG
AFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTELLQNLLYPIEIQKIAIL
EDDKVIAIVVNDADYATVIGKRGINARLISHILDYELEVQRMSEYNKLLE
IQRLQLAEFDSPHLDQPLEMEGISKLVIQNLEHAGYDTIRRVLLASANDL
ASVPGISLELAYKILEQVSKYGESKVDEKPEIED
>CpB0196 arginine repressor protein
MKKKVTIDEALKEILRLEGAATQEELCAKLLAQGFATTQSSVSRWLRKIQ
AVKVAGERGARYSLPSSTEKTTTRHLVLSIRHNASLIVIRTVPGSASWIA
ALLDQGLKDEILGTLAGDDTIFVTPIDEGRLPLLMVSIANLLQVFLD
>CpB0081 DNA-directed RNA polymerase beta chain
MLKCPERVSVKKKEDIPDLPNLIEIQIKSYKQFLQIGKLAEERENIGLEE
VFREIFPIKSYNEATVLEYLSYNLGVPKYSPEECIRRGITYSVTLKVRFR
LTDETGIKEEEVYMGTIPLMTDKGTFIINGAERVVVSQVHRSPGINFEQE
KHSKGNILFSFRIIPYRGSWLEAIFDINDLIYIHIDRKKRRRKILAITFI
RALGYSSDADIIEEFFTIGESSLRSEKDFALLVGRILADNIIDEASSLVY
GKAGEKLSTAMLKRMLDAGIASVKIAVDADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFS
IDDEALSQVTLRKEDVIGALKYLIRLKMGDEKACVDDIDHLANRRVRSVG
ELIQNQCRSGLARMEKIVRERMNLFDFSSDTLTPGKVVSAKGLASVLKDF
FGRSQLSQFMDQTNPVAELTHKRRLSALGPGGLNRERAGFEVRDVHASHY
GRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVRDGIVTDEIEY
MTADVEEECVIAQASASLDEYNMFTEPVCWVRYAGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPVVGTGLE
CRAAKDSGAIVVAEEDGVVDFVDGYKVVVAAKHNPTIKRTYHLKKFLRSN
SGTCINQQPLCAVGDVITKGDVIADGPATDRGELALGKNVLVAFMPWYGY
NFEDAIIISEKLIREDAYTSIYIEEFELTARDTKLGKEEITRDIPNVSDE
VLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEERLLRAIFGEKA
ADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQVATLKTEYREKLGALLLNEKAPAAIIHRRTAEIVVHEGLLFDQETI
ERIEQEDLVDLLMPNCEMYEVLKGLLSDYETALQRLEINYKTEVEHIREG
DADLDHGVIRQVKVYVASKRKLQVGDKMAGRHGNKGVVSKIVPEADMPYL
SNGETVQMILNPLGVPSRMNLGQVLETHLGYAAKTAGIYVKTPVFEGFPE
QRIWDMMIEQGLPEDGKSFLYDGKTGERFDNKVVIGYIYMLKLSHLIADK
IHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVSGRTRIYESIVKGENLLRSGTPESFNVLIKEMQGLGLDVRPMVV
DA
>CpB0354 putative integral membrane protein
MLIMLSCVFSDTIFLSSFLAVTLICMTTALWGTILLISKQPLLSESLSHA
SYPGLLVGALMAQYVFSLQASIFWIVLFGCAASVFGYGIIVFLGKVCKLH
KDSALCFVLVVFFAIGVILASYVKESSPTLYNRINAYLYGQAATLGFLEA
TLAAIVFCASLFALWWWYRQIVVTTFDKDFAVTCGLKTVLYEALSLIFIS
LVIVSGVRSVGIVLISAMFVAPSLGARQLSDRLSTILILSAFFGGISGAL
GSYISVAFTCRAIIGQQAVPVTLPTGPLVVICAGLLAGLCLLFSPKSGWV
IRFVRRKHFSFSKDQEHLLKVFWHISHNRLENISVRDFVCSYKYQEYFGP
KPFPRWRVQILEWRGYVKKEQDYYRLTKKGRSEALRLVRAHRLWESYLVN
SLDFSKESVHELAEEIEHVLTEELDHTLTEILNDPCYDPHRQIIPNKKKE
V
>CpB0799 sigma factor 54
MFQQKQKLSLKYLPSLRMQQGLQMLQSPLTELSSYVVQEIIDNPFFDLSS
LEEEEWSPCYRPTNSTFSYLNQTPGPQESLYTRLLPQIEEAFSTAEERFI
AHQIAGNLSDEGLFLRNPEDFAQELELPLEKIHKVWDTIQNLSPEGIASP
SLQSYWMKLLRNSSHQQAYSIVRDCYPLMTNCEFAPIMKKFSLSLSELRN
ILKKALGSIPWCPAAACTVKPMVSTPLPDIYLFYSSGSWKIEVSTRGLPS
IKLNKETFHFYEHLPKEEQKNLSQQILSAKWLIKNLRKREQTLLQVMETL
LPKQEDFLLGKIPAPYPLGIKDLAEDLSFHESTIFRAIENKAVAAPIGIF
PLKHLFPRGIHQDSSHSKENVLQWIRQWIATEQTPLSDSVISDRITAKGI
PCARRTVAKYRAQLKILPANKRKKLFYIRSSNSHFRDRQF
>CpB0864 SNF protein
MVLEALAIFRQDAMQHLLKHRKEIVVDFCEDSYTIRIPDEEAPEGYWLST
LKLQDIDRLTFASCSCPDGECCLHLMTAYFAVYDALGLHPLHDKFRHSFW
YAVFSHFFLDSIPLQAQGEMVYTLESPHITLTIECLSEEVFQDWLRTIHA
SEEPTVFTNKTFLKSALYRTAKKFFFLNEEGAELTIGENSQGFPSHFSLQ
WQGLVFKAEILDFPTLEDIFPKLELAHTSLENVSHDISITNVTVCAEEAK
VNFTLSPVIHKKDRENHPKTRIGSVEYVAKTHEMITGPKAIALPIYAIPL
LADKFKDQLLSLLCYDSLEYRLRYDIRLLRDASFSFSAYLVTPGDLDNGS
LIYPNYCYSPTKGLMQVVGMLSPKQAFIVKSEQVEDFLNERGHLIQEPGF
QTFINERPEGHLTYNVTEQGVLLFHYDVGDPSSTEIRFGTWTYYTNQGFF
LEKKNDLPIQDGLIVEPQDIPAFIVKNDAALRRLPNFFSSPPNLKDLLIE
VHRQSRGKGLDLKPILVGLGESRCWLFGVFLYREDIGFSLIPTPLQGLCF
LPRVIPPENVPQFLTQYAQHERILFPNPQTRPPESYELVIQSIHRPHPAS
PLHLQLELKTNLGSVPIGIALQGLKSKHTFLFTQAGFLDLKQNLFQFLKQ
FLSTQKCVIAENTVIANITDVFKLDALAPLSVTDDTIANPEDLQFFSQLK
AACLPPIPQNLFSSDHQLRPYQNSGLLWMWFLYNHRLSGLLCDEMGLGKT
HQATALLDIVFQSSQPSARPKFLIVCPTSVLPHWEHILSNHLPGVSIFSF
HGPNKPSELPPADILLTSYGTLRQNYDKFYKIAFTIVVFDEIHMAKNKSS
QIHKILCRIDAQMKLGLTGTPIENNLLEFKGLLDIILPNYLPSDALFKKL
FTKRCSSEELEEIIPSQDLLLKLTRPFILRRTKKLVLPELPDKVESIIAC
SLSPDQEKLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDH
PAVFFKDPDQYKNYESGKWNAFVKLLKESLNAGYKVVVFSQYIHMIRIIT
LYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQVFVGSLLAAGTGINLT
AGNVVIMYDRWWNPAKENQALDRVHRIGQKNTVFIYKLITEDTLEERIHY
LIEKKIRLLDKVIASQDSNILHMLNREDLLTILSYKDEHGTSDSEESPVD
APVEDDTGVLPPEDS
>CpB0140 hypothetical protein
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLG
FEISDDIFTFEKVSNHNIRFCMGGPLQANQMMLLHSCSEIPEQTLEICPS
VYLGGDLPFLQEIASSESGPEINLCFGYSGWQAGQLEKEFLSNDWFLAPG
NKDYVFYSEPEDLWALVLKDLGGKYASLSTVPDNLLLN
>CpB0554 hypothetical protein
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQV
LKRDGRYENFQESKLIHGLNAASSHTRIGQDQVHAIASNVKSELLGKQNR
EISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDM
EK
>CpB0652 DNA-directed RNA polymerase alpha chain
MSDNAHNLLYDKFELPEAVKMLPVEGLPIDKHARFIAEPLERGMGHTLGN
ALRRALLIGLEAPAIISFAMTGVLHEYMAIEGVIEDVTNIILNLKGALLK
KYPMQDSSLGRTTQVLKASISIDASDLAAANGQKEVTLQDLLQEGDFEAV
NPDQVIFTVTQPIQLEVVLRIAFGRGYTPSERIVLEDKGVYEIVLDAAFS
PVTLVNYFVEDTRVGQDTDFDRLVLIVETDGRVTPKEALAFSTQILTKHF
SIFENMDEKKIVFEEAISIEKENKDDILHKLILGINEIELSVRSTNCLSN
ANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLTQFG
VGLDNVKEKMKWYAEKIRAKNTKG
>CpB0878 swf/snf helicase
MLNFRKLRRDFSANILQDGKKLFEQGAVIDAKILSMNGETVCISAQVRGL
YDNIYECEIEVDRSESDTVDSNCDCSYNYDCQHIVALLFYLEQYFNEMVV
AYARSADLETDHEINEEVKKELKETFVAAATKEEERKDREHQKEILREYV
HAANALSANPFFLPLEYLEKDSAELAVLFVSVNEDTFAPANQPIEFQLVL
RLPCRSKPFYISNIRTFLEGVLYQEPIVLNGRRFFFTMQSFNASDRKLID
LLIRYVRYPNHTTEEKLLKSAYLMPPALGVILAKMFEHQLADRGGGSLGE
KESFSGLFCGNLEEPLCWSLTPAKMKFNLDFFDMPYKALLMTPVILVDDD
EVQPEQTMLLESDAPGIIHHFVYHRFSPQIKRAHLRSFSRLRDIAIPEAL
FGSFRENALPVFQEYAEIANVHLLNSFVTLPYVDEVRAICDMSYLDGELE
AKLHFLYGSLRVPAASLALQYQDVRAFISDEGILARNLVEERKMLEEVFS
GFIYDERDGAFRVKSEKKIVEFMTETIPANQHRITFNCPENLSGQFIYDE
TIFELSFREGSDINYYEADLKVHGLLKGVPLDLLWDCISAKKRFLELPKA
GQQSKGTRRGKVNSGKLPCILVLDLEKIAPVVQIFNEIGFKVLDDLVQKC
PLWSLTGISLDQFEALPVNFSMSERLIEIQKQIRGEIEFDFQDVPQQIQA
TLRSYQTEGVHWLERLRKMHLNGILADDMGLGKTLQAIIAVTQSKLEKGS
GCSLIVCPTSLVYNWKEEFRKFNPEFRTLVIDGVPSQRRKQLTALADRDV
AITSYNLLQKDVELYKSFRFDYVVLDEAHHIKNRTTRNAKSVKMIQSDHR
LILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKADN
MVALKKKVSPFILRRMKEDVLKDLPPVSEILYHCHLTESQKELYQSYAAS
AKQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDAPEPGDSAK
YDMLMDLLSSLVDSGHKTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTK
NRLDLVNQFNEDPSLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVEN
QATDRVHRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKVINSDDE
VVSKLTWEEVLELLQI
>CpB0922 transcription-repair coupling factor
MAMDFNPVNLDFSISKEFKEETLPLLLENIHPGATAFLAAKMFHDCRASV
IMITTPARLDDLFENLRTFLDQAPVEFPSSEIDLSPKLVNIDAVGKRDHL
LYSLNQHRAPIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTE
LCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIR
SYNPSDQLSTGKVSKISISPAYTEEASGGNYSHSLLDYFSTPPLYLFDNL
EILEDDFADISGTLSSLPDRFFSIGTLYDRISTSNQVYFSETPFPNVKNL
KENRVIIEAFHRNMEASRQAIPILYPEQIIQNDENPLLAFLQHLQEYMPP
HGKPLKLAIYSTKTKSLKEARALAETVARGDVEIYEKTGNLTSSFALVNE
AFAAISLSEFASTKVLRRQKQRTHFSVTTEEVFVPIPGETVVHIHNGIGK
FLGIEKKPNHLNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAAD
LHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVI
KFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRA
AVKAVCDGHRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAK
VQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKD
NLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFV
MEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGV
AHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADK
FGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNKQEYGG
GMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHTS
PLLFNDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQE
EMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCLSKS
EQTKKTLPYALSPTPELLVKEVIESIERGFLINAS
>CpB0055 ribonuclease III
MHPPIDITAIEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFL
GDAVLGLIVTEHLFLLFPSMDEGTLSTARASLVNAKACCRYTTVLGIGDY
LLIGKGEKIQSERGRLSAYANLFESILGAVYLDGGLSPARKLTVPLLPPR
EEILPLMSGNPKNLLQQFTQKQFRVLPVYQSTAVTDAQGNVSYQIQVLVN
QEVWGEGNASSKKEAEKIAAQQALDTYGNKNQNTMDV
>CpB0082 RNA polymerase beta
MFGENSRDIGVLSKEGLFDKLEIGIASDITIRDKWSCGEIKKPETINYRT
FKPEKGGLFCEKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTLSKVR
RERMAHIELAVPIVHIWFFKTTPSRIGNVLGMTASDLERVIYYEEYVVID
PGKTDLTKKQLLNDAQYREVVEKWGKDAFVAKMGGEAIYDLLKSEDLQSL
LKDLKERLRKTKSQQARMKLAKRLKIIEGFVSSSNHPEWMVLKNIPVVPP
DLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRV
DYSGRSVIIVGPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSA
KKMIQRGAPEVWDVLEEIIKGHPVLLNRAPTLHRLGIQAFEPVLIEGKAI
RIHPLVCAAFNADFDGDQMAVHVPLSVEAQLEAKVLMMAPDNIFLPSSGK
PVAIPSKDMTLGLYYLMADPTYFPEEHGGKTKIFKDEIEVLRALNNGGFI
DDVFGDRRDETGRGIHIHEKIKVRIDGQIIETTPGRVLFNRIVPKELGFQ
NYSMPSKRISELILQCYKKVGLEATVRFLDDLKDLGFIQATKAAISMGLK
DVRIPDIKSHILKDAYDKVAIVKKQYDDGIITEGERHSKTISIWTEVSEQ
LSDALYVEISKQTRSKHNPLFLMIDSGARGNKSQLKQLGALRGLMAKPNG
AIIESPITSNFREGLTVLEYSISSHGARKGLADTALKTADSGYLTRRLVD
VAQDVIITEKDCGTLNHIEISAIGQGSEELLPLKDRIYGRTVAEDVYQPG
DKSRLLAQSGDVLNSVQAEAIDDAGIETIKIRSTLTCESPRGVCAKCYGL
NLANGRLIGMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIIT
NSDGILVYMDLRVVLGQEGHNLVLNKKGALHVVGDEGRTLNEYKKLLSTK
SIESLEVFPVELGVKILVADGTPVSQGQRIAEVELHNIPIICDKPGFIKY
EDLVEGISTEKVVNKNTGLVELIVKQHRGELHPQIAIYDDADLSELVGTY
AIPSGAIISVEEGQRVDPGMLLARLPRGAIKTKDITGGLPRVAELVEARK
PEDAADIAKIDGVVDFKGIQKNKRILVVCDEMTGMEEEHLIPLTKHLIVQ
RGDSVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDIN
DKHIEIIVRQMLQKVRITDPGDTTLLFGEDVNKKEFYEENRRTEEDGGKP
AQAVPVLLGITKASLGTESFISAASFQDTTRVLTDAACCSKTDYLLGFKE
NVIMGHMIPGGTGFETHKRIKQYLEKEQEDLVFDFVSETECVC
>CpB0149 protein kinase
MESEKDIGAKFLGDYRILYRKGQSLWSEDLLAEHRFIKKRYLIRLLLPDL
GSSQPFMEAFHDVVVKLAKLNHPGILSIENVSESEGRCFLVTQEQDIPIL
SLTQYLKSIPRKLTELEIVDIVSQLASLLDYVHSEGLAQEEWNLDSVYIH
ILNGVPKVILPDLGFASLIKERILDGFISDEENRESKIKERVLLHTSEGK
QGREDTYAFGAITYYLLFGFLPQGIFPMPSKVFSDFIYDWDFLISSCLSC
FMEERAKELFPLIRKKTLGEELQNVVTNCIESSLREVPDPLESSQNLPQA
VLKVGETKVSHQQKESAEHLEFVLVEACSIDEAMDTAIESESSSGVEEEG
YSLALQSLLVREPVVSRYVEAEKEEPKPQPILTEMVLIEGGEFSRGSVEG
QRDELPVHKVILHSFFLDVHPVTNEQFIRYLECCGSEQDKYYNELIRLRD
SRIQRRSGRLVIEPGYAKHPVVGVTWYGASGYAEWIGKRLPTEAEWEIAA
SGGVAALRYPCGEEVEKSRANFFTADTTTVMSYPPNPYGLYDMAGNVYEW
CQDWYGYDFYEISAQEPESPQGPAQGVYRVLRGGCWKSLKDDLRCAHRHR
NNPGAVNSTYGFRCAKNIN
>CpB0164 lamin 2-like protein
MRAGGSLVTTYPKEGQRLRSPEQLRVLDDLVQSYPNHLHAIELDCGAIPQ
DLIGATYIITFADFSAYILSLRSYQANSPSDDTWGIWFGSIDDPVQAVIS
FLKDHGFALPSTLAQDPLLCTNK
>CpB0105 hypothetical protein
MPFRKFSNQNPMLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLIC
IPPFISARWSQIAFIESQEGENKDQGTLRLHLIDGKIISIPNLDQSIIDI
AFQEHLLYLETSQSGKEDSRDDDKLGVGVLMNVLQQITKGNDIQVLPKNL
ISPLFSGTNPIEAILQHTPEHKDHPDAPTDVLEKMADVIRVLSGNNATLL
PRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTN
PLNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT
>CpB0372 transcription initiation factor sigmaD protein
MKTQQTQNIIEVWNFYWETQEIEYRDSLIEFYLPLVKSVVHRLISGMPSH
VKTEDLYASGVEGLVRAVERYNPERSRRFEGYAVFLIKAAIIDDLRKQDW
VPRSVHQKANKLSGAMDSLRQSLGKEPTDLELCEYLNISQQELSGWFVSA
RPALIVSLNEEWPSQSDEGAGMALEERIPDERAETGYDVVDKQEFSLCLA
NAIQELEEKERKVMALYYYEELVLKEIGKVLGVSESRVSQIHSKALLKLR
AALSAFR
>CpB0597 bltD, spermine/spermidine acetyltransferase
MTAEKQNTGILGLEIRYTLPSDATYMLKWLNDPKILRGFPIQTEAEIRET
VNFWVGFYRYHSSLTAVYNGNVAGVATLVLNPYVKVSHHALISIIVGEEF
RNKGIGTALLNNLIHLAKTRFKLEVLYLEVYEGNPALHLYQRFGFVEVGR
QNRFYKDEIGYLAKTTMEKDL
>CpB0521 hrcA, heat-inducible transcription repressor
MTFSGSFPIMLSVTIVLVGLEMARSKVSKRDSKILDILFATTELYLKTGQ
PVGSKTLKESFCSDLSTATIRNYFAELEAEGFLKKNHTSGGRIPTDLALR
HYVDHQEECPEAEISAPIFDKISQLPSESRNIIKDLQKATELLGEILDLP
TFFSSPRFENDSVTNIQITQVDKQRAVTILSTEFGQIFTDTLWLPEACDT
LSIKRIEKFLQNYIRKLPTNEELSKKEEHLSMSLYNEVVVRYLTRYCNFS
EEDLYQTGMSKLLKYEAFKDPEVLALGLSLFENRRQMCELLNIGMHKGRA
TAFIGKELSDILGTSNPGCSVITIPYYMNRSPLGALGILGPINLPYKEAL
PLLKLFANKINETLTQSFYKFKLSFRRPLTSNCKLSNEPILRTEYSSIKL
LPSKETL
>CpB0076 nusG, transcription antitermination factor
MYKWYVVQVFTAQEKKVKKALEDFKESSGMTDFIQEIILPIENVMEVKKG
EHKVVEKYIWPGYLLVKMHLTDESWLYVKSTAGIVEFLGGGVPVALSEDE
VRSILTDIEEKKSGVVQKHQFEVGSRVKINDGVFVNFIGMVSEVFHDKGR
LSVMVSIFGRETRVDDLEFWQVEEVAPGQESE
>CpB0095 pkn1, Pkn1
MERYDIVRIIGKGGMGEVYLAYDPVCSRKVALKKIREDLAENPLLKRRFL
REARIAADLIHPGVVPVYTIYSEKDPVYYTMPYIEGYTLKTLLKSVWQKE
SLSKELAEKTSVGAFLSIFHKICCTIEYVHSRGILHRDLKPDNILLGLFS
EAVILDWGAAVACGEEEDLLDIDVSKEEVLSSRMTIPGRIVGTPDYMAPE
RLLGHPASKSTDIYALGVVLYQMLTLSFPYRRKKGKKIVLDGQRIPSPQE
VAPYREIPPFLSAVVMRMLAVDPQERYSSVTELKEDIESHLKGSPKWTLT
TALPPKKSSSWKLNEPILLSKYFPMLEVSPASWYSLAISNIESFSEMRLE
YTLSKKGLNEGFGILLPTSENALGGDFYQGYGFWLHIKERTLSVSLVKNS
LEIQRCSQDLESDKETFLIALEQHNHSLSLFVDGTTWLIHMNYLPSRSGR
VAIIVRDMEDILEDIGIFESSGSLRVSCLAVPDAFLAEKLYDRALVLYRR
IAESFPGRKEGYEARFRAGITVLEKASTDNNEQEFALAIEEFSKLHDGVA
APLEYLGKALVYQRLQEYNEEIKSLLLALKRYSQHPEIFRLKDHVVYRLH
ESFYKRDRLALVFMILVLEIAPQAITPGQEEKILVWLKDKSRATLFCLLD
PTVLELRSSKMELFLSYWSGFIPHLNSLFHRAWDQSDVRALIEIFYVACD
LHKWQFLSSCIDIFKESLEDQKATEEIVEFSFEDLGAFLFAIQSIFNKED
AEKIFVSNDQLSPILLVYIFDLFANRALLESQGEAIFQALDLIRSKVPEN
FYHDYLRNHEIRAHLWCRNEKALSTIFENYTEKQLKDEQHELFVLYGCYL
ALIQGAEAAKQHFDVCREDRIFPASLLARNYNRLGLPKDALSYQERRLLL
RQKFLYFHCLGNHDERDLCQTMYHLLTEEFQL
>CpB0821 rsbU, RsbU
MIPFTKTIGFRLWLACAVAIIAPLGINIVWLNLDQYRTIVSAISTALKEN
AAFKANTLTQIVPLNVDVLSLFSDVLDLDAGIPETPNVLLSNEMQKVFQG
IYNEISLIKVFPNGDKIVVASSIPEHLGENYNHKIDIPKNTPFLAALKQS
PKNQEVFSVMQANVFDAKTQELQGILYTTFSAESLLKDLLINKQSYLTVK
TAILSKYGVILKASDPALHLHTVYPDMTKEKFCQVFLNDDPCPIDSELGP
LTLSPLDIGENFYSFKIKDTEIWGCIENVPSIDIAVLSYAKKEESFAPLW
RRARMYTAYFFCILLGSLIAFIVARRLSLPIRKLATAMIESRKNKNCLYT
DDSLGFEINRLGHIFNAMVENLHKQQHLAKTNFEMKENAQNALHLGEQAQ
QRLLPNTLPSYPHIELAKAYIPAITVGGDFFDVFVVGEGSKARLFLIVAD
ASGKGVNACGYSLFLKNMLRTFLSRSSSLQQAIQETSRLFYNNTKNSGMF
VTLCVYCYHQTSNTMEYYSCGHPPACYLDPDGETSWLFHPGMALGFLPEV
ANITSKLFHPKPGSLFVLYSDGITEAHNNNNDMFGEERLQAAIQGLTGKS
AADAVHRLMLSVKTFVGNSHQHDDITLLILKVLES
>CpB0711 spoOJ, Soj antagonist
MTEEISKDTIIEVAIDDIRVSPFQPRRVFSNEELQELIASIKAVGLIHPP
VVREICTGDRVLYYELIAGERRWRAMQLAGATTIPVILKHVIADGTAAEA
TLIENIQRVNLNPIEMAEAFKRLIHVFGLTQDKVAYKVGKKRSTVANYLR
LLALSKTIQESLLQGQITLGHAKVILTLEDPILREKLNEIIIQEHLAVRE
AELIAKQLISEEGSSIELKPTPLDMAESSKQHEELQQRLSDLCGYKVQIK
TRGSKATVSFHLQNTQDLQKLEAWLSSHGTLSESLS
>CpB0778 tctD, trans-activating transcription regulator
MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCE
YLLLPEQIFSPGIFPEEDLIVLFDTFQEEAITKVLNQGATGYLLRPITAK
VLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPS
EAGILKKLLINRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGP
YGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE