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2024-04-29 10:59:05

Gene list

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COG category: Transcription
Organism: Thermoanaerobacter tengcongensis MB4, MB4

Number of genes found: 158

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermoanaerobacter tengcongensis MB4, MB4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TTE2750 Bacterial regulatory proteinschromosome CDS2644773 327 - 0.318043
NA TTE0403 conserved hypothetical proteinchromosome CDS422965 447 + 0.344519
NA TTE0390 hypothetical proteinchromosome CDS413496 606 + 0.250825
NA TTE1078 predicted transcriptional regulatorchromosome CDS1078503 375 + 0.336
NA TTE2023 hypothetical proteinchromosome CDS1971983 345 - 0.397101
NA TTE0412 hypothetical proteinchromosome CDS430211 285 + 0.301754
NA TTE0170 transcription regulator of sigma-E/sigma-K-dependent gene spoIIIDchromosome CDS174720 264 + 0.375
NA TTE2330 transcription repressor of class III stress geneschromosome CDS2212658 465 - 0.391398
NA TTE0404 hypothetical proteinchromosome CDS423420 327 + 0.324159
NA TTE1446 transcriptional pleiotropic repressorchromosome CDS1420226 753 - 0.38911
NA TTE2173 hypothetical proteinchromosome CDS2092312 186 - 0.370968
NA TTE2124 Helix-turn-helixchromosome CDS2040384 234 - 0.299145
NA TTE2732 conserved hypothetical proteinchromosome CDS2630828 420 - 0.340476
NA TTE1517 predicted RNA-binding protein homologous to eukaryotic snRNPchromosome CDS1481288 1713 + 0.339171
NA TTE2721 predicted transcriptional regulatorchromosome CDS2620575 207 - 0.357488
NA TTE1395 predicted nucleic-acid-binding protein implicated in transcription terminationchromosome CDS1377867 273 - 0.410256
NA TTE1775 hypothetical proteinchromosome CDS1721159 663 - 0.366516
NA TTE0496 conserved hypothetical proteinchromosome CDS508388 567 + 0.363316
NA TTE1325 predicted transcriptional regulator containing the HTH domainchromosome CDS1312578 507 + 0.362919
NA TTE0189 conserved hypothetical proteinchromosome CDS192962 330 + 0.339394
NA TTE2731 hypothetical proteinchromosome CDS2630465 282 - 0.304965
NA TTE0106 transcription regulator AbrBchromosome CDS108233 255 - 0.4
NA TTE2054 Helix-turn-helixchromosome CDS1990644 771 - 0.36965
NA TTE1242 predicted transcriptional regulatorchromosome CDS1243736 450 + 0.413333
NA TTE0340 putative transcriptional regulatorchromosome CDS360635 2022 + 0.364985
NA TTE0392 hypothetical proteinchromosome CDS414863 378 + 0.351852
NA TTE1819 CBS domainschromosome CDS1769412 1308 - 0.399847
NA TTE1634 predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domainschromosome CDS1585418 477 - 0.379455
NA TTE2563 transcription regulator spoVTchromosome CDS2451039 567 - 0.407407
NA TTE2381 putative transcriptional regulator, homologs of Bvg accessory factorchromosome CDS2270372 768 - 0.428385
NA TTE2778 hypothetical proteinchromosome CDS2670218 309 - 0.291262
NA TTE0413 hypothetical proteinchromosome CDS430500 201 + 0.323383
NA TTE1079 beta-lactamase regulatory protein 1chromosome CDS1078880 2589 + 0.338741
NA TTE2751 conserved hypothetical proteinchromosome CDS2645108 447 - 0.344519
NA TTE0438 predicted Transcriptional regulatorchromosome CDS450167 357 - 0.338936
NA TTE0698 conserved hypothetical proteinchromosome CDS704675 1179 + 0.489398
NA TTE0428 hypothetical proteinchromosome CDS443392 369 - 0.289973
NA TTE1857 hypothetical proteinchromosome CDS1802813 576 - 0.369792
NA TTE2666 hypothetical proteinchromosome CDS2564144 891 - 0.361392
NA TTE1595 conserved hypothetical proteinchromosome CDS1553964 258 - 0.468992
NA TTE0598 putative transcriptional regulatorchromosome CDS600684 2085 + 0.347242
AbrB TTE1069 Regulators of stationary/sporulation gene expressionchromosome CDS1069523 276 + 0.318841
AcoR TTE0687 putative regulator of acetoin metabolismchromosome CDS690256 2025 + 0.388148
AcoR2 TTE2508 putative regulator of acetoin metabolismchromosome CDS2393910 759 - 0.291173
AcrR TTE0070 Transcriptional regulatorchromosome CDS77827 576 + 0.355903
AcrR2 TTE0316 Transcriptional regulatorchromosome CDS333258 585 + 0.31453
AcrR3 TTE1839 Transcriptional regulatorchromosome CDS1788758 570 - 0.305263
ArgR TTE1301 Arginine repressorchromosome CDS1291921 456 + 0.385965
Aro8 TTE0839 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologschromosome CDS848363 1434 + 0.378661
ArsR TTE2468 predicted Transcriptional regulatorchromosome CDS2358686 366 - 0.330601
ArsR2 TTE2503 predicted Transcriptional regulatorchromosome CDS2390709 345 + 0.330435
AtoC TTE0191 AAA superfamily ATPases with N-terminal receiver domainchromosome CDS195516 2796 + 0.354077
AtoC2 TTE1998 AAA superfamily ATPases with N-terminal receiver domainchromosome CDS1946298 1650 - 0.391515
CitB TTE1681 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS1630110 627 - 0.382775
CspC TTE1738 Cold shock proteinschromosome CDS1684038 201 - 0.457711
DeoR TTE0184 Transcriptional regulator, contains sigma factor-related N-terminal domainchromosome CDS187799 942 - 0.355626
DeoR2 TTE1763 Transcriptional regulator, contains sigma factor-related N-terminal domainchromosome CDS1710392 1023 - 0.397849
ELP3 TTE1468 ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetyltransferase domain (onchromosome CDS1440835 1065 - 0.362441
FlgM TTE0492 Negative regulator of flagellin synthesis (anti-sigma-28 factor)chromosome CDS505260 276 + 0.300725
FliA TTE0118 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS120117 666 - 0.354354
FliA2 TTE1317 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS1306705 723 + 0.366528
FliA3 TTE1413 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS1394188 741 - 0.375169
GlpP TTE2004 Glycerol-3-phosphate responsive antiterminator (mRNA-binding)chromosome CDS1953604 570 - 0.398246
GlpR TTE1945 Transcriptional regulator of sugar metabolismchromosome CDS1891938 756 - 0.374339
GlpR2 TTE2588 Transcriptional regulator of sugar metabolismchromosome CDS2473348 807 - 0.375465
GntR TTE2558 Transcriptional regulatorchromosome CDS2446401 678 - 0.418879
GreA TTE2373 Transcription elongation factorchromosome CDS2262932 474 - 0.388186
HipB TTE2046 predicted Transcriptional regulatorchromosome CDS1985904 384 - 0.364583
HipB2 TTE2125 predicted Transcriptional regulatorchromosome CDS2040807 435 + 0.298851
HipB3 TTE2174 predicted Transcriptional regulatorchromosome CDS2092648 372 + 0.362903
HrcA TTE0953 Transcriptional regulator of heat shock genechromosome CDS957238 1032 + 0.375
HypB TTE0130 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenasechromosome CDS130313 657 + 0.39726
Lrp TTE2441 Transcriptional regulatorchromosome CDS2332832 336 - 0.372024
LysR TTE0082 Transcriptional regulatorchromosome CDS88813 894 - 0.333333
LysR2 TTE0987 Transcriptional regulatorchromosome CDS990753 885 - 0.325424
LytR TTE0026 Transcriptional regulatorchromosome CDS30406 1215 - 0.357202
LytR2 TTE0736 Transcriptional regulatorchromosome CDS738757 663 - 0.324284
LytR3 TTE0920 Transcriptional regulatorchromosome CDS924910 1176 + 0.397109
LytT TTE0561 Response regulators of cell autolysischromosome CDS566471 711 + 0.326301
LytT2 TTE0870 Response regulators of cell autolysischromosome CDS878631 738 - 0.361789
MarR TTE1201 Transcriptional regulatorchromosome CDS1200268 441 - 0.37415
MarR2 TTE2515 Transcriptional regulatorchromosome CDS2403920 501 - 0.345309
Mfd TTE2565 Transcription-repair coupling factor-superfamily II helicasechromosome CDS2452657 3510 - 0.408547
NagC TTE0090 Transcriptional regulatorchromosome CDS94148 948 + 0.422996
NagC2 TTE0761 Transcriptional regulatorchromosome CDS761051 1011 + 0.345203
NagC3 TTE1926 Transcriptional regulatorchromosome CDS1863834 1191 - 0.38623
NagC4 TTE1961 Transcriptional regulatorchromosome CDS1906019 939 - 0.419595
NagC5 TTE2418 Transcriptional regulatorchromosome CDS2310631 891 - 0.398429
NagC6 TTE2597 Transcriptional regulatorchromosome CDS2482757 1122 - 0.292335
NikR TTE0250 predicted Transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domainchromosome CDS254251 465 - 0.372043
NikR2 TTE2167 predicted Transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domainchromosome CDS2087503 276 - 0.413043
NusA TTE1396 Transcription terminatorchromosome CDS1378153 1041 - 0.414025
NusB TTE1292 Transcription termination factorchromosome CDS1283509 423 + 0.397163
NusG TTE0730 Transcription antiterminatorchromosome CDS733685 516 + 0.360465
NusG2 TTE2111 Transcription antiterminatorchromosome CDS2032791 540 - 0.381481
NusG3 TTE2307 Transcription antiterminatorchromosome CDS2190720 525 - 0.386667
OmpR TTE0481 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS491950 678 + 0.390855
OmpR2 TTE0774 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS773554 675 - 0.368889
OmpR3 TTE1016 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS1018564 690 + 0.372464
OmpR4 TTE1633 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS1584674 723 - 0.403873
OmpR6 TTE2474 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS2362744 696 - 0.333333
OmpR7 TTE2570 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS2460236 681 - 0.417034
OmpR8 TTE2689 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domainchromosome CDS2584635 696 - 0.395115
PhnF TTE0461 Transcriptional regulatorchromosome CDS474906 726 + 0.384298
PspC TTE0864 putative stress-responsive transcriptional regulatorchromosome CDS872646 408 + 0.387255
PspF TTE0180 NtrC family Transcriptional regulator, ATPase domainchromosome CDS182766 2904 + 0.362259
PspF2 TTE0550 NtrC family Transcriptional regulator, ATPase domainchromosome CDS556673 1410 + 0.310638
PspF3 TTE0717 NtrC family Transcriptional regulator, ATPase domainchromosome CDS719616 1437 + 0.359777
PspF4 TTE0825 NtrC family Transcriptional regulator, ATPase domainchromosome CDS833324 1317 + 0.332574
PspF6 TTE0268 NtrC family Transcriptional regulator, ATPase domainchromosome CDS280611 1779 - 0.364812
PspF7 TTE0331 NtrC family Transcriptional regulator, ATPase domainchromosome CDS348585 2706 + 0.335181
PurR TTE0053 Transcriptional regulatorchromosome CDS60661 1059 + 0.355052
PurR2 TTE0201 Transcriptional regulatorchromosome CDS207516 1017 + 0.346116
PurR3 TTE0349 Transcriptional regulatorchromosome CDS373480 1086 + 0.350829
PurR4 TTE0480 Transcriptional regulatorchromosome CDS490882 1014 + 0.406312
PurR5 TTE0760 Transcriptional regulatorchromosome CDS759967 1032 + 0.327519
PurR6 TTE0797 Transcriptional regulatorchromosome CDS793608 1011 + 0.37092
PurR7 TTE0803 Transcriptional regulatorchromosome CDS800966 1014 + 0.380671
PurR8 TTE1952 Transcriptional regulatorchromosome CDS1898747 996 - 0.408635
PurR9 TTE2576 Transcriptional regulatorchromosome CDS2466315 1026 - 0.433723
RecG TTE1492 RecG-like helicasechromosome CDS1458346 2049 - 0.390922
Rho TTE0138 Transcription termination factorchromosome CDS137437 1467 + 0.404908
RimI TTE0218 Acetyltransferaseschromosome CDS225501 960 + 0.34375
RimI2 TTE0220 Acetyltransferaseschromosome CDS227288 954 + 0.37631
Rnc TTE1469 dsRNA-specific ribonucleasechromosome CDS1441896 687 - 0.409025
RpiR TTE0211 Transcriptional regulatorchromosome CDS217737 849 + 0.381625
RpiR2 TTE1212 Transcriptional regulatorchromosome CDS1212393 792 + 0.364899
RpiR3 TTE1343 Transcriptional regulatorchromosome CDS1326292 864 + 0.37037
RpiR4 TTE2419 Transcriptional regulatorchromosome CDS2311532 858 - 0.368298
RpoA TTE2263 DNA-directed RNA polymerase alpha subunit/40 kD subunitchromosome CDS2161500 948 - 0.405063
RpoB TTE2301 DNA-directed RNA polymerase beta subunit/140 kD subunit (split gene in Mjan, Mthe, Aful)chromosome CDS2184491 3705 - 0.426991
RpoC TTE2300 DNA-directed RNA polymerase beta subunit/160 kD subunit (split gene in archaea and Syn)chromosome CDS2180905 3552 - 0.423986
RpoD TTE1259 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)chromosome CDS1259648 696 + 0.383621
RpoD2 TTE1636 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)chromosome CDS1586274 795 - 0.378616
RpoD3 TTE1637 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)chromosome CDS1587123 726 - 0.356749
RpoD4 TTE1755 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)chromosome CDS1701569 1119 - 0.411975
RpoD5 TTE2104 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)chromosome CDS2026723 798 - 0.363409
RpoE TTE0323 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS340470 489 - 0.312883
RpoE2 TTE0872 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS881244 576 + 0.369792
RpoE3 TTE1557 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS1517211 465 + 0.331183
RpoE4 TTE1559 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS1518720 450 + 0.348889
RpoE5 TTE2178 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS2094127 531 + 0.308851
RpoE6 TTE2311 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS2193222 660 - 0.40303
RpoE7 TTE2400 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologschromosome CDS2289830 501 + 0.349301
RpoN TTE1764 DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologschromosome CDS1711533 1356 - 0.385693
RpoZ TTE1510 DNA-directed RNA polymerase subunit K/omegachromosome CDS1476509 213 - 0.431925
RsbU TTE2396 Serine phosphatase RsbU, regulator of sigma subunitchromosome CDS2285220 2358 - 0.378287
Sir2 TTE1570 NAD-dependent protein deacetylases, Sir2 familychromosome CDS1529328 729 - 0.397805
Sir2.2 TTE1740 NAD-dependent protein deacetylases, Sir2 familychromosome CDS1685915 753 - 0.40239
Spo0J TTE2041 predicted Transcriptional regulatorchromosome CDS1981182 1200 - 0.38
Spo0J2 TTE2069 predicted Transcriptional regulatorchromosome CDS2000302 1299 - 0.362587
Spo0J3 TTE2081 predicted Transcriptional regulatorchromosome CDS2008292 1278 - 0.352895
Spo0J4 TTE2790 predicted Transcriptional regulatorchromosome CDS2679770 864 - 0.37963
Spo0J5 TTE2792 predicted Transcriptional regulatorchromosome CDS2681525 807 - 0.375465
SpoT TTE1195 Guanosine polyphosphate pyrophosphohydrolases/synthetaseschromosome CDS1193873 2157 + 0.396384
VacB TTE0983 Exoribonucleaseschromosome CDS985795 2127 + 0.38787
WecD TTE0389 Histone acetyltransferase HPA2 and related acetyltransferaseschromosome CDS412540 486 - 0.390947
WecD2 TTE0782 Histone acetyltransferase HPA2 and related acetyltransferaseschromosome CDS782361 546 + 0.39011