Gene list
Applied filters:
COG category: Transcription
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
Number of genes found: 349
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| Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| STM0014 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 15014 | 948 | + | 0.406118 | |
| STM0017 | putative protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 17043 | 444 | - | 0.382883 | |
| STM0029 | putative transcription regulator | SubName: Full=Putative transcription regulator; | chromosome | CDS | 32545 | 450 | - | 0.371111 | |
| STM0030 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 33364 | 1005 | + | 0.38806 | |
| STM0031 | putative transcription regulator | SubName: Full=Putative transcription regulator; | chromosome | CDS | 34376 | 441 | - | 0.358277 | |
| STM0052 | putative transcription regulator sensor for citrate | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 61106 | 687 | - | 0.486172 | |
| STM0164 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 193404 | 768 | + | 0.550781 | |
| STM0333 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 376663 | 966 | + | 0.490683 | |
| STM0344 | putative response regulator | SubName: Full=Putative response regulator; | chromosome | CDS | 388783 | 744 | + | 0.408602 | |
| STM0347 | putative response regulator | SubName: Full=Putative response regulator; | chromosome | CDS | 391056 | 642 | + | 0.397196 | |
| STM0354 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 400860 | 465 | + | 0.544086 | |
| STM0363 | putative transcription regulator, AraC family | SubName: Full=Putative transcription regulator, AraC family; | chromosome | CDS | 411513 | 1005 | + | 0.5801 | |
| STM0410 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 465699 | 693 | + | 0.528139 | |
| STM0563 | putative transcriptional regulator (AraC/XylS family) | SubName: Full=Putative transcriptional regulator (AraC/XylS family); | chromosome | CDS | 619258 | 855 | - | 0.582456 | |
| STM0571 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | chromosome | CDS | 629330 | 2730 | + | 0.516117 | |
| STM0580 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 638146 | 582 | - | 0.527491 | |
| STM0581 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 639016 | 342 | + | 0.5 | |
| STM0652 | putative sigma-54 dependent transcriptional regulator | SubName: Full=Putative sigma-54 dependent transcriptional regulator; | chromosome | CDS | 714545 | 1929 | + | 0.500778 | |
| STM0692 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 755353 | 927 | - | 0.562028 | |
| STM0763 | transcriptional regulator, lysR family | SubName: Full=Transcriptional regulator, lysR family; | chromosome | CDS | 826492 | 852 | + | 0.352113 | |
| STM0764 | transcriptional regulator, lysR family | SubName: Full=Transcriptional regulator, lysR family; | chromosome | CDS | 827344 | 984 | - | 0.395325 | |
| STM0835 | putative Mn-dependent transcriptional regulator. | RecName: Full=Transcriptional regulator MntR; AltName: Full=Manganese transport regulator; | chromosome | CDS | 902271 | 474 | + | 0.529536 | |
| STM0859 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 932023 | 891 | - | 0.401796 | |
| STM0898 | predicted Fels-1 prophage transcriptional regulator | SubName: Full=Predicted Fels-1 prophage transcriptional regulator; | chromosome | CDS | 967911 | 696 | - | 0.425287 | |
| STM0898A | Fels-1 prophage protein | SubName: Full=Fels-1 prophage protein; | chromosome | CDS | 968719 | 255 | + | 0.482353 | |
| STM0900 | putative Fels-1 prophage DNA or RNA helicases of superfamily II | SubName: Full=Putative Fels-1 prophage DNA or RNA helicases of superfamily II; | chromosome | CDS | 969999 | 1584 | + | 0.52904 | |
| STM0952 | putative transcriptional regulator, lysR family | SubName: Full=Putative transcriptional regulator, lysR family; | chromosome | CDS | 1029345 | 912 | + | 0.578947 | |
| STM1001 | putative leucine response regulator | SubName: Full=Putative leucine response regulator; | chromosome | CDS | 1093080 | 462 | - | 0.489177 | |
| STM1012 | Gifsy-2 prophage putative regulatory protein | SubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage putative regulatory protein; | chromosome | CDS | 1105050 | 411 | - | 0.469586 | |
| STM1016 | Gifsy-2 prophage protein | SubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage protein; | chromosome | CDS | 1107990 | 348 | + | 0.543103 | |
| STM1082 | AraC family bacterial regulatory protein | SubName: Full=AraC family bacterial regulatory protein; | chromosome | CDS | 1172746 | 780 | + | 0.538462 | |
| STM1127 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1215275 | 882 | - | 0.492063 | |
| STM1243 | homology with cold shock proteins | RecName: Full=Cold shock-like protein CspH; | chromosome | CDS | 1330832 | 213 | - | 0.474178 | |
| STM1265 | putative response regulators | SubName: Full=Putative response regulators; | chromosome | CDS | 1347529 | 594 | + | 0.360269 | |
| STM1266 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1348191 | 849 | + | 0.462898 | |
| STM1541 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 1616470 | 792 | + | 0.47096 | |
| STM1547 | putative marR-family transcriptional regulator | SubName: Full=Putative marR-family transcriptional regulator; | chromosome | CDS | 1624193 | 489 | + | 0.486708 | |
| STM1555 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1632130 | 1008 | + | 0.539683 | |
| STM1575 | putative transcriptional regulator, TetR family | SubName: Full=Putative transcriptional regulator, TetR family; | chromosome | CDS | 1658415 | 579 | + | 0.571675 | |
| STM1618 | putative DeoR family transcriptional repressor of sgc operon | SubName: Full=Putative DeoR family transcriptional repressor of sgc operon; | chromosome | CDS | 1706567 | 792 | + | 0.518939 | |
| STM1619 | cryptic aminoglycoside resistance gene | RecName: Full=Aminoglycoside N(6)-acetyltransferase type 1; EC=2.3.1.82; AltName: Full=AAC(6)-I; AltName: Full=Aminoglycoside resistance protein; | chromosome | CDS | 1707358 | 438 | + | 0.518265 | |
| STM1664 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1757889 | 603 | - | 0.517413 | |
| STM1671 | putative bacterial regulatory helix-turn-helix proteins, araC family | SubName: Full=Putative bacterial regulatory helix-turn-helix protein, araC family; | chromosome | CDS | 1764396 | 858 | + | 0.38345 | |
| STM1674 | putative AraC family bacterial regulatory helix-turn-helix protein | SubName: Full=Putative AraC family bacterial regulatory helix-turn-helix protein; | chromosome | CDS | 1767332 | 591 | - | 0.573604 | |
| STM1677 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 1769947 | 906 | - | 0.547461 | |
| STM1857 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 1955007 | 420 | - | 0.428571 | |
| STM1873 | putative periplasmic or exported protein | SubName: Full=Putative periplasmic or exported protein; | chromosome | CDS | 1968296 | 354 | - | 0.533898 | |
| STM2180 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2276882 | 909 | + | 0.548955 | |
| STM2195 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2292287 | 390 | - | 0.515385 | |
| STM2230 | putative peptidase | SubName: Full=Putative peptidase; EC=3.4.21.-; | chromosome | CDS | 2330961 | 504 | - | 0.511905 | |
| STM2275 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 2379349 | 885 | + | 0.359322 | |
| STM2281 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2386536 | 879 | + | 0.480091 | |
| STM2345 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2457383 | 1020 | + | 0.556863 | |
| STM2361 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 2472873 | 1428 | + | 0.521008 | |
| STM2374 | putatiave helix-turn-helix regulatory protein | SubName: Full=Putatiave helix-turn-helix regulatory protein; | chromosome | CDS | 2486498 | 249 | + | 0.46988 | |
| STM2575 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2720726 | 927 | + | 0.429342 | |
| STM2624 | Gifsy-1 prophage protein | SubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage protein; | chromosome | CDS | 2766750 | 348 | - | 0.543103 | |
| STM2628 | Gifsy-1 prophage protein | SubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage putative regulatory protein; | chromosome | CDS | 2769627 | 411 | + | 0.469586 | |
| STM2727 | Fels-2 prophage protein | SubName: Full=Fels-2 prophage protein; | chromosome | CDS | 2869683 | 306 | - | 0.45098 | |
| STM2738 | Fels-2 prophage protein | SubName: Full=Fels-2 prophage protein; | chromosome | CDS | 2876179 | 633 | + | 0.4297 | |
| STM2744 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | chromosome | CDS | 2883250 | 216 | + | 0.555556 | |
| STM2748 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2888373 | 357 | - | 0.462185 | |
| STM2749 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | chromosome | CDS | 2888824 | 285 | + | 0.568421 | |
| STM2797 | putative arsR family regulatory protein | SubName: Full=Putative arsR family regulatory protein; | chromosome | CDS | 2946041 | 300 | + | 0.513333 | |
| STM2803 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 2949731 | 1335 | - | 0.566292 | |
| STM2905 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3047619 | 528 | + | 0.473485 | |
| STM2912 | putative LysR family transcriptional regulators | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3054575 | 933 | + | 0.550911 | |
| STM2920 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3062607 | 405 | - | 0.525926 | |
| STM2955 | putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain | SubName: Full=Putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; | chromosome | CDS | 3102440 | 357 | - | 0.456583 | |
| STM3012 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3171663 | 1023 | + | 0.57869 | |
| STM3020 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3180959 | 864 | - | 0.545139 | |
| STM3084 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 3247098 | 801 | - | 0.44819 | |
| STM3098 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3259128 | 687 | - | 0.572052 | |
| STM3121 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3279660 | 879 | + | 0.52446 | |
| STM3124 | putative response regulator | SubName: Full=Putative response regulator; | chromosome | CDS | 3284090 | 684 | + | 0.44883 | |
| STM3175 | putative bacterial regulatory helix-turn-helix proteins | SubName: Full=Putative bacterial regulatory helix-turn-helix protein; | chromosome | CDS | 3339316 | 867 | - | 0.580161 | |
| STM3262 | transcriptional regulator of sugar metabolism | SubName: Full=Transcriptional regulator of sugar metabolism; | chromosome | CDS | 3431469 | 774 | + | 0.503876 | |
| STM3357 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 3525275 | 666 | - | 0.496997 | |
| STM3358 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 3525927 | 630 | - | 0.490476 | |
| STM3533 | putative bacterial transcriptional regulator | SubName: Full=Putative bacterial transcriptional regulator; | chromosome | CDS | 3697979 | 756 | - | 0.505291 | |
| STM3547 | putative transcriptional regulator of sugar metabolism | SubName: Full=Putative transcriptional regulator of sugar metabolism; | chromosome | CDS | 3716370 | 1215 | + | 0.413992 | |
| STM3602 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 3774529 | 720 | - | 0.493056 | |
| STM3633 | putative bacterial regulatory proteins | SubName: Full=Putative bacterial regulatory protein; | chromosome | CDS | 3819242 | 1008 | + | 0.603175 | |
| STM3651 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3837736 | 486 | - | 0.489712 | |
| STM3653 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3838674 | 468 | - | 0.416667 | |
| STM3678 | putative bacterial regulatory helix-turn-helix proteins | SubName: Full=Putative bacterial regulatory helix-turn-helix protein; | chromosome | CDS | 3864821 | 816 | - | 0.544118 | |
| STM3681 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3869680 | 882 | + | 0.568027 | |
| STM3696 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3890132 | 1005 | - | 0.552239 | |
| STM3736 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3928434 | 903 | - | 0.527132 | |
| STM3773 | putative NtrC family transcriptional regulator | SubName: Full=Putative NtrC family transcriptional regulator; | chromosome | CDS | 3972549 | 2799 | - | 0.549125 | |
| STM3778 | putative helix-turn-helix protein | SubName: Full=Putative helix-turn-helix protein; | chromosome | CDS | 3979137 | 324 | + | 0.481481 | |
| STM3785 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 3984439 | 744 | - | 0.408602 | |
| STM3794 | putative deoR family regulatory protein | SubName: Full=Putative deoR family regulatory protein; | chromosome | CDS | 3994836 | 786 | + | 0.520356 | |
| STM3834 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 4037940 | 897 | + | 0.534002 | |
| STM4033 | putative merR family bacterial regulatory protein | SubName: Full=Putative merR family bacterial regulatory protein; | chromosome | CDS | 4241984 | 255 | + | 0.470588 | |
| STM4042A | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4252841 | 567 | + | 0.587302 | |
| STM4068 | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 4279021 | 723 | + | 0.510373 | |
| STM4270 | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 4509386 | 888 | - | 0.560811 | |
| STM4314 | putative luxR family bacterial regulatory proteins | SubName: Full=Putative luxR family bacterial regulatory proteins; | chromosome | CDS | 4560598 | 288 | - | 0.298611 | |
| STM4315 | putative AraC-type DNA-binding domain-containing protein | SubName: Full=Putative AraC-type DNA-binding domain-containing protein; | chromosome | CDS | 4560882 | 876 | - | 0.353881 | |
| STM4318 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4562850 | 492 | + | 0.571138 | |
| STM4320 | putative merR family bacterial regulatory protein | SubName: Full=Putative merR family bacterial regulatory protein; | chromosome | CDS | 4565999 | 333 | + | 0.477477 | |
| STM4417 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4658541 | 834 | + | 0.482014 | |
| STM4423 | putative AraC-type DNA-binding domain-containing protein | SubName: Full=Putative AraC-type DNA-binding domain-containing protein; | chromosome | CDS | 4665886 | 825 | + | 0.441212 | |
| STM4440 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | chromosome | CDS | 4683942 | 339 | + | 0.548673 | |
| STM4448 | putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | SubName: Full=Putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); | chromosome | CDS | 4689457 | 1914 | + | 0.541275 | |
| STM4463 | putative arginine repressor | RecName: Full=Arginine repressor; | chromosome | CDS | 4705132 | 489 | - | 0.478528 | |
| STM4497 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | chromosome | CDS | 4750638 | 603 | - | 0.497512 | |
| STM4534 | putative NtrC family transcriptional regulator, ATPase domain | SubName: Full=Putative NtrC family transcriptional regulator, ATPase domain protein; | chromosome | CDS | 4792067 | 2766 | + | 0.547722 | |
| acrR | acrAB operon repressor (TetR/AcrR family) | SubName: Full=AcrAB operon repressor (TetR/AcrR family); | chromosome | CDS | 533754 | 654 | + | 0.46789 | |
| adiY | transcriptional activator of adiA | SubName: Full=Transcriptional activator of adiA; | chromosome | CDS | 4537638 | 762 | - | 0.434383 | |
| agaR | aga operon transcriptional repressor | SubName: Full=Aga operon transcriptional repressor; | chromosome | CDS | 3421438 | 834 | - | 0.517986 | |
| allR | putative regulatory protein | RecName: Full=HTH-type transcriptional repressor AllR; AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons; | chromosome | CDS | 576564 | 819 | + | 0.549451 | |
| araC | transcriptional regulator (AraC/XylS family) for ara operon | RecName: Full=Arabinose operon regulatory protein; | chromosome | CDS | 121640 | 846 | + | 0.539007 | |
| arcA | response regulator (OmpR family) in two-component regulatory system with ArcB (or CpxA) | SubName: Full=Response regulator (OmpR family) in two-component regulatory system with ArcB (Or CpxA); | chromosome | CDS | 4855370 | 717 | - | 0.524407 | |
| argR | repressor of arg regulon | RecName: Full=Arginine repressor; | chromosome | CDS | 3528028 | 471 | + | 0.496815 | |
| asnC | transcriptional regulator for asnA, gidA | SubName: Full=Transcriptional regulator for asnA, gidA; | chromosome | CDS | 4084699 | 459 | - | 0.507625 | |
| baeR | response regulator in two-component regulatory system with BaeS | SubName: Full=Response regulator in two-component regulatory system with BaeS; | chromosome | CDS | 2224537 | 723 | + | 0.538036 | |
| basR | response regulator in two-component regulatory system with BasS | RecName: Full=Transcriptional regulatory protein BasR; | chromosome | CDS | 4533719 | 669 | - | 0.539611 | |
| bglJ | transcriptional regulator (activator) of bgl operon | SubName: Full=Transcriptional regulator (Activator) of bgl operon; | chromosome | CDS | 4806803 | 675 | + | 0.49037 | |
| cadC | transcriptional activator of cad operon | SubName: Full=Transcriptional activator of cad operon; | chromosome | CDS | 2696631 | 1545 | + | 0.476375 | |
| cdaR | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | chromosome | CDS | 246072 | 1158 | + | 0.556995 | |
| celD | transcriptional repressor of cel operon | SubName: Full=Transcriptional repressor of cel operon; | chromosome | CDS | 1393977 | 843 | + | 0.430605 | |
| cobB | putative nicotinate-nucleotide dimethylbenzimidazolephosphoribosltransferase | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1306775 | 822 | + | 0.529197 | |
| copR | Copper resistance transcriptional regulatory protein | SubName: Full=Copper resistance transcriptional regulatory protein; | chromosome | CDS | 1183637 | 747 | - | 0.500669 | |
| cpxR | response reguator in two-component regulatory system with CpxA | SubName: Full=Response reguator in two-component regulatory system with CpxA; | chromosome | CDS | 4269746 | 699 | - | 0.546495 | |
| creB | response regulator in two-component regulatory system with CreC | SubName: Full=Response regulator in two-component regulatory system with CreC; | chromosome | CDS | 4844233 | 690 | + | 0.581159 | |
| csgD | putative transcriptional regulator | RecName: Full=Probable csgAB operon transcriptional regulatory protein; | chromosome | CDS | 1229728 | 651 | - | 0.407066 | |
| csiE | stationary phase inducible protein | SubName: Full=Stationary phase inducible protein; | chromosome | CDS | 2691074 | 1278 | + | 0.549296 | |
| cspA | major cold shock protein 7.4 | RecName: Full=Cold shock protein CspA; Short=CSP-A; AltName: Full=7.4 kDa cold shock protein; AltName: Full=CS7.4; | chromosome | CDS | 3836439 | 213 | + | 0.474178 | |
| cspB | putative cold-shock protein | RecName: Full=Cold shock-like protein CspJ; | chromosome | CDS | 2079225 | 213 | - | 0.41784 | |
| cspC | cold shock protein | RecName: Full=Cold shock-like protein CspC; Short=CSP-C; | chromosome | CDS | 1935547 | 210 | - | 0.471429 | |
| cspD | similar to CspA but not cold shock induced | SubName: Full=CspA-like protein but not cold shock induced; | chromosome | CDS | 1021802 | 222 | - | 0.518018 | |
| cspE | RNA chaperone, negative regulator of cspA transcription | SubName: Full=RNA chaperone, negative regulator of cspA transcription; | chromosome | CDS | 692915 | 210 | + | 0.438095 | |
| cueR | putative heavy metal transcriptional repressor (MerR family) | RecName: Full=HTH-type transcriptional regulator CueR; AltName: Full=Copper efflux regulator; AltName: Full=Copper export regulator; | chromosome | CDS | 560556 | 417 | + | 0.522782 | |
| cysB | transcriptional regulator for cysteine regulon | RecName: Full=HTH-type transcriptional regulator CysB; AltName: Full=Cys regulon transcriptional activator; | chromosome | CDS | 1808407 | 975 | - | 0.518974 | |
| cytR | GalR/LacI family transcriptional repressor | SubName: Full=GalR/LacI family transcriptional repressor; | chromosome | CDS | 4302181 | 1026 | - | 0.534113 | |
| dbpA | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 1748288 | 1374 | - | 0.55313 | |
| dcuR | response regulator in two-component regulatory system with DcuS | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4549177 | 720 | - | 0.4875 | |
| deaD | cysteine sulfinate desulfinase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3446185 | 1941 | - | 0.579083 | |
| deoR | transcriptional repressor for deoxyribose operon (DeoR family) | SubName: Full=Transcriptional repressor for deoxyribose operon (DeoR family); | chromosome | CDS | 936744 | 759 | - | 0.519104 | |
| dgoR | galactonate operon transcriptional repressor | SubName: Full=Galactonate operon transcriptional repressor; | chromosome | CDS | 4033255 | 690 | - | 0.536232 | |
| dinG | LexA regulated (SOS) repair enzyme | RecName: Full=Probable ATP-dependent helicase DinG; EC=3.6.4.12; AltName: Full=DNA-damage-inducible protein G; | chromosome | CDS | 887158 | 2145 | + | 0.549184 | |
| dpiA | response regulator in two-component regulatory system with DpiB | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 689657 | 681 | + | 0.537445 | |
| dsdC | LysR family transcriptional activator | SubName: Full=LysR family transcriptional activator; | chromosome | CDS | 4001949 | 924 | - | 0.530303 | |
| ecnR | putative luxR family bacterial regulatory protein | SubName: Full=Putative luxR family bacterial regulatory protein; | chromosome | CDS | 4580656 | 588 | - | 0.465986 | |
| emrR | transcriptional repressor of emrAB operon | SubName: Full=Transcriptional repressor of emrAB operon; | chromosome | CDS | 2961121 | 531 | + | 0.487759 | |
| envR | transcriptional repressor for envCD (acrEF) | SubName: Full=Transcriptional repressor for envCD (AcrEF); | chromosome | CDS | 3560028 | 663 | - | 0.432881 | |
| eutR | putative regulator ethanolamine operon | RecName: Full=HTH-type transcriptional regulator EutR; AltName: Full=Ethanolamine operon regulatory protein; | chromosome | CDS | 2564060 | 1053 | - | 0.54321 | |
| fadR | negative regulator of fad regulon | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 1905889 | 720 | - | 0.525 | |
| fimW | putative fimbrial protein | RecName: Full=Fimbriae W protein; | chromosome | CDS | 612706 | 597 | - | 0.420436 | |
| fimZ | fimbrial protein Z | RecName: Full=Fimbriae Z protein; | chromosome | CDS | 610256 | 633 | - | 0.410742 | |
| fis | site-specific DNA inversion stimulation factor | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 3556262 | 297 | + | 0.464646 | |
| flgM | anti-FliA factor | RecName: Full=Negative regulator of flagellin synthesis; AltName: Full=Anti-sigma-28 factor; | chromosome | CDS | 1257046 | 294 | - | 0.517007 | |
| fliA | sigma F (sigma 28) factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 2044747 | 720 | - | 0.547222 | |
| fruR | transcriptional repressor of fru operon and others | RecName: Full=Catabolite repressor/activator; AltName: Full=Fructose repressor; | chromosome | CDS | 138337 | 1005 | + | 0.564179 | |
| fucR | positive regulator of the fuc operon | SubName: Full=Positive regulator of the fuc operon; | chromosome | CDS | 3131996 | 711 | + | 0.49789 | |
| galR | transcriptional repressor of galETK operon | RecName: Full=HTH-type transcriptional regulator galR; AltName: Full=Galactose operon repressor; | chromosome | CDS | 3170624 | 1029 | + | 0.558795 | |
| galS | GalR/LacI family transcriptional repressor of mgl operon | RecName: Full=HTH-type transcriptional regulator GalS; AltName: Full=Mgl repressor and galactose ultrainduction factor; | chromosome | CDS | 2288115 | 1023 | - | 0.557185 | |
| gcvA | regulator of gcv operon | SubName: Full=Regulator of gcv operon; | chromosome | CDS | 3134272 | 918 | - | 0.509804 | |
| glpR | transcriptional repressor of the glp operon | SubName: Full=Transcriptional repressor of the glp operon; | chromosome | CDS | 3686448 | 759 | - | 0.538867 | |
| gntR | transcriptional repressor gnt-I | SubName: Full=Transcriptional repressor gnt-I; | chromosome | CDS | 3712167 | 996 | - | 0.573293 | |
| greA | transcription elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3467930 | 477 | - | 0.513627 | |
| greB | transcription elongation factor and transcript cleavage | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 3660551 | 474 | + | 0.514768 | |
| gutM | putative glucitol (srl) operon regulatory protein | SubName: Full=Putative glucitol (Srl) operon regulatory protein; | chromosome | CDS | 2981080 | 360 | + | 0.55 | |
| hepA | RNA polymerase associated protein | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 110002 | 2907 | - | 0.570003 | |
| hilA | invasion genes transcription activator | RecName: Full=Transcriptional regulator HilA; Short=Protein IagA; | chromosome | CDS | 3019856 | 1662 | + | 0.431408 | |
| hilC | araC family bacterial regulatory helix-turn-helix protein | RecName: Full=Transcriptional regulator sirC; | chromosome | CDS | 3012107 | 888 | - | 0.370495 | |
| hilD | regulatory helix-turn-helix proteins, araC family | RecName: Full=Transcriptional regulator hilD; | chromosome | CDS | 3017836 | 930 | + | 0.409677 | |
| hpaA | 4-hydroxyphenylacetate catabolism protein | SubName: Full=4-hydroxyphenylacetate catabolism protein; | chromosome | CDS | 1195422 | 897 | + | 0.520624 | |
| hpaR | 4-hydroxyphenylacetate catabolism protein | SubName: Full=4-hydroxyphenylacetate catabolism protein; | chromosome | CDS | 1187506 | 441 | - | 0.521542 | |
| hutC | histidine utilization repressor | SubName: Full=Histidine utilization repressor; | chromosome | CDS | 854047 | 726 | + | 0.568871 | |
| hypB | hydrogenase-3 accessory protein | SubName: Full=Hydrogenase-3 accessory protein; | chromosome | CDS | 3000223 | 873 | + | 0.573883 | |
| iciA | inhibitor of replication initiation | RecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; | chromosome | CDS | 3225590 | 894 | + | 0.579418 | |
| iclR | acetate operon transcriptional repressor | RecName: Full=Acetate operon repressor; | chromosome | CDS | 4407211 | 825 | - | 0.58303 | |
| idnR | L-idonate regulator | SubName: Full=L-idonate regulator; | chromosome | CDS | 4724731 | 999 | - | 0.503504 | |
| ilvY | positive LysR family regulator for ilvC | RecName: Full=HTH-type transcriptional activator IlvY; | chromosome | CDS | 4116326 | 888 | - | 0.601351 | |
| invF | invasion protein | RecName: Full=Invasion protein InvF; AltName: Full=Transcriptional regulator InvF; | chromosome | CDS | 3043282 | 651 | - | 0.459293 | |
| kdgR | putative IclR family transcriptional repressor | SubName: Full=Putative IclR family transcriptional repressor; | chromosome | CDS | 1937671 | 792 | - | 0.494949 | |
| kdpE | response regulator in two-component regulatory system with KdpD | SubName: Full=Response regulator in two-component regulatory system with KdpD; | chromosome | CDS | 766339 | 678 | - | 0.563422 | |
| leuO | putative LysR family transcriptional regulator | RecName: Full=Probable HTH-type transcriptional regulator LeuO; | chromosome | CDS | 134569 | 945 | + | 0.480423 | |
| lexA | SOS response regulator | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 4459249 | 609 | + | 0.550082 | |
| lldR | putative transcriptional GntR family regulator for lct operon | SubName: Full=Putative transcriptional GntR family regulator for lct operon; | chromosome | CDS | 3887564 | 777 | + | 0.574003 | |
| lrhA | LysR family NADH dehydrogenase transcriptional repressor | SubName: Full=LysR family NADH dehydrogenase transcriptional repressor; | chromosome | CDS | 2440125 | 939 | - | 0.529287 | |
| lrp | regulator for lrp regulon and high-affinity branched-chain amino acid transport system | RecName: Full=Leucine-responsive regulatory protein; | chromosome | CDS | 1036742 | 495 | + | 0.490909 | |
| lysR | positive LysR family transcriptional regulator | SubName: Full=Positive LysR family transcriptional regulator; | chromosome | CDS | 3174075 | 936 | + | 0.58547 | |
| malT | transcriptional activator of the mal genes | RecName: Full=HTH-type transcriptional regulator MalT; AltName: Full=ATP-dependent transcriptional activator MalT; | chromosome | CDS | 3676900 | 2706 | + | 0.554693 | |
| marA | AraC/XylS family transcriptional activator of defense systems | RecName: Full=Multiple antibiotic resistance protein MarA; | chromosome | CDS | 1597094 | 435 | - | 0.455172 | |
| marR | transcriptional repressor of marRAB operon | RecName: Full=Multiple antibiotic resistance protein MarR; | chromosome | CDS | 1597497 | 435 | - | 0.482759 | |
| melR | regulator of melibiose operon | SubName: Full=Regulator of melibiose operon; | chromosome | CDS | 4541197 | 933 | - | 0.523044 | |
| metJ | transcriptional repressor of all met genes but metF | RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; | chromosome | CDS | 4309131 | 318 | - | 0.515723 | |
| metR | regulator for metE and metH | RecName: Full=HTH-type transcriptional regulator MetR; | chromosome | CDS | 4168560 | 954 | - | 0.584906 | |
| mfd | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1298895 | 3447 | - | 0.570641 | |
| mlc | transcriptional repressor of ptsG and ptsHI | SubName: Full=Transcriptional repressor of ptsG and ptsHI; | chromosome | CDS | 1565101 | 1221 | + | 0.519247 | |
| mtlR | repressor for mtl | SubName: Full=Repressor for mtl; | chromosome | CDS | 3878549 | 591 | + | 0.534687 | |
| nagC | transcriptional repressor of nag (N-acetylglucosamine) operon (NagC/XylR family) | SubName: Full=Transcriptional repressor of nag (N-acetylglucosamine) operon (NagC/XylR family); | chromosome | CDS | 741692 | 1221 | - | 0.533989 | |
| nanK | putative ManNAc kinase | RecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; | chromosome | CDS | 3504905 | 876 | - | 0.597032 | |
| narL | response regulator in two-component regulatory system with NarX (or NarQ) | SubName: Full=Response regulator in two-component regulatory system with NarX (Or NarQ); | chromosome | CDS | 1866071 | 651 | + | 0.537634 | |
| narP | response regulator in two-component regulatory system with NarQ (or NarX) | SubName: Full=Response regulator in two-component regulatory system with NarQ (Or NarX); | chromosome | CDS | 2346702 | 648 | + | 0.526235 | |
| nhaR | transcriptional activator of nhaA | SubName: Full=Transcriptional activator of nhaA; | chromosome | CDS | 47418 | 900 | + | 0.505556 | |
| nikR | nickel-responsive transcriptional regulator | RecName: Full=Nickel-responsive regulator; | chromosome | CDS | 3751343 | 402 | + | 0.549751 | |
| nlp | regulatory factor of maltose metabolism | SubName: Full=Regulatory factor of maltose metabolism; | chromosome | CDS | 3474550 | 288 | + | 0.493056 | |
| nusA | L factor | RecName: Full=Transcription termination/antitermination protein NusA; | chromosome | CDS | 3456313 | 1503 | - | 0.525615 | |
| nusB | transcription termination; L factor | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 471527 | 420 | + | 0.528571 | |
| nusG | component in transcription antitermination | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 4362402 | 546 | + | 0.543956 | |
| ompR | response regulator in two-component regulatory system with EnvZ | RecName: Full=Transcriptional regulatory protein OmpR; | chromosome | CDS | 3659606 | 720 | - | 0.556944 | |
| orf242 | putative regulatory proteins, merR family | SubName: Full=Putative regulatory proteins, merR family; | chromosome | CDS | 1475260 | 729 | - | 0.539095 | |
| orf408 | putative regulatory protein, deoR family | SubName: Full=Putative regulatory protein, deoR family; | chromosome | CDS | 1464806 | 1227 | - | 0.458028 | |
| oxyR | regulatory protein sensor for oxidative stress | SubName: Full=Regulatory protein sensor for oxidative stress; | chromosome | CDS | 4343080 | 918 | + | 0.565359 | |
| pdhR | transcriptional repressor for pyruvate dehydrogenase complex (GntR family) | RecName: Full=Pyruvate dehydrogenase complex repressor; | chromosome | CDS | 175316 | 765 | + | 0.564706 | |
| pduD | propanediol utilization dehydratase, medium subunit | RecName: Full=Propanediol dehydratase medium subunit; EC=4.2.1.28; AltName: Full=Propanediol utilization protein PduD; | chromosome | CDS | 2119633 | 675 | + | 0.57037 | |
| phnO | putative regulator in phn operon | SubName: Full=Putative regulator in phn operon; | chromosome | CDS | 4529018 | 465 | - | 0.494624 | |
| phnR | 2-aminoethylphosphonate transport, repressor | RecName: Full=Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons; | chromosome | CDS | 483349 | 720 | - | 0.590278 | |
| phoB | response regulator in two-component regulatory system with PhoR (or CreC) | SubName: Full=Response regulator in two-component regulatory system with PhoR (Or CreC); | chromosome | CDS | 450795 | 690 | + | 0.546377 | |
| phoP | response regulator in two-component regulatory system with PhoQ | RecName: Full=Virulence transcriptional regulatory protein PhoP; AltName: Full=Acid shock protein 29; Short=ASP29; | chromosome | CDS | 1318689 | 675 | - | 0.517037 | |
| pocR | propanediol utilization protein | RecName: Full=Regulatory protein PocR; | chromosome | CDS | 2114399 | 912 | - | 0.45943 | |
| prpR | regulator for prp operon (EBP family) | RecName: Full=Propionate catabolism operon regulatory protein; | chromosome | CDS | 416087 | 1626 | - | 0.557196 | |
| pspA | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1781747 | 669 | - | 0.515695 | |
| pspC | phage shock protein | SubName: Full=Phage shock protein; | chromosome | CDS | 1781104 | 360 | - | 0.522222 | |
| pspF | transcription activator | SubName: Full=Transcription activator; | chromosome | CDS | 1782586 | 981 | + | 0.543323 | |
| ptsJ | putative gntR family regulatory protein | RecName: Full=Putative transcriptional regulatory protein PtsJ; | chromosome | CDS | 2548503 | 1293 | + | 0.589327 | |
| purR | transcriptional repressor for pur regulon, glyA, glnB, prsA, speA (GalR/LacI family) | RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; | chromosome | CDS | 1507920 | 1026 | - | 0.545809 | |
| rbsR | transcriptional repressor for rbs operon (GalR/LacI family) | SubName: Full=Transcriptional repressor for rbs operon (GalR/LacI family); | chromosome | CDS | 4096544 | 999 | + | 0.533534 | |
| rcsA | positive transcriptional regulator of capsular/exo-polysaccharide synthesis (LuxR/UhpA family) | RecName: Full=Transcriptional regulatory protein RcsA; | chromosome | CDS | 2067427 | 624 | + | 0.387821 | |
| rcsB | LuxR/UhpA family response regulator in two-component regulatory system with RcsC | RecName: Full=Transcriptional regulatory protein RcsB; | chromosome | CDS | 2369994 | 651 | + | 0.490015 | |
| recG | DNA helicase | SubName: Full=DNA helicase; EC=3.6.1.-; | chromosome | CDS | 3936881 | 2082 | + | 0.585014 | |
| relA | (p)ppGpp synthetase I | SubName: Full=(P)ppGpp synthetase I; EC=2.7.6.5; | chromosome | CDS | 3102880 | 2235 | - | 0.555705 | |
| rfaH | transcriptional activator | SubName: Full=88% identity to E. coli transcriptional activator RFAH (SW:P26614); SubName: Full=Transcriptional activator; | chromosome | CDS | 4182924 | 489 | - | 0.492843 | |
| rhaR | positive regulator for rhaRS operon | RecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; | chromosome | CDS | 4260054 | 849 | + | 0.497055 | |
| rhaS | positive regulator for rhaBAD operon | RecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; | chromosome | CDS | 4259065 | 837 | + | 0.537634 | |
| rhlB | putative helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4123427 | 1266 | - | 0.547393 | |
| rhlE | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 885586 | 1365 | + | 0.58315 | |
| rho | transcription termination factor Rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 4125584 | 1260 | + | 0.528571 | |
| rnb | RNase II | RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; | chromosome | CDS | 1794346 | 1935 | + | 0.556072 | |
| rnc | RNase III, ds RNA | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 2724827 | 681 | - | 0.528634 | |
| rnk | regulator of nucleoside diphosphate kinase | RecName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 679344 | 411 | - | 0.583942 | |
| rob | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4842666 | 870 | - | 0.54023 | |
| rof | modulator of Rho-dependent transcription termination | SubName: Full=Modulator of Rho-dependent transcription termination; | chromosome | CDS | 280047 | 261 | - | 0.43295 | |
| rpoA | RNA polymerase, alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 3583301 | 990 | - | 0.521212 | |
| rpoB | RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 4365908 | 4029 | + | 0.54207 | |
| rpoC | RNA polymerase, beta prime subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 4370013 | 4224 | + | 0.546875 | |
| rpoD | sigma D factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 3376266 | 1983 | + | 0.525971 | |
| rpoE | sigma E (sigma 24 ) factor of RNA polymerase | RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA polymerase sigma-E factor; AltName: Full=Sigma-24; | chromosome | CDS | 2779428 | 576 | - | 0.508681 | |
| rpoH | sigma H factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 3735927 | 855 | - | 0.538012 | |
| rpoN | sigma N factor of RNA polymerase | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 3484410 | 1434 | + | 0.540446 | |
| rpoS | sigma S (sigma 38) factor of RNA polymerase | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 3065494 | 993 | - | 0.524673 | |
| rpoZ | RNA polymerase, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 3933776 | 276 | + | 0.536232 | |
| rsd | regulator of sigma D | RecName: Full=Regulator of sigma D; | chromosome | CDS | 4382750 | 489 | - | 0.496933 | |
| rstA | response regulator in two-component regulatory system with RstB (OmpR family) | SubName: Full=Response regulator in two-component regulatory system with RstB (OmpR family); | chromosome | CDS | 1551289 | 732 | - | 0.531421 | |
| rtcR | sigma N (sigma 54)-dependent regulator of rtcBA expression | SubName: Full=Sigma N (Sigma 54)-dependent regulator of rtcBA expression; | chromosome | CDS | 3684868 | 1584 | + | 0.601641 | |
| sdiA | transcriptional regulator of ftsQAZ gene cluster | SubName: Full=Transcriptional regulator of ftsQAZ gene cluster; | chromosome | CDS | 2039658 | 723 | - | 0.49101 | |
| sinR | transcriptional regulator | RecName: Full=Probable HTH-type transcriptional regulator SinR; | chromosome | CDS | 348610 | 948 | + | 0.397679 | |
| slyA | MarR family transcriptional regulator for hemolysin | RecName: Full=Transcriptional regulator SlyA; AltName: Full=Cytolysin SlyA; AltName: Full=Salmolysin; | chromosome | CDS | 1519880 | 441 | + | 0.485261 | |
| soxR | redox-sensing transcriptional activator SoxR | RecName: Full=Redox-sensitive transcriptional activator SoxR; | chromosome | CDS | 4504380 | 459 | + | 0.546841 | |
| soxS | transcriptional activator of superoxide response regulon | RecName: Full=Regulatory protein SoxS; | chromosome | CDS | 4503970 | 324 | - | 0.515432 | |
| spoT | (p)ppGpp synthetase II | SubName: Full=(P)ppGpp synthetase II; EC=3.1.7.2; | chromosome | CDS | 3934070 | 2112 | + | 0.537405 | |
| sprB | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3010967 | 756 | - | 0.453704 | |
| srlR | transcriptional repressor for glucitol operon | SubName: Full=Transcriptional repressor for glucitol operon; | chromosome | CDS | 2981637 | 774 | + | 0.498708 | |
| srmB | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2782903 | 1335 | + | 0.543071 | |
| ssrB | secretion system regulator: transcriptonal activator | SubName: Full=Secretion system regulator: transcriptonal activator; | chromosome | CDS | 1476167 | 639 | - | 0.395931 | |
| tctD | tricarboxylic transport regulatory protein | RecName: Full=Transcriptional regulatory protein tctD; | chromosome | CDS | 2933761 | 675 | - | 0.54963 | |
| tdcA | transcriptional activator of tdc operon | SubName: Full=Transcriptional activator of tdc operon; | chromosome | CDS | 3412473 | 939 | - | 0.447284 | |
| torR | response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor) | SubName: Full=Response regulator in multi-component regualtory system wtih TorS (Sensory kinase) and TorT (Periplasmic sensor); | chromosome | CDS | 4024667 | 693 | + | 0.558442 | |
| treR | transcriptional repressor of treABC | RecName: Full=HTH-type transcriptional regulator TreR; AltName: Full=Trehalose operon repressor; | chromosome | CDS | 4698357 | 948 | - | 0.562236 | |
| trpR | transcriptional repressor for trp operon and aroH | RecName: Full=Trp operon repressor; | chromosome | CDS | 4841030 | 327 | + | 0.550459 | |
| ttk | putative TetR/ArcR family transcriptional regulator | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 3925285 | 597 | + | 0.515913 | |
| tyrR | transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport | RecName: Full=Transcriptional regulatory protein TyrR; | chromosome | CDS | 1776180 | 1542 | - | 0.535668 | |
| uhpA | response regulator (repressor) in two-component regulatory system wtih UhpB | RecName: Full=Transcriptional regulatory protein UhpA; | chromosome | CDS | 3990554 | 591 | - | 0.58714 | |
| umuD | error-prone repair: SOS-response transcriptional repressor | RecName: Full=Protein UmuD; EC=3.4.21.-; Contains: RecName: Full=Protein UmuD; | chromosome | CDS | 2081163 | 420 | - | 0.502381 | |
| uvrY | putative LuxR/UhpA family response regulator | SubName: Full=Putative LuxR/UhpA family response regulator; | chromosome | CDS | 2038247 | 657 | - | 0.51446 | |
| uxuR | transcriptional repressor for uxu operon | SubName: Full=Transcriptional repressor for uxu operon; | chromosome | CDS | 4761052 | 774 | + | 0.546512 | |
| vacB | putative exoribonuclease | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 4611064 | 2439 | + | 0.552685 | |
| xapR | regulator for XapA | SubName: Full=Regulator for XapA; | chromosome | CDS | 2532394 | 885 | - | 0.502825 | |
| xylR | xylose operon regulatory protein | SubName: Full=Xylose operon regulatory protein; | chromosome | CDS | 3848152 | 1179 | + | 0.527566 | |
| yafC | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 295893 | 915 | - | 0.51694 | |
| yajF | putative sugar kinase/putative transcriptional regulator (NagC/XylR family) | SubName: Full=Putative sugar kinase/putative transcriptional regulator (NagC/XylR family); | chromosome | CDS | 443966 | 909 | + | 0.580858 | |
| ybaD | putative transcriptional regulator | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 469391 | 450 | + | 0.5 | |
| ybaO | putative transcriptional regulator (AsnC family) | SubName: Full=Putative transcriptional regulator (AsnC family); | chromosome | CDS | 516267 | 459 | + | 0.522876 | |
| ybbS | putative LysR family transcriptional regulator | RecName: Full=HTH-type transcriptional activator AllS; | chromosome | CDS | 574850 | 927 | - | 0.535059 | |
| ybdM | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 666052 | 618 | - | 0.514563 | |
| ybdO | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 668043 | 903 | - | 0.389812 | |
| ybeF | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 696033 | 954 | - | 0.509434 | |
| ybiH | putative transcriptional repressor (TetR/AcrR family) | SubName: Full=Putative transcriptional repressor (TetR/AcrR family); | chromosome | CDS | 884682 | 675 | - | 0.531852 | |
| yccR | putative DNA transformation protein | SubName: Full=Putative DNA transformation protein; | chromosome | CDS | 1163100 | 606 | + | 0.50165 | |
| ycdC | putative transcriptional repressor (TetR/AcrR family) | SubName: Full=Putative transcriptional repressor (TetR/AcrR family); | chromosome | CDS | 1206508 | 639 | + | 0.544601 | |
| ycfQ | putative transcriptional repressor (TetR/AcrR family) | SubName: Full=Putative transcriptional repressor (TetR/AcrR family); | chromosome | CDS | 1296551 | 636 | - | 0.534591 | |
| ycfX | putative regulator (NagC/XylR family) | RecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; | chromosome | CDS | 1305845 | 912 | + | 0.563596 | |
| yciT | putative deoR family regulatory protein | SubName: Full=Putative deoR family regulatory protein; | chromosome | CDS | 1798912 | 753 | + | 0.50332 | |
| ydcI | putative LysR family transcriptional regulators | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 1714895 | 924 | + | 0.546537 | |
| ydcN | putative oxidoreductase | SubName: Full=Putative oxidoreductase; | chromosome | CDS | 1695679 | 537 | - | 0.528864 | |
| ydcR | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 1688394 | 1425 | - | 0.53193 | |
| ydeW | putative transcriptional repressor | RecName: Full=Transcriptional regulator LsrR; | chromosome | CDS | 4282286 | 960 | - | 0.503125 | |
| ydfH | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 1587986 | 687 | - | 0.50655 | |
| ydhB | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 1506991 | 933 | + | 0.574491 | |
| ydhM | putative TetR/AcrR family transcriptional repressor | SubName: Full=Putative TetR/AcrR family transcriptional repressor; | chromosome | CDS | 1514082 | 600 | - | 0.553333 | |
| ydiP | putative transcription regulator, AraC family | SubName: Full=Putative transcription regulator, AraC family; | chromosome | CDS | 1435737 | 891 | + | 0.426487 | |
| yeaM | putative regulator (AraC/XylS family) | SubName: Full=Putative regulator (AraC/XylS family); | chromosome | CDS | 1356188 | 795 | + | 0.557233 | |
| yebK | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1981484 | 870 | + | 0.513793 | |
| yeeY | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2147471 | 915 | - | 0.525683 | |
| yegW | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 2239479 | 747 | - | 0.53012 | |
| yehT | putative regulator | RecName: Full=Transcriptional regulatory protein YehT; | chromosome | CDS | 2253744 | 720 | - | 0.506944 | |
| yehV | putative transcriptional repressor (MerR family) | RecName: Full=HTH-type transcriptional regulator mlrA; AltName: Full=MerR-like regulator A; | chromosome | CDS | 2256368 | 732 | + | 0.543716 | |
| yeiE | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2300547 | 864 | - | 0.546296 | |
| yejH | putative ATP-dependent helicase | SubName: Full=Putative ATP-dependent helicase; | chromosome | CDS | 2324548 | 1761 | + | 0.570131 | |
| yfaX | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2399433 | 783 | - | 0.514687 | |
| yfeR | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2536770 | 927 | - | 0.566343 | |
| yfhH | putative ABC superfamily transport protein | SubName: Full=Putative ABC superfamily transport protein; | chromosome | CDS | 2717588 | 849 | + | 0.572438 | |
| yfhP | hypothetical protein | RecName: Full=HTH-type transcriptional regulator IscR; | chromosome | CDS | 2682931 | 495 | - | 0.559596 | |
| yfiE | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 2784255 | 900 | - | 0.513333 | |
| ygaA | putative EBP family regulator | RecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; | chromosome | CDS | 2983365 | 1521 | - | 0.593688 | |
| ygaE | putative GntR family transcriptional repressor | SubName: Full=Putative GntR family transcriptional repressor; | chromosome | CDS | 2944452 | 678 | + | 0.567847 | |
| ygbI | putative regulatory protein, deoR family | SubName: Full=Putative regulatory protein, deoR family; | chromosome | CDS | 3061824 | 765 | + | 0.556863 | |
| ygiX | putative transcriptional regulator | RecName: Full=Transcriptional regulatory protein QseB; | chromosome | CDS | 3340798 | 660 | + | 0.562121 | |
| yhaJ | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3400012 | 897 | - | 0.565217 | |
| yhcK | putative gntR family regulatory protein | RecName: Full=Transcriptional regulator NanR; | chromosome | CDS | 3509147 | 792 | - | 0.522727 | |
| yhcS | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3533298 | 930 | + | 0.535484 | |
| yhgF | putative RNase R | SubName: Full=Putative RNase R; | chromosome | CDS | 3661126 | 2328 | + | 0.58634 | |
| yhhK | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3733924 | 384 | + | 0.557292 | |
| yhhY | putative transferase | SubName: Full=Putative transferase; | chromosome | CDS | 3715617 | 489 | + | 0.543967 | |
| yhjB | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3779468 | 603 | - | 0.482587 | |
| yhjC | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 3780701 | 900 | + | 0.535556 | |
| yiaC | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3829911 | 441 | + | 0.517007 | |
| yiaG | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3835860 | 291 | + | 0.453608 | |
| yiaJ | IclR family transcriptional repressor | SubName: Full=IclR family transcriptional repressor; | chromosome | CDS | 3854609 | 801 | - | 0.525593 | |
| yidZ | putative LysR family transcriptional regulator | RecName: Full=HTH-type transcriptional regulator YidZ; | chromosome | CDS | 4055233 | 960 | + | 0.540625 | |
| yieP | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 4098947 | 705 | - | 0.512057 | |
| yifA | putative LysR family transcriptional regulator | RecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; | chromosome | CDS | 4105545 | 849 | - | 0.515901 | |
| yihW | putative glycerol-3-phosphate regulon repressor | SubName: Full=Putative glycerol-3-phosphate regulon repressor; | chromosome | CDS | 4235755 | 804 | + | 0.541045 | |
| yiiD | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4238645 | 990 | + | 0.544444 | |
| yijC | putative TetR/AcrR family transcriptional repressor | RecName: Full=HTH-type transcriptional repressor FabR; | chromosome | CDS | 4345579 | 636 | + | 0.551887 | |
| yijO | putative AraC/XylS family regulator | SubName: Full=Putative AraC/XylS family regulator; | chromosome | CDS | 4332297 | 852 | - | 0.56338 | |
| yjaB | putative acetyltransferase | RecName: Full=Uncharacterized N-acetyltransferase YjaB; EC=2.3.1.-; | chromosome | CDS | 4400247 | 438 | - | 0.486301 | |
| yjdC | putative merR family bacterial regulatory protein | SubName: Full=Putative merR family bacterial regulatory protein; | chromosome | CDS | 4566770 | 576 | - | 0.515625 | |
| yjeB | putative negative regulator | RecName: Full=HTH-type transcriptional repressor NsrR; | chromosome | CDS | 4610601 | 426 | + | 0.488263 | |
| yjfJ | putative phage shock protein A | SubName: Full=Putative phage shock protein A; | chromosome | CDS | 4614875 | 699 | + | 0.543634 | |
| yjfQ | putative transcriptional repressor | RecName: Full=HTH-type transcriptional regulator UlaR; | chromosome | CDS | 4622946 | 756 | - | 0.53836 | |
| yjgM | putative acetyltransferase | RecName: Full=Uncharacterized N-acetyltransferase YjgM; EC=2.3.1.-; | chromosome | CDS | 4714986 | 504 | - | 0.531746 | |
| yjiE | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 4765066 | 909 | - | 0.523652 | |
| yjjQ | putative LuxR/UhpA family transcriptional regulator | SubName: Full=Putative LuxR/UhpA family transcriptional regulator; | chromosome | CDS | 4806117 | 726 | + | 0.436639 | |
| yncC | putative gntR family regulatory protein | SubName: Full=Putative gntR family regulatory protein; | chromosome | CDS | 1676097 | 666 | - | 0.46997 | |
| yneJ | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 1600208 | 873 | - | 0.569301 | |
| ynfL | putative LysR family transcriptional regulator | SubName: Full=Putative LysR family transcriptional regulator; | chromosome | CDS | 1564074 | 900 | + | 0.571111 | |
| yoaA | putative DNA helicase | SubName: Full=Putative DNA helicase; | chromosome | CDS | 1918518 | 1911 | - | 0.564103 | |
| yqgE | putative transcriptional regulator | RecName: Full=UPF0301 protein YqgE; | chromosome | CDS | 3258102 | 564 | + | 0.524823 | |
| yqhC | putative AraC/XylS family transcriptional regulator | SubName: Full=Putative AraC/XylS family transcriptional regulator; | chromosome | CDS | 3323045 | 918 | - | 0.510893 | |
| yqjI | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3380158 | 648 | + | 0.535494 | |
| yrbA | putative BolA family transcriptional regulator | SubName: Full=Putative BolA family transcriptional regulator; | chromosome | CDS | 3476208 | 294 | - | 0.496599 | |
| ytfH | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4639116 | 387 | + | 0.565891 | |
| zntR | Zn(II)-responsive transcriptional regulator | SubName: Full=Zn(II)-responsive transcriptional regulator; | chromosome | CDS | 3581965 | 426 | - | 0.5 | |
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