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2024-05-03 23:19:21

Gene list

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COG category: Transcription
Organism: Deinococcus radiodurans, R1

Number of genes found: 176

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Deinococcus radiodurans, R1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DR0005 conserved hypothetical proteinchromosome 1 CDS5438 678 + 0.699115
DR0012 chromosome partitioning proteinchromosome 1 CDS13333 867 - 0.685121
DR0016 conserved hypothetical proteinchromosome 1 CDS16307 741 - 0.720648
DR0020 ribonuclease II family proteinchromosome 1 CDS19258 1386 + 0.721501
DR0055 repressor protein, putativechromosome 1 CDS49989 951 + 0.719243
DR0074 transcriptional regulator, TetR familychromosome 1 CDS71920 594 - 0.688552
DR0087 conserved hypothetical proteinchromosome 1 CDS88873 474 - 0.651899
DR0125 acetyltransferase, putativechromosome 1 CDS122858 516 - 0.680233
DR0131 hypothetical proteinchromosome 1 CDS129577 1653 - 0.719903
DR0171 hypothetical proteinchromosome 1 CDS172577 693 - 0.619048
DR0180 RNA polymerase sigma-E factorchromosome 1 CDS180279 690 + 0.691304
DR0188 conserved hypothetical proteinchromosome 1 CDS191727 528 - 0.732955
DR0200 transcriptional regulator, Lrp/AsnC familychromosome 1 CDS203333 513 + 0.649123
DR0213 hypothetical proteinchromosome 1 CDS213798 918 - 0.718954
DR0233 transcriptional regulator, ArsR familychromosome 1 CDS231290 198 + 0.671717
DR0244 hypothetical proteinchromosome 1 CDS241049 459 - 0.701525
DR0259 conserved hypothetical proteinchromosome 1 CDS261169 507 - 0.684418
DR0265 histidine utilization repressor HutC, putativechromosome 1 CDS267723 765 - 0.643137
DR0335 ATP-dependent RNA helicase, putativechromosome 1 CDS331099 1437 + 0.718163
DR0353 ribonucleasechromosome 1 CDS352185 2283 - 0.660972
DR0357 conserved hypothetical proteinchromosome 1 CDS357818 576 - 0.708333
DR0374 conserved hypothetical proteinchromosome 1 CDS374541 303 + 0.679868
DR0378 transcriptional regulator, TetR familychromosome 1 CDS377018 642 - 0.658879
DR0432 DNA-binding response regulatorchromosome 1 CDS430655 645 + 0.64031
DR0448 hypothetical proteinchromosome 1 CDS443662 210 + 0.72381
DR0461 conserved hypothetical proteinchromosome 1 CDS456979 789 + 0.688213
DR0515 hypothetical proteinchromosome 1 CDS521319 417 - 0.678657
DR0534 serine/threonine protein kinase-related proteinchromosome 1 CDS536164 2103 - 0.600571
DR0559 fibronectin/fibrinogen-binding protein, putativechromosome 1 CDS564716 1584 - 0.704545
DR0608 hypothetical proteinchromosome 1 CDS620331 612 + 0.678105
DR0615 transcriptional regulator, LysR familychromosome 1 CDS626751 954 + 0.714885
DR0661 hypothetical proteinchromosome 1 CDS672543 255 + 0.592157
DR0675 hypothetical proteinchromosome 1 CDS685167 438 + 0.682648
DR0676 acetyltransferase, putativechromosome 1 CDS685601 459 + 0.651416
DR0677 acetyltransferase, putativechromosome 1 CDS685939 627 + 0.645933
DR0681 hypothetical proteinchromosome 1 CDS688880 483 + 0.666667
DR0682 hypothetical proteinchromosome 1 CDS689369 588 + 0.683673
DR0714 hypothetical proteinchromosome 1 CDS732142 801 - 0.735331
DR0719 conserved hypothetical proteinchromosome 1 CDS736318 1359 + 0.670346
DR0720 transcriptional regulator, TetR familychromosome 1 CDS737681 648 - 0.669753
DR0735 transcriptional regulator, TetR familychromosome 1 CDS749650 690 + 0.678261
DR0742 arginine repressor/activatorchromosome 1 CDS758472 516 + 0.631783
DR0743 response regulatorchromosome 1 CDS759073 678 - 0.623894
DR0781 response regulator, OmpR/PhoB familychromosome 1 CDS796758 669 + 0.623318
DR0797 hypothetical proteinchromosome 1 CDS811702 477 - 0.714885
DR0804 sigma factor, putativechromosome 1 CDS816594 849 - 0.720848
DR0815 transcriptional regulator, GntR familychromosome 1 CDS829593 804 - 0.700249
DR0823 ROK family proteinchromosome 1 CDS835370 840 + 0.677381
DR0840 regulatory protein MocR, putativechromosome 1 CDS852257 1434 - 0.723849
DR0891 DNA-binding response regulatorchromosome 1 CDS899143 585 - 0.688889
DR0907 cold shock protein, CSD familychromosome 1 CDS914327 402 + 0.579602
DR0911 DNA-directed RNA polymerase, beta` subunitchromosome 1 CDS918781 4641 - 0.648783
DR0912 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS923560 3540 - 0.64096
DR0934 transcriptional regulator, MerR familychromosome 1 CDS948832 774 + 0.643411
DR0987 DNA-binding response regulatorchromosome 1 CDS1005049 720 + 0.670833
DR0999 conserved hypothetical proteinchromosome 1 CDS1014206 678 + 0.696165
DR1003 transcriptional regulatorchromosome 1 CDS1017342 600 - 0.678333
DR1029 epoxidase, putativechromosome 1 CDS1041530 486 + 0.693416
DR1030 aminotransferase, putativechromosome 1 CDS1042129 1137 + 0.655233
DR1042 Pex-related proteinchromosome 1 CDS1055645 396 + 0.656566
DR1057 phosphinothricin acetyltransferase, putativechromosome 1 CDS1068135 1086 - 0.709024
DR1058 hypothetical proteinchromosome 1 CDS1069192 897 - 0.695652
DR1081 transcriptional regulator, TetR familychromosome 1 CDS1088466 702 - 0.717949
DR1111 transcriptional regulator, MerR familychromosome 1 CDS1118661 414 - 0.669082
DR1156 transcriptional regulatorchromosome 1 CDS1167114 804 - 0.692786
DR1159 transcriptional regulator, MarR familychromosome 1 CDS1170321 546 - 0.705128
DR1162 transcription elongation factorchromosome 1 CDS1172331 477 - 0.626834
DR1213 serine/threonine protein kinase, putativechromosome 1 CDS1220917 1053 + 0.68661
DR1217 transcriptional regulator, IclR familychromosome 1 CDS1224567 705 + 0.696454
DR1243 serine/threonine protein kinase, putativechromosome 1 CDS1249642 837 + 0.689367
DR1258 SNF2/Rad54 helicase-related proteinchromosome 1 CDS1262806 2751 + 0.70847
DR1259 DNA helicase, SNF2/RAD54 familychromosome 1 CDS1265444 1803 + 0.663894
DR1265 hypothetical proteinchromosome 1 CDS1272387 807 - 0.685254
DR1338 transcription termination factor Rhochromosome 1 CDS1345025 1281 + 0.661983
DR1379 transcriptional repressor, TetR familychromosome 1 CDS1386243 573 - 0.656195
DR1384 transcriptional regulator, TetR familychromosome 1 CDS1390186 591 - 0.654822
DR1396 conserved hypothetical proteinchromosome 1 CDS1400481 513 + 0.711501
DR1402 transcriptional repressor, TetR familychromosome 1 CDS1405067 627 - 0.655502
DR1473 phage shock protein Achromosome 1 CDS1485859 672 + 0.633929
DR1488 membrane-bound protein LytRchromosome 1 CDS1502439 1170 - 0.699145
DR1532 transcription-repair coupling factorchromosome 1 CDS1546521 3165 - 0.66793
DR1558 DNA-binding response regulatorchromosome 1 CDS1577133 678 + 0.669617
DR1579 conserved hypothetical proteinchromosome 1 CDS1599677 1359 + 0.685798
DR1588 aminotransferase, class I, putativechromosome 1 CDS1607434 1263 - 0.672209
DR1613 transcriptional regulator, ArsR familychromosome 1 CDS1634911 330 + 0.651515
DR1678 conserved hypothetical proteinchromosome 1 CDS1702732 435 - 0.648276
DR1683 transcriptional regulator, putativechromosome 1 CDS1706286 666 - 0.678679
DR1739 conserved hypothetical proteinchromosome 1 CDS1767513 318 - 0.698113
DR1787 mocR proteinchromosome 1 CDS1814915 1440 + 0.755556
DR1797 N-utilization substance protein Achromosome 1 CDS1825091 1206 + 0.637645
DR1798 conserved hypothetical proteinchromosome 1 CDS1826277 336 + 0.702381
DR1804 conserved hypothetical proteinchromosome 1 CDS1831051 390 + 0.646154
DR1838 GTP pyrophosphokinasechromosome 1 CDS1864478 2364 - 0.659475
DR1846 conserved hypothetical proteinchromosome 1 CDS1870891 315 - 0.68254
DR1851 serine/threonine-protein kinase-related proteinchromosome 1 CDS1874710 756 - 0.71164
DR1861 conserved hypothetical proteinchromosome 1 CDS1883839 549 - 0.710383
DR1884 transcriptional regulatorchromosome 1 CDS1904512 1158 - 0.675302
DR1894 transcriptional regulator, AsnC familychromosome 1 CDS1913643 588 - 0.636054
DR1905 transcriptional regulator, GntR familychromosome 1 CDS1923686 738 - 0.708672
DR1916 DNA helicase RecGchromosome 1 CDS1936853 2355 + 0.667516
DR1918 aminoglycoside acetyltransferase (6') type Ichromosome 1 CDS1940182 426 + 0.673709
DR1935 transcriptional regulatorchromosome 1 CDS1955346 1047 + 0.717287
DR1936 hypothetical proteinchromosome 1 CDS1956499 207 + 0.710145
DR1954 conserved hypothetical proteinchromosome 1 CDS1974797 324 - 0.654321
DR1969 conserved hypothetical proteinchromosome 1 CDS1989835 360 + 0.663889
DR1970 transcription elongation factorchromosome 1 CDS1990265 486 - 0.623457
DR1975 hypothetical proteinchromosome 1 CDS1996667 885 - 0.692655
DR2047 transcription antitermination protein NusGchromosome 1 CDS2060981 573 - 0.631763
DR2067 N-utilization substance protein Bchromosome 1 CDS2081689 579 - 0.702936
DR2079 conserved hypothetical proteinchromosome 1 CDS2092782 405 + 0.641975
DR2094 rrf2 proteinchromosome 1 CDS2105518 594 - 0.671717
DR2128 DNA-directed RNA polymerase, alpha subunitchromosome 1 CDS2131101 1026 + 0.649123
DR2148 transcriptional regulator, TetR familychromosome 1 CDS2149800 615 + 0.705691
DR2199 ATP-dependent DNA helicase RecG-related proteinchromosome 1 CDS2197666 1791 + 0.711893
DR2201 conserved hypothetical proteinchromosome 1 CDS2201595 468 + 0.679487
DR2245 phosphate regulon transcriptional regulatory protein PhoBchromosome 1 CDS2238511 717 - 0.723849
DR2254 hypothetical proteinchromosome 1 CDS2249641 900 - 0.676667
DR2255 hypothetical proteinchromosome 1 CDS2250537 903 - 0.687708
DR2259 transcriptional regulator, HTH_3 familychromosome 1 CDS2256083 249 - 0.634538
DR2281 hypothetical proteinchromosome 1 CDS2279715 495 + 0.682828
DR2287 transcriptional regulator, AsnC familychromosome 1 CDS2285094 291 + 0.608247
DR2296 glucokinasechromosome 1 CDS2293094 927 - 0.718447
DR2306 transcriptional regulator, MerR familychromosome 1 CDS2304184 468 - 0.65812
DR2312 carbohydrate kinase, PfkB familychromosome 1 CDS2311726 1152 - 0.732639
DR2327 response regulatorchromosome 1 CDS2325282 663 + 0.717949
DR2334 hypothetical proteinchromosome 1 CDS2332286 1161 + 0.67528
DR2341 birA bifunctional proteinchromosome 1 CDS2339068 1425 - 0.717895
DR2355 acetyltransferase, putativechromosome 1 CDS2353763 465 + 0.666667
DR2375 transcription elongation factorchromosome 1 CDS2376985 552 + 0.708333
DR2376 transcriptional regulator, TetR familychromosome 1 CDS2377631 594 + 0.638047
DR2396 transcriptional repressor, TetR familychromosome 1 CDS2399542 597 + 0.621441
DR2415 DNA-binding response regulatorchromosome 1 CDS2416984 711 + 0.66526
DR2418 DNA-binding response regulatorchromosome 1 CDS2421284 1122 + 0.68984
DR2432 conserved hypothetical proteinchromosome 1 CDS2434228 522 - 0.735632
DR2441 hypothetical proteinchromosome 1 CDS2441870 513 + 0.684211
DR2448 transcriptional regulator, MerR familychromosome 1 CDS2447808 843 + 0.67497
DR2454 transcriptional regulator, PbsX familychromosome 1 CDS2453067 195 - 0.584615
DR2472 conserved hypothetical proteinchromosome 1 CDS2467343 510 + 0.621569
DR2482 hypothetical proteinchromosome 1 CDS2479316 1470 + 0.637415
DR2494 conserved hypothetical proteinchromosome 1 CDS2493087 306 + 0.666667
DR2501 transcriptional regulator, sugar-binding, putativechromosome 1 CDS2499082 1080 - 0.72037
DR2519 transcriptional regulator, MerR familychromosome 1 CDS2522307 384 - 0.692708
DR2539 iron dependent repressor, putativechromosome 1 CDS2540977 699 + 0.742489
DR2574 transcriptional regulator, HTH_3 familychromosome 1 CDS2576656 396 - 0.643939
DR2581 LytR/CspA/Psr family proteinchromosome 1 CDS2588639 1317 - 0.679575
DR2629 conserved hypothetical proteinchromosome 1 CDS2640754 312 - 0.673077
DRA0002 chromosome partitioning protein, ParB familychromosome 2 CDS1432 882 + 0.585034
DRA0010 DNA-binding response regulatorchromosome 2 CDS9816 636 + 0.687107
DRA0019 hypothetical proteinchromosome 2 CDS20095 1071 + 0.704015
DRA0059 conserved hypothetical proteinchromosome 2 CDS63822 597 - 0.658291
DRA0062 acetyltransferase, putativechromosome 2 CDS67602 633 + 0.71564
DRA0071 transcriptional repressor SmtBchromosome 2 CDS76304 378 - 0.687831
DRA0078 hypothetical proteinchromosome 2 CDS83887 351 + 0.678063
DRA0128 hypothetical proteinchromosome 2 CDS126441 732 - 0.741803
DRA0142 transcriptional regulator, TetR familychromosome 2 CDS141523 675 - 0.619259
DRA0152 transcriptional regulator, IclR familychromosome 2 CDS153598 762 + 0.728346
DRA0211 transcriptional regulator, GntR familychromosome 2 CDS221435 840 + 0.735714
DRA0234 hypothetical proteinchromosome 2 CDS243966 174 - 0.655172
DRA0242 conserved hypothetical proteinchromosome 2 CDS253536 450 - 0.693333
DRA0248 transcriptional regulator, MarR familychromosome 2 CDS260445 537 - 0.66108
DRA0252 transcriptional regulator, MerR familychromosome 2 CDS265711 465 + 0.68172
DRA0308 transcriptional regulator, TetR familychromosome 2 CDS332989 720 - 0.670833
DRA0312 urease accessory protein UreGchromosome 2 CDS339633 642 - 0.669782
DRA0315 hydrogenase expression/formation HypB-related proteinchromosome 2 CDS341397 660 - 0.684848
DRA0332 protein kinase, putativechromosome 2 CDS360197 1575 + 0.697778
DRA0336 transcriptional regulator, HTH_1 familychromosome 2 CDS367818 951 - 0.695058
DRA0342 GGDEF family proteinchromosome 2 CDS374868 2583 + 0.606659
DRA0344 lexA repressorchromosome 2 CDS379160 663 - 0.707391
DRB0002 chromosome partitioning protein, ParB familyMP1 CDS1293 876 + 0.582192
DRB0030 chromosome partitioning protein, ParB familyMP1 CDS31161 912 - 0.594298
DRB0076 glycerol-3-phosphate regulon repressorMP1 CDS94837 819 + 0.683761
DRB0081 DNA-binding response regulatorMP1 CDS99585 630 - 0.698413
DRB0091 response regulatorMP1 CDS111390 660 - 0.709091
DRB0126 transcriptional regulator, TetR familyMP1 CDS147469 522 - 0.616858
DRB0136 ATP-dependent helicase HepAMP1 CDS162296 2826 + 0.694268
DRC0012 transcriptional regulator, GerE familyCP1 CDS12794 540 + 0.62963