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2024-04-28 16:04:52

Gene list

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COG category: Transcription
Organism: Xanthomonas axonopodis pv. citri str. 306, 306

Number of genes found: 255

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Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XAC0039 transcriptional regulatorchromosome CDS48629 876 + 0.655251
XAC0064 acetyltransferasechromosome CDS77555 567 - 0.663139
XAC0070 ankyrin-like proteinchromosome CDS82247 1722 + 0.69338
XAC0136 two-component system regulatory proteinchromosome CDS159958 633 + 0.696682
XAC0140 transcriptional regulatorchromosome CDS162764 3348 - 0.68399
XAC0166 transcriptional regulator lacI familychromosome CDS205185 1029 + 0.690962
XAC0175 transcriptional regulator asnC familychromosome CDS215008 483 + 0.666667
XAC0188 transcriptional regulatorchromosome CDS230731 582 - 0.536082
XAC0218 conserved hypothetical proteinchromosome CDS266514 645 + 0.657364
XAC0251 transcriptional regulator tetR familychromosome CDS299947 633 + 0.669826
XAC0253 transcriptional regulator araC familychromosome CDS301169 762 - 0.670604
XAC0266 transcriptional regulator acrR familychromosome CDS320996 621 + 0.68599
XAC0281 transcriptional regulator marR familychromosome CDS335549 462 + 0.636364
XAC0302 transcriptional regulator lysR familychromosome CDS359407 954 + 0.646751
XAC0312 transcriptional regulator lysR familychromosome CDS373182 918 + 0.678649
XAC0316 transcriptional regulator lysR familychromosome CDS377525 888 - 0.676802
XAC0318 transcriptional regulator merR familychromosome CDS379809 408 - 0.666667
XAC0340 conserved hypothetical proteinchromosome CDS407014 432 + 0.652778
XAC0351 transcriptional regulator MarR familychromosome CDS419273 477 + 0.67086
XAC0451 transcriptional regulator marR/emrR familychromosome CDS540888 489 - 0.654397
XAC0474 N-acetyltransferasechromosome CDS564086 492 + 0.678862
XAC0508 transcriptional regulator lysR familychromosome CDS595808 903 - 0.705426
XAC0524 transcriptional regulator pbsX familychromosome CDS614976 378 - 0.695767
XAC0559 conserved hypothetical proteinchromosome CDS660837 465 - 0.668817
XAC0581 transcriptional regulator araC familychromosome CDS683619 924 + 0.645022
XAC0625 conserved hypothetical proteinchromosome CDS739348 966 + 0.642857
XAC0671 transcriptional regulatorchromosome CDS796213 906 + 0.69426
XAC0711 transcriptional regulator gntR familychromosome CDS844988 768 + 0.679688
XAC0713 transcriptional regulator lacI familychromosome CDS847117 1068 + 0.65824
XAC0730 two-component system regulatory proteinchromosome CDS870648 720 - 0.655556
XAC0737 transcriptional regulatorchromosome CDS877322 1401 - 0.673091
XAC0744 conserved hypothetical proteinchromosome CDS885048 525 + 0.641905
XAC0745 acetyltransferasechromosome CDS885578 477 + 0.645702
XAC0807 transcriptional regulator tetR/acrR familychromosome CDS961224 645 + 0.666667
XAC0884 transcriptional regulator marR familychromosome CDS1046335 474 - 0.685654
XAC0896 two-component system regulatory proteinchromosome CDS1058087 465 - 0.658065
XAC0898 two-component system regulatory proteinchromosome CDS1060455 708 - 0.686441
XAC0917 transcriptional regulatorchromosome CDS1080998 600 + 0.691667
XAC0922 ECF sigma factorchromosome CDS1084577 666 - 0.68018
XAC1055 hypothetical proteinchromosome CDS1212440 588 - 0.556122
XAC1095 conserved hypothetical proteinchromosome CDS1248288 750 + 0.674667
XAC1140 conserved hypothetical proteinchromosome CDS1291803 261 + 0.597701
XAC1161 conserved hypothetical proteinchromosome CDS1324558 591 + 0.715736
XAC1166 conserved hypothetical proteinchromosome CDS1329454 531 + 0.659134
XAC1185 conserved hypothetical proteinchromosome CDS1350353 639 + 0.652582
XAC1229 two-component system regulatory proteinchromosome CDS1407686 645 + 0.654264
XAC1298 transcriptional regulatorchromosome CDS1486143 696 + 0.706897
XAC1311 transcriptional regulatorchromosome CDS1513070 1386 - 0.681097
XAC1398 conserved hypothetical proteinchromosome CDS1611106 363 + 0.655647
XAC1442 transcriptional regulatorchromosome CDS1664995 816 - 0.715686
XAC1455 transcriptional regulator marR familychromosome CDS1679787 501 + 0.600798
XAC1480 transcriptional regulatorchromosome CDS1709363 1035 - 0.614493
XAC1493 transcriptional regulatorchromosome CDS1725475 330 + 0.524242
XAC1499 transcriptional regulatorchromosome CDS1733523 297 + 0.538721
XAC1548 transcriptional regulator gntR familychromosome CDS1789425 363 - 0.603306
XAC1555 transcriptional regulatorchromosome CDS1795532 1107 + 0.673893
XAC1561 transcriptional regulatorchromosome CDS1804422 996 - 0.669679
XAC1612 transcriptional regulatorchromosome CDS1858906 714 + 0.602241
XAC1655 transcriptional regulatorchromosome CDS1907171 1002 + 0.662675
XAC1663 hypothetical proteinchromosome CDS1917391 537 + 0.569832
XAC1748 transcriptional regulatorchromosome CDS2009334 945 + 0.679365
XAC1883 conserved hypothetical proteinchromosome CDS2188117 249 + 0.666667
XAC1912 serine/threonine kinasechromosome CDS2237697 849 + 0.537102
XAC1968 response regulatorchromosome CDS2300074 384 - 0.583333
XAC1970 response regulatorchromosome CDS2302086 633 - 0.660348
XAC2014 transcriptional regulator tetR familychromosome CDS2357615 633 - 0.652449
XAC2037 iron dependent repressorchromosome CDS2382218 450 + 0.686667
XAC2049 conserved hypothetical proteinchromosome CDS2393976 198 + 0.611111
XAC2166 transcriptional regulatorchromosome CDS2535718 687 - 0.62591
XAC2168 two-component system regulatory proteinchromosome CDS2539741 642 + 0.67134
XAC2171 transcriptional regulator lysR familychromosome CDS2542779 921 - 0.65038
XAC2176 conserved hypothetical proteinchromosome CDS2549088 297 + 0.626263
XAC2191 two-component system regulatory proteinchromosome CDS2564057 576 + 0.637153
XAC2204 phage-related proteinchromosome CDS2588897 228 + 0.675439
XAC2228 transcriptional regulator tetR familychromosome CDS2611822 612 - 0.650327
XAC2313 transcriptional regulator lacI familychromosome CDS2707521 1023 - 0.692082
XAC2317 conserved hypothetical proteinchromosome CDS2710739 1239 + 0.671509
XAC2350 conserved hypothetical proteinchromosome CDS2745596 456 - 0.644737
XAC2429 conserved hypothetical proteinchromosome CDS2828598 279 - 0.587814
XAC2443 conserved hypothetical proteinchromosome CDS2842906 1395 + 0.54552
XAC2452 conserved hypothetical proteinchromosome CDS2856807 372 - 0.615591
XAC2490 conserved hypothetical proteinchromosome CDS2901431 885 + 0.674576
XAC2493 two-component system regulatory proteinchromosome CDS2908126 987 + 0.665653
XAC2497 transcriptional regulator tetR/acrR familychromosome CDS2917344 660 + 0.656061
XAC2500 transcriptional regulator lacI familychromosome CDS2923216 996 - 0.682731
XAC2515 transcriptional regulator asnC/lrp familychromosome CDS2944665 441 - 0.662132
XAC2551 transcriptional regulatorchromosome CDS3009586 681 + 0.637298
XAC2587 conserved hypothetical proteinchromosome CDS3048046 357 - 0.621849
XAC2595 maltose transport gene repressorchromosome CDS3056086 1122 + 0.666667
XAC2791 transcriptional regulatorchromosome CDS3271850 993 + 0.666667
XAC2838 transcriptional regulator lysR familychromosome CDS3327429 915 + 0.693989
XAC2839 transcriptional regulatorchromosome CDS3329048 954 + 0.651992
XAC2841 transcriptional regulatorchromosome CDS3330683 675 - 0.663704
XAC2845 transcriptional regulatorchromosome CDS3337365 621 + 0.640902
XAC2850 conserved hypothetical proteinchromosome CDS3342411 612 - 0.661765
XAC2857 conserved hypothetical proteinchromosome CDS3349777 543 + 0.655617
XAC2934 conserved hypothetical proteinchromosome CDS3438758 459 + 0.655773
XAC2939 acetyltransferasechromosome CDS3444259 540 + 0.624074
XAC2966 conserved hypothetical proteinchromosome CDS3470487 228 - 0.662281
XAC3007 conserved hypothetical proteinchromosome CDS3518386 774 - 0.652455
XAC3012 conserved hypothetical proteinchromosome CDS3522485 255 + 0.65098
XAC3052 transcriptional regulatorchromosome CDS3572649 609 - 0.646962
XAC3134 transcriptional regulator lysR familychromosome CDS3686345 903 + 0.66113
XAC3153 acetyltransferasechromosome CDS3703077 642 - 0.641745
XAC3288 conserved hypothetical proteinchromosome CDS3867874 339 - 0.640118
XAC3362 TonB-like proteinchromosome CDS3958229 1299 - 0.660508
XAC3407 conserved hypothetical proteinchromosome CDS4014669 222 + 0.63964
XAC3432 conserved hypothetical proteinchromosome CDS4040520 660 - 0.686364
XAC3443 response regulatorchromosome CDS4054139 1149 + 0.670148
XAC3445 transcriptional regulatorchromosome CDS4058597 894 - 0.638702
XAC3459 transcriptional regulator lysR familychromosome CDS4081746 885 + 0.671186
XAC3461 transcriptional regulatorchromosome CDS4086091 654 + 0.642202
XAC3480 transcriptional regulator luxR/uhpA familychromosome CDS4112580 639 - 0.663537
XAC3497 hypothetical proteinchromosome CDS4135035 384 + 0.609375
XAC3532 transcriptional regulatorchromosome CDS4176196 729 + 0.662551
XAC3618 conserved hypothetical proteinchromosome CDS4291532 507 + 0.712032
XAC3708 transcriptional regulatorchromosome CDS4383899 897 + 0.670011
XAC3761 transcriptional regulatorchromosome CDS4438977 927 - 0.667745
XAC3771 hypothetical proteinchromosome CDS4448311 219 - 0.694064
XAC3772 transcriptional regulator lysR familychromosome CDS4448376 864 - 0.670139
XAC3927 conserved hypothetical proteinchromosome CDS4618988 555 + 0.643243
XAC3950 conserved hypothetical proteinchromosome CDS4644639 882 - 0.5839
XAC3953 conserved hypothetical proteinchromosome CDS4649598 315 - 0.542857
XAC3961 transcriptional regulator tetR familychromosome CDS4657475 648 + 0.666667
XAC3993 two-component system regulatory proteinchromosome CDS4684547 603 - 0.661692
XAC4038 transcriptional regulator lysR familychromosome CDS4730010 915 - 0.69071
XAC4056 transcriptional regulatorchromosome CDS4752274 201 - 0.577114
XAC4116 serine/threonine kinasechromosome CDS4829001 3708 - 0.702265
XAC4172 transcriptional regulatorchromosome CDS4905547 1158 + 0.695164
XAC4237 transcriptional regulatory proteinchromosome CDS5002163 747 - 0.67336
XAC4272 transcriptional regulator lacI familychromosome CDS5042064 1053 + 0.694207
XAC4350 transcriptional regulatorchromosome CDS5143356 933 + 0.717042
XAC4359 sugar diacide regulatorchromosome CDS5153769 1212 - 0.69802
acoK transcriptional regulatorchromosome CDS4026449 2772 + 0.667388
acoR transcriptional regulator acoRchromosome CDS773462 1986 - 0.688822
adpA transcriptional regulator araC familychromosome CDS4760796 1011 + 0.669634
ahyR transcriptional regulator ahyR/asaR familychromosome CDS3493810 765 - 0.63268
algH transcriptional regulatorchromosome CDS3425655 567 - 0.663139
algR two-component system regulatory proteinchromosome CDS736179 738 + 0.669377
algR transcriptional regulator proteinchromosome CDS4395361 777 - 0.67825
algU RNA polymerase sigma-H factorchromosome CDS1524062 621 + 0.626409
ameR transcriptional regulator tetR/acrR familychromosome CDS520225 618 + 0.621359
ampR transcriptional activator ampR familychromosome CDS3715677 876 + 0.703196
ampR B-lactamase regulatory proteinchromosome CDS4508823 948 - 0.67827
avtA valine-pyruvate aminotransferasechromosome CDS2152651 1284 + 0.662773
baeR two-component system regulatory proteinchromosome CDS3286708 690 + 0.644928
baf transcriptional regulatorchromosome CDS4707179 729 - 0.711934
blaI transcriptional regulator blaI familychromosome CDS3959517 366 - 0.639344
cebR transcriptional regulatorchromosome CDS4120821 1032 + 0.656008
colR two-component system regulatory proteinchromosome CDS3831602 678 - 0.638643
colR two-component system regulatory proteinchromosome CDS995272 747 + 0.637216
colR two-component system regulatory proteinchromosome CDS1401059 717 + 0.656904
creB two-component system regulatory proteinchromosome CDS3347644 693 - 0.694084
cspA major cold shock proteinchromosome CDS1692583 216 + 0.546296
cspA major cold shock proteinchromosome CDS2790530 210 - 0.62381
cysB transcriptional regulator lysR familychromosome CDS3934293 984 - 0.679878
dbpA ATP-dependent RNA helicasechromosome CDS2784754 1377 + 0.670298
deaD ATP-dependent RNA helicasechromosome CDS3299957 1899 - 0.678778
dinG ATP-dependent helicasechromosome CDS4721104 2136 - 0.658708
dnrO repressorchromosome CDS2863238 966 - 0.710145
ecfR extracytoplasmic sigma factorchromosome CDS4849390 540 - 0.67963
feaR transcriptional regulatorchromosome CDS4875665 672 + 0.654762
fis DNA-binding proteinchromosome CDS612956 273 - 0.619048
flbD transcriptional regulatorchromosome CDS1004256 1128 - 0.66578
fldY transcriptional regulatorchromosome CDS4883920 1308 - 0.714832
flgM flagellar proteinchromosome CDS2321035 312 + 0.628205
fliA RNA polymerase sigma factorchromosome CDS2258166 768 - 0.666667
gacA transcriptional regulator luxR/uhpA familychromosome CDS2463557 648 + 0.601852
gbpR galactose-binding protein regulatorchromosome CDS2023515 972 + 0.664609
glpR glycerol-3-phosphate regulon repressorchromosome CDS431189 771 - 0.662776
greA transcriptional elongation factorchromosome CDS2160878 477 + 0.616352
greB transcription elongation factor and transcript cleavagechromosome CDS3197922 507 + 0.656805
hrcA heat-inducible transcriptional repressorchromosome CDS1753445 1032 + 0.686047
hrpG HrpG proteinchromosome CDS1444841 792 - 0.611111
hrpXct HrpX proteinchromosome CDS1446457 1431 + 0.645003
hutC histidine utilization repressorchromosome CDS1892903 717 + 0.679219
icfG IcfG proteinchromosome CDS671960 2082 - 0.681076
kdgR transcriptional regulator kdgRchromosome CDS4929315 750 + 0.685333
kdpE two-component system regulatory proteinchromosome CDS903904 717 + 0.662483
lexA LexA repressorchromosome CDS1999076 642 + 0.646417
lexA LexA repressorchromosome CDS1362326 606 + 0.674918
lrp leucine responsive regulatory proteinchromosome CDS4366586 480 + 0.625
lytT two-component system regulatory proteinchromosome CDS2496349 693 - 0.627706
mdcY transcriptional regulator mdcY familychromosome CDS669438 720 + 0.666667
mecI methicillin resistance proteinchromosome CDS81857 387 + 0.666667
metR transcriptional regulator metE/metH familychromosome CDS398525 915 - 0.64918
mfd transcription-repair coupling factorchromosome CDS3350752 3465 + 0.658874
nocR transcriptional regulatorchromosome CDS2663622 918 + 0.67756
nusA N utilization substance protein Achromosome CDS3148007 1512 - 0.644841
nusB transcription termination factor NusBchromosome CDS890981 480 + 0.675
nusG transcription antitermination factorchromosome CDS1117906 558 + 0.596774
orf8 plasmid-related proteinchromosome CDS2624846 2301 + 0.661452
orf88 phage-related proteinchromosome CDS2550969 363 + 0.655647
oxyR hydrogen peroxide-inducible genes activatorchromosome CDS1766099 900 - 0.664444
oxyR oxidative stress transcriptional regulatorchromosome CDS1065898 942 - 0.632696
paiB transcriptional regulator protein Pai2chromosome CDS1861501 651 - 0.652842
parB chromosome partitioning proteinchromosome CDS4591768 927 + 0.685005
parB XACb0053 partition protein BpXAC64 CDS46022 1032 - 0.61531
pcaQ transcriptional regulatorchromosome CDS1041053 996 + 0.656627
pcaR transcriptional regulatorchromosome CDS443452 891 - 0.693603
phoB two-component system regulatory proteinchromosome CDS1203405 690 - 0.652174
phoP two-component system regulatory proteinchromosome CDS4714904 684 - 0.609649
pknB serine/threonine kinasechromosome CDS4846892 2298 - 0.692776
pobR PobR regulatorchromosome CDS423572 888 - 0.647523
prpR propionate catabolism regulatory proteinchromosome CDS1285128 1599 - 0.667917
prtI ECF sigma factorchromosome CDS4680937 516 - 0.674419
prtR transmembrane regulator protein prtRchromosome CDS4680188 753 - 0.671979
rbcR transcriptional regulatorchromosome CDS303652 957 - 0.648903
recG ATP-dependent DNA helicasechromosome CDS3997178 2154 - 0.670381
regR two-component system regulatory proteinchromosome CDS2070242 567 - 0.656085
relA ATP:GTP 3'-pyrophosphotranferasechromosome CDS3659326 2184 - 0.674908
rfaY RNA polymerase ECF-type sigma factorchromosome CDS3302023 498 + 0.65261
rhlB ATP-dependent RNA helicasechromosome CDS4502369 1716 - 0.680653
rhlE ATP-dependent RNA helicasechromosome CDS4282079 1383 + 0.680405
rhlE ATP-dependent RNA helicasechromosome CDS527052 1293 - 0.688322
rho transcription termination factor Rhochromosome CDS4505458 1281 + 0.623731
rnc ribonuclease IIIchromosome CDS1530542 681 + 0.654919
rnk regulator of nucleoside diphosphate kinasechromosome CDS1064918 417 - 0.669065
rpfD regulatory proteinchromosome CDS2174014 915 + 0.681967
rpfG response regulatorchromosome CDS2178162 1137 + 0.66051
rpoA RNA polymerase alpha subunitchromosome CDS1147785 999 + 0.620621
rpoB RNA polymerase beta subunitchromosome CDS1121568 4152 + 0.624759
rpoC RNA polymerase beta' subunitchromosome CDS1125870 4215 + 0.629182
rpoD RNA polymerase sigma-70 factorchromosome CDS4456172 1878 - 0.611821
rpoE RNA polymerase sigma factorchromosome CDS1588461 564 - 0.659574
rpoE ECF sigma factorchromosome CDS4850278 528 + 0.672348
rpoE RNA polymerase sigma-E factorchromosome CDS1939735 582 - 0.651203
rpoH RNA polymerase sigma-32 factorchromosome CDS4498013 876 - 0.630137
rpoN RNA polymerase sigma-54 factorchromosome CDS2300466 1404 - 0.674501
rpoN RNA polymerase sigma-54 factorchromosome CDS3474236 1440 + 0.68125
rpoZ RNA polymerase omega subunitchromosome CDS4002112 300 - 0.623333
salR transcriptional regulator lacI familychromosome CDS3888389 1053 + 0.662868
salR sal operon transcriptional repressorchromosome CDS4986041 1074 - 0.658287
scoF cold shock proteinchromosome CDS1542586 207 + 0.599034
slyA transcriptional regulator for cryptic hemolysinchromosome CDS1924031 465 - 0.666667
slyA transcriptional regulator for cryptic hemolysinchromosome CDS5088932 453 + 0.686534
smeR two-component system regulatory proteinchromosome CDS386341 684 - 0.697368
soxR transcriptional regulator soxR familychromosome CDS3511939 435 - 0.68046
spoT pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS3999812 2172 - 0.646869
tcsR two-component system regulatory proteinchromosome CDS4916239 669 + 0.651719
tctD two-component system regulatory proteinchromosome CDS4115955 702 - 0.648148
tex transcription-related proteinchromosome CDS2396350 2361 + 0.650995
trpI transcriptional regulatorchromosome CDS3178717 927 + 0.691478
uidR transcriptional regulator uid familychromosome CDS1334967 630 - 0.639683
vacB RNase Rchromosome CDS1809727 2145 + 0.640093
vanR transcriptional regulator gntR familychromosome CDS1038804 675 - 0.654815
virS virulence regulating proteinchromosome CDS626028 1011 + 0.669634
xylR xylose repressor-like proteinchromosome CDS90593 1158 + 0.683074
ybcM transcriptional regulatorchromosome CDS866458 795 - 0.677987
ybhD transcriptional regulatorchromosome CDS4109222 903 - 0.648948
yeaM transcriptional regulator araC familychromosome CDS2618236 795 + 0.611321
ygiX two-component system regulatory proteinchromosome CDS4668604 666 + 0.638138
yhjC transcriptional regulator lysR familychromosome CDS102007 912 + 0.666667
yoaA ATP-dependent helicasechromosome CDS3649621 2025 - 0.680988
yybA transcriptional regulator marR familychromosome CDS1665969 441 + 0.664399