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2024-05-01 04:27:18

Gene list

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COG category: Transcription
Organism: Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913

Number of genes found: 259

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Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XCC0040 transcriptional regulator lysR familychromosome CDS50748 903 - 0.677741
XCC0043 transcriptional regulatorchromosome CDS53055 891 + 0.681257
XCC0044 transcriptional regulatorchromosome CDS53983 570 - 0.642105
XCC0046 ankyrin-like proteinchromosome CDS55203 1713 + 0.683012
XCC0062 conserved hypothetical proteinchromosome CDS76469 351 + 0.652422
XCC0071 transcriptional regulatorchromosome CDS86108 198 - 0.651515
XCC0109 two-component system regulatory proteinchromosome CDS134703 633 + 0.691943
XCC0114 transcriptional regulatorchromosome CDS138970 3342 - 0.689707
XCC0150 transcriptional regulator lacI familychromosome CDS197489 1068 + 0.689139
XCC0157 transcriptional regulator asnC familychromosome CDS205937 483 + 0.681159
XCC0200 conserved hypothetical proteinchromosome CDS258648 486 + 0.67284
XCC0215 conserved hypothetical proteinchromosome CDS271235 2502 + 0.61311
XCC0233 transcriptional regulator tetR familychromosome CDS293350 633 + 0.688784
XCC0235 transcriptional regulator araC familychromosome CDS294619 738 - 0.723577
XCC0247 transcriptional regulator acrR familychromosome CDS312680 618 + 0.700647
XCC0263 transcriptional regulator marR familychromosome CDS327431 462 + 0.658009
XCC0285 transcriptional regulator lysR familychromosome CDS349536 894 + 0.677852
XCC0298 transcriptional regulator lysR familychromosome CDS365824 918 + 0.694989
XCC0301 transcriptional regulator lysR familychromosome CDS369189 888 - 0.685811
XCC0306 SIR2-like regulatory proteinchromosome CDS375884 882 + 0.693878
XCC0311 transcriptional regulatorchromosome CDS380782 918 - 0.66122
XCC0322 conserved hypothetical proteinchromosome CDS395041 429 + 0.666667
XCC0351 transcriptional regulator marR familychromosome CDS423272 477 + 0.679245
XCC0435 transcriptional regulator marR/emrR familychromosome CDS533757 489 - 0.664622
XCC0457 N-acetyltransferasechromosome CDS555699 492 + 0.695122
XCC0494 transcriptional regulator lysR familychromosome CDS592973 903 - 0.723145
XCC0510 transcriptional regulator pbsX familychromosome CDS616831 378 - 0.695767
XCC0524 helicasechromosome CDS632372 2904 + 0.576446
XCC0525 ATP-dependent DNA helicasechromosome CDS635272 1317 + 0.609719
XCC0585 conserved hypothetical proteinchromosome CDS707517 393 - 0.687023
XCC0672 transcriptional regulatorchromosome CDS811715 729 - 0.687243
XCC0691 conserved hypothetical proteinchromosome CDS834056 525 + 0.643809
XCC0692 acetyltransferasechromosome CDS834586 474 + 0.654008
XCC0755 transcriptional regulator tetR/acrR familychromosome CDS905818 696 + 0.663793
XCC0811 transcriptional regulator marR familychromosome CDS970097 471 - 0.664544
XCC0820 transcriptional regulatorchromosome CDS978118 744 - 0.680108
XCC0824 two-component system regulatory proteinchromosome CDS981881 465 - 0.668817
XCC0826 two-component system regulatory proteinchromosome CDS984249 708 - 0.685028
XCC0844 transcriptional regulatorchromosome CDS1004338 660 + 0.701515
XCC0847 ECF sigma factorchromosome CDS1006761 693 - 0.662338
XCC0993 conserved hypothetical proteinchromosome CDS1145940 750 + 0.696
XCC1034 conserved hypothetical proteinchromosome CDS1183923 294 + 0.619048
XCC1058 conserved hypothetical proteinchromosome CDS1220600 591 + 0.714044
XCC1063 conserved hypothetical proteinchromosome CDS1225544 531 + 0.647834
XCC1067 type III restriction-modification enzyme, helicase subunitchromosome CDS1227462 3123 + 0.582133
XCC1087 conserved hypothetical proteinchromosome CDS1254927 639 + 0.676056
XCC1097 conserved hypothetical proteinchromosome CDS1274587 630 + 0.634921
XCC1128 two-component system regulatory proteinchromosome CDS1317019 642 + 0.669782
XCC1190 transcriptional regulatorchromosome CDS1389083 1008 + 0.684524
XCC1215 transcriptional regulatorchromosome CDS1421815 627 - 0.633174
XCC1253 hypothetical proteinchromosome CDS1462105 411 - 0.583942
XCC1259 transcriptional regulatorchromosome CDS1472908 1383 - 0.683297
XCC1351 conserved hypothetical proteinchromosome CDS1573026 369 + 0.653117
XCC1396 transcriptional regulatorchromosome CDS1627075 864 - 0.736111
XCC1411 transcriptional regulator marR familychromosome CDS1643753 501 + 0.628743
XCC1437 transcriptional regulatorchromosome CDS1672955 1035 - 0.638647
XCC1453 helicasechromosome CDS1692939 3198 + 0.559725
XCC1463 hypothetical proteinchromosome CDS1710488 180 + 0.7
XCC1500 transcriptional regulator gntR familychromosome CDS1754089 363 - 0.597796
XCC1507 transcriptional regulatorchromosome CDS1760148 1041 + 0.673391
XCC1513 transcriptional regulatorchromosome CDS1769088 1053 - 0.662868
XCC1595 transcriptional regulatorchromosome CDS1863983 1020 + 0.673529
XCC1604 conserved hypothetical proteinchromosome CDS1874502 342 + 0.628655
XCC1631 conserved hypothetical proteinchromosome CDS1901388 300 + 0.583333
XCC1730 transcriptional regulatorchromosome CDS2009719 945 + 0.686772
XCC1807 conserved hypothetical proteinchromosome CDS2108385 327 + 0.681957
XCC1861 conserved hypothetical proteinchromosome CDS2168680 258 + 0.655039
XCC1934 response regulatorchromosome CDS2268197 384 - 0.580729
XCC1936 response regulatorchromosome CDS2270218 633 - 0.665087
XCC2018 hypothetical proteinchromosome CDS2367673 309 + 0.644013
XCC2027 transcriptional regulatorchromosome CDS2391038 636 - 0.691824
XCC2041 conserved hypothetical proteinchromosome CDS2409198 417 + 0.673861
XCC2106 conserved hypothetical proteinchromosome CDS2489792 135 - 0.511111
XCC2108 conserved hypothetical proteinchromosome CDS2491268 648 + 0.54321
XCC2158 conserved hypothetical proteinchromosome CDS2546862 201 - 0.631841
XCC2170 iron dependent repressorchromosome CDS2558063 468 - 0.668803
XCC2178 transcriptional regulatorchromosome CDS2566938 681 - 0.679883
XCC2180 two-component system regulatory proteinchromosome CDS2570912 642 + 0.665109
XCC2209 transcriptional regulator lacI familychromosome CDS2606001 1023 - 0.69697
XCC2213 conserved hypothetical proteinchromosome CDS2609275 1206 + 0.676617
XCC2358 conserved hypothetical proteinchromosome CDS2774000 1095 + 0.70137
XCC2361 two-component system regulatory proteinchromosome CDS2781286 984 + 0.682927
XCC2366 transcriptional regulator tetR/acrR familychromosome CDS2791465 660 + 0.665152
XCC2369 transcriptional regulator lacI familychromosome CDS2797430 996 - 0.687751
XCC2380 transcriptional regulator asnC/lrp familychromosome CDS2813561 441 - 0.675737
XCC2416 transcriptional regulatorchromosome CDS2874099 717 + 0.647141
XCC2456 conserved hypothetical proteinchromosome CDS2918108 357 - 0.616247
XCC2464 maltose transport gene repressorchromosome CDS2926204 1134 + 0.65873
XCC2591 hypothetical proteinchromosome CDS3074739 111 + 0.63964
XCC2627 transcriptional regulatorchromosome CDS3113769 993 + 0.695871
XCC2628 transcriptional regulatorchromosome CDS3115039 315 + 0.644444
XCC2659 transcriptional regulatorchromosome CDS3149916 423 + 0.685579
XCC2673 transcriptional regulator lysR familychromosome CDS3166147 933 + 0.679528
XCC2676 transcriptional regulatorchromosome CDS3170713 912 + 0.656798
XCC2678 transcriptional regulator lysR familychromosome CDS3172476 915 + 0.66776
XCC2680 transcriptional regulatorchromosome CDS3174973 690 - 0.692754
XCC2684 transcriptional regulatorchromosome CDS3181663 618 + 0.619741
XCC2689 conserved hypothetical proteinchromosome CDS3187257 597 - 0.683417
XCC2697 conserved hypothetical proteinchromosome CDS3195223 543 + 0.657459
XCC2765 conserved hypothetical proteinchromosome CDS3274279 459 + 0.660131
XCC2770 acetyltransferasechromosome CDS3279852 540 + 0.67963
XCC2796 conserved hypothetical proteinchromosome CDS3304147 228 - 0.671053
XCC2838 conserved hypothetical proteinchromosome CDS3350591 774 - 0.664083
XCC2843 conserved hypothetical proteinchromosome CDS3355331 252 + 0.670635
XCC2868 transcriptional regulatorchromosome CDS3392503 609 - 0.646962
XCC2916 RNA polymerase sigma-70 factorchromosome CDS3460597 573 + 0.630017
XCC2953 conserved hypothetical proteinchromosome CDS3514134 426 - 0.615023
XCC2955 transcriptional regulator lysR familychromosome CDS3515459 918 + 0.676471
XCC3029 acetyltransferasechromosome CDS3575170 528 - 0.668561
XCC3056 transcriptional regulator araC familychromosome CDS3618361 960 - 0.719792
XCC3105 conserved hypothetical proteinchromosome CDS3678716 492 + 0.648374
XCC3142 regulatory protein bphRchromosome CDS3722794 885 + 0.518644
XCC3143 conserved hypothetical proteinchromosome CDS3723706 294 - 0.55102
XCC3144 conserved hypothetical proteinchromosome CDS3724102 651 + 0.545315
XCC3205 TonB-like proteinchromosome CDS3804333 1302 - 0.697389
XCC3213 transcriptional regulatorchromosome CDS3815428 912 + 0.675439
XCC3246 transcriptional regulatorchromosome CDS3857946 870 + 0.678161
XCC3315 response regulatorchromosome CDS3932871 1113 + 0.677448
XCC3317 transcriptional regulatorchromosome CDS3937550 894 - 0.637584
XCC3332 transcriptional regulator lysR familychromosome CDS3961224 903 + 0.689922
XCC3334 transcriptional regulatorchromosome CDS3965352 654 + 0.663609
XCC3349 transcriptional regulator luxR/uhpA familychromosome CDS3988648 639 - 0.657277
XCC3386 transcriptional regulatorchromosome CDS4028032 1410 + 0.694326
XCC3394 two-component system regulatory proteinchromosome CDS4037194 720 + 0.661111
XCC3412 transcriptional regulator lacI familychromosome CDS4065218 1068 - 0.669476
XCC3414 transcriptional regulator gntR familychromosome CDS4067649 768 - 0.679688
XCC3448 transcriptional regulatorchromosome CDS4103605 906 - 0.706402
XCC3509 conserved hypothetical proteinchromosome CDS4177280 966 - 0.661491
XCC3545 conserved hypothetical proteinchromosome CDS4229816 474 - 0.654008
XCC3557 transcriptional regulator marR familychromosome CDS4244673 540 + 0.62963
XCC3608 conserved hypothetical proteinchromosome CDS4302724 534 - 0.705993
XCC3667 transcriptional regulatorchromosome CDS4367868 936 + 0.700855
XCC3719 transcriptional regulatorchromosome CDS4428035 933 - 0.670954
XCC3725 transcriptional regulator lysR familychromosome CDS4433064 927 + 0.678533
XCC3728 transcriptional regulatorchromosome CDS4435256 144 - 0.6875
XCC3776 ATP-dependent RNA helicasechromosome CDS4487426 1722 - 0.692799
XCC3792 conserved hypothetical proteinchromosome CDS4511710 1278 + 0.676056
XCC3871 conserved hypothetical proteinchromosome CDS4599981 540 + 0.692593
XCC3880 transcriptional regulator tetR familychromosome CDS4609115 648 + 0.680556
XCC3909 two-component system regulatory proteinchromosome CDS4637703 603 - 0.6733
XCC3932 transcriptional regulatorchromosome CDS4661740 954 - 0.6174
XCC3971 transcriptional regulatorchromosome CDS4706917 201 - 0.631841
XCC4053 transcriptional regulatorchromosome CDS4808471 1149 + 0.724978
XCC4073 transcriptional regulator araC familychromosome CDS4833477 1254 + 0.685805
XCC4129 transcriptional regulator lacI familychromosome CDS4917445 1053 + 0.711301
XCC4174 transcriptional regulatorchromosome CDS4980974 912 - 0.694079
XCC4205 acetyltransferasechromosome CDS5024051 612 + 0.635621
XCC4217 transcriptional regulatorchromosome CDS5035478 921 + 0.717698
XCC4225 sugar diacide regulatorchromosome CDS5048209 1179 - 0.692112
Z2969 phage-related proteinchromosome CDS3551778 429 - 0.578089
acoK transcriptional regulatorchromosome CDS3885237 2766 + 0.686913
acoR transcriptional regulatorchromosome CDS4135023 2043 + 0.682819
adpA transcriptional regulator araC familychromosome CDS2784853 1002 + 0.659681
ahyR transcriptional regulator ahyR/asaR familychromosome CDS3326728 777 - 0.667954
algH transcriptional regulatorchromosome CDS3258825 567 - 0.671958
algR two-component system regulatory proteinchromosome CDS4180542 747 - 0.697456
algR transcriptional regulator proteinchromosome CDS4378942 777 - 0.687259
algU RNA polymerase sigma factorchromosome CDS1524323 588 + 0.661565
algU RNA polymerase sigma-H factorchromosome CDS1483996 621 + 0.62963
ameR transcriptional regulator tetR/acrR familychromosome CDS511082 624 + 0.633013
ampR transcriptional activator ampR familychromosome CDS3591948 876 + 0.702055
ampR B-lactamase regulatory proteinchromosome CDS4494676 930 - 0.670968
attT AttT proteinchromosome CDS401464 459 - 0.570806
avtA valine-pyruvate aminotransferasechromosome CDS2139273 1233 + 0.666667
baf transcriptional regulatorchromosome CDS4664681 729 - 0.728395
blaI transcriptional regulator blaI familychromosome CDS3805624 420 - 0.619048
cebR transcriptional regulatorchromosome CDS3996974 1032 + 0.685078
colR two-component system regulatory proteinchromosome CDS938677 747 + 0.637216
colR two-component system regulatory proteinchromosome CDS1310600 720 + 0.683333
colR two-component system regulatory proteinchromosome CDS3680677 678 - 0.634218
creB two-component system regulatory proteinchromosome CDS3193226 696 - 0.70546
cspA major cold shock proteinchromosome CDS2689418 210 - 0.6
cspA major cold shock proteinchromosome CDS1656438 216 + 0.569444
cysB transcriptional regulator lysR familychromosome CDS3777860 981 - 0.688073
dbpA ATP-dependent RNA helicasechromosome CDS2683748 1377 + 0.672476
deaD ATP-dependent RNA helicasechromosome CDS3133068 1929 - 0.687403
dinG ATP-dependent helicasechromosome CDS4678394 2136 - 0.674157
dnrO repressorchromosome CDS2733448 1020 - 0.732353
fecI RNA polymerase sigma factorchromosome CDS4284664 510 + 0.701961
fis DNA-binding proteinchromosome CDS614868 273 - 0.626374
fldY transcriptional regulatorchromosome CDS4778217 1263 - 0.733967
flgM flagellar proteinchromosome CDS2289153 312 + 0.628205
fliA RNA polymerase sigma factorchromosome CDS2229977 768 - 0.666667
gacA transcriptional regulator luxR/uhpA familychromosome CDS2458773 648 - 0.621914
gbpR galactose-binding protein regulatorchromosome CDS2023412 972 + 0.684156
glpR glycerol-3-phosphate regulon repressorchromosome CDS434097 780 - 0.678205
greA putative transcriptional elongation factorchromosome CDS2147236 477 + 0.639413
greB transcription elongation factor and transcript cleavagechromosome CDS3039625 507 + 0.660749
hrcA heat-inducible transcriptional repressorchromosome CDS1718919 1110 + 0.683784
hrpG HrpG proteinchromosome CDS1357619 789 - 0.626109
hrpXct HrpX proteinchromosome CDS1359230 1431 + 0.661775
hutC histidine utilization repressorchromosome CDS1851267 738 + 0.678862
icfG IcfG proteinchromosome CDS4315333 2082 - 0.685399
kdgR transcriptional regulatorchromosome CDS4832684 750 + 0.692
kdpE two-component system regulatory proteinchromosome CDS851457 717 + 0.677824
lexA LexA repressorchromosome CDS1275494 606 + 0.70132
lexA LexA repressorchromosome CDS1999263 642 + 0.67757
lrp leucine responsive regulatory proteinchromosome CDS4349705 480 + 0.620833
mdcY transcriptional regulator mdcY familychromosome CDS4311881 720 + 0.659722
mecI methicillin resistance proteinchromosome CDS54813 387 + 0.671835
metR transcriptional regulator metE/metH familychromosome CDS386402 906 - 0.646799
mfd transcription-repair coupling factorchromosome CDS3196467 3468 + 0.664648
nusA N utilization substance protein Achromosome CDS2985804 1512 - 0.642857
nusB transcription termination factor NusBchromosome CDS839706 480 + 0.658333
nusG transcription antitermination factorchromosome CDS1038441 558 + 0.611111
oxyR hydrogen peroxide-inducible genes activator proteinchromosome CDS1731488 900 - 0.683333
oxyR oxidative stress transcriptional regulatorchromosome CDS989401 942 - 0.644374
paiB transcriptional regulator protein Pai2chromosome CDS1819868 639 - 0.661972
parB chromosome partitioning proteinchromosome CDS4573022 930 + 0.691398
pcaQ transcriptional regulatorchromosome CDS964654 1002 + 0.667665
pcaR transcriptional regulatorchromosome CDS446083 861 - 0.707317
phoB two-component system regulatory proteinchromosome CDS1122312 690 - 0.669565
phoP two-component system regulatory proteinchromosome CDS4671999 684 - 0.612573
pobR PobR regulatorchromosome CDS426627 897 - 0.672241
prpR propionate catabolism regulatory proteinchromosome CDS1177221 1602 - 0.69226
psrA transcriptional regulator tetR familychromosome CDS2326588 633 - 0.666667
rbcR transcriptional regulatorchromosome CDS295391 957 - 0.649948
recG ATP-dependent DNA helicasechromosome CDS3846693 2142 - 0.693744
regR two-component system regulatory proteinchromosome CDS2069153 576 - 0.689236
relA ATP:GTP 3'-pyrophosphotranferasechromosome CDS3490114 2172 - 0.692449
rfaY RNA polymerase sigma factorchromosome CDS1329943 1203 - 0.680798
rfaY RNA polymerase ECF-type sigma factorchromosome CDS3135169 501 + 0.658683
rhlE ATP-dependent RNA helicasechromosome CDS517880 1293 - 0.694509
rhlE ATP-dependent RNA helicasechromosome CDS710483 1389 - 0.688985
rho transcription termination factor Rhochromosome CDS4490489 1281 + 0.623731
rnc ribonuclease IIIchromosome CDS1490433 681 + 0.662261
rnk regulator of nucleoside diphosphate kinasechromosome CDS988741 408 - 0.678922
rpfD regulatory proteinchromosome CDS2154352 918 + 0.667756
rpfG response regulatorchromosome CDS2158339 1137 + 0.639402
rpoA RNA polymerase alpha subunitchromosome CDS1068246 999 + 0.621622
rpoB RNA polymerase beta subunitchromosome CDS1042071 4164 + 0.622959
rpoC RNA polymerase beta' subunitchromosome CDS1046335 4218 + 0.632053
rpoD RNA polymerase sigma-70 factorchromosome CDS4442015 1875 - 0.613867
rpoE RNA polymerase sigma factorchromosome CDS1552666 564 - 0.663121
rpoE RNA polymerase sigma-E factorchromosome CDS1939230 582 - 0.640893
rpoH RNA polymerase sigma-32 factorchromosome CDS4483068 876 - 0.619863
rpoN RNA polymerase sigma-54 factorchromosome CDS3307871 1437 + 0.677105
rpoN RNA polymerase sigma-54 factorchromosome CDS2268589 1404 - 0.682336
rpoZ RNA polymerase omega subunitchromosome CDS3861320 300 - 0.626667
salR sal operon transcriptional repressorchromosome CDS4874264 1086 - 0.662063
salR transcriptional regulator lacI familychromosome CDS3738917 1050 + 0.673333
scoF cold shock proteinchromosome CDS1503104 207 + 0.608696
slyA transcriptional regulator for cryptic hemolysinchromosome CDS4973010 444 + 0.707207
soxR transcriptional regulator soxR familychromosome CDS3344009 447 - 0.695749
spoT pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS3859007 2172 - 0.64825
tcsR two-component system regulatory proteinchromosome CDS4819053 669 + 0.653214
tctD two-component system regulatory proteinchromosome CDS3991989 702 - 0.65812
tex transcription-related proteinchromosome CDS2542320 2364 - 0.675127
trpI transcriptional regulatorchromosome CDS3017917 897 + 0.733556
uidR transcriptional regulator uid familychromosome CDS1239238 630 - 0.634921
umuD polymerase V subunitchromosome CDS3523920 480 + 0.645833
vacB RNase Rchromosome CDS1774917 2424 + 0.648102
vanR transcriptional regulator gntR familychromosome CDS962402 675 - 0.671111
wxcB kinasechromosome CDS724009 2295 + 0.571678
xylR xylose repressor-like proteinchromosome CDS63652 1158 + 0.7038
ybhD transcriptional regulatorchromosome CDS4033025 915 - 0.621858
ygiX two-component system regulatory proteinchromosome CDS4622747 666 + 0.666667
yoaA ATP-dependent helicasechromosome CDS3480746 2007 - 0.67713
yybA transcriptional regulator marR familychromosome CDS1628060 444 + 0.675676