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2024-04-30 02:26:09

Gene list

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COG category: Transcription
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 349

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
STM0014 putative LysR family transcriptional regulatorchromosome CDS15014 948 + 0.406118
STM0017 putative proteinchromosome CDS17043 444 - 0.382883
STM0029 putative transcription regulatorchromosome CDS32545 450 - 0.371111
STM0030 putative LysR family transcriptional regulatorchromosome CDS33364 1005 + 0.38806
STM0031 putative transcription regulatorchromosome CDS34376 441 - 0.358277
STM0052 putative transcription regulator sensor for citratechromosome CDS61106 687 - 0.486172
STM0164 putative LysR family transcriptional regulatorchromosome CDS193404 768 + 0.550781
STM0333 putative LysR family transcriptional regulatorchromosome CDS376663 966 + 0.490683
STM0344 putative response regulatorchromosome CDS388783 744 + 0.408602
STM0347 putative response regulatorchromosome CDS391056 642 + 0.397196
STM0354 putative transcriptional regulatorchromosome CDS400860 465 + 0.544086
STM0363 putative transcription regulator, AraC familychromosome CDS411513 1005 + 0.5801
STM0410 putative regulatory proteinchromosome CDS465699 693 + 0.528139
STM0563 putative transcriptional regulator (AraC/XylS family)chromosome CDS619258 855 - 0.582456
STM0571 putative inner membrane proteinchromosome CDS629330 2730 + 0.516117
STM0580 putative regulatory proteinchromosome CDS638146 582 - 0.527491
STM0581 putative regulatory proteinchromosome CDS639016 342 + 0.5
STM0652 putative sigma-54 dependent transcriptional regulatorchromosome CDS714545 1929 + 0.500778
STM0692 putative LysR family transcriptional regulatorchromosome CDS755353 927 - 0.562028
STM0763 transcriptional regulator, lysR familychromosome CDS826492 852 + 0.352113
STM0764 transcriptional regulator, lysR familychromosome CDS827344 984 - 0.395325
STM0835 putative Mn-dependent transcriptional regulator.chromosome CDS902271 474 + 0.529536
STM0859 putative LysR family transcriptional regulatorchromosome CDS932023 891 - 0.401796
STM0898 predicted Fels-1 prophage transcriptional regulatorchromosome CDS967911 696 - 0.425287
STM0898A Fels-1 prophage proteinchromosome CDS968719 255 + 0.482353
STM0900 putative Fels-1 prophage DNA or RNA helicases of superfamily IIchromosome CDS969999 1584 + 0.52904
STM0952 putative transcriptional regulator, lysR familychromosome CDS1029345 912 + 0.578947
STM1001 putative leucine response regulatorchromosome CDS1093080 462 - 0.489177
STM1012 Gifsy-2 prophage putative regulatory proteinchromosome CDS1105050 411 - 0.469586
STM1016 Gifsy-2 prophage proteinchromosome CDS1107990 348 + 0.543103
STM1082 AraC family bacterial regulatory proteinchromosome CDS1172746 780 + 0.538462
STM1127 putative transcriptional regulatorchromosome CDS1215275 882 - 0.492063
STM1243 homology with cold shock proteinschromosome CDS1330832 213 - 0.474178
STM1265 putative response regulatorschromosome CDS1347529 594 + 0.360269
STM1266 putative transcriptional regulatorchromosome CDS1348191 849 + 0.462898
STM1541 putative gntR family regulatory proteinchromosome CDS1616470 792 + 0.47096
STM1547 putative marR-family transcriptional regulatorchromosome CDS1624193 489 + 0.486708
STM1555 putative transcriptional regulatorchromosome CDS1632130 1008 + 0.539683
STM1575 putative transcriptional regulator, TetR familychromosome CDS1658415 579 + 0.571675
STM1618 putative DeoR family transcriptional repressor of sgc operonchromosome CDS1706567 792 + 0.518939
STM1619 cryptic aminoglycoside resistance genechromosome CDS1707358 438 + 0.518265
STM1664 putative transcriptional regulatorchromosome CDS1757889 603 - 0.517413
STM1671 putative bacterial regulatory helix-turn-helix proteins, araC familychromosome CDS1764396 858 + 0.38345
STM1674 putative AraC family bacterial regulatory helix-turn-helix proteinchromosome CDS1767332 591 - 0.573604
STM1677 putative LysR family transcriptional regulatorchromosome CDS1769947 906 - 0.547461
STM1857 putative acetyltransferasechromosome CDS1955007 420 - 0.428571
STM1873 putative periplasmic or exported proteinchromosome CDS1968296 354 - 0.533898
STM2180 putative LysR family transcriptional regulatorchromosome CDS2276882 909 + 0.548955
STM2195 putative transcriptional regulatorchromosome CDS2292287 390 - 0.515385
STM2230 putative peptidasechromosome CDS2330961 504 - 0.511905
STM2275 putative gntR family regulatory proteinchromosome CDS2379349 885 + 0.359322
STM2281 putative LysR family transcriptional regulatorchromosome CDS2386536 879 + 0.480091
STM2345 putative transcriptional regulatorchromosome CDS2457383 1020 + 0.556863
STM2361 putative regulatory proteinchromosome CDS2472873 1428 + 0.521008
STM2374 putatiave helix-turn-helix regulatory proteinchromosome CDS2486498 249 + 0.46988
STM2575 putative LysR family transcriptional regulatorchromosome CDS2720726 927 + 0.429342
STM2624 Gifsy-1 prophage proteinchromosome CDS2766750 348 - 0.543103
STM2628 Gifsy-1 prophage proteinchromosome CDS2769627 411 + 0.469586
STM2727 Fels-2 prophage proteinchromosome CDS2869683 306 - 0.45098
STM2738 Fels-2 prophage proteinchromosome CDS2876179 633 + 0.4297
STM2744 putative cytoplasmic proteinchromosome CDS2883250 216 + 0.555556
STM2748 putative transcriptional regulatorchromosome CDS2888373 357 - 0.462185
STM2749 putative cytoplasmic proteinchromosome CDS2888824 285 + 0.568421
STM2797 putative arsR family regulatory proteinchromosome CDS2946041 300 + 0.513333
STM2803 putative gntR family regulatory proteinchromosome CDS2949731 1335 - 0.566292
STM2905 putative acetyltransferasechromosome CDS3047619 528 + 0.473485
STM2912 putative LysR family transcriptional regulatorschromosome CDS3054575 933 + 0.550911
STM2920 putative transcriptional regulatorchromosome CDS3062607 405 - 0.525926
STM2955 putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domainchromosome CDS3102440 357 - 0.456583
STM3012 putative transcriptional regulatorchromosome CDS3171663 1023 + 0.57869
STM3020 putative LysR family transcriptional regulatorchromosome CDS3180959 864 - 0.545139
STM3084 putative gntR family regulatory proteinchromosome CDS3247098 801 - 0.44819
STM3098 putative transcriptional regulatorchromosome CDS3259128 687 - 0.572052
STM3121 putative LysR family transcriptional regulatorchromosome CDS3279660 879 + 0.52446
STM3124 putative response regulatorchromosome CDS3284090 684 + 0.44883
STM3175 putative bacterial regulatory helix-turn-helix proteinschromosome CDS3339316 867 - 0.580161
STM3262 transcriptional regulator of sugar metabolismchromosome CDS3431469 774 + 0.503876
STM3357 putative gntR family regulatory proteinchromosome CDS3525275 666 - 0.496997
STM3358 putative gntR family regulatory proteinchromosome CDS3525927 630 - 0.490476
STM3533 putative bacterial transcriptional regulatorchromosome CDS3697979 756 - 0.505291
STM3547 putative transcriptional regulator of sugar metabolismchromosome CDS3716370 1215 + 0.413992
STM3602 putative gntR family regulatory proteinchromosome CDS3774529 720 - 0.493056
STM3633 putative bacterial regulatory proteinschromosome CDS3819242 1008 + 0.603175
STM3651 putative acetyltransferasechromosome CDS3837736 486 - 0.489712
STM3653 putative acetyltransferasechromosome CDS3838674 468 - 0.416667
STM3678 putative bacterial regulatory helix-turn-helix proteinschromosome CDS3864821 816 - 0.544118
STM3681 putative transcriptional regulatorchromosome CDS3869680 882 + 0.568027
STM3696 putative transcriptional regulatorchromosome CDS3890132 1005 - 0.552239
STM3736 putative LysR family transcriptional regulatorchromosome CDS3928434 903 - 0.527132
STM3773 putative NtrC family transcriptional regulatorchromosome CDS3972549 2799 - 0.549125
STM3778 putative helix-turn-helix proteinchromosome CDS3979137 324 + 0.481481
STM3785 putative gntR family regulatory proteinchromosome CDS3984439 744 - 0.408602
STM3794 putative deoR family regulatory proteinchromosome CDS3994836 786 + 0.520356
STM3834 putative LysR family transcriptional regulatorchromosome CDS4037940 897 + 0.534002
STM4033 putative merR family bacterial regulatory proteinchromosome CDS4241984 255 + 0.470588
STM4042A hypothetical proteinchromosome CDS4252841 567 + 0.587302
STM4068 putative gntR family regulatory proteinchromosome CDS4279021 723 + 0.510373
STM4270 putative LysR family transcriptional regulatorchromosome CDS4509386 888 - 0.560811
STM4314 putative luxR family bacterial regulatory proteinschromosome CDS4560598 288 - 0.298611
STM4315 putative AraC-type DNA-binding domain-containing proteinchromosome CDS4560882 876 - 0.353881
STM4318 putative acetyltransferasechromosome CDS4562850 492 + 0.571138
STM4320 putative merR family bacterial regulatory proteinchromosome CDS4565999 333 + 0.477477
STM4417 putative transcriptional regulatorchromosome CDS4658541 834 + 0.482014
STM4423 putative AraC-type DNA-binding domain-containing proteinchromosome CDS4665886 825 + 0.441212
STM4440 putative cytoplasmic proteinchromosome CDS4683942 339 + 0.548673
STM4448 putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)chromosome CDS4689457 1914 + 0.541275
STM4463 putative arginine repressorchromosome CDS4705132 489 - 0.478528
STM4497 putative cytoplasmic proteinchromosome CDS4750638 603 - 0.497512
STM4534 putative NtrC family transcriptional regulator, ATPase domainchromosome CDS4792067 2766 + 0.547722
acrR acrAB operon repressor (TetR/AcrR family)chromosome CDS533754 654 + 0.46789
adiY transcriptional activator of adiAchromosome CDS4537638 762 - 0.434383
agaR aga operon transcriptional repressorchromosome CDS3421438 834 - 0.517986
allR putative regulatory proteinchromosome CDS576564 819 + 0.549451
araC transcriptional regulator (AraC/XylS family) for ara operonchromosome CDS121640 846 + 0.539007
arcA response regulator (OmpR family) in two-component regulatory system with ArcB (or CpxA)chromosome CDS4855370 717 - 0.524407
argR repressor of arg regulonchromosome CDS3528028 471 + 0.496815
asnC transcriptional regulator for asnA, gidAchromosome CDS4084699 459 - 0.507625
baeR response regulator in two-component regulatory system with BaeSchromosome CDS2224537 723 + 0.538036
basR response regulator in two-component regulatory system with BasSchromosome CDS4533719 669 - 0.539611
bglJ transcriptional regulator (activator) of bgl operonchromosome CDS4806803 675 + 0.49037
cadC transcriptional activator of cad operonchromosome CDS2696631 1545 + 0.476375
cdaR putative inner membrane proteinchromosome CDS246072 1158 + 0.556995
celD transcriptional repressor of cel operonchromosome CDS1393977 843 + 0.430605
cobB putative nicotinate-nucleotide dimethylbenzimidazolephosphoribosltransferasechromosome CDS1306775 822 + 0.529197
copR Copper resistance transcriptional regulatory proteinchromosome CDS1183637 747 - 0.500669
cpxR response reguator in two-component regulatory system with CpxAchromosome CDS4269746 699 - 0.546495
creB response regulator in two-component regulatory system with CreCchromosome CDS4844233 690 + 0.581159
csgD putative transcriptional regulatorchromosome CDS1229728 651 - 0.407066
csiE stationary phase inducible proteinchromosome CDS2691074 1278 + 0.549296
cspA major cold shock protein 7.4chromosome CDS3836439 213 + 0.474178
cspB putative cold-shock proteinchromosome CDS2079225 213 - 0.41784
cspC cold shock proteinchromosome CDS1935547 210 - 0.471429
cspD similar to CspA but not cold shock inducedchromosome CDS1021802 222 - 0.518018
cspE RNA chaperone, negative regulator of cspA transcriptionchromosome CDS692915 210 + 0.438095
cueR putative heavy metal transcriptional repressor (MerR family)chromosome CDS560556 417 + 0.522782
cysB transcriptional regulator for cysteine regulonchromosome CDS1808407 975 - 0.518974
cytR GalR/LacI family transcriptional repressorchromosome CDS4302181 1026 - 0.534113
dbpA ATP-dependent RNA helicasechromosome CDS1748288 1374 - 0.55313
dcuR response regulator in two-component regulatory system with DcuSchromosome CDS4549177 720 - 0.4875
deaD cysteine sulfinate desulfinasechromosome CDS3446185 1941 - 0.579083
deoR transcriptional repressor for deoxyribose operon (DeoR family)chromosome CDS936744 759 - 0.519104
dgoR galactonate operon transcriptional repressorchromosome CDS4033255 690 - 0.536232
dinG LexA regulated (SOS) repair enzymechromosome CDS887158 2145 + 0.549184
dpiA response regulator in two-component regulatory system with DpiBchromosome CDS689657 681 + 0.537445
dsdC LysR family transcriptional activatorchromosome CDS4001949 924 - 0.530303
ecnR putative luxR family bacterial regulatory proteinchromosome CDS4580656 588 - 0.465986
emrR transcriptional repressor of emrAB operonchromosome CDS2961121 531 + 0.487759
envR transcriptional repressor for envCD (acrEF)chromosome CDS3560028 663 - 0.432881
eutR putative regulator ethanolamine operonchromosome CDS2564060 1053 - 0.54321
fadR negative regulator of fad regulonchromosome CDS1905889 720 - 0.525
fimW putative fimbrial proteinchromosome CDS612706 597 - 0.420436
fimZ fimbrial protein Zchromosome CDS610256 633 - 0.410742
fis site-specific DNA inversion stimulation factorchromosome CDS3556262 297 + 0.464646
flgM anti-FliA factorchromosome CDS1257046 294 - 0.517007
fliA sigma F (sigma 28) factor of RNA polymerasechromosome CDS2044747 720 - 0.547222
fruR transcriptional repressor of fru operon and otherschromosome CDS138337 1005 + 0.564179
fucR positive regulator of the fuc operonchromosome CDS3131996 711 + 0.49789
galR transcriptional repressor of galETK operonchromosome CDS3170624 1029 + 0.558795
galS GalR/LacI family transcriptional repressor of mgl operonchromosome CDS2288115 1023 - 0.557185
gcvA regulator of gcv operonchromosome CDS3134272 918 - 0.509804
glpR transcriptional repressor of the glp operonchromosome CDS3686448 759 - 0.538867
gntR transcriptional repressor gnt-Ichromosome CDS3712167 996 - 0.573293
greA transcription elongation factorchromosome CDS3467930 477 - 0.513627
greB transcription elongation factor and transcript cleavagechromosome CDS3660551 474 + 0.514768
gutM putative glucitol (srl) operon regulatory proteinchromosome CDS2981080 360 + 0.55
hepA RNA polymerase associated proteinchromosome CDS110002 2907 - 0.570003
hilA invasion genes transcription activatorchromosome CDS3019856 1662 + 0.431408
hilC araC family bacterial regulatory helix-turn-helix proteinchromosome CDS3012107 888 - 0.370495
hilD regulatory helix-turn-helix proteins, araC familychromosome CDS3017836 930 + 0.409677
hpaA 4-hydroxyphenylacetate catabolism proteinchromosome CDS1195422 897 + 0.520624
hpaR 4-hydroxyphenylacetate catabolism proteinchromosome CDS1187506 441 - 0.521542
hutC histidine utilization repressorchromosome CDS854047 726 + 0.568871
hypB hydrogenase-3 accessory proteinchromosome CDS3000223 873 + 0.573883
iciA inhibitor of replication initiationchromosome CDS3225590 894 + 0.579418
iclR acetate operon transcriptional repressorchromosome CDS4407211 825 - 0.58303
idnR L-idonate regulatorchromosome CDS4724731 999 - 0.503504
ilvY positive LysR family regulator for ilvCchromosome CDS4116326 888 - 0.601351
invF invasion proteinchromosome CDS3043282 651 - 0.459293
kdgR putative IclR family transcriptional repressorchromosome CDS1937671 792 - 0.494949
kdpE response regulator in two-component regulatory system with KdpDchromosome CDS766339 678 - 0.563422
leuO putative LysR family transcriptional regulatorchromosome CDS134569 945 + 0.480423
lexA SOS response regulatorchromosome CDS4459249 609 + 0.550082
lldR putative transcriptional GntR family regulator for lct operonchromosome CDS3887564 777 + 0.574003
lrhA LysR family NADH dehydrogenase transcriptional repressorchromosome CDS2440125 939 - 0.529287
lrp regulator for lrp regulon and high-affinity branched-chain amino acid transport systemchromosome CDS1036742 495 + 0.490909
lysR positive LysR family transcriptional regulatorchromosome CDS3174075 936 + 0.58547
malT transcriptional activator of the mal geneschromosome CDS3676900 2706 + 0.554693
marA AraC/XylS family transcriptional activator of defense systemschromosome CDS1597094 435 - 0.455172
marR transcriptional repressor of marRAB operonchromosome CDS1597497 435 - 0.482759
melR regulator of melibiose operonchromosome CDS4541197 933 - 0.523044
metJ transcriptional repressor of all met genes but metFchromosome CDS4309131 318 - 0.515723
metR regulator for metE and metHchromosome CDS4168560 954 - 0.584906
mfd transcription-repair coupling factorchromosome CDS1298895 3447 - 0.570641
mlc transcriptional repressor of ptsG and ptsHIchromosome CDS1565101 1221 + 0.519247
mtlR repressor for mtlchromosome CDS3878549 591 + 0.534687
nagC transcriptional repressor of nag (N-acetylglucosamine) operon (NagC/XylR family)chromosome CDS741692 1221 - 0.533989
nanK putative ManNAc kinasechromosome CDS3504905 876 - 0.597032
narL response regulator in two-component regulatory system with NarX (or NarQ)chromosome CDS1866071 651 + 0.537634
narP response regulator in two-component regulatory system with NarQ (or NarX)chromosome CDS2346702 648 + 0.526235
nhaR transcriptional activator of nhaAchromosome CDS47418 900 + 0.505556
nikR nickel-responsive transcriptional regulatorchromosome CDS3751343 402 + 0.549751
nlp regulatory factor of maltose metabolismchromosome CDS3474550 288 + 0.493056
nusA L factorchromosome CDS3456313 1503 - 0.525615
nusB transcription termination; L factorchromosome CDS471527 420 + 0.528571
nusG component in transcription antiterminationchromosome CDS4362402 546 + 0.543956
ompR response regulator in two-component regulatory system with EnvZchromosome CDS3659606 720 - 0.556944
orf242 putative regulatory proteins, merR familychromosome CDS1475260 729 - 0.539095
orf408 putative regulatory protein, deoR familychromosome CDS1464806 1227 - 0.458028
oxyR regulatory protein sensor for oxidative stresschromosome CDS4343080 918 + 0.565359
pdhR transcriptional repressor for pyruvate dehydrogenase complex (GntR family)chromosome CDS175316 765 + 0.564706
pduD propanediol utilization dehydratase, medium subunitchromosome CDS2119633 675 + 0.57037
phnO putative regulator in phn operonchromosome CDS4529018 465 - 0.494624
phnR 2-aminoethylphosphonate transport, repressorchromosome CDS483349 720 - 0.590278
phoB response regulator in two-component regulatory system with PhoR (or CreC)chromosome CDS450795 690 + 0.546377
phoP response regulator in two-component regulatory system with PhoQchromosome CDS1318689 675 - 0.517037
pocR propanediol utilization proteinchromosome CDS2114399 912 - 0.45943
prpR regulator for prp operon (EBP family)chromosome CDS416087 1626 - 0.557196
pspA phage shock proteinchromosome CDS1781747 669 - 0.515695
pspC phage shock proteinchromosome CDS1781104 360 - 0.522222
pspF transcription activatorchromosome CDS1782586 981 + 0.543323
ptsJ putative gntR family regulatory proteinchromosome CDS2548503 1293 + 0.589327
purR transcriptional repressor for pur regulon, glyA, glnB, prsA, speA (GalR/LacI family)chromosome CDS1507920 1026 - 0.545809
rbsR transcriptional repressor for rbs operon (GalR/LacI family)chromosome CDS4096544 999 + 0.533534
rcsA positive transcriptional regulator of capsular/exo-polysaccharide synthesis (LuxR/UhpA family)chromosome CDS2067427 624 + 0.387821
rcsB LuxR/UhpA family response regulator in two-component regulatory system with RcsCchromosome CDS2369994 651 + 0.490015
recG DNA helicasechromosome CDS3936881 2082 + 0.585014
relA (p)ppGpp synthetase Ichromosome CDS3102880 2235 - 0.555705
rfaH transcriptional activatorchromosome CDS4182924 489 - 0.492843
rhaR positive regulator for rhaRS operonchromosome CDS4260054 849 + 0.497055
rhaS positive regulator for rhaBAD operonchromosome CDS4259065 837 + 0.537634
rhlB putative helicasechromosome CDS4123427 1266 - 0.547393
rhlE putative ATP-dependent RNA helicasechromosome CDS885586 1365 + 0.58315
rho transcription termination factor Rhochromosome CDS4125584 1260 + 0.528571
rnb RNase IIchromosome CDS1794346 1935 + 0.556072
rnc RNase III, ds RNAchromosome CDS2724827 681 - 0.528634
rnk regulator of nucleoside diphosphate kinasechromosome CDS679344 411 - 0.583942
rob transcriptional regulatorchromosome CDS4842666 870 - 0.54023
rof modulator of Rho-dependent transcription terminationchromosome CDS280047 261 - 0.43295
rpoA RNA polymerase, alpha subunitchromosome CDS3583301 990 - 0.521212
rpoB RNA polymerase, beta subunitchromosome CDS4365908 4029 + 0.54207
rpoC RNA polymerase, beta prime subunitchromosome CDS4370013 4224 + 0.546875
rpoD sigma D factor of RNA polymerasechromosome CDS3376266 1983 + 0.525971
rpoE sigma E (sigma 24 ) factor of RNA polymerasechromosome CDS2779428 576 - 0.508681
rpoH sigma H factor of RNA polymerasechromosome CDS3735927 855 - 0.538012
rpoN sigma N factor of RNA polymerasechromosome CDS3484410 1434 + 0.540446
rpoS sigma S (sigma 38) factor of RNA polymerasechromosome CDS3065494 993 - 0.524673
rpoZ RNA polymerase, omega subunitchromosome CDS3933776 276 + 0.536232
rsd regulator of sigma Dchromosome CDS4382750 489 - 0.496933
rstA response regulator in two-component regulatory system with RstB (OmpR family)chromosome CDS1551289 732 - 0.531421
rtcR sigma N (sigma 54)-dependent regulator of rtcBA expressionchromosome CDS3684868 1584 + 0.601641
sdiA transcriptional regulator of ftsQAZ gene clusterchromosome CDS2039658 723 - 0.49101
sinR transcriptional regulatorchromosome CDS348610 948 + 0.397679
slyA MarR family transcriptional regulator for hemolysinchromosome CDS1519880 441 + 0.485261
soxR redox-sensing transcriptional activator SoxRchromosome CDS4504380 459 + 0.546841
soxS transcriptional activator of superoxide response regulonchromosome CDS4503970 324 - 0.515432
spoT (p)ppGpp synthetase IIchromosome CDS3934070 2112 + 0.537405
sprB transcriptional regulatorchromosome CDS3010967 756 - 0.453704
srlR transcriptional repressor for glucitol operonchromosome CDS2981637 774 + 0.498708
srmB ATP-dependent RNA helicasechromosome CDS2782903 1335 + 0.543071
ssrB secretion system regulator: transcriptonal activatorchromosome CDS1476167 639 - 0.395931
tctD tricarboxylic transport regulatory proteinchromosome CDS2933761 675 - 0.54963
tdcA transcriptional activator of tdc operonchromosome CDS3412473 939 - 0.447284
torR response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor)chromosome CDS4024667 693 + 0.558442
treR transcriptional repressor of treABCchromosome CDS4698357 948 - 0.562236
trpR transcriptional repressor for trp operon and aroHchromosome CDS4841030 327 + 0.550459
ttk putative TetR/ArcR family transcriptional regulatorchromosome CDS3925285 597 + 0.515913
tyrR transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transportchromosome CDS1776180 1542 - 0.535668
uhpA response regulator (repressor) in two-component regulatory system wtih UhpBchromosome CDS3990554 591 - 0.58714
umuD error-prone repair: SOS-response transcriptional repressorchromosome CDS2081163 420 - 0.502381
uvrY putative LuxR/UhpA family response regulatorchromosome CDS2038247 657 - 0.51446
uxuR transcriptional repressor for uxu operonchromosome CDS4761052 774 + 0.546512
vacB putative exoribonucleasechromosome CDS4611064 2439 + 0.552685
xapR regulator for XapAchromosome CDS2532394 885 - 0.502825
xylR xylose operon regulatory proteinchromosome CDS3848152 1179 + 0.527566
yafC putative LysR family transcriptional regulatorchromosome CDS295893 915 - 0.51694
yajF putative sugar kinase/putative transcriptional regulator (NagC/XylR family)chromosome CDS443966 909 + 0.580858
ybaD putative transcriptional regulatorchromosome CDS469391 450 + 0.5
ybaO putative transcriptional regulator (AsnC family)chromosome CDS516267 459 + 0.522876
ybbS putative LysR family transcriptional regulatorchromosome CDS574850 927 - 0.535059
ybdM putative transcriptional regulatorchromosome CDS666052 618 - 0.514563
ybdO putative LysR family transcriptional regulatorchromosome CDS668043 903 - 0.389812
ybeF putative LysR family transcriptional regulatorchromosome CDS696033 954 - 0.509434
ybiH putative transcriptional repressor (TetR/AcrR family)chromosome CDS884682 675 - 0.531852
yccR putative DNA transformation proteinchromosome CDS1163100 606 + 0.50165
ycdC putative transcriptional repressor (TetR/AcrR family)chromosome CDS1206508 639 + 0.544601
ycfQ putative transcriptional repressor (TetR/AcrR family)chromosome CDS1296551 636 - 0.534591
ycfX putative regulator (NagC/XylR family)chromosome CDS1305845 912 + 0.563596
yciT putative deoR family regulatory proteinchromosome CDS1798912 753 + 0.50332
ydcI putative LysR family transcriptional regulatorschromosome CDS1714895 924 + 0.546537
ydcN putative oxidoreductasechromosome CDS1695679 537 - 0.528864
ydcR putative gntR family regulatory proteinchromosome CDS1688394 1425 - 0.53193
ydeW putative transcriptional repressorchromosome CDS4282286 960 - 0.503125
ydfH putative gntR family regulatory proteinchromosome CDS1587986 687 - 0.50655
ydhB putative LysR family transcriptional regulatorchromosome CDS1506991 933 + 0.574491
ydhM putative TetR/AcrR family transcriptional repressorchromosome CDS1514082 600 - 0.553333
ydiP putative transcription regulator, AraC familychromosome CDS1435737 891 + 0.426487
yeaM putative regulator (AraC/XylS family)chromosome CDS1356188 795 + 0.557233
yebK putative transcriptional regulatorchromosome CDS1981484 870 + 0.513793
yeeY putative LysR family transcriptional regulatorchromosome CDS2147471 915 - 0.525683
yegW putative gntR family regulatory proteinchromosome CDS2239479 747 - 0.53012
yehT putative regulatorchromosome CDS2253744 720 - 0.506944
yehV putative transcriptional repressor (MerR family)chromosome CDS2256368 732 + 0.543716
yeiE putative LysR family transcriptional regulatorchromosome CDS2300547 864 - 0.546296
yejH putative ATP-dependent helicasechromosome CDS2324548 1761 + 0.570131
yfaX putative transcriptional regulatorchromosome CDS2399433 783 - 0.514687
yfeR putative LysR family transcriptional regulatorchromosome CDS2536770 927 - 0.566343
yfhH putative ABC superfamily transport proteinchromosome CDS2717588 849 + 0.572438
yfhP hypothetical proteinchromosome CDS2682931 495 - 0.559596
yfiE putative LysR family transcriptional regulatorchromosome CDS2784255 900 - 0.513333
ygaA putative EBP family regulatorchromosome CDS2983365 1521 - 0.593688
ygaE putative GntR family transcriptional repressorchromosome CDS2944452 678 + 0.567847
ygbI putative regulatory protein, deoR familychromosome CDS3061824 765 + 0.556863
ygiX putative transcriptional regulatorchromosome CDS3340798 660 + 0.562121
yhaJ putative LysR family transcriptional regulatorchromosome CDS3400012 897 - 0.565217
yhcK putative gntR family regulatory proteinchromosome CDS3509147 792 - 0.522727
yhcS putative LysR family transcriptional regulatorchromosome CDS3533298 930 + 0.535484
yhgF putative RNase Rchromosome CDS3661126 2328 + 0.58634
yhhK putative acetyltransferasechromosome CDS3733924 384 + 0.557292
yhhY putative transferasechromosome CDS3715617 489 + 0.543967
yhjB putative transcriptional regulatorchromosome CDS3779468 603 - 0.482587
yhjC putative LysR family transcriptional regulatorchromosome CDS3780701 900 + 0.535556
yiaC putative acetyltransferasechromosome CDS3829911 441 + 0.517007
yiaG putative transcriptional regulatorchromosome CDS3835860 291 + 0.453608
yiaJ IclR family transcriptional repressorchromosome CDS3854609 801 - 0.525593
yidZ putative LysR family transcriptional regulatorchromosome CDS4055233 960 + 0.540625
yieP putative gntR family regulatory proteinchromosome CDS4098947 705 - 0.512057
yifA putative LysR family transcriptional regulatorchromosome CDS4105545 849 - 0.515901
yihW putative glycerol-3-phosphate regulon repressorchromosome CDS4235755 804 + 0.541045
yiiD putative acetyltransferasechromosome CDS4238645 990 + 0.544444
yijC putative TetR/AcrR family transcriptional repressorchromosome CDS4345579 636 + 0.551887
yijO putative AraC/XylS family regulatorchromosome CDS4332297 852 - 0.56338
yjaB putative acetyltransferasechromosome CDS4400247 438 - 0.486301
yjdC putative merR family bacterial regulatory proteinchromosome CDS4566770 576 - 0.515625
yjeB putative negative regulatorchromosome CDS4610601 426 + 0.488263
yjfJ putative phage shock protein Achromosome CDS4614875 699 + 0.543634
yjfQ putative transcriptional repressorchromosome CDS4622946 756 - 0.53836
yjgM putative acetyltransferasechromosome CDS4714986 504 - 0.531746
yjiE putative LysR family transcriptional regulatorchromosome CDS4765066 909 - 0.523652
yjjQ putative LuxR/UhpA family transcriptional regulatorchromosome CDS4806117 726 + 0.436639
yncC putative gntR family regulatory proteinchromosome CDS1676097 666 - 0.46997
yneJ putative LysR family transcriptional regulatorchromosome CDS1600208 873 - 0.569301
ynfL putative LysR family transcriptional regulatorchromosome CDS1564074 900 + 0.571111
yoaA putative DNA helicasechromosome CDS1918518 1911 - 0.564103
yqgE putative transcriptional regulatorchromosome CDS3258102 564 + 0.524823
yqhC putative AraC/XylS family transcriptional regulatorchromosome CDS3323045 918 - 0.510893
yqjI putative transcriptional regulatorchromosome CDS3380158 648 + 0.535494
yrbA putative BolA family transcriptional regulatorchromosome CDS3476208 294 - 0.496599
ytfH putative transcriptional regulatorchromosome CDS4639116 387 + 0.565891
zntR Zn(II)-responsive transcriptional regulatorchromosome CDS3581965 426 - 0.5