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# Rickettsia conorii str. Malish 7, Malish 7

>RC0929 unknown
MQKVEDLARERGCNFIHLVTMDCQAKSFYEKLRYKIEFAMHGCEKDSIMY
YLRKNL
>RC0821 unknown
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQ
LGYINSSKGKGGGIKLAFNPSSMKLGDIIEKLEPNMDIVECFNKNTNSCR
ITNSCQFKHFIKEASEAFIKTLNNYTLEDAMITKTIQIKDKL
>RC0741 similarity to histon and other protein acetyltransferase
MSSVNISLATPDNITNILPLMAQLGYPSSSEELIARFKNFINREGYDVAL
ASLDNKIVGFIAWSKSLLFASDKTKIHIEALVIDENYRGKQIGKKLMEYL
EEIAKKYSLVIVDLTSGYRCAKDSTHIFYEVLGYHNSGEMAKLYLRKEL
>RC0426 similarity to (p)ppGpp 3-pyrophosphohydrolase
MKDIEYWEKNFESCKYSDQLIERLLFLNTQVKQPIDIREVQKGIYYARKY
HGAQMRQSGDPYYSHPIAVTIMVAEFVAKEVPKLFTFRMLQAALLHDTIE
DTELTEEIISNIFDEEVARHVAGLTRIKPWGKISSEKSLMLLIKQKRYDT
ALIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEILEIPSVSELI
YAECYKNNLKFNINSTFNKIINFDSFPFSQNKLLP
>RC0511 unknown
MHLEYKVTISENGRINIPAKIRDQLHLASGDQLMLILDKELTLIPLKNKI
KEFQALVKSRNKDNISLVDSLIESRRKEFNNE
>RC0183 unknown
MPVYDITSHLIKQKYKMIKASCELNQDMGKIYSLTPHPIRYNCLNYLKLL
SLPISLAFYITKLCFTANPSWTWIGVNILHEKMGQATAKKILHGLPDEVE
PDQNIPKIVEYVFRQYEENPTLTPIIEPTFIQKFLAKASNYIPALSRIVK
FWNEGGINYSDEIQTKRALIDVIYKHIIAKAYEVGKKGGKLEITDVTALF
PEINFEEKVNAASANLETEKVEVSNEESLISELPVRHLSKPVYREEFKRD
TEHSTADIREDASTGSTSKLPLEVKCGKMSIDQKHEEATITTNANNSINP
LVNLLMLKALHDAIRQEVLKTYVEHCLAEIQISKNQETLENFQYDDSLAK
LQLYGNYDNNDTYIFEQPVSYLGQTYEHLTAPIACY
>RC0601 unknown
MSKSARVVISSKQVVIPKYIRNKLGLHSGSELIINYKKNETLELLPINKD
IYSFFGKGKHKAKNGPVDVDEAISIAVIENDRN
>RC0732 unknown
MMLTTKGRYAVMAILEMASKSSTEPVTLNEMSVKQNISLNYLEQIFSKLK
KADLVKAIRGSKGGYILIGNLEEIKISDIMDAVNENFIMTTCYKKSVKTC
VPDTIKCNSHKLWQGLGKHIRDYFENISIKDALNSNLNI
>RC0789 unknown
MRCTHYSEWKEYHRIRAEQIFDTINVKYDSNHPTIMAENHYHFMLYKRVK
IVATAHIEFFNENELALRSLAVDRPYQNQGFGKYTMKLAVLNHYF
>RC1223 unknown
MPVFLITGFIKSKMENINHNSCNELKKLTEELENYMSDEAKINNKNTNQT
DKSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATT
FGVSVATLRNWEQGRRLPTGAAKLLLKIIEKEPNVVKRVLRG
>RC1195 unknown
MKLSRLFDPCNKAGNTRLCIYLSFIYSEVINMALATKVKEFLEEKLKQEK
IDRKYLAEVTNIPYTTVSRIMRAEANREFNPEIDTILKIAKYFNCTMDEV
IKRKVQNNS
>RC1099 similarity to (p)ppGpp 3-pyrophosphohydrolase
MLLYFHYTIEDTELTEKLIIEIFGKEIVKHVEGLTRIKPHGQISVEESLN
LLIKQKR
>RC1165 unknown
MSEDIRSKERFNRINDISETNKDDPEEIRNNFKKFVLNILETDNITPYKL
SEKTGTHETAWKNFLDGRTKMPDMGAIVALADYKNVPLDEVIGRDINKAK
KITVEIKQTPEISASIAKLPKDILQEAMLIGEKTRGFIHKPTNKKTKSFA
KQVKSSNKPKGRSI
>RC1039 similarity to mannose-1-phosphate guanylyltransferase
MKVDSLHNLSYKEEFEGDMKRSTAAYKKVSEDASIGSTYIADISEVGSQI
SGEPVQRIKIPEHRQILKRSLIKPVIMAGGNGKRLWPLASKDKPKQFKKI
LSDLTLLQQTLNRNKFLGQPTIITSKKYESITKEQATEIDVEIALITEPL
QKNTAVCAIITALSATALGFDIVVLLPSNHHIADDINYLNTINKALHYVN
ECGICTIFL
>RC0063 similarity to transcriptional regulator
MLFFYKPFLSEQIVGTLKSLLRRFKSVVQDNIIKFKNLNIDLNTEKVYKD
GLNIPLGPTEFKILQLFFQVPNEVFLRQEIIKYLWESEETFNERLIDVHI
NRIRDVLGKDNLIITTVRLSVVV
>RC1098 similarity to (p)ppGpp 3-pyrophosphohydrolase
MEDIKSWKEKFEICVYAKKLVDKLEYLNTKVKNPVDIEEVKTGIYYARKY
HGSQMRQSGDPYYSHPIEAAIILAKFVADEAPKLFTSNMINAALLPLYY
>RC0374 similarity to (p)ppGpp 3-pyrophosphohydrolase
MTFMEDLSSWKEKFETCVYAQKLLDNIEYLNAKVKNPVDIEEVKKGIYYA
RKYHDLQIRQLGDPYYSHPIEVAIMLAEFVAEDAPKLYNAIMLQAVLLHE
TIEDIALTEEVITIGPEVAKHVEGLTRIKPYGKISSEKGLNLLVRQKRYD
TVLIKFFDRMYNLQTLGAKSPEKMRRV
>RC1087 unknown
MQQNLYSEYMTNNKLTKKYYSASEVIKHLNIALHQLRYLETKNPDLSNYK
INNRKYYTANDIDLLQKSLNKDITSLSTARIDILLTNFHNLSLQITKILA
DSSMTCV
>RC0963 unknown
MNQNAFTEYVKELLEPYGSVVVRVMFGGYGIYKGGVMIGIIKSNELYFKS
DLSTYEYFQSFGSESFVYQSKGKLVTLKKSQAQFLRFPRSLQLQ
>RC0797 unknown
MTQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSS
KNIAEFLGSQIFEAISPGNGAKVNLIAPDDFNKSKAVDLQIYVKSEFFEN
YSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGARNKLFRTLENAFKEI
KYQNFENIMPASLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFD
NLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFADSLLAVSKIDL
SKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLI
DTMKKRQESLKEYGLEIKINSLISKKYSFPYYEVKEQGLKTLMKEYPDYF
AKILNYEERKKGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSL
NEDIKDERNLAGSSDKIKKEPKQKLVKTNIYANREYVDALEKFKKEVGTD
DIVSVTPSQLGLAKKAKQKDQDLLKLDEENLKHIKNLKEKIMKPTQTTVV
SVVNKKSTPAKTR
>RC0888 similarity to (p)ppGpp 3-pyrophosphohydrolase
MRQSGNPYYSHPIEIKIMLAEFVAEEAPKLYNIIMLQVQAALLHDTIEDT
ELTAEAITEIFGPEVAKHVEGLTRIKSYGKISRGESLNLLIKEKRYNTAL
IKLFDRIHNVQTLGVKSPEKARKIIEATLINFLLVAANINYKLEQELSYA
>RC0496 unknown
MNYSIKHPDKLASERLKERRLAVGRYYPKRIRASFFDISALQVKKYEEGL
SNIPISRLYVFAKVLNTPLKYFFNSSEEEKLKADNENTPNNKIEYLFKEI
ESDFLNNIAEAEGQYEHEVSFDYKELSRTMERALLSLTRAFTTNIRKIII
EHVRSVSIPCE
>RC0668 unknown
MGRKNDIIQKIDSFIGKKIYSLRLAKGLSRQQLAEVIDVTHQQLQKYEKA
INRISVGRLVLIAEALDRNIDYFFEGLEEANKPQPVHTQHQRMCIEVSRN
FMKINSTEEQQAVNNLVKCLAGKKN
>RC0030 unknown
MANTTQSEQKSEFKIGQRIVYPAHGVGEITNIEYHTIAGTEIKVYVISFS
QDKMTLKVPVSRAAVVGLRAVASRKDLDVIYSTLQGKPKQGNRMWSRRAQ
EYEGKINSGNIVAIAEVLRDLHKNVDNDRSYSERTLYESALNRLAGELAI
LENIHPTEAINKLVEVLREKLVA
>RC0043 unknown
MGDKIFHNLSGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLV
NHIDLKSFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLLLD
FHNDLAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELETNLWL
VMDCNKEFIFADNPESKWHNALKHLGIDEIHFSSQIGNA
>RC1021 cspA, cold shock-like protein
MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAVDAAGLHSLEEGQD
VIFDLEEKQGKAYAVNLRIK
>RC0101 czcR, transcriptional activator protein czcR
MRVLLIEGEPEMANLIELTLASEGIVCDKASVGVEGLRLGKVGGYDLVIL
DLMLPDINGFEILLRLRAAKIKTPILILSSLTDTYQKITGFSSGADDYLT
KPFVREELIARIKAIVRRSKGHAASVFRFDKVSINLDTRSVEVDGKKVHL
TNKEYAILELLILRRGTILTKEMFLNHLYSSVDEPEMKIIDVFICKLRKK
LSDAAGGRDYIDTVWGRGYMLKEYDELQQKEILAQGA
>RC1332 greA, transcription elongation factor EF
MTIFRQCQIIKKAYLTNFTITNILAEIYIIENSILKLLNLYNIIMNTKFP
ITAKGFEKLEHELKHLKHVERKKISADIAEAREHGDLSENAEYEAAREKQ
AFIEGRIKELEDMTARAEIIDIGKLSGDNIKFGATVTLIDDDTEEEVTYI
IVGEYEADITRKRVSIASPIAKALIGKSVGDFVEVTTPKGSKSYEVVTVE
YKELEL
>RC0913 mfd, transcription-repair coupling factor
MLQQKFPAAAKSFFAIDNFTKNLKQDFILSASNEEEALQLYKQALFFSSN
ENIYYFPSYNTIPYDHTSPNANILSRRAETLIKLTTNNSNSNKLLITHTA
NLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENSFTRNASSIDVGE
FAVRGEIIDIILSGPKAYRIHFSWGYIESIKEFDIDTQISTKSCRELIIS
PANEIVLNSETIGNFKNNYLRNFGVNHTDNALYEAVISGRKFTGYEQLLP
LFYDSCSNLIDYLNDPIFIFDNLSKKAILEFEHSYNDFYSARSEANKLKF
NSFYPTLSPTSLYFTASEITELLEQKNNILLTFENSEQASLIKNIAATSF
IEKKTVFDKLFEVIKANSHKKIIIGSSVLSSFERIKSIIQNYEYKYNEIN
KLDEAKASIINVAIIPLNQSFYTKEYLFITASELLEEKPSSTNTNKKLKN
ILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKPHDFLKILYAGNDKL
YIPVESIEVIKKYGNDNAELDKLGSVSWQRSKAKLKKRIKEIALHLIQIA
AKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLM
DRLICGDVGFGKTEVAMRAVFMVAKSLNEHLPQVAVVVPTTILCSQHFSR
FIERFKGFGLNIKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNI
KFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMT
GLKELSIIATPPLNRLEVHTSVMPYDPVIIRDALLREHFRGGRSFYVVPR
IKDIEDIAKQLKQIVPELSYKIAYGKMTPSKIDEVMSEFYAGKFDILVST
TIIESGIDIAEANTMIIHNADMLGLSQLYQLRGRIGRGKMRGYAYLTVAS
HKKMTSHSLRRLEIIQNSCALGSGFTIASRDMDLRGFGNLIGEEQSGQIK
EVGTELYQEMLEEQIAIFKDESIVSEQPFIPTINLGLSVFIPDNYVADAA
LKLGLYRRIGNLSNEIEVETFKDEMIDRFGLLPIEFNNLLDIVKIKLLCF
KLNIENLDSGDNGFVIKFYKNADMTDKILKFVTTYSNQAKIKPDNKLVYI
KKLVDKNIIVEANQLLWNLSEV
>RC0817 nusA, N utilization substance protein A
MSNIGNVEILQIIDSVAREKGISKEILISTVEQAVQAAGRKKYGNEYDIK
AQINRKTGEINLLRILKIVEDVEDYLTQISLEEALIKNPEAKIGDEIYEY
LPPIDHARVSAQAAKQVITQRVIEAEREKQYHDFKDRKGEIINGIVKRIE
YGDIIVDLSRAEAIIKKDQLIKGENFKPNDRIKAYVQDVRQETKGPQIFL
SRVDNQMLVKLFKLEVPEILESIIQIKSVARDPGSKAKIAVFAADSSIDP
VGSCVGIRGNRVKAVTNELNGEKIDIVLWSNDLAQFIVNALAPLAPGEIT
KILIDEDRHKVEVVVSQENQSIAIGRRGQNVRLASQLTGWNIDIMTEEQE
SKRRNEEFLTSTALFMEALDVEEVIGQLLSVTGFNSVEQIASSEISTLTR
IEGFEEELAVEIKNRAINYVDLKNEKIIKKLEDLGVEQELIDILELSLEL
ILQFAEYGIKTIEDLGEMSVNEFKNLAPNSNITDENIKLLIKTARQHGAL
KDS
>RC0204 nusB, N utilization substance protein B
MSSNKINKKSIARIAAVQAIYQNILQNNDDMDDIMQNVLSFYQNNNAITD
LPENLKISLSISHFKMLVKSVFENIHKLDEIIDNHLTNDKDPAHMPILLR
ALLRVSICELLFCPTTPAKVVINEYTDIANDMLNEHEIGFVNSVLDKIAK
EHTRLI
>RC0176 nusG, transcription antitermination protein NusG
MTAQSIDNILSSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTHFF
EDILIPVFGVSEVKRGKNVKVEKKLMPSYILIKMNMTDKSWHLVKNISGV
TGFLGSKTTPKALTESEIQNIFNNLEAEAKEAKNSKLYEVGEIVTVTDGP
FETFMGTVEEIDQEKNRLKVSVAIFGKATPIELNFNQVKKND
>RC0593 ompR, petR protein
MHTYKAHILIVDDDSRILALLKQFLNKNAFLVSTASSVIEAKNLLKTSNY
DLIILDVMLPEITGLDFATTIRDAGNNIPIVMLTALSEADDRVKGLEAGA
SDYITKPFEPRELLLRINNLINNYNNFTKETNIIKFGNNFYNSDTKEFTK
NNQIVSLSSTEQKLLEILIKNSGKSTSRFELSKIMGGLSMRSIDVQITRI
RSKIEDNPKEPKYLKTVRNEGYALYI
>RC0901 recG, ATP-dependent DNA helicase RecG [EC:3.6.1.-]
MLTILEKFLFSSVKTFINIREDTVSALKRLGIKNIRDLLFYLPVSYQNKI
LSPNLTEVRDGDIIQTEIVVESINLPKKSSQPLKITASNDTGSLLLVFFH
KPPPFIFNKLQVGTSHIISGKVQFFDHYLQIAHPEFIVNPKLAKEIEPIY
SLTYLLSNKQLYSYIIKAIEIFEEKCKSIEDKEVKDYLDIILQNLQMLHV
FHHCEEACMPTKQSSNVKLINSRLPQPLKGLHNDDLYTNAKKQLAAKELI
ANQISLLNVRTQISRRQGNIYPKAVSIQANILNELGFELTSYQKQVIEEI
ECDQSDKIEMMRLLQGDVGSGKTLVALLTMVNVVATGFQATLMAPTDLLA
NQHYEFFVKALKNTNIRVGLLTGKILGTARKNIMIQLDNDEIDILVGTHA
LFQEKVSFKKLGYIVIDEQHRFGVQQRLNLINKGVNPDVLVMTATPIPRS
LALTMFGDMTISKLMGKPKSRLPIATNTMSVNKIEHIIVAINKKLIAGER
VYWICPLIEQGEKETSEEDSLLMDVMNRFNSIDNIYQGYTGIIHGKMKNE
QKDQIMKQFKEGEIKILVATTVIEVGIDIPEATLIIIENAEQFGLAQLHQ
LRGRVGRGSLQSYCILLYNPKRLRKVARGRFEIMKQTNDGFYIAEQDLKL
RGSGEILGVKQSGEIAFFFANLADDYDLLLKAHKFAAIGSKGNVNFVNFQ
IKLFAKSQVSELV
>RC1020 rhlE, ATP-dependent RNA helicase RhlE
MDYIMKNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTG
SGKTLAYLLPLIDSFIKNKTTALILVPTRELATQIHSTLNKVTTSYKINS
AVLIGGEPMPKQFIQLKKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLD
EMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIAVSQKYLNNPV
RITVGATNKAAAEIKQESMHVSDKEKFSALTKQLGNREGSVIIFVKTKRS
ADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDVAAR
GLDIPHTQHVINYDLPMCPEDYLHRIGRTGRAGATGHALSFISPDDVIRW
RAIDRLVNKGESTPRSEFRSDKNNRKRSFGKRAGGDGKKFNAFDSSRKRT
FDGNSYGNKRKKVS
>RC0759 rho, transcription termination factor
MNTTNKESTAELNNTESNNNYNNFAENGNIINLKQLKRKLPEELQAQAEE
LKIENINSLLKQELVFAILKKSVEQGVLIVGEGVLEVLPDGFGFLRSPEV
NYLAGPDDIYISPSQIRRFGLRTGDTVEGQIRAPKAGERYFALLKVNRVN
FEDPSKAYHRVHFDNLTPLYPDEKLGLELENNSKDSKDFSTRVIELVAPM
GKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLLIDERPEEVTD
MQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGT
ALIETGSRMDEVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKE
DLLVDKIILNKMWVLRRIIDPMGSSEAIEFLLKKLENTKTNGEFFEMMKS
PERPKNGL
>RC0157 rnc, ribonuclease III [EC:3.1.26.3]
MESFEKLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGD
AVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII
MTHGEEVAGGRDNLNNIENATEALIAAIYLDSNIETTHDIIENLWAEFIK
VQNLTDYDPKTALQEWAQASDHHLPIYRLIKREGASHSSTFTVLVKVKDY
EQTGTGHTIKEAEKNAARSLLHRLKND
>RC0982 rpoA, DNA-directed RNA polymerase alpha chain [EC:2.7.7.6]
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRR
VLLSSLQGAAITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVA
EKRIMKLKATGPCVVTAGMIETGHDVEILNPDHVICDLAKDKQLEMELTC
KVGKGYVLSTNSYEDNLPIGEIAIDALFNPVKSVTYKVENTRVGQVTDYD
KLIMFVETNGDVLPEMAVGLAARILQEQLQLFISFEEQEEDKQVKTDTLP
FSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
>RC0181 rpoB, DNA-directed RNA polymerase beta chain [EC:2.7.7.6]
MVSLRDNIEAQPLSHNRRIRKNFGHINLVADIPNLIEIQKNSYEKNFLQL
NIKDSERKNKGLQSILNSIFPISDSSNIANLEFVKYEFDTPKYDVEECSQ
RSLSYAAPLKVTLRLSIWDIDEDTGTREIKGIKEQEVYMGDIPLMTKNGT
FIINGTERVVVSQMHRSPGVFFYHDEGKVHSSGKLLYSARVIPYRGSWLD
LEFDAKDVIYFRIDRKRKLYTTTLLRAIGMSTEEIIKFYYNSVTYKLVKN
KGWAVKFIPQHITAHRLTSDLVDADTGNILLKAGQKITPRLAKKYSGEGL
NNILVAHETLIGKYLSEDLRDPASDEVLAKIGEMITADMLNVINDLKIKN
VNVLVINPQSGPYIRNTLFADKNQDREAALCDIFRVLRPGEPANIEAAES
LFYNLFFDTERYDLSEVGRIKMNSRLELNISEEVTVLTIDDIKNIVRVLV
ELKDGKGIIDDIDHLGNRRVRSVGELIENQFRIGLVRMEKSVIERMSAGD
VDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSEITHKRRLSAL
GPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINK
HGFIESPYRRVKDGCVTDEVVYLSAIEEGKYKIGQANSKINKDGKLQGEF
INCRVEGGNFVMVEPYEVDFIDVTPMQVVSVAASLIPFLENDDANRALMG
SNMQRQAVPLIKTDAPFVGTGVEGVVAKDSGASVLALHDGIVEQVDSNRI
VIRTLEQKVDGSPSVDIYNLLKFQKSNHNTCINQKPLVKVGHYVKKNDII
ADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIVKEDVFTSIHI
EEFEVIARDTRLGPEEITRDIPNVSEEALRHLDEVGIIYIGAEVKAGDIL
VGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRV
FSRRGVEKDQRAIAIEKQQIEKFAKDRDDELEIIEHFVFSWLEKLLVGQV
IINGPKQVKVGQTITTEMLKGLSKGQFWQIIVEDANVMNEIEQIKTHYDE
KKEALDKRFATKVEKLQSGDDLPQGALKVVKVFIATKHKLQPGDKMAGRH
GNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIGQILETHLGWA
SINLAKKISTLVKEYKNKHIGIEQIKKFLIELYGENINSILERPEEEIIS
FCKKVSKGVHFATPVFDGAKVQDVKDMLKLAGQDPSGQVKLIDGRTGEYF
DRLVTVGQKYLLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFG
EMECWALQAYGAAYTLQEMLTVKSDDVNGRIKTYDSIVRGENNFESGIPE
SFNVMIKEFRSLCLNVKLEVTSS
>RC0182 rpoC, DNA-directed RNA polymerase beta prime chain [EC:2.7.7.6]
MSVVNFYGQLSNTQQFDQIRINIASPDQVRSWSFGEVTKPETINYRTFKP
EKDGLFCARIFGPVKDYECLCGKYKRMKNRGITCEKCGVEVTVSRVRRER
MGHIELAAPVAHIWFLKSLPSRISTLLDMTMRDVEKILYFENYVVVDPGL
SILQKGELLTEEELQKAKDKYGEDAFTASIGAEVIQQMLKELDFSKLKQE
LYEELQTTSSEVKKKKLVKRLKLVENFLESENKPEWMIMDVLPVIPPEIR
PLVMLDGGRFATSDLNELYRRVINRNNRLKKLIESKAPDIIVRNEKRMLQ
EAVDALFDNGRRGRAAKNANKRPFKSLSDMLKGKQGRFRQNLLGKRVDYS
GRSVIVVGPELKLHQCGLPKKMALELFKPFIYSKLELYGIATTIKAAKRM
VEAEKSEVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPLLIEGKAIQLH
PLVCAAFNADFDGDQMAVHIPLSIEAQLEARVFMMSTNNILSPANGRPII
VPDKDIVLGLYYLTLAFDNEVGAGMMFSDLAEMEHALYNKFITIHTKIKY
RRNQLNAEGKMVPVIIDTTYGRLMVGELLPSNPNIEFKCINKQLTKKDIS
LVIDLVYRHCGQKATVIFADQLMKLGFKYACSSGISFGMDDMVVPESKST
HINETQLEIKEFEQQYSNGLITYGEKYNKVVDAWSRCTDRVANDMMKEIA
TPPVNDAPNHQKINAIYMMAISGARGSFQQIKQLGGMRGLMTKSNGQIIQ
TPIISNFKEGLTEFECFNSANGMRKGQIDTALKTASSGYLTRKLVDVAQD
CIITEKDCGTDKGIEVKSVIEGGEVIVPLAEKILGRTAAIDIFHPVTNDL
ILNKGELINEAKLEQIESAGFDRIMIKSVLTCESTTGICSICYGRDLATG
TLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIGGAATKGAEVSSVDASYDA
KVKIISRNVVINSEERKIVMSRNCELLLLDNNGNEKARHKIPYGARLLVD
DGDMVIKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTDEATGI
PSKVIIESKQYSRGAELRPRIQLLDAKGEVITLSNGLEARYYLPVGAVLS
VEDGVQISVGDIIARIPKESTTTKDITGGLPRVAELVEARRPKDHAVIAE
IDGRVEFGKDYKSKRRIIIHPIDETMSIEYMVPKGKHVVVNEGDFVKKGD
LLIDGNPVLQDILKVMGVEVLANYIVNEVQAVYRLQGVKIDDKHIEVIIR
QMLQKVEVTDSGGTTLLVGEKIDRHEFDEINEKAMKNGLKPAEAQLILQG
ITKASLQTRSFISAASFQETTRVLTEAAIAGKVDKLRGLKENVIVGRLVP
AGTGYFMDKMRKAAAKLDEENV
>RC1329 rpoD, RNA polymerase sigma factor
MSNSNIDNDLDKIDSLLKKAKSKKIPVTYDDINNALPLNKNPSIRQLEEA
ILKFSDAGVDILESNEDDEIKLDIGMDEEFKLSTNVDNEPEDEVEEENIG
TTDDPVRLYLKDMGGVDLLTREHEVEIAKRIEEGHKTMIASLCRSPIAMR
CFIVWYEDLVNEKMLLRDLIDLEANMLHDETPENDEENSSETEGEEHEDN
HLSMSRVETQILPNIIERMKKIAFICEELLIEAKKCYEKSFEPKVLQNSK
KYNNLELLINEVSEIHFNSKRTEEILGKMYGINRDLINKETAFLKLAEKY
GVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWKELMTKESDYIDQMIAEL
SVIESKTGLLVNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKY
ANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIA
DQARTIRIPVHMIETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKV
RKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPIDAAIQSNLREV
TTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESK
ALRKLQHPIRSKKLNSFRSGGKRGDGNSSDLLEA
>RC0407 rpoH, RNA polymerase sigma-32 factor
MTNNINALAISSESGFYSYLQKINKIPSLTQEEELLLAKSYLEGNDLQAA
HKLVTSHLKLVAKIASGYRTYGLPITELVSEGNIGLMQAVKKFNPELGFR
LSTYAMWWIKAAIQEYILKSWSLVKMGTTAAQKKLFFSLNKVKHKITNLY
SRAITTDDFVQIADELGVSVNEVSEMNTRISGPDLSLNNSINSDDAESGE
LIELLPETRPTPEAMAINKQNSTSKRQLLSNAMKILNDRELRILTERKLT
DTPKTLDILSNEYNISKERIRQIENTAFEKIKKFILNHSREAA
>RC0882 rpoZ, DNA-directed RNA polymerase omega chain [EC:2.7.7.6]
MARITAEDCNKIIPDRFRLVVLATRYAKLLNYKVETNQIKKEKRDKPPVI
ALRRIAAGKVSVAQLEQDLINSLRTRTMIEPLVNQDESEAVEEKFEYLPE
VYIGEDYSDLDDQIFIDENGEDYETDK
>RC0087 spo0J, stage 0 sporulation protein J
MAKNKGLGRGLSSLLGEEVISIESEIVQIINIDKIRPNENQPRKNFEYDK
IKELADSILNNGLLQPIIVDNNFQIIAGERRWRACKLAKVLEIPVIIKNL
DARESMEIALIENIQRTDLTVMEEARGFKYLIENFNYTAEKLAERLGKSR
SHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINND
LNVRQTEELVRQWYKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALS
EKFGIKITIENYPLGGKLIFHYKDLEELDLILLKLN